HEADER OXIDOREDUCTASE 31-MAR-09 3GWD TITLE CLOSED CRYSTAL STRUCTURE OF CYCLOHEXANONE MONOOXYGENASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYCLOHEXANONE MONOOXYGENASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.14.13.22; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODOCOCCUS SP.; SOURCE 3 ORGANISM_TAXID: 638919; SOURCE 4 STRAIN: HI-31; SOURCE 5 GENE: CHNB, CHNB1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FLAVOPROTEIN BIOCATALYSIS BAEYER-VILLIGER OXIDATION GREEN CHEMISTRY, KEYWDS 2 MONOOXYGENASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR I.A.MIRZA,B.J.YACHNIN,A.M.BERGHUIS REVDAT 6 06-SEP-23 3GWD 1 REMARK SEQADV REVDAT 5 07-FEB-18 3GWD 1 REMARK REVDAT 4 13-JUL-11 3GWD 1 VERSN REVDAT 3 07-JUL-09 3GWD 1 JRNL REVDAT 2 30-JUN-09 3GWD 1 SOURCE REVDAT 1 05-MAY-09 3GWD 0 JRNL AUTH I.A.MIRZA,B.J.YACHNIN,S.WANG,S.GROSSE,H.BERGERON,A.IMURA, JRNL AUTH 2 H.IWAKI,Y.HASEGAWA,P.C.LAU,A.M.BERGHUIS JRNL TITL CRYSTAL STRUCTURES OF CYCLOHEXANONE MONOOXYGENASE REVEAL JRNL TITL 2 COMPLEX DOMAIN MOVEMENTS AND A SLIDING COFACTOR JRNL REF J.AM.CHEM.SOC. V. 131 8848 2009 JRNL REFN ISSN 0002-7863 JRNL PMID 19385644 JRNL DOI 10.1021/JA9010578 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.53 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 23460 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2613 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.42 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3390 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.97 REMARK 3 BIN R VALUE (WORKING SET) : 0.2090 REMARK 3 BIN FREE R VALUE SET COUNT : 349 REMARK 3 BIN FREE R VALUE : 0.2910 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4173 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 127 REMARK 3 SOLVENT ATOMS : 149 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.90000 REMARK 3 B22 (A**2) : -0.70000 REMARK 3 B33 (A**2) : -0.20000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.387 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.255 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.178 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.129 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.920 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4427 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6056 ; 1.473 ; 1.973 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 532 ; 6.630 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 212 ;35.783 ;23.726 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 653 ;17.081 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;16.130 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 649 ; 0.106 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3436 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2110 ; 0.201 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2988 ; 0.309 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 256 ; 0.160 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 29 ; 0.163 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 8 ; 0.168 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2701 ; 0.547 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4249 ; 0.924 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2070 ; 1.495 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1806 ; 2.312 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 6 A 142 REMARK 3 ORIGIN FOR THE GROUP (A): -11.8088 10.8352 0.2114 REMARK 3 T TENSOR REMARK 3 T11: -0.1525 T22: -0.1298 REMARK 3 T33: -0.2293 T12: -0.0250 REMARK 3 T13: -0.0080 T23: 0.0508 REMARK 3 L TENSOR REMARK 3 L11: 1.9126 L22: 1.9638 REMARK 3 L33: 1.1135 L12: -0.1731 REMARK 3 L13: -0.0437 L23: -0.1647 REMARK 3 S TENSOR REMARK 3 S11: 0.0806 S12: 0.1327 S13: 0.0700 REMARK 3 S21: -0.2532 S22: 0.0528 S23: -0.1678 REMARK 3 S31: 0.0286 S32: 0.0133 S33: -0.1335 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 143 A 154 REMARK 3 ORIGIN FOR THE GROUP (A): -7.6421 0.4673 17.4909 REMARK 3 T TENSOR REMARK 3 T11: 0.0239 T22: -0.0057 REMARK 3 T33: -0.1414 T12: 0.0102 REMARK 3 T13: -0.0929 T23: 0.0652 REMARK 3 L TENSOR REMARK 3 L11: 0.5841 L22: 10.0572 REMARK 3 L33: 0.2585 L12: -2.4236 REMARK 3 L13: 0.3885 L23: -1.6123 REMARK 3 S TENSOR REMARK 3 S11: -0.8090 S12: -0.0356 S13: 0.0652 REMARK 3 S21: 0.3827 S22: 0.5589 S23: -0.2174 REMARK 3 S31: -0.3799 S32: 0.0852 S33: 0.2501 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 155 A 211 REMARK 3 ORIGIN FOR THE GROUP (A): -0.5186 -12.5982 13.5646 REMARK 3 T TENSOR REMARK 3 T11: -0.0532 T22: -0.0785 REMARK 3 T33: -0.0225 T12: 0.0042 REMARK 3 T13: -0.0605 T23: 0.0637 REMARK 3 L TENSOR REMARK 3 L11: 0.7313 L22: 3.5231 REMARK 3 L33: 2.8116 L12: -1.0999 REMARK 3 L13: 0.7644 L23: -0.9978 REMARK 3 S TENSOR REMARK 3 S11: 0.0343 S12: -0.0774 S13: -0.1437 REMARK 3 S21: -0.1153 S22: -0.0567 S23: -0.4008 REMARK 3 S31: 0.1979 S32: 0.3561 S33: 0.0225 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 212 A 251 REMARK 3 ORIGIN FOR THE GROUP (A): -25.8057 -8.7553 -4.9687 REMARK 3 T TENSOR REMARK 3 T11: 0.1680 T22: 0.0972 REMARK 3 T33: 0.0060 T12: -0.1426 REMARK 3 T13: -0.1787 T23: 0.0041 REMARK 3 L TENSOR REMARK 3 L11: 3.3031 L22: 3.1666 REMARK 3 L33: 2.1686 L12: -0.1688 REMARK 3 L13: 1.2448 L23: -1.8912 REMARK 3 S TENSOR REMARK 3 S11: -0.0727 S12: 0.6281 S13: -0.3570 REMARK 3 S21: -0.7695 S22: 0.1759 S23: 0.3181 REMARK 3 S31: 0.5138 S32: -0.2445 S33: -0.1032 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 252 A 385 REMARK 3 ORIGIN FOR THE GROUP (A): -17.5088 -18.9309 15.4213 REMARK 3 T TENSOR REMARK 3 T11: 0.0441 T22: -0.0299 REMARK 3 T33: 0.1377 T12: -0.0685 REMARK 3 T13: -0.0788 T23: 0.1529 REMARK 3 L TENSOR REMARK 3 L11: 1.7276 L22: 1.8009 REMARK 3 L33: 1.6721 L12: -1.0764 REMARK 3 L13: 1.2225 L23: -1.0263 REMARK 3 S TENSOR REMARK 3 S11: 0.0787 S12: -0.2211 S13: -0.6134 REMARK 3 S21: -0.2356 S22: 0.2567 S23: 0.4863 REMARK 3 S31: 0.3656 S32: -0.1903 S33: -0.3353 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 386 A 486 REMARK 3 ORIGIN FOR THE GROUP (A): -23.7161 14.2915 14.0318 REMARK 3 T TENSOR REMARK 3 T11: -0.1831 T22: -0.1139 REMARK 3 T33: -0.2119 T12: -0.0425 REMARK 3 T13: 0.0036 T23: 0.0490 REMARK 3 L TENSOR REMARK 3 L11: 2.6411 L22: 2.6362 REMARK 3 L33: 1.4049 L12: -0.0358 REMARK 3 L13: 0.4420 L23: -0.0261 REMARK 3 S TENSOR REMARK 3 S11: 0.0397 S12: -0.2659 S13: 0.1193 REMARK 3 S21: 0.1954 S22: 0.0167 S23: 0.2330 REMARK 3 S31: 0.0409 S32: -0.1829 S33: -0.0564 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 487 A 502 REMARK 3 ORIGIN FOR THE GROUP (A): -19.3026 -2.3737 23.2036 REMARK 3 T TENSOR REMARK 3 T11: 0.0307 T22: -0.0410 REMARK 3 T33: -0.1186 T12: -0.0198 REMARK 3 T13: -0.0330 T23: 0.1162 REMARK 3 L TENSOR REMARK 3 L11: 9.9963 L22: 4.9929 REMARK 3 L33: 10.1821 L12: 2.7650 REMARK 3 L13: 2.3600 L23: 1.6393 REMARK 3 S TENSOR REMARK 3 S11: 0.1042 S12: -0.7921 S13: -0.2355 REMARK 3 S21: 0.5684 S22: 0.5166 S23: 0.4775 REMARK 3 S31: 0.5840 S32: -0.3638 S33: -0.6208 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 503 A 535 REMARK 3 ORIGIN FOR THE GROUP (A): -31.7749 13.0779 10.2340 REMARK 3 T TENSOR REMARK 3 T11: -0.2558 T22: -0.0904 REMARK 3 T33: -0.1353 T12: -0.0246 REMARK 3 T13: -0.0034 T23: 0.1063 REMARK 3 L TENSOR REMARK 3 L11: 3.3138 L22: 6.1237 REMARK 3 L33: 3.1445 L12: -2.5781 REMARK 3 L13: 0.8047 L23: -2.1737 REMARK 3 S TENSOR REMARK 3 S11: 0.0907 S12: -0.1803 S13: 0.2036 REMARK 3 S21: -0.0036 S22: 0.0842 S23: 0.4466 REMARK 3 S31: -0.0051 S32: -0.4405 S33: -0.1749 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 541 A 541 REMARK 3 ORIGIN FOR THE GROUP (A): -12.7284 3.2474 6.6678 REMARK 3 T TENSOR REMARK 3 T11: 0.0208 T22: 0.0267 REMARK 3 T33: -0.0479 T12: -0.0350 REMARK 3 T13: -0.0475 T23: 0.0201 REMARK 3 L TENSOR REMARK 3 L11: 16.7979 L22: 6.6012 REMARK 3 L33: 4.1600 L12: 5.2742 REMARK 3 L13: 3.7891 L23: 2.0654 REMARK 3 S TENSOR REMARK 3 S11: -0.3817 S12: -0.2311 S13: -0.0914 REMARK 3 S21: -0.9162 S22: 0.2728 S23: 0.0339 REMARK 3 S31: -0.0289 S32: 0.1222 S33: 0.1088 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 542 A 542 REMARK 3 ORIGIN FOR THE GROUP (A): -12.4734 -7.8043 16.2294 REMARK 3 T TENSOR REMARK 3 T11: 0.0937 T22: 0.1193 REMARK 3 T33: 0.0778 T12: -0.0722 REMARK 3 T13: -0.0983 T23: 0.0984 REMARK 3 L TENSOR REMARK 3 L11: 3.6684 L22: 6.4069 REMARK 3 L33: 2.2402 L12: -3.5338 REMARK 3 L13: -1.6885 L23: 1.0824 REMARK 3 S TENSOR REMARK 3 S11: -0.3521 S12: -0.1539 S13: -0.4365 REMARK 3 S21: -0.5177 S22: 1.1618 S23: 0.5048 REMARK 3 S31: -0.0910 S32: -0.7887 S33: -0.8098 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3GWD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-APR-09. REMARK 100 THE DEPOSITION ID IS D_1000052389. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-APR-06 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH3R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23460 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 26.530 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1W4X REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM ACETATE TRIHYDRATE, 0.1 M REMARK 280 SODIUM CACODYLATE, PH 6.5 AND 30% PEG8000, VAPOR DIFFUSION REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.24250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.20400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.49450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.20400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.24250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 45.49450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 ALA A 3 REMARK 465 GLN A 4 REMARK 465 GLU A 536 REMARK 465 MET A 537 REMARK 465 VAL A 538 REMARK 465 THR A 539 REMARK 465 VAL A 540 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 263 CD GLU A 263 OE2 0.183 REMARK 500 GLU A 264 CG GLU A 264 CD 0.120 REMARK 500 GLU A 264 CD GLU A 264 OE1 0.111 REMARK 500 GLU A 264 CD GLU A 264 OE2 0.100 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 142 65.10 -114.17 REMARK 500 ASP A 288 14.81 -141.01 REMARK 500 ALA A 327 29.56 -144.52 REMARK 500 ALA A 379 53.10 -104.84 REMARK 500 VAL A 385 -70.31 74.45 REMARK 500 TRP A 406 53.99 -95.62 REMARK 500 LEU A 506 -3.12 -140.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NAP A 543 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 541 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP A 542 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP A 543 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3GWF RELATED DB: PDB REMARK 900 OPEN CRYSTAL STRUCTURE OF CYCLOHEXANONE MONOOXYGENASE DBREF 3GWD A 1 540 UNP Q6RXW1 Q6RXW1_9NOCA 1 540 SEQADV 3GWD THR A 6 UNP Q6RXW1 ILE 6 CONFLICT SEQADV 3GWD THR A 81 UNP Q6RXW1 SER 81 CONFLICT SEQADV 3GWD ASN A 223 UNP Q6RXW1 THR 223 CONFLICT SEQADV 3GWD LYS A 323 UNP Q6RXW1 THR 323 CONFLICT SEQRES 1 A 540 MET THR ALA GLN THR THR HIS THR VAL ASP ALA VAL VAL SEQRES 2 A 540 ILE GLY ALA GLY PHE GLY GLY ILE TYR ALA VAL HIS LYS SEQRES 3 A 540 LEU HIS HIS GLU LEU GLY LEU THR THR VAL GLY PHE ASP SEQRES 4 A 540 LYS ALA ASP GLY PRO GLY GLY THR TRP TYR TRP ASN ARG SEQRES 5 A 540 TYR PRO GLY ALA LEU SER ASP THR GLU SER HIS LEU TYR SEQRES 6 A 540 ARG PHE SER PHE ASP ARG ASP LEU LEU GLN GLU SER THR SEQRES 7 A 540 TRP LYS THR THR TYR ILE THR GLN PRO GLU ILE LEU GLU SEQRES 8 A 540 TYR LEU GLU ASP VAL VAL ASP ARG PHE ASP LEU ARG ARG SEQRES 9 A 540 HIS PHE LYS PHE GLY THR GLU VAL THR SER ALA LEU TYR SEQRES 10 A 540 LEU ASP ASP GLU ASN LEU TRP GLU VAL THR THR ASP HIS SEQRES 11 A 540 GLY GLU VAL TYR ARG ALA LYS TYR VAL VAL ASN ALA VAL SEQRES 12 A 540 GLY LEU LEU SER ALA ILE ASN PHE PRO ASN LEU PRO GLY SEQRES 13 A 540 LEU ASP THR PHE GLU GLY GLU THR ILE HIS THR ALA ALA SEQRES 14 A 540 TRP PRO GLU GLY LYS SER LEU ALA GLY ARG ARG VAL GLY SEQRES 15 A 540 VAL ILE GLY THR GLY SER THR GLY GLN GLN VAL ILE THR SEQRES 16 A 540 SER LEU ALA PRO GLU VAL GLU HIS LEU THR VAL PHE VAL SEQRES 17 A 540 ARG THR PRO GLN TYR SER VAL PRO VAL GLY ASN ARG PRO SEQRES 18 A 540 VAL ASN PRO GLU GLN ILE ALA GLU ILE LYS ALA ASP TYR SEQRES 19 A 540 ASP ARG ILE TRP GLU ARG ALA LYS ASN SER ALA VAL ALA SEQRES 20 A 540 PHE GLY PHE GLU GLU SER THR LEU PRO ALA MET SER VAL SEQRES 21 A 540 SER GLU GLU GLU ARG ASN ARG ILE PHE GLN GLU ALA TRP SEQRES 22 A 540 ASP HIS GLY GLY GLY PHE ARG PHE MET PHE GLY THR PHE SEQRES 23 A 540 GLY ASP ILE ALA THR ASP GLU ALA ALA ASN GLU ALA ALA SEQRES 24 A 540 ALA SER PHE ILE ARG ALA LYS VAL ALA GLU ILE ILE GLU SEQRES 25 A 540 ASP PRO GLU THR ALA ARG LYS LEU MET PRO LYS GLY LEU SEQRES 26 A 540 PHE ALA LYS ARG PRO LEU CYS ASP SER GLY TYR TYR GLU SEQRES 27 A 540 VAL TYR ASN ARG PRO ASN VAL GLU ALA VAL ALA ILE LYS SEQRES 28 A 540 GLU ASN PRO ILE ARG GLU VAL THR ALA LYS GLY VAL VAL SEQRES 29 A 540 THR GLU ASP GLY VAL LEU HIS GLU LEU ASP VAL LEU VAL SEQRES 30 A 540 PHE ALA THR GLY PHE ASP ALA VAL ASP GLY ASN TYR ARG SEQRES 31 A 540 ARG ILE GLU ILE ARG GLY ARG ASP GLY LEU HIS ILE ASN SEQRES 32 A 540 ASP HIS TRP ASP GLY GLN PRO THR SER TYR LEU GLY VAL SEQRES 33 A 540 SER THR ALA ASN PHE PRO ASN TRP PHE MET VAL LEU GLY SEQRES 34 A 540 PRO ASN GLY PRO PHE THR ASN LEU PRO PRO SER ILE GLU SEQRES 35 A 540 THR GLN VAL GLU TRP ILE SER ASP THR ILE GLY TYR ALA SEQRES 36 A 540 GLU ARG ASN GLY VAL ARG ALA ILE GLU PRO THR PRO GLU SEQRES 37 A 540 ALA GLU ALA GLU TRP THR GLU THR CYS THR GLU ILE ALA SEQRES 38 A 540 ASN ALA THR LEU PHE THR LYS GLY ASP SER TRP ILE PHE SEQRES 39 A 540 GLY ALA ASN ILE PRO GLY LYS LYS PRO SER VAL LEU PHE SEQRES 40 A 540 TYR LEU GLY GLY LEU ARG ASN TYR ARG ALA VAL MET ALA SEQRES 41 A 540 GLU VAL ALA ALA ASP GLY TYR ARG GLY PHE GLU VAL LYS SEQRES 42 A 540 SER ALA GLU MET VAL THR VAL HET FAD A 541 53 HET NAP A 542 48 HET NAP A 543 26 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 NAP 2(C21 H28 N7 O17 P3) FORMUL 5 HOH *149(H2 O) HELIX 1 1 GLY A 17 GLU A 30 1 14 HELIX 2 2 GLY A 46 ASN A 51 1 6 HELIX 3 3 ASP A 70 SER A 77 1 8 HELIX 4 4 THR A 85 PHE A 100 1 16 HELIX 5 5 LEU A 102 ARG A 104 5 3 HELIX 6 6 GLY A 156 PHE A 160 5 5 HELIX 7 7 ALA A 168 TRP A 170 5 3 HELIX 8 8 GLY A 187 VAL A 201 1 15 HELIX 9 9 ASN A 223 ASP A 233 1 11 HELIX 10 10 ASP A 233 ASN A 243 1 11 HELIX 11 11 SER A 261 GLY A 276 1 16 HELIX 12 12 GLY A 277 GLY A 284 1 8 HELIX 13 13 ASP A 292 ILE A 311 1 20 HELIX 14 14 ASP A 313 MET A 321 1 9 HELIX 15 15 TYR A 336 ARG A 342 5 7 HELIX 16 16 ASP A 386 ARG A 391 1 6 HELIX 17 17 GLY A 396 LEU A 400 5 5 HELIX 18 18 HIS A 401 TRP A 406 1 6 HELIX 19 19 ASN A 436 ASN A 458 1 23 HELIX 20 20 THR A 466 ALA A 483 1 18 HELIX 21 21 THR A 484 GLY A 489 5 6 HELIX 22 22 SER A 491 GLY A 495 5 5 HELIX 23 23 GLY A 511 ASP A 525 1 15 SHEET 1 A 7 PHE A 106 LYS A 107 0 SHEET 2 A 7 THR A 35 PHE A 38 1 N GLY A 37 O LYS A 107 SHEET 3 A 7 HIS A 7 ILE A 14 1 N VAL A 13 O VAL A 36 SHEET 4 A 7 VAL A 133 ASN A 141 1 O ARG A 135 N HIS A 7 SHEET 5 A 7 LEU A 123 THR A 128 -1 N TRP A 124 O ALA A 136 SHEET 6 A 7 VAL A 112 LEU A 118 -1 N LEU A 116 O GLU A 125 SHEET 7 A 7 GLU A 393 ARG A 395 1 O ARG A 395 N TYR A 117 SHEET 1 B 5 PHE A 106 LYS A 107 0 SHEET 2 B 5 THR A 35 PHE A 38 1 N GLY A 37 O LYS A 107 SHEET 3 B 5 HIS A 7 ILE A 14 1 N VAL A 13 O VAL A 36 SHEET 4 B 5 VAL A 133 ASN A 141 1 O ARG A 135 N HIS A 7 SHEET 5 B 5 TRP A 424 MET A 426 1 O PHE A 425 N ASN A 141 SHEET 1 C 5 GLU A 163 HIS A 166 0 SHEET 2 C 5 VAL A 375 PHE A 378 1 O PHE A 378 N ILE A 165 SHEET 3 C 5 ARG A 180 ILE A 184 1 N ILE A 184 O VAL A 377 SHEET 4 C 5 HIS A 203 VAL A 208 1 O PHE A 207 N VAL A 183 SHEET 5 C 5 VAL A 345 ALA A 349 1 O GLU A 346 N VAL A 206 SHEET 1 D 2 VAL A 215 PRO A 216 0 SHEET 2 D 2 CYS A 332 ASP A 333 1 O ASP A 333 N VAL A 215 SHEET 1 E 3 ILE A 355 THR A 359 0 SHEET 2 E 3 GLY A 362 THR A 365 -1 O VAL A 364 N GLU A 357 SHEET 3 E 3 LEU A 370 GLU A 372 -1 O HIS A 371 N VAL A 363 SHEET 1 F 2 GLY A 432 PRO A 433 0 SHEET 2 F 2 PHE A 507 TYR A 508 1 O TYR A 508 N GLY A 432 SHEET 1 G 2 ALA A 462 PRO A 465 0 SHEET 2 G 2 PHE A 530 LYS A 533 -1 O GLU A 531 N GLU A 464 SITE 1 AC1 33 ILE A 14 GLY A 15 GLY A 17 PHE A 18 SITE 2 AC1 33 GLY A 19 ASP A 39 LYS A 40 GLY A 46 SITE 3 AC1 33 THR A 47 TRP A 48 TRP A 50 TYR A 53 SITE 4 AC1 33 SER A 58 ASP A 59 THR A 60 TYR A 65 SITE 5 AC1 33 THR A 110 GLU A 111 VAL A 112 ALA A 142 SITE 6 AC1 33 VAL A 143 GLY A 144 ASN A 388 ASN A 436 SITE 7 AC1 33 LEU A 437 NAP A 542 NAP A 543 HOH A 545 SITE 8 AC1 33 HOH A 546 HOH A 559 HOH A 560 HOH A 563 SITE 9 AC1 33 HOH A 578 SITE 1 AC2 32 TYR A 53 LEU A 57 ASP A 59 LEU A 146 SITE 2 AC2 32 PRO A 152 ILE A 184 GLY A 185 THR A 186 SITE 3 AC2 32 GLY A 187 SER A 188 THR A 189 GLN A 192 SITE 4 AC2 32 ARG A 209 THR A 210 ARG A 329 ILE A 350 SITE 5 AC2 32 ALA A 379 THR A 380 GLY A 381 PHE A 382 SITE 6 AC2 32 TRP A 492 FAD A 541 HOH A 548 HOH A 564 SITE 7 AC2 32 HOH A 567 HOH A 569 HOH A 570 HOH A 581 SITE 8 AC2 32 HOH A 582 HOH A 584 HOH A 586 HOH A 595 SITE 1 AC3 11 LYS A 40 TRP A 50 GLU A 111 SER A 147 SITE 2 AC3 11 ILE A 149 ALA A 168 ASN A 388 FAD A 541 SITE 3 AC3 11 HOH A 558 HOH A 560 HOH A 656 CRYST1 62.485 90.989 100.408 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016004 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010990 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009959 0.00000