data_3GWG # _entry.id 3GWG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3GWG pdb_00003gwg 10.2210/pdb3gwg/pdb RCSB RCSB052392 ? ? WWPDB D_1000052392 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3GWG _pdbx_database_status.recvd_initial_deposition_date 2009-04-01 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lam, K.H.' 1 'Ling, T.K.' 2 'Au, S.W.' 3 # _citation.id primary _citation.title 'Crystal structure of activated CheY1 from Helicobacter pylori.' _citation.journal_abbrev J.Bacteriol. _citation.journal_volume 192 _citation.page_first 2324 _citation.page_last 2334 _citation.year 2010 _citation.journal_id_ASTM JOBAAY _citation.country US _citation.journal_id_ISSN 0021-9193 _citation.journal_id_CSD 0767 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20207758 _citation.pdbx_database_id_DOI 10.1128/JB.00603-09 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lam, K.H.' 1 ? primary 'Ling, T.K.' 2 ? primary 'Au, S.W.' 3 ? # _cell.entry_id 3GWG _cell.length_a 70.320 _cell.length_b 38.476 _cell.length_c 38.856 _cell.angle_alpha 90.00 _cell.angle_beta 106.95 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3GWG _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Chemotaxis protein cheY homolog' 14344.592 1 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 4 water nat water 18.015 142 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'CHEMOTAXIS PROTEIN CHEY1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPLGSMKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRSDSRFK EIPIIMITTEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEVVLGTND ; _entity_poly.pdbx_seq_one_letter_code_can ;GPLGSMKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRSDSRFK EIPIIMITTEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEVVLGTND ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 MET n 1 7 LYS n 1 8 LEU n 1 9 LEU n 1 10 VAL n 1 11 VAL n 1 12 ASP n 1 13 ASP n 1 14 SER n 1 15 SER n 1 16 THR n 1 17 MET n 1 18 ARG n 1 19 ARG n 1 20 ILE n 1 21 ILE n 1 22 LYS n 1 23 ASN n 1 24 THR n 1 25 LEU n 1 26 SER n 1 27 ARG n 1 28 LEU n 1 29 GLY n 1 30 TYR n 1 31 GLU n 1 32 ASP n 1 33 VAL n 1 34 LEU n 1 35 GLU n 1 36 ALA n 1 37 GLU n 1 38 HIS n 1 39 GLY n 1 40 VAL n 1 41 GLU n 1 42 ALA n 1 43 TRP n 1 44 GLU n 1 45 LYS n 1 46 LEU n 1 47 ASP n 1 48 ALA n 1 49 ASN n 1 50 ALA n 1 51 ASP n 1 52 THR n 1 53 LYS n 1 54 VAL n 1 55 LEU n 1 56 ILE n 1 57 THR n 1 58 ASP n 1 59 TRP n 1 60 ASN n 1 61 MET n 1 62 PRO n 1 63 GLU n 1 64 MET n 1 65 ASN n 1 66 GLY n 1 67 LEU n 1 68 ASP n 1 69 LEU n 1 70 VAL n 1 71 LYS n 1 72 LYS n 1 73 VAL n 1 74 ARG n 1 75 SER n 1 76 ASP n 1 77 SER n 1 78 ARG n 1 79 PHE n 1 80 LYS n 1 81 GLU n 1 82 ILE n 1 83 PRO n 1 84 ILE n 1 85 ILE n 1 86 MET n 1 87 ILE n 1 88 THR n 1 89 THR n 1 90 GLU n 1 91 GLY n 1 92 GLY n 1 93 LYS n 1 94 ALA n 1 95 GLU n 1 96 VAL n 1 97 ILE n 1 98 THR n 1 99 ALA n 1 100 LEU n 1 101 LYS n 1 102 ALA n 1 103 GLY n 1 104 VAL n 1 105 ASN n 1 106 ASN n 1 107 TYR n 1 108 ILE n 1 109 VAL n 1 110 LYS n 1 111 PRO n 1 112 PHE n 1 113 THR n 1 114 PRO n 1 115 GLN n 1 116 VAL n 1 117 LEU n 1 118 LYS n 1 119 GLU n 1 120 LYS n 1 121 LEU n 1 122 GLU n 1 123 VAL n 1 124 VAL n 1 125 LEU n 1 126 GLY n 1 127 THR n 1 128 ASN n 1 129 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene CheY1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 26695 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Helicobacter pylori' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 85962 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX-6P-2 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CHEY_HELPY _struct_ref.pdbx_db_accession P71403 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPII MITTEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEVVLGTND ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3GWG _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 6 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 129 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P71403 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 124 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 124 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3GWG GLY A 1 ? UNP P71403 ? ? 'expression tag' -4 1 1 3GWG PRO A 2 ? UNP P71403 ? ? 'expression tag' -3 2 1 3GWG LEU A 3 ? UNP P71403 ? ? 'expression tag' -2 3 1 3GWG GLY A 4 ? UNP P71403 ? ? 'expression tag' -1 4 1 3GWG SER A 5 ? UNP P71403 ? ? 'expression tag' 0 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3GWG _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.80 _exptl_crystal.density_percent_sol 31.83 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pdbx_details '1.6M ammonium sulfate, 0.1M sodium acetate, 35% MPEG2000, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2006-10-17 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator varimax _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54 # _reflns.entry_id 3GWG _reflns.observed_criterion_sigma_I 1.0 _reflns.observed_criterion_sigma_F 1.0 _reflns.d_resolution_low 37.16 _reflns.d_resolution_high 1.8 _reflns.number_obs 9175 _reflns.number_all 9175 _reflns.percent_possible_obs 98.1 _reflns.pdbx_Rmerge_I_obs 0.031 _reflns.pdbx_Rsym_value 0.037 _reflns.pdbx_netI_over_sigmaI 30.3 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.8 _reflns_shell.d_res_low 1.9 _reflns_shell.percent_possible_all 96.1 _reflns_shell.Rmerge_I_obs 0.072 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 15.4 _reflns_shell.pdbx_redundancy 3.6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1299 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3GWG _refine.ls_number_reflns_obs 8732 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.37 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs 98.10 _refine.ls_R_factor_obs 0.14861 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.14670 _refine.ls_R_factor_R_free 0.18609 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 436 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.963 _refine.correlation_coeff_Fo_to_Fc_free 0.937 _refine.B_iso_mean 10.959 _refine.aniso_B[1][1] 0.01 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] -0.02 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.01 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 3CHY _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.139 _refine.pdbx_overall_ESU_R_Free 0.123 _refine.overall_SU_ML 0.074 _refine.overall_SU_B 2.331 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 966 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 12 _refine_hist.number_atoms_solvent 142 _refine_hist.number_atoms_total 1120 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 19.37 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.012 0.022 ? 986 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.308 1.995 ? 1333 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.892 5.000 ? 122 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 41.697 25.641 ? 39 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 10.827 15.000 ? 195 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 16.540 15.000 ? 5 'X-RAY DIFFRACTION' ? r_chiral_restr 0.078 0.200 ? 160 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 693 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.200 0.200 ? 473 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.303 0.200 ? 688 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.154 0.200 ? 109 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.226 0.200 ? 62 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.196 0.200 ? 27 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.771 1.500 ? 637 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.998 2.000 ? 996 'X-RAY DIFFRACTION' ? r_scbond_it 1.898 3.000 ? 398 'X-RAY DIFFRACTION' ? r_scangle_it 3.162 4.500 ? 337 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.800 _refine_ls_shell.d_res_low 1.846 _refine_ls_shell.number_reflns_R_work 636 _refine_ls_shell.R_factor_R_work 0.185 _refine_ls_shell.percent_reflns_obs 95.68 _refine_ls_shell.R_factor_R_free 0.278 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 28 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3GWG _struct.title 'Crystal structure of CheY of Helicobacter pylori' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3GWG _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text ;Chemotaxis, sulfate-bound CheY, Cytoplasm, Flagellar rotation, Magnesium, Metal-binding, Phosphoprotein, Two-component regulatory system, SIGNALING PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 14 ? LEU A 28 ? SER A 9 LEU A 23 1 ? 15 HELX_P HELX_P2 2 HIS A 38 ? ASN A 49 ? HIS A 33 ASN A 44 1 ? 12 HELX_P HELX_P3 3 ASN A 65 ? SER A 75 ? ASN A 60 SER A 70 1 ? 11 HELX_P HELX_P4 4 GLY A 92 ? GLY A 103 ? GLY A 87 GLY A 98 1 ? 12 HELX_P HELX_P5 5 THR A 113 ? GLY A 126 ? THR A 108 GLY A 121 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASP 13 OD1 ? ? ? 1_555 C MG . MG ? ? A ASP 8 A MG 126 1_555 ? ? ? ? ? ? ? 2.432 ? ? metalc2 metalc ? ? A ASP 58 OD2 ? ? ? 1_555 C MG . MG ? ? A ASP 53 A MG 126 1_555 ? ? ? ? ? ? ? 2.435 ? ? metalc3 metalc ? ? A ASN 60 O ? ? ? 1_555 C MG . MG ? ? A ASN 55 A MG 126 1_555 ? ? ? ? ? ? ? 2.293 ? ? metalc4 metalc ? ? C MG . MG ? ? ? 1_555 D SO4 . O1 ? ? A MG 126 A SO4 127 1_555 ? ? ? ? ? ? ? 2.174 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 126 A HOH 148 1_555 ? ? ? ? ? ? ? 2.515 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LYS _struct_mon_prot_cis.label_seq_id 110 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LYS _struct_mon_prot_cis.auth_seq_id 105 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 111 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 106 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -3.53 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 33 ? ALA A 36 ? VAL A 28 ALA A 31 A 2 LEU A 8 ? VAL A 11 ? LEU A 3 VAL A 6 A 3 VAL A 54 ? THR A 57 ? VAL A 49 THR A 52 A 4 ILE A 84 ? THR A 88 ? ILE A 79 THR A 83 A 5 ASN A 106 ? VAL A 109 ? ASN A 101 VAL A 104 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LEU A 34 ? O LEU A 29 N VAL A 10 ? N VAL A 5 A 2 3 N LEU A 9 ? N LEU A 4 O ILE A 56 ? O ILE A 51 A 3 4 N LEU A 55 ? N LEU A 50 O ILE A 85 ? O ILE A 80 A 4 5 N MET A 86 ? N MET A 81 O ILE A 108 ? O ILE A 103 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 125 ? 3 'BINDING SITE FOR RESIDUE MG A 125' AC2 Software A MG 126 ? 5 'BINDING SITE FOR RESIDUE MG A 126' AC3 Software A SO4 127 ? 8 'BINDING SITE FOR RESIDUE SO4 A 127' AC4 Software A SO4 128 ? 8 'BINDING SITE FOR RESIDUE SO4 A 128' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 MET A 17 ? MET A 12 . ? 1_555 ? 2 AC1 3 GLU A 35 ? GLU A 30 . ? 4_456 ? 3 AC1 3 LYS A 110 ? LYS A 105 . ? 1_555 ? 4 AC2 5 ASP A 13 ? ASP A 8 . ? 1_555 ? 5 AC2 5 ASP A 58 ? ASP A 53 . ? 1_555 ? 6 AC2 5 ASN A 60 ? ASN A 55 . ? 1_555 ? 7 AC2 5 SO4 D . ? SO4 A 127 . ? 1_555 ? 8 AC2 5 HOH F . ? HOH A 148 . ? 1_555 ? 9 AC3 8 LYS A 22 ? LYS A 17 . ? 4_456 ? 10 AC3 8 ASP A 58 ? ASP A 53 . ? 1_555 ? 11 AC3 8 TRP A 59 ? TRP A 54 . ? 1_555 ? 12 AC3 8 ASN A 60 ? ASN A 55 . ? 1_555 ? 13 AC3 8 THR A 88 ? THR A 83 . ? 1_555 ? 14 AC3 8 THR A 89 ? THR A 84 . ? 1_555 ? 15 AC3 8 LYS A 110 ? LYS A 105 . ? 1_555 ? 16 AC3 8 MG C . ? MG A 126 . ? 1_555 ? 17 AC4 8 LYS A 7 ? LYS A 2 . ? 1_565 ? 18 AC4 8 ASP A 51 ? ASP A 46 . ? 1_565 ? 19 AC4 8 LYS A 53 ? LYS A 48 . ? 1_565 ? 20 AC4 8 GLY A 92 ? GLY A 87 . ? 1_555 ? 21 AC4 8 LYS A 93 ? LYS A 88 . ? 1_555 ? 22 AC4 8 ASN A 105 ? ASN A 100 . ? 4_455 ? 23 AC4 8 HOH F . ? HOH A 210 . ? 1_555 ? 24 AC4 8 HOH F . ? HOH A 257 . ? 1_555 ? # _database_PDB_matrix.entry_id 3GWG _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3GWG _atom_sites.fract_transf_matrix[1][1] 0.014221 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004334 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.025990 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.026905 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -4 ? ? ? A . n A 1 2 PRO 2 -3 ? ? ? A . n A 1 3 LEU 3 -2 ? ? ? A . n A 1 4 GLY 4 -1 ? ? ? A . n A 1 5 SER 5 0 ? ? ? A . n A 1 6 MET 6 1 1 MET MET A . n A 1 7 LYS 7 2 2 LYS LYS A . n A 1 8 LEU 8 3 3 LEU LEU A . n A 1 9 LEU 9 4 4 LEU LEU A . n A 1 10 VAL 10 5 5 VAL VAL A . n A 1 11 VAL 11 6 6 VAL VAL A . n A 1 12 ASP 12 7 7 ASP ASP A . n A 1 13 ASP 13 8 8 ASP ASP A . n A 1 14 SER 14 9 9 SER SER A . n A 1 15 SER 15 10 10 SER SER A . n A 1 16 THR 16 11 11 THR THR A . n A 1 17 MET 17 12 12 MET MET A . n A 1 18 ARG 18 13 13 ARG ARG A . n A 1 19 ARG 19 14 14 ARG ARG A . n A 1 20 ILE 20 15 15 ILE ILE A . n A 1 21 ILE 21 16 16 ILE ILE A . n A 1 22 LYS 22 17 17 LYS LYS A . n A 1 23 ASN 23 18 18 ASN ASN A . n A 1 24 THR 24 19 19 THR THR A . n A 1 25 LEU 25 20 20 LEU LEU A . n A 1 26 SER 26 21 21 SER SER A . n A 1 27 ARG 27 22 22 ARG ARG A . n A 1 28 LEU 28 23 23 LEU LEU A . n A 1 29 GLY 29 24 24 GLY GLY A . n A 1 30 TYR 30 25 25 TYR TYR A . n A 1 31 GLU 31 26 26 GLU GLU A . n A 1 32 ASP 32 27 27 ASP ASP A . n A 1 33 VAL 33 28 28 VAL VAL A . n A 1 34 LEU 34 29 29 LEU LEU A . n A 1 35 GLU 35 30 30 GLU GLU A . n A 1 36 ALA 36 31 31 ALA ALA A . n A 1 37 GLU 37 32 32 GLU GLU A . n A 1 38 HIS 38 33 33 HIS HIS A . n A 1 39 GLY 39 34 34 GLY GLY A . n A 1 40 VAL 40 35 35 VAL VAL A . n A 1 41 GLU 41 36 36 GLU GLU A . n A 1 42 ALA 42 37 37 ALA ALA A . n A 1 43 TRP 43 38 38 TRP TRP A . n A 1 44 GLU 44 39 39 GLU GLU A . n A 1 45 LYS 45 40 40 LYS LYS A . n A 1 46 LEU 46 41 41 LEU LEU A . n A 1 47 ASP 47 42 42 ASP ASP A . n A 1 48 ALA 48 43 43 ALA ALA A . n A 1 49 ASN 49 44 44 ASN ASN A . n A 1 50 ALA 50 45 45 ALA ALA A . n A 1 51 ASP 51 46 46 ASP ASP A . n A 1 52 THR 52 47 47 THR THR A . n A 1 53 LYS 53 48 48 LYS LYS A . n A 1 54 VAL 54 49 49 VAL VAL A . n A 1 55 LEU 55 50 50 LEU LEU A . n A 1 56 ILE 56 51 51 ILE ILE A . n A 1 57 THR 57 52 52 THR THR A . n A 1 58 ASP 58 53 53 ASP ASP A . n A 1 59 TRP 59 54 54 TRP TRP A . n A 1 60 ASN 60 55 55 ASN ASN A . n A 1 61 MET 61 56 56 MET MET A . n A 1 62 PRO 62 57 57 PRO PRO A . n A 1 63 GLU 63 58 58 GLU GLU A . n A 1 64 MET 64 59 59 MET MET A . n A 1 65 ASN 65 60 60 ASN ASN A . n A 1 66 GLY 66 61 61 GLY GLY A . n A 1 67 LEU 67 62 62 LEU LEU A . n A 1 68 ASP 68 63 63 ASP ASP A . n A 1 69 LEU 69 64 64 LEU LEU A . n A 1 70 VAL 70 65 65 VAL VAL A . n A 1 71 LYS 71 66 66 LYS LYS A . n A 1 72 LYS 72 67 67 LYS LYS A . n A 1 73 VAL 73 68 68 VAL VAL A . n A 1 74 ARG 74 69 69 ARG ARG A . n A 1 75 SER 75 70 70 SER SER A . n A 1 76 ASP 76 71 71 ASP ASP A . n A 1 77 SER 77 72 72 SER SER A . n A 1 78 ARG 78 73 73 ARG ARG A . n A 1 79 PHE 79 74 74 PHE PHE A . n A 1 80 LYS 80 75 75 LYS LYS A . n A 1 81 GLU 81 76 76 GLU GLU A . n A 1 82 ILE 82 77 77 ILE ILE A . n A 1 83 PRO 83 78 78 PRO PRO A . n A 1 84 ILE 84 79 79 ILE ILE A . n A 1 85 ILE 85 80 80 ILE ILE A . n A 1 86 MET 86 81 81 MET MET A . n A 1 87 ILE 87 82 82 ILE ILE A . n A 1 88 THR 88 83 83 THR THR A . n A 1 89 THR 89 84 84 THR THR A . n A 1 90 GLU 90 85 85 GLU GLU A . n A 1 91 GLY 91 86 86 GLY GLY A . n A 1 92 GLY 92 87 87 GLY GLY A . n A 1 93 LYS 93 88 88 LYS LYS A . n A 1 94 ALA 94 89 89 ALA ALA A . n A 1 95 GLU 95 90 90 GLU GLU A . n A 1 96 VAL 96 91 91 VAL VAL A . n A 1 97 ILE 97 92 92 ILE ILE A . n A 1 98 THR 98 93 93 THR THR A . n A 1 99 ALA 99 94 94 ALA ALA A . n A 1 100 LEU 100 95 95 LEU LEU A . n A 1 101 LYS 101 96 96 LYS LYS A . n A 1 102 ALA 102 97 97 ALA ALA A . n A 1 103 GLY 103 98 98 GLY GLY A . n A 1 104 VAL 104 99 99 VAL VAL A . n A 1 105 ASN 105 100 100 ASN ASN A . n A 1 106 ASN 106 101 101 ASN ASN A . n A 1 107 TYR 107 102 102 TYR TYR A . n A 1 108 ILE 108 103 103 ILE ILE A . n A 1 109 VAL 109 104 104 VAL VAL A . n A 1 110 LYS 110 105 105 LYS LYS A . n A 1 111 PRO 111 106 106 PRO PRO A . n A 1 112 PHE 112 107 107 PHE PHE A . n A 1 113 THR 113 108 108 THR THR A . n A 1 114 PRO 114 109 109 PRO PRO A . n A 1 115 GLN 115 110 110 GLN GLN A . n A 1 116 VAL 116 111 111 VAL VAL A . n A 1 117 LEU 117 112 112 LEU LEU A . n A 1 118 LYS 118 113 113 LYS LYS A . n A 1 119 GLU 119 114 114 GLU GLU A . n A 1 120 LYS 120 115 115 LYS LYS A . n A 1 121 LEU 121 116 116 LEU LEU A . n A 1 122 GLU 122 117 117 GLU GLU A . n A 1 123 VAL 123 118 118 VAL VAL A . n A 1 124 VAL 124 119 119 VAL VAL A . n A 1 125 LEU 125 120 120 LEU LEU A . n A 1 126 GLY 126 121 121 GLY GLY A . n A 1 127 THR 127 122 122 THR THR A . n A 1 128 ASN 128 123 123 ASN ASN A . n A 1 129 ASP 129 124 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 125 1 MG MG A . C 2 MG 1 126 2 MG MG A . D 3 SO4 1 127 1 SO4 SO4 A . E 3 SO4 1 128 2 SO4 SO4 A . F 4 HOH 1 129 129 HOH HOH A . F 4 HOH 2 130 2 HOH HOH A . F 4 HOH 3 131 131 HOH HOH A . F 4 HOH 4 132 132 HOH HOH A . F 4 HOH 5 133 133 HOH HOH A . F 4 HOH 6 134 134 HOH HOH A . F 4 HOH 7 135 135 HOH HOH A . F 4 HOH 8 136 136 HOH HOH A . F 4 HOH 9 137 137 HOH HOH A . F 4 HOH 10 138 138 HOH HOH A . F 4 HOH 11 139 139 HOH HOH A . F 4 HOH 12 140 140 HOH HOH A . F 4 HOH 13 141 141 HOH HOH A . F 4 HOH 14 142 142 HOH HOH A . F 4 HOH 15 143 143 HOH HOH A . F 4 HOH 16 144 3 HOH HOH A . F 4 HOH 17 145 4 HOH HOH A . F 4 HOH 18 146 146 HOH HOH A . F 4 HOH 19 147 147 HOH HOH A . F 4 HOH 20 148 5 HOH HOH A . F 4 HOH 21 149 6 HOH HOH A . F 4 HOH 22 150 7 HOH HOH A . F 4 HOH 23 151 151 HOH HOH A . F 4 HOH 24 152 152 HOH HOH A . F 4 HOH 25 153 153 HOH HOH A . F 4 HOH 26 154 154 HOH HOH A . F 4 HOH 27 155 8 HOH HOH A . F 4 HOH 28 156 9 HOH HOH A . F 4 HOH 29 157 10 HOH HOH A . F 4 HOH 30 158 158 HOH HOH A . F 4 HOH 31 159 11 HOH HOH A . F 4 HOH 32 160 160 HOH HOH A . F 4 HOH 33 161 12 HOH HOH A . F 4 HOH 34 162 13 HOH HOH A . F 4 HOH 35 163 14 HOH HOH A . F 4 HOH 36 164 164 HOH HOH A . F 4 HOH 37 165 15 HOH HOH A . F 4 HOH 38 166 16 HOH HOH A . F 4 HOH 39 167 167 HOH HOH A . F 4 HOH 40 168 17 HOH HOH A . F 4 HOH 41 169 169 HOH HOH A . F 4 HOH 42 170 18 HOH HOH A . F 4 HOH 43 171 19 HOH HOH A . F 4 HOH 44 172 172 HOH HOH A . F 4 HOH 45 173 20 HOH HOH A . F 4 HOH 46 174 21 HOH HOH A . F 4 HOH 47 175 175 HOH HOH A . F 4 HOH 48 176 176 HOH HOH A . F 4 HOH 49 177 22 HOH HOH A . F 4 HOH 50 178 178 HOH HOH A . F 4 HOH 51 179 23 HOH HOH A . F 4 HOH 52 180 24 HOH HOH A . F 4 HOH 53 181 25 HOH HOH A . F 4 HOH 54 182 26 HOH HOH A . F 4 HOH 55 183 183 HOH HOH A . F 4 HOH 56 184 27 HOH HOH A . F 4 HOH 57 185 28 HOH HOH A . F 4 HOH 58 186 30 HOH HOH A . F 4 HOH 59 187 31 HOH HOH A . F 4 HOH 60 188 32 HOH HOH A . F 4 HOH 61 189 33 HOH HOH A . F 4 HOH 62 190 34 HOH HOH A . F 4 HOH 63 191 35 HOH HOH A . F 4 HOH 64 192 36 HOH HOH A . F 4 HOH 65 193 37 HOH HOH A . F 4 HOH 66 194 38 HOH HOH A . F 4 HOH 67 195 39 HOH HOH A . F 4 HOH 68 196 40 HOH HOH A . F 4 HOH 69 197 41 HOH HOH A . F 4 HOH 70 198 42 HOH HOH A . F 4 HOH 71 199 43 HOH HOH A . F 4 HOH 72 200 44 HOH HOH A . F 4 HOH 73 201 45 HOH HOH A . F 4 HOH 74 202 46 HOH HOH A . F 4 HOH 75 203 47 HOH HOH A . F 4 HOH 76 204 48 HOH HOH A . F 4 HOH 77 205 49 HOH HOH A . F 4 HOH 78 206 50 HOH HOH A . F 4 HOH 79 207 51 HOH HOH A . F 4 HOH 80 208 52 HOH HOH A . F 4 HOH 81 209 53 HOH HOH A . F 4 HOH 82 210 54 HOH HOH A . F 4 HOH 83 211 55 HOH HOH A . F 4 HOH 84 212 56 HOH HOH A . F 4 HOH 85 213 57 HOH HOH A . F 4 HOH 86 214 58 HOH HOH A . F 4 HOH 87 215 59 HOH HOH A . F 4 HOH 88 216 60 HOH HOH A . F 4 HOH 89 217 61 HOH HOH A . F 4 HOH 90 218 62 HOH HOH A . F 4 HOH 91 219 63 HOH HOH A . F 4 HOH 92 220 64 HOH HOH A . F 4 HOH 93 221 65 HOH HOH A . F 4 HOH 94 222 66 HOH HOH A . F 4 HOH 95 223 67 HOH HOH A . F 4 HOH 96 224 68 HOH HOH A . F 4 HOH 97 225 69 HOH HOH A . F 4 HOH 98 226 70 HOH HOH A . F 4 HOH 99 227 71 HOH HOH A . F 4 HOH 100 228 72 HOH HOH A . F 4 HOH 101 229 73 HOH HOH A . F 4 HOH 102 230 74 HOH HOH A . F 4 HOH 103 231 75 HOH HOH A . F 4 HOH 104 232 76 HOH HOH A . F 4 HOH 105 233 77 HOH HOH A . F 4 HOH 106 234 79 HOH HOH A . F 4 HOH 107 235 81 HOH HOH A . F 4 HOH 108 236 83 HOH HOH A . F 4 HOH 109 237 85 HOH HOH A . F 4 HOH 110 238 86 HOH HOH A . F 4 HOH 111 239 87 HOH HOH A . F 4 HOH 112 240 88 HOH HOH A . F 4 HOH 113 241 89 HOH HOH A . F 4 HOH 114 242 91 HOH HOH A . F 4 HOH 115 243 92 HOH HOH A . F 4 HOH 116 244 94 HOH HOH A . F 4 HOH 117 245 95 HOH HOH A . F 4 HOH 118 246 96 HOH HOH A . F 4 HOH 119 247 97 HOH HOH A . F 4 HOH 120 248 98 HOH HOH A . F 4 HOH 121 249 101 HOH HOH A . F 4 HOH 122 250 102 HOH HOH A . F 4 HOH 123 251 103 HOH HOH A . F 4 HOH 124 252 104 HOH HOH A . F 4 HOH 125 253 106 HOH HOH A . F 4 HOH 126 254 107 HOH HOH A . F 4 HOH 127 255 108 HOH HOH A . F 4 HOH 128 256 109 HOH HOH A . F 4 HOH 129 257 110 HOH HOH A . F 4 HOH 130 258 111 HOH HOH A . F 4 HOH 131 259 112 HOH HOH A . F 4 HOH 132 260 113 HOH HOH A . F 4 HOH 133 261 115 HOH HOH A . F 4 HOH 134 262 117 HOH HOH A . F 4 HOH 135 263 118 HOH HOH A . F 4 HOH 136 264 119 HOH HOH A . F 4 HOH 137 265 120 HOH HOH A . F 4 HOH 138 266 121 HOH HOH A . F 4 HOH 139 267 122 HOH HOH A . F 4 HOH 140 268 123 HOH HOH A . F 4 HOH 141 269 124 HOH HOH A . F 4 HOH 142 270 128 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 135 ? F HOH . 2 1 A HOH 139 ? F HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 13 ? A ASP 8 ? 1_555 MG ? C MG . ? A MG 126 ? 1_555 OD2 ? A ASP 58 ? A ASP 53 ? 1_555 86.2 ? 2 OD1 ? A ASP 13 ? A ASP 8 ? 1_555 MG ? C MG . ? A MG 126 ? 1_555 O ? A ASN 60 ? A ASN 55 ? 1_555 96.4 ? 3 OD2 ? A ASP 58 ? A ASP 53 ? 1_555 MG ? C MG . ? A MG 126 ? 1_555 O ? A ASN 60 ? A ASN 55 ? 1_555 88.4 ? 4 OD1 ? A ASP 13 ? A ASP 8 ? 1_555 MG ? C MG . ? A MG 126 ? 1_555 O1 ? D SO4 . ? A SO4 127 ? 1_555 166.0 ? 5 OD2 ? A ASP 58 ? A ASP 53 ? 1_555 MG ? C MG . ? A MG 126 ? 1_555 O1 ? D SO4 . ? A SO4 127 ? 1_555 104.5 ? 6 O ? A ASN 60 ? A ASN 55 ? 1_555 MG ? C MG . ? A MG 126 ? 1_555 O1 ? D SO4 . ? A SO4 127 ? 1_555 93.0 ? 7 OD1 ? A ASP 13 ? A ASP 8 ? 1_555 MG ? C MG . ? A MG 126 ? 1_555 O ? F HOH . ? A HOH 148 ? 1_555 79.1 ? 8 OD2 ? A ASP 58 ? A ASP 53 ? 1_555 MG ? C MG . ? A MG 126 ? 1_555 O ? F HOH . ? A HOH 148 ? 1_555 93.4 ? 9 O ? A ASN 60 ? A ASN 55 ? 1_555 MG ? C MG . ? A MG 126 ? 1_555 O ? F HOH . ? A HOH 148 ? 1_555 175.0 ? 10 O1 ? D SO4 . ? A SO4 127 ? 1_555 MG ? C MG . ? A MG 126 ? 1_555 O ? F HOH . ? A HOH 148 ? 1_555 91.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-03-09 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CrystalClear 'data collection' . ? 1 MOLREP phasing . ? 2 REFMAC refinement 5.4.0077 ? 3 MOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CD _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 LYS _pdbx_validate_rmsd_angle.auth_seq_id_1 67 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CE _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 LYS _pdbx_validate_rmsd_angle.auth_seq_id_2 67 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NZ _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 LYS _pdbx_validate_rmsd_angle.auth_seq_id_3 67 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 95.48 _pdbx_validate_rmsd_angle.angle_target_value 111.70 _pdbx_validate_rmsd_angle.angle_deviation -16.22 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.30 _pdbx_validate_rmsd_angle.linker_flag N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id MET _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 59 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 78.02 _pdbx_validate_torsion.psi 115.20 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -4 ? A GLY 1 2 1 Y 1 A PRO -3 ? A PRO 2 3 1 Y 1 A LEU -2 ? A LEU 3 4 1 Y 1 A GLY -1 ? A GLY 4 5 1 Y 1 A SER 0 ? A SER 5 6 1 Y 1 A ASP 124 ? A ASP 129 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 MG MG MG N N 236 PHE N N N N 237 PHE CA C N S 238 PHE C C N N 239 PHE O O N N 240 PHE CB C N N 241 PHE CG C Y N 242 PHE CD1 C Y N 243 PHE CD2 C Y N 244 PHE CE1 C Y N 245 PHE CE2 C Y N 246 PHE CZ C Y N 247 PHE OXT O N N 248 PHE H H N N 249 PHE H2 H N N 250 PHE HA H N N 251 PHE HB2 H N N 252 PHE HB3 H N N 253 PHE HD1 H N N 254 PHE HD2 H N N 255 PHE HE1 H N N 256 PHE HE2 H N N 257 PHE HZ H N N 258 PHE HXT H N N 259 PRO N N N N 260 PRO CA C N S 261 PRO C C N N 262 PRO O O N N 263 PRO CB C N N 264 PRO CG C N N 265 PRO CD C N N 266 PRO OXT O N N 267 PRO H H N N 268 PRO HA H N N 269 PRO HB2 H N N 270 PRO HB3 H N N 271 PRO HG2 H N N 272 PRO HG3 H N N 273 PRO HD2 H N N 274 PRO HD3 H N N 275 PRO HXT H N N 276 SER N N N N 277 SER CA C N S 278 SER C C N N 279 SER O O N N 280 SER CB C N N 281 SER OG O N N 282 SER OXT O N N 283 SER H H N N 284 SER H2 H N N 285 SER HA H N N 286 SER HB2 H N N 287 SER HB3 H N N 288 SER HG H N N 289 SER HXT H N N 290 SO4 S S N N 291 SO4 O1 O N N 292 SO4 O2 O N N 293 SO4 O3 O N N 294 SO4 O4 O N N 295 THR N N N N 296 THR CA C N S 297 THR C C N N 298 THR O O N N 299 THR CB C N R 300 THR OG1 O N N 301 THR CG2 C N N 302 THR OXT O N N 303 THR H H N N 304 THR H2 H N N 305 THR HA H N N 306 THR HB H N N 307 THR HG1 H N N 308 THR HG21 H N N 309 THR HG22 H N N 310 THR HG23 H N N 311 THR HXT H N N 312 TRP N N N N 313 TRP CA C N S 314 TRP C C N N 315 TRP O O N N 316 TRP CB C N N 317 TRP CG C Y N 318 TRP CD1 C Y N 319 TRP CD2 C Y N 320 TRP NE1 N Y N 321 TRP CE2 C Y N 322 TRP CE3 C Y N 323 TRP CZ2 C Y N 324 TRP CZ3 C Y N 325 TRP CH2 C Y N 326 TRP OXT O N N 327 TRP H H N N 328 TRP H2 H N N 329 TRP HA H N N 330 TRP HB2 H N N 331 TRP HB3 H N N 332 TRP HD1 H N N 333 TRP HE1 H N N 334 TRP HE3 H N N 335 TRP HZ2 H N N 336 TRP HZ3 H N N 337 TRP HH2 H N N 338 TRP HXT H N N 339 TYR N N N N 340 TYR CA C N S 341 TYR C C N N 342 TYR O O N N 343 TYR CB C N N 344 TYR CG C Y N 345 TYR CD1 C Y N 346 TYR CD2 C Y N 347 TYR CE1 C Y N 348 TYR CE2 C Y N 349 TYR CZ C Y N 350 TYR OH O N N 351 TYR OXT O N N 352 TYR H H N N 353 TYR H2 H N N 354 TYR HA H N N 355 TYR HB2 H N N 356 TYR HB3 H N N 357 TYR HD1 H N N 358 TYR HD2 H N N 359 TYR HE1 H N N 360 TYR HE2 H N N 361 TYR HH H N N 362 TYR HXT H N N 363 VAL N N N N 364 VAL CA C N S 365 VAL C C N N 366 VAL O O N N 367 VAL CB C N N 368 VAL CG1 C N N 369 VAL CG2 C N N 370 VAL OXT O N N 371 VAL H H N N 372 VAL H2 H N N 373 VAL HA H N N 374 VAL HB H N N 375 VAL HG11 H N N 376 VAL HG12 H N N 377 VAL HG13 H N N 378 VAL HG21 H N N 379 VAL HG22 H N N 380 VAL HG23 H N N 381 VAL HXT H N N 382 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 SO4 S O1 doub N N 277 SO4 S O2 doub N N 278 SO4 S O3 sing N N 279 SO4 S O4 sing N N 280 THR N CA sing N N 281 THR N H sing N N 282 THR N H2 sing N N 283 THR CA C sing N N 284 THR CA CB sing N N 285 THR CA HA sing N N 286 THR C O doub N N 287 THR C OXT sing N N 288 THR CB OG1 sing N N 289 THR CB CG2 sing N N 290 THR CB HB sing N N 291 THR OG1 HG1 sing N N 292 THR CG2 HG21 sing N N 293 THR CG2 HG22 sing N N 294 THR CG2 HG23 sing N N 295 THR OXT HXT sing N N 296 TRP N CA sing N N 297 TRP N H sing N N 298 TRP N H2 sing N N 299 TRP CA C sing N N 300 TRP CA CB sing N N 301 TRP CA HA sing N N 302 TRP C O doub N N 303 TRP C OXT sing N N 304 TRP CB CG sing N N 305 TRP CB HB2 sing N N 306 TRP CB HB3 sing N N 307 TRP CG CD1 doub Y N 308 TRP CG CD2 sing Y N 309 TRP CD1 NE1 sing Y N 310 TRP CD1 HD1 sing N N 311 TRP CD2 CE2 doub Y N 312 TRP CD2 CE3 sing Y N 313 TRP NE1 CE2 sing Y N 314 TRP NE1 HE1 sing N N 315 TRP CE2 CZ2 sing Y N 316 TRP CE3 CZ3 doub Y N 317 TRP CE3 HE3 sing N N 318 TRP CZ2 CH2 doub Y N 319 TRP CZ2 HZ2 sing N N 320 TRP CZ3 CH2 sing Y N 321 TRP CZ3 HZ3 sing N N 322 TRP CH2 HH2 sing N N 323 TRP OXT HXT sing N N 324 TYR N CA sing N N 325 TYR N H sing N N 326 TYR N H2 sing N N 327 TYR CA C sing N N 328 TYR CA CB sing N N 329 TYR CA HA sing N N 330 TYR C O doub N N 331 TYR C OXT sing N N 332 TYR CB CG sing N N 333 TYR CB HB2 sing N N 334 TYR CB HB3 sing N N 335 TYR CG CD1 doub Y N 336 TYR CG CD2 sing Y N 337 TYR CD1 CE1 sing Y N 338 TYR CD1 HD1 sing N N 339 TYR CD2 CE2 doub Y N 340 TYR CD2 HD2 sing N N 341 TYR CE1 CZ doub Y N 342 TYR CE1 HE1 sing N N 343 TYR CE2 CZ sing Y N 344 TYR CE2 HE2 sing N N 345 TYR CZ OH sing N N 346 TYR OH HH sing N N 347 TYR OXT HXT sing N N 348 VAL N CA sing N N 349 VAL N H sing N N 350 VAL N H2 sing N N 351 VAL CA C sing N N 352 VAL CA CB sing N N 353 VAL CA HA sing N N 354 VAL C O doub N N 355 VAL C OXT sing N N 356 VAL CB CG1 sing N N 357 VAL CB CG2 sing N N 358 VAL CB HB sing N N 359 VAL CG1 HG11 sing N N 360 VAL CG1 HG12 sing N N 361 VAL CG1 HG13 sing N N 362 VAL CG2 HG21 sing N N 363 VAL CG2 HG22 sing N N 364 VAL CG2 HG23 sing N N 365 VAL OXT HXT sing N N 366 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 'SULFATE ION' SO4 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3CHY _pdbx_initial_refinement_model.details ? #