data_3GY5 # _entry.id 3GY5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3GY5 RCSB RCSB052452 WWPDB D_1000052452 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3GY2 . unspecified PDB 3GY3 . unspecified PDB 3GY4 . unspecified PDB 3GY6 . unspecified PDB 3GY7 . unspecified PDB 3GY8 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3GY5 _pdbx_database_status.recvd_initial_deposition_date 2009-04-03 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Perilo, C.S.' 1 'Pereira, M.T.' 2 'Santoro, M.M.' 3 'Nagem, R.A.P.' 4 # _citation.id primary _citation.title 'Structural binding evidence of the trypanocidal drugs Berenil and Pentacarinate active principles to a serine protease model.' _citation.journal_abbrev Int.J.Biol.Macromol. _citation.journal_volume 46 _citation.page_first 502 _citation.page_last 511 _citation.year 2010 _citation.journal_id_ASTM IJBMDR _citation.country UK _citation.journal_id_ISSN 0141-8130 _citation.journal_id_CSD 0708 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20356563 _citation.pdbx_database_id_DOI 10.1016/j.ijbiomac.2010.03.006 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Perilo, C.S.' 1 primary 'Pereira, M.T.' 2 primary 'Santoro, M.M.' 3 primary 'Nagem, R.A.' 4 # _cell.entry_id 3GY5 _cell.length_a 53.246 _cell.length_b 56.976 _cell.length_c 65.523 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3GY5 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Cationic trypsin' 23324.287 1 3.4.21.4 ? ? ? 2 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 3 non-polymer syn BERENIL 281.316 1 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 7 ? ? ? ? 5 non-polymer syn 'SULFATE ION' 96.063 6 ? ? ? ? 6 water nat water 18.015 330 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Beta-trypsin, Alpha-trypsin chain 1, Alpha-trypsin chain 2' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;IVGGYTCGANTVPYQVSLNSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNT LNNDIMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNM FCAGYLEGGKDSCQGDSGGPVVCSGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIASN ; _entity_poly.pdbx_seq_one_letter_code_can ;IVGGYTCGANTVPYQVSLNSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNT LNNDIMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNM FCAGYLEGGKDSCQGDSGGPVVCSGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIASN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ILE n 1 2 VAL n 1 3 GLY n 1 4 GLY n 1 5 TYR n 1 6 THR n 1 7 CYS n 1 8 GLY n 1 9 ALA n 1 10 ASN n 1 11 THR n 1 12 VAL n 1 13 PRO n 1 14 TYR n 1 15 GLN n 1 16 VAL n 1 17 SER n 1 18 LEU n 1 19 ASN n 1 20 SER n 1 21 GLY n 1 22 TYR n 1 23 HIS n 1 24 PHE n 1 25 CYS n 1 26 GLY n 1 27 GLY n 1 28 SER n 1 29 LEU n 1 30 ILE n 1 31 ASN n 1 32 SER n 1 33 GLN n 1 34 TRP n 1 35 VAL n 1 36 VAL n 1 37 SER n 1 38 ALA n 1 39 ALA n 1 40 HIS n 1 41 CYS n 1 42 TYR n 1 43 LYS n 1 44 SER n 1 45 GLY n 1 46 ILE n 1 47 GLN n 1 48 VAL n 1 49 ARG n 1 50 LEU n 1 51 GLY n 1 52 GLU n 1 53 ASP n 1 54 ASN n 1 55 ILE n 1 56 ASN n 1 57 VAL n 1 58 VAL n 1 59 GLU n 1 60 GLY n 1 61 ASN n 1 62 GLU n 1 63 GLN n 1 64 PHE n 1 65 ILE n 1 66 SER n 1 67 ALA n 1 68 SER n 1 69 LYS n 1 70 SER n 1 71 ILE n 1 72 VAL n 1 73 HIS n 1 74 PRO n 1 75 SER n 1 76 TYR n 1 77 ASN n 1 78 SER n 1 79 ASN n 1 80 THR n 1 81 LEU n 1 82 ASN n 1 83 ASN n 1 84 ASP n 1 85 ILE n 1 86 MET n 1 87 LEU n 1 88 ILE n 1 89 LYS n 1 90 LEU n 1 91 LYS n 1 92 SER n 1 93 ALA n 1 94 ALA n 1 95 SER n 1 96 LEU n 1 97 ASN n 1 98 SER n 1 99 ARG n 1 100 VAL n 1 101 ALA n 1 102 SER n 1 103 ILE n 1 104 SER n 1 105 LEU n 1 106 PRO n 1 107 THR n 1 108 SER n 1 109 CYS n 1 110 ALA n 1 111 SER n 1 112 ALA n 1 113 GLY n 1 114 THR n 1 115 GLN n 1 116 CYS n 1 117 LEU n 1 118 ILE n 1 119 SER n 1 120 GLY n 1 121 TRP n 1 122 GLY n 1 123 ASN n 1 124 THR n 1 125 LYS n 1 126 SER n 1 127 SER n 1 128 GLY n 1 129 THR n 1 130 SER n 1 131 TYR n 1 132 PRO n 1 133 ASP n 1 134 VAL n 1 135 LEU n 1 136 LYS n 1 137 CYS n 1 138 LEU n 1 139 LYS n 1 140 ALA n 1 141 PRO n 1 142 ILE n 1 143 LEU n 1 144 SER n 1 145 ASP n 1 146 SER n 1 147 SER n 1 148 CYS n 1 149 LYS n 1 150 SER n 1 151 ALA n 1 152 TYR n 1 153 PRO n 1 154 GLY n 1 155 GLN n 1 156 ILE n 1 157 THR n 1 158 SER n 1 159 ASN n 1 160 MET n 1 161 PHE n 1 162 CYS n 1 163 ALA n 1 164 GLY n 1 165 TYR n 1 166 LEU n 1 167 GLU n 1 168 GLY n 1 169 GLY n 1 170 LYS n 1 171 ASP n 1 172 SER n 1 173 CYS n 1 174 GLN n 1 175 GLY n 1 176 ASP n 1 177 SER n 1 178 GLY n 1 179 GLY n 1 180 PRO n 1 181 VAL n 1 182 VAL n 1 183 CYS n 1 184 SER n 1 185 GLY n 1 186 LYS n 1 187 LEU n 1 188 GLN n 1 189 GLY n 1 190 ILE n 1 191 VAL n 1 192 SER n 1 193 TRP n 1 194 GLY n 1 195 SER n 1 196 GLY n 1 197 CYS n 1 198 ALA n 1 199 GLN n 1 200 LYS n 1 201 ASN n 1 202 LYS n 1 203 PRO n 1 204 GLY n 1 205 VAL n 1 206 TYR n 1 207 THR n 1 208 LYS n 1 209 VAL n 1 210 CYS n 1 211 ASN n 1 212 TYR n 1 213 VAL n 1 214 SER n 1 215 TRP n 1 216 ILE n 1 217 LYS n 1 218 GLN n 1 219 THR n 1 220 ILE n 1 221 ALA n 1 222 SER n 1 223 ASN n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name bovine,cow _entity_src_nat.pdbx_organism_scientific 'Bos taurus' _entity_src_nat.pdbx_ncbi_taxonomy_id 9913 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details pancreatic # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TRY1_BOVIN _struct_ref.pdbx_db_accession P00760 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;IVGGYTCGANTVPYQVSLNSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNT LNNDIMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNM FCAGYLEGGKDSCQGDSGGPVVCSGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIASN ; _struct_ref.pdbx_align_begin 24 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3GY5 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 223 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00760 _struct_ref_seq.db_align_beg 24 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 246 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 16 _struct_ref_seq.pdbx_auth_seq_align_end 245 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BRN non-polymer . BERENIL ;DIMINAZINE ACETURATE; 1,3-TRIS-(4'AMIDINOPHENYL)TRIAZINE ; 'C14 H15 N7' 281.316 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3GY5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.13 _exptl_crystal.density_percent_sol 42.27 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_details '12% PEG8000, 0.1M ammonium sulfate, 0.05M Tris-HCl, 0.008M CaCl2, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2006-05-10 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator SI _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.428 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'LNLS BEAMLINE D03B-MX1' _diffrn_source.pdbx_synchrotron_site LNLS _diffrn_source.pdbx_synchrotron_beamline D03B-MX1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.428 # _reflns.entry_id 3GY5 _reflns.observed_criterion_sigma_I 2 _reflns.observed_criterion_sigma_F 2 _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 1.56 _reflns.number_obs 28596 _reflns.number_all 29077 _reflns.percent_possible_obs 98.35 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.049 _reflns.pdbx_netI_over_sigmaI 35.76 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.56 _reflns_shell.d_res_low 1.60 _reflns_shell.percent_possible_all 75.2 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.209 _reflns_shell.meanI_over_sigI_obs 8.17 _reflns_shell.pdbx_redundancy 6.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1431 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3GY5 _refine.ls_number_reflns_obs 27364 _refine.ls_number_reflns_all 28599 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 42.99 _refine.ls_d_res_high 1.57 _refine.ls_percent_reflns_obs 99.79 _refine.ls_R_factor_obs 0.16447 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.16309 _refine.ls_R_factor_R_free 0.19656 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.1 _refine.ls_number_reflns_R_free 1178 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.960 _refine.correlation_coeff_Fo_to_Fc_free 0.943 _refine.B_iso_mean 11.942 _refine.aniso_B[1][1] 0.08 _refine.aniso_B[2][2] -0.09 _refine.aniso_B[3][3] 0.01 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.087 _refine.pdbx_overall_ESU_R_Free 0.087 _refine.overall_SU_ML 0.052 _refine.overall_SU_B 1.395 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1629 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 80 _refine_hist.number_atoms_solvent 330 _refine_hist.number_atoms_total 2039 _refine_hist.d_res_high 1.57 _refine_hist.d_res_low 42.99 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.011 0.022 ? 1812 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.412 1.981 ? 2462 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.575 5.000 ? 243 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.625 26.190 ? 63 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 12.552 15.000 ? 292 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 23.676 15.000 ? 2 'X-RAY DIFFRACTION' ? r_chiral_restr 0.107 0.200 ? 270 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 1325 'X-RAY DIFFRACTION' ? r_nbd_refined 0.271 0.200 ? 1277 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.321 0.200 ? 1289 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.121 0.200 ? 426 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.223 0.200 ? 5 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.206 0.200 ? 89 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.122 0.200 ? 53 'X-RAY DIFFRACTION' ? r_mcbond_it 0.673 1.500 ? 1154 'X-RAY DIFFRACTION' ? r_mcangle_it 1.067 2.000 ? 1844 'X-RAY DIFFRACTION' ? r_scbond_it 1.849 3.000 ? 735 'X-RAY DIFFRACTION' ? r_scangle_it 2.682 4.500 ? 605 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.57 _refine_ls_shell.d_res_low 1.608 _refine_ls_shell.number_reflns_R_work 1917 _refine_ls_shell.R_factor_R_work 0.241 _refine_ls_shell.percent_reflns_obs 97.37 _refine_ls_shell.R_factor_R_free 0.284 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 85 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3GY5 _struct.title ;A comparative study on the inhibition of bovine beta-trypsin by bis-benzamidines diminazene and pentamidine by X-ray crystallography and ITC ; _struct.pdbx_descriptor 'Cationic trypsin (E.C.3.4.21.4)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3GY5 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text ;bovine beta-trypsin, berenil, diminazene, protein-ligand complex, protein-ligand interaction, Calcium, Digestion, Disulfide bond, Hydrolase, Metal-binding, Protease, Secreted, Serine protease, Zymogen ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 5 ? L N N 5 ? M N N 5 ? N N N 5 ? O N N 5 ? P N N 5 ? Q N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 38 ? TYR A 42 ? ALA A 55 TYR A 59 5 ? 5 HELX_P HELX_P2 2 SER A 144 ? TYR A 152 ? SER A 164 TYR A 172 1 ? 9 HELX_P HELX_P3 3 TYR A 212 ? ASN A 223 ? TYR A 234 ASN A 245 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 7 SG ? ? ? 1_555 A CYS 137 SG ? ? A CYS 22 A CYS 157 1_555 ? ? ? ? ? ? ? 2.031 ? disulf2 disulf ? ? A CYS 25 SG ? ? ? 1_555 A CYS 41 SG ? ? A CYS 42 A CYS 58 1_555 ? ? ? ? ? ? ? 2.015 ? disulf3 disulf ? ? A CYS 109 SG ? ? ? 1_555 A CYS 210 SG ? ? A CYS 128 A CYS 232 1_555 ? ? ? ? ? ? ? 2.031 ? disulf4 disulf ? ? A CYS 116 SG ? ? ? 1_555 A CYS 183 SG ? ? A CYS 136 A CYS 201 1_555 ? ? ? ? ? ? ? 2.017 ? disulf5 disulf ? ? A CYS 148 SG ? ? ? 1_555 A CYS 162 SG ? ? A CYS 168 A CYS 182 1_555 ? ? ? ? ? ? ? 2.011 ? disulf6 disulf ? ? A CYS 173 SG ? ? ? 1_555 A CYS 197 SG ? ? A CYS 191 A CYS 220 1_555 ? ? ? ? ? ? ? 2.034 ? metalc1 metalc ? ? A GLU 52 OE1 ? ? ? 1_555 B CA . CA ? ? A GLU 70 A CA 1 1_555 ? ? ? ? ? ? ? 2.020 ? metalc2 metalc ? ? A ASN 54 O ? ? ? 1_555 B CA . CA ? ? A ASN 72 A CA 1 1_555 ? ? ? ? ? ? ? 2.275 ? metalc3 metalc ? ? A VAL 57 O ? ? ? 1_555 B CA . CA ? ? A VAL 75 A CA 1 1_555 ? ? ? ? ? ? ? 2.234 ? metalc4 metalc ? ? A GLU 62 OE2 ? ? ? 1_555 B CA . CA ? ? A GLU 80 A CA 1 1_555 ? ? ? ? ? ? ? 2.256 ? metalc5 metalc ? ? B CA . CA ? ? ? 1_555 Q HOH . O ? ? A CA 1 A HOH 304 1_555 ? ? ? ? ? ? ? 2.346 ? metalc6 metalc ? ? B CA . CA ? ? ? 1_555 Q HOH . O ? ? A CA 1 A HOH 15 1_555 ? ? ? ? ? ? ? 2.423 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 5 ? THR A 6 ? TYR A 20 THR A 21 A 2 LYS A 136 ? PRO A 141 ? LYS A 156 PRO A 161 A 3 GLN A 115 ? GLY A 120 ? GLN A 135 GLY A 140 A 4 PRO A 180 ? CYS A 183 ? PRO A 198 CYS A 201 A 5 LYS A 186 ? TRP A 193 ? LYS A 204 TRP A 215 A 6 GLY A 204 ? LYS A 208 ? GLY A 226 LYS A 230 A 7 MET A 160 ? ALA A 163 ? MET A 180 ALA A 183 B 1 GLN A 15 ? ASN A 19 ? GLN A 30 ASN A 34 B 2 HIS A 23 ? ASN A 31 ? HIS A 40 ASN A 48 B 3 TRP A 34 ? SER A 37 ? TRP A 51 SER A 54 B 4 MET A 86 ? LEU A 90 ? MET A 104 LEU A 108 B 5 GLN A 63 ? VAL A 72 ? GLN A 81 VAL A 90 B 6 GLN A 47 ? LEU A 50 ? GLN A 64 LEU A 67 B 7 GLN A 15 ? ASN A 19 ? GLN A 30 ASN A 34 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 5 ? N TYR A 20 O CYS A 137 ? O CYS A 157 A 2 3 O LEU A 138 ? O LEU A 158 N ILE A 118 ? N ILE A 138 A 3 4 N LEU A 117 ? N LEU A 137 O VAL A 182 ? O VAL A 200 A 4 5 N CYS A 183 ? N CYS A 201 O LYS A 186 ? O LYS A 204 A 5 6 N TRP A 193 ? N TRP A 215 O VAL A 205 ? O VAL A 227 A 6 7 O TYR A 206 ? O TYR A 228 N PHE A 161 ? N PHE A 181 B 1 2 N LEU A 18 ? N LEU A 33 O CYS A 25 ? O CYS A 42 B 2 3 N SER A 28 ? N SER A 45 O VAL A 36 ? O VAL A 53 B 3 4 N VAL A 35 ? N VAL A 52 O ILE A 88 ? O ILE A 106 B 4 5 O LEU A 87 ? O LEU A 105 N ILE A 71 ? N ILE A 89 B 5 6 O GLN A 63 ? O GLN A 81 N LEU A 50 ? N LEU A 67 B 6 7 O ARG A 49 ? O ARG A 66 N SER A 17 ? N SER A 32 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE CA A 1' AC2 Software ? ? ? ? 17 'BINDING SITE FOR RESIDUE BRN A 246' AC3 Software ? ? ? ? 10 'BINDING SITE FOR RESIDUE EDO A 247' AC4 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE EDO A 2' AC5 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE EDO A 3' AC6 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE EDO A 4' AC7 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE EDO A 5' AC8 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE EDO A 6' AC9 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE EDO A 7' BC1 Software ? ? ? ? 9 'BINDING SITE FOR RESIDUE SO4 A 248' BC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE SO4 A 249' BC3 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE SO4 A 250' BC4 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE SO4 A 251' BC5 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE SO4 A 252' BC6 Software ? ? ? ? 11 'BINDING SITE FOR RESIDUE SO4 A 253' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 HOH Q . ? HOH A 15 . ? 1_555 ? 2 AC1 6 GLU A 52 ? GLU A 70 . ? 1_555 ? 3 AC1 6 ASN A 54 ? ASN A 72 . ? 1_555 ? 4 AC1 6 VAL A 57 ? VAL A 75 . ? 1_555 ? 5 AC1 6 GLU A 62 ? GLU A 80 . ? 1_555 ? 6 AC1 6 HOH Q . ? HOH A 304 . ? 1_555 ? 7 AC2 17 HIS A 40 ? HIS A 57 . ? 1_555 ? 8 AC2 17 SER A 78 ? SER A 96 . ? 1_555 ? 9 AC2 17 ASP A 171 ? ASP A 189 . ? 1_555 ? 10 AC2 17 SER A 172 ? SER A 190 . ? 1_555 ? 11 AC2 17 CYS A 173 ? CYS A 191 . ? 1_555 ? 12 AC2 17 GLN A 174 ? GLN A 192 . ? 1_555 ? 13 AC2 17 SER A 177 ? SER A 195 . ? 1_555 ? 14 AC2 17 VAL A 191 ? VAL A 213 . ? 1_555 ? 15 AC2 17 SER A 192 ? SER A 214 . ? 1_555 ? 16 AC2 17 TRP A 193 ? TRP A 215 . ? 1_555 ? 17 AC2 17 GLY A 194 ? GLY A 216 . ? 1_555 ? 18 AC2 17 GLY A 196 ? GLY A 219 . ? 1_555 ? 19 AC2 17 GLY A 204 ? GLY A 226 . ? 1_555 ? 20 AC2 17 SO4 O . ? SO4 A 252 . ? 1_555 ? 21 AC2 17 HOH Q . ? HOH A 289 . ? 1_555 ? 22 AC2 17 HOH Q . ? HOH A 492 . ? 1_555 ? 23 AC2 17 HOH Q . ? HOH A 512 . ? 3_555 ? 24 AC3 10 EDO E . ? EDO A 2 . ? 1_555 ? 25 AC3 10 HOH Q . ? HOH A 15 . ? 1_555 ? 26 AC3 10 ARG A 49 ? ARG A 66 . ? 1_555 ? 27 AC3 10 ILE A 55 ? ILE A 73 . ? 1_555 ? 28 AC3 10 ASN A 56 ? ASN A 74 . ? 1_555 ? 29 AC3 10 VAL A 58 ? VAL A 76 . ? 1_555 ? 30 AC3 10 VAL A 72 ? VAL A 90 . ? 4_456 ? 31 AC3 10 HIS A 73 ? HIS A 91 . ? 4_456 ? 32 AC3 10 PRO A 74 ? PRO A 92 . ? 4_456 ? 33 AC3 10 HOH Q . ? HOH A 482 . ? 4_456 ? 34 AC4 8 TYR A 22 ? TYR A 39 . ? 1_555 ? 35 AC4 8 HIS A 23 ? HIS A 40 . ? 1_555 ? 36 AC4 8 ILE A 55 ? ILE A 73 . ? 1_555 ? 37 AC4 8 ASN A 56 ? ASN A 74 . ? 1_555 ? 38 AC4 8 VAL A 72 ? VAL A 90 . ? 4_456 ? 39 AC4 8 EDO D . ? EDO A 247 . ? 1_555 ? 40 AC4 8 HOH Q . ? HOH A 378 . ? 1_555 ? 41 AC4 8 HOH Q . ? HOH A 430 . ? 4_456 ? 42 AC5 7 VAL A 58 ? VAL A 76 . ? 1_555 ? 43 AC5 7 PHE A 64 ? PHE A 82 . ? 1_555 ? 44 AC5 7 HOH Q . ? HOH A 314 . ? 1_555 ? 45 AC5 7 HOH Q . ? HOH A 368 . ? 1_555 ? 46 AC5 7 HOH Q . ? HOH A 481 . ? 4_456 ? 47 AC5 7 HOH Q . ? HOH A 495 . ? 1_555 ? 48 AC5 7 HOH Q . ? HOH A 502 . ? 1_555 ? 49 AC6 4 LYS A 125 ? LYS A 145 . ? 1_555 ? 50 AC6 4 SER A 126 ? SER A 146 . ? 1_555 ? 51 AC6 4 SER A 127 ? SER A 147 . ? 1_555 ? 52 AC6 4 HOH Q . ? HOH A 473 . ? 1_555 ? 53 AC7 7 VAL A 58 ? VAL A 76 . ? 1_555 ? 54 AC7 7 ASN A 77 ? ASN A 95 . ? 4_456 ? 55 AC7 7 SER A 78 ? SER A 96 . ? 4_456 ? 56 AC7 7 ASN A 79 ? ASN A 97 . ? 4_456 ? 57 AC7 7 HOH Q . ? HOH A 295 . ? 4_456 ? 58 AC7 7 HOH Q . ? HOH A 481 . ? 4_456 ? 59 AC7 7 HOH Q . ? HOH A 537 . ? 1_555 ? 60 AC8 8 CYS A 109 ? CYS A 128 . ? 1_555 ? 61 AC8 8 ALA A 110 ? ALA A 129 . ? 1_555 ? 62 AC8 8 ILE A 142 ? ILE A 162 . ? 1_555 ? 63 AC8 8 PHE A 161 ? PHE A 181 . ? 1_555 ? 64 AC8 8 GLN A 188 ? GLN A 210 . ? 1_555 ? 65 AC8 8 LYS A 208 ? LYS A 230 . ? 1_555 ? 66 AC8 8 HOH Q . ? HOH A 308 . ? 1_555 ? 67 AC8 8 HOH Q . ? HOH A 391 . ? 1_555 ? 68 AC9 8 ASN A 79 ? ASN A 97 . ? 1_555 ? 69 AC9 8 THR A 80 ? THR A 98 . ? 1_555 ? 70 AC9 8 LYS A 139 ? LYS A 159 . ? 3_555 ? 71 AC9 8 GLN A 155 ? GLN A 175 . ? 1_555 ? 72 AC9 8 TRP A 193 ? TRP A 215 . ? 1_555 ? 73 AC9 8 SO4 P . ? SO4 A 253 . ? 1_555 ? 74 AC9 8 HOH Q . ? HOH A 549 . ? 3_555 ? 75 AC9 8 HOH Q . ? HOH A 563 . ? 3_555 ? 76 BC1 9 PRO A 106 ? PRO A 124 . ? 1_555 ? 77 BC1 9 THR A 107 ? THR A 125 . ? 1_555 ? 78 BC1 9 SER A 108 ? SER A 127 . ? 1_555 ? 79 BC1 9 SER A 127 ? SER A 147 . ? 3_545 ? 80 BC1 9 GLY A 128 ? GLY A 148 . ? 3_545 ? 81 BC1 9 LYS A 186 ? LYS A 204 . ? 1_555 ? 82 BC1 9 HOH Q . ? HOH A 398 . ? 1_555 ? 83 BC1 9 HOH Q . ? HOH A 499 . ? 3_545 ? 84 BC1 9 HOH Q . ? HOH A 513 . ? 1_555 ? 85 BC2 6 LYS A 149 ? LYS A 169 . ? 1_555 ? 86 BC2 6 PRO A 153 ? PRO A 173 . ? 1_555 ? 87 BC2 6 GLY A 154 ? GLY A 174 . ? 1_555 ? 88 BC2 6 HOH Q . ? HOH A 374 . ? 1_555 ? 89 BC2 6 HOH Q . ? HOH A 415 . ? 1_555 ? 90 BC2 6 HOH Q . ? HOH A 463 . ? 1_555 ? 91 BC3 8 LYS A 69 ? LYS A 87 . ? 2_554 ? 92 BC3 8 LYS A 89 ? LYS A 107 . ? 2_554 ? 93 BC3 8 THR A 129 ? THR A 149 . ? 3_545 ? 94 BC3 8 HOH Q . ? HOH A 377 . ? 3_545 ? 95 BC3 8 HOH Q . ? HOH A 396 . ? 2_554 ? 96 BC3 8 HOH Q . ? HOH A 444 . ? 1_555 ? 97 BC3 8 HOH Q . ? HOH A 523 . ? 1_555 ? 98 BC3 8 HOH Q . ? HOH A 565 . ? 3_545 ? 99 BC4 4 THR A 157 ? THR A 177 . ? 1_555 ? 100 BC4 4 SER A 158 ? SER A 178 . ? 1_555 ? 101 BC4 4 HOH Q . ? HOH A 465 . ? 1_555 ? 102 BC4 4 HOH Q . ? HOH A 498 . ? 1_555 ? 103 BC5 8 HIS A 40 ? HIS A 57 . ? 1_555 ? 104 BC5 8 GLN A 174 ? GLN A 192 . ? 1_555 ? 105 BC5 8 GLY A 175 ? GLY A 193 . ? 1_555 ? 106 BC5 8 SER A 177 ? SER A 195 . ? 1_555 ? 107 BC5 8 BRN C . ? BRN A 246 . ? 1_555 ? 108 BC5 8 HOH Q . ? HOH A 360 . ? 1_555 ? 109 BC5 8 HOH Q . ? HOH A 361 . ? 1_555 ? 110 BC5 8 HOH Q . ? HOH A 362 . ? 1_555 ? 111 BC6 11 EDO J . ? EDO A 7 . ? 1_555 ? 112 BC6 11 TYR A 5 ? TYR A 20 . ? 3_555 ? 113 BC6 11 CYS A 7 ? CYS A 22 . ? 3_555 ? 114 BC6 11 THR A 11 ? THR A 26 . ? 3_555 ? 115 BC6 11 VAL A 12 ? VAL A 27 . ? 3_555 ? 116 BC6 11 LEU A 117 ? LEU A 137 . ? 3_555 ? 117 BC6 11 CYS A 137 ? CYS A 157 . ? 3_555 ? 118 BC6 11 GLN A 155 ? GLN A 175 . ? 1_555 ? 119 BC6 11 HOH Q . ? HOH A 330 . ? 1_555 ? 120 BC6 11 HOH Q . ? HOH A 386 . ? 3_555 ? 121 BC6 11 HOH Q . ? HOH A 549 . ? 3_555 ? # _database_PDB_matrix.entry_id 3GY5 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3GY5 _atom_sites.fract_transf_matrix[1][1] 0.018781 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017551 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015262 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ILE 1 16 16 ILE ILE A . n A 1 2 VAL 2 17 17 VAL VAL A . n A 1 3 GLY 3 18 18 GLY GLY A . n A 1 4 GLY 4 19 19 GLY GLY A . n A 1 5 TYR 5 20 20 TYR TYR A . n A 1 6 THR 6 21 21 THR THR A . n A 1 7 CYS 7 22 22 CYS CYS A . n A 1 8 GLY 8 23 23 GLY GLY A . n A 1 9 ALA 9 24 24 ALA ALA A . n A 1 10 ASN 10 25 25 ASN ASN A . n A 1 11 THR 11 26 26 THR THR A . n A 1 12 VAL 12 27 27 VAL VAL A . n A 1 13 PRO 13 28 28 PRO PRO A . n A 1 14 TYR 14 29 29 TYR TYR A . n A 1 15 GLN 15 30 30 GLN GLN A . n A 1 16 VAL 16 31 31 VAL VAL A . n A 1 17 SER 17 32 32 SER SER A . n A 1 18 LEU 18 33 33 LEU LEU A . n A 1 19 ASN 19 34 34 ASN ASN A . n A 1 20 SER 20 37 37 SER SER A . n A 1 21 GLY 21 38 38 GLY GLY A . n A 1 22 TYR 22 39 39 TYR TYR A . n A 1 23 HIS 23 40 40 HIS HIS A . n A 1 24 PHE 24 41 41 PHE PHE A . n A 1 25 CYS 25 42 42 CYS CYS A . n A 1 26 GLY 26 43 43 GLY GLY A . n A 1 27 GLY 27 44 44 GLY GLY A . n A 1 28 SER 28 45 45 SER SER A . n A 1 29 LEU 29 46 46 LEU LEU A . n A 1 30 ILE 30 47 47 ILE ILE A . n A 1 31 ASN 31 48 48 ASN ASN A . n A 1 32 SER 32 49 49 SER SER A . n A 1 33 GLN 33 50 50 GLN GLN A . n A 1 34 TRP 34 51 51 TRP TRP A . n A 1 35 VAL 35 52 52 VAL VAL A . n A 1 36 VAL 36 53 53 VAL VAL A . n A 1 37 SER 37 54 54 SER SER A . n A 1 38 ALA 38 55 55 ALA ALA A . n A 1 39 ALA 39 56 56 ALA ALA A . n A 1 40 HIS 40 57 57 HIS HIS A . n A 1 41 CYS 41 58 58 CYS CYS A . n A 1 42 TYR 42 59 59 TYR TYR A . n A 1 43 LYS 43 60 60 LYS LYS A . n A 1 44 SER 44 61 61 SER SER A . n A 1 45 GLY 45 62 62 GLY GLY A . n A 1 46 ILE 46 63 63 ILE ILE A . n A 1 47 GLN 47 64 64 GLN GLN A . n A 1 48 VAL 48 65 65 VAL VAL A . n A 1 49 ARG 49 66 66 ARG ARG A . n A 1 50 LEU 50 67 67 LEU LEU A . n A 1 51 GLY 51 69 69 GLY GLY A . n A 1 52 GLU 52 70 70 GLU GLU A . n A 1 53 ASP 53 71 71 ASP ASP A . n A 1 54 ASN 54 72 72 ASN ASN A . n A 1 55 ILE 55 73 73 ILE ILE A . n A 1 56 ASN 56 74 74 ASN ASN A . n A 1 57 VAL 57 75 75 VAL VAL A . n A 1 58 VAL 58 76 76 VAL VAL A . n A 1 59 GLU 59 77 77 GLU GLU A . n A 1 60 GLY 60 78 78 GLY GLY A . n A 1 61 ASN 61 79 79 ASN ASN A . n A 1 62 GLU 62 80 80 GLU GLU A . n A 1 63 GLN 63 81 81 GLN GLN A . n A 1 64 PHE 64 82 82 PHE PHE A . n A 1 65 ILE 65 83 83 ILE ILE A . n A 1 66 SER 66 84 84 SER SER A . n A 1 67 ALA 67 85 85 ALA ALA A . n A 1 68 SER 68 86 86 SER SER A . n A 1 69 LYS 69 87 87 LYS LYS A . n A 1 70 SER 70 88 88 SER SER A . n A 1 71 ILE 71 89 89 ILE ILE A . n A 1 72 VAL 72 90 90 VAL VAL A . n A 1 73 HIS 73 91 91 HIS HIS A . n A 1 74 PRO 74 92 92 PRO PRO A . n A 1 75 SER 75 93 93 SER SER A . n A 1 76 TYR 76 94 94 TYR TYR A . n A 1 77 ASN 77 95 95 ASN ASN A . n A 1 78 SER 78 96 96 SER SER A . n A 1 79 ASN 79 97 97 ASN ASN A . n A 1 80 THR 80 98 98 THR THR A . n A 1 81 LEU 81 99 99 LEU LEU A . n A 1 82 ASN 82 100 100 ASN ASN A . n A 1 83 ASN 83 101 101 ASN ASN A . n A 1 84 ASP 84 102 102 ASP ASP A . n A 1 85 ILE 85 103 103 ILE ILE A . n A 1 86 MET 86 104 104 MET MET A . n A 1 87 LEU 87 105 105 LEU LEU A . n A 1 88 ILE 88 106 106 ILE ILE A . n A 1 89 LYS 89 107 107 LYS LYS A . n A 1 90 LEU 90 108 108 LEU LEU A . n A 1 91 LYS 91 109 109 LYS LYS A . n A 1 92 SER 92 110 110 SER SER A . n A 1 93 ALA 93 111 111 ALA ALA A . n A 1 94 ALA 94 112 112 ALA ALA A . n A 1 95 SER 95 113 113 SER SER A . n A 1 96 LEU 96 114 114 LEU LEU A . n A 1 97 ASN 97 115 115 ASN ASN A . n A 1 98 SER 98 116 116 SER SER A . n A 1 99 ARG 99 117 117 ARG ARG A . n A 1 100 VAL 100 118 118 VAL VAL A . n A 1 101 ALA 101 119 119 ALA ALA A . n A 1 102 SER 102 120 120 SER SER A . n A 1 103 ILE 103 121 121 ILE ILE A . n A 1 104 SER 104 122 122 SER SER A . n A 1 105 LEU 105 123 123 LEU LEU A . n A 1 106 PRO 106 124 124 PRO PRO A . n A 1 107 THR 107 125 125 THR THR A . n A 1 108 SER 108 127 127 SER SER A . n A 1 109 CYS 109 128 128 CYS CYS A . n A 1 110 ALA 110 129 129 ALA ALA A . n A 1 111 SER 111 130 130 SER SER A . n A 1 112 ALA 112 132 132 ALA ALA A . n A 1 113 GLY 113 133 133 GLY GLY A . n A 1 114 THR 114 134 134 THR THR A . n A 1 115 GLN 115 135 135 GLN GLN A . n A 1 116 CYS 116 136 136 CYS CYS A . n A 1 117 LEU 117 137 137 LEU LEU A . n A 1 118 ILE 118 138 138 ILE ILE A . n A 1 119 SER 119 139 139 SER SER A . n A 1 120 GLY 120 140 140 GLY GLY A . n A 1 121 TRP 121 141 141 TRP TRP A . n A 1 122 GLY 122 142 142 GLY GLY A . n A 1 123 ASN 123 143 143 ASN ASN A . n A 1 124 THR 124 144 144 THR THR A . n A 1 125 LYS 125 145 145 LYS LYS A . n A 1 126 SER 126 146 146 SER SER A . n A 1 127 SER 127 147 147 SER SER A . n A 1 128 GLY 128 148 148 GLY GLY A . n A 1 129 THR 129 149 149 THR THR A . n A 1 130 SER 130 150 150 SER SER A . n A 1 131 TYR 131 151 151 TYR TYR A . n A 1 132 PRO 132 152 152 PRO PRO A . n A 1 133 ASP 133 153 153 ASP ASP A . n A 1 134 VAL 134 154 154 VAL VAL A . n A 1 135 LEU 135 155 155 LEU LEU A . n A 1 136 LYS 136 156 156 LYS LYS A . n A 1 137 CYS 137 157 157 CYS CYS A . n A 1 138 LEU 138 158 158 LEU LEU A . n A 1 139 LYS 139 159 159 LYS LYS A . n A 1 140 ALA 140 160 160 ALA ALA A . n A 1 141 PRO 141 161 161 PRO PRO A . n A 1 142 ILE 142 162 162 ILE ILE A . n A 1 143 LEU 143 163 163 LEU LEU A . n A 1 144 SER 144 164 164 SER SER A . n A 1 145 ASP 145 165 165 ASP ASP A . n A 1 146 SER 146 166 166 SER SER A . n A 1 147 SER 147 167 167 SER SER A . n A 1 148 CYS 148 168 168 CYS CYS A . n A 1 149 LYS 149 169 169 LYS LYS A . n A 1 150 SER 150 170 170 SER SER A . n A 1 151 ALA 151 171 171 ALA ALA A . n A 1 152 TYR 152 172 172 TYR TYR A . n A 1 153 PRO 153 173 173 PRO PRO A . n A 1 154 GLY 154 174 174 GLY GLY A . n A 1 155 GLN 155 175 175 GLN GLN A . n A 1 156 ILE 156 176 176 ILE ILE A . n A 1 157 THR 157 177 177 THR THR A . n A 1 158 SER 158 178 178 SER SER A . n A 1 159 ASN 159 179 179 ASN ASN A . n A 1 160 MET 160 180 180 MET MET A . n A 1 161 PHE 161 181 181 PHE PHE A . n A 1 162 CYS 162 182 182 CYS CYS A . n A 1 163 ALA 163 183 183 ALA ALA A . n A 1 164 GLY 164 184 184 GLY GLY A A n A 1 165 TYR 165 184 184 TYR TYR A . n A 1 166 LEU 166 185 185 LEU LEU A . n A 1 167 GLU 167 186 186 GLU GLU A . n A 1 168 GLY 168 187 187 GLY GLY A . n A 1 169 GLY 169 188 188 GLY GLY A A n A 1 170 LYS 170 188 188 LYS LYS A . n A 1 171 ASP 171 189 189 ASP ASP A . n A 1 172 SER 172 190 190 SER SER A . n A 1 173 CYS 173 191 191 CYS CYS A . n A 1 174 GLN 174 192 192 GLN GLN A . n A 1 175 GLY 175 193 193 GLY GLY A . n A 1 176 ASP 176 194 194 ASP ASP A . n A 1 177 SER 177 195 195 SER SER A . n A 1 178 GLY 178 196 196 GLY GLY A . n A 1 179 GLY 179 197 197 GLY GLY A . n A 1 180 PRO 180 198 198 PRO PRO A . n A 1 181 VAL 181 199 199 VAL VAL A . n A 1 182 VAL 182 200 200 VAL VAL A . n A 1 183 CYS 183 201 201 CYS CYS A . n A 1 184 SER 184 202 202 SER SER A . n A 1 185 GLY 185 203 203 GLY GLY A . n A 1 186 LYS 186 204 204 LYS LYS A . n A 1 187 LEU 187 209 209 LEU LEU A . n A 1 188 GLN 188 210 210 GLN GLN A . n A 1 189 GLY 189 211 211 GLY GLY A . n A 1 190 ILE 190 212 212 ILE ILE A . n A 1 191 VAL 191 213 213 VAL VAL A . n A 1 192 SER 192 214 214 SER SER A . n A 1 193 TRP 193 215 215 TRP TRP A . n A 1 194 GLY 194 216 216 GLY GLY A . n A 1 195 SER 195 217 217 SER SER A . n A 1 196 GLY 196 219 219 GLY GLY A . n A 1 197 CYS 197 220 220 CYS CYS A . n A 1 198 ALA 198 221 221 ALA ALA A A n A 1 199 GLN 199 221 221 GLN GLN A . n A 1 200 LYS 200 222 222 LYS LYS A . n A 1 201 ASN 201 223 223 ASN ASN A . n A 1 202 LYS 202 224 224 LYS LYS A . n A 1 203 PRO 203 225 225 PRO PRO A . n A 1 204 GLY 204 226 226 GLY GLY A . n A 1 205 VAL 205 227 227 VAL VAL A . n A 1 206 TYR 206 228 228 TYR TYR A . n A 1 207 THR 207 229 229 THR THR A . n A 1 208 LYS 208 230 230 LYS LYS A . n A 1 209 VAL 209 231 231 VAL VAL A . n A 1 210 CYS 210 232 232 CYS CYS A . n A 1 211 ASN 211 233 233 ASN ASN A . n A 1 212 TYR 212 234 234 TYR TYR A . n A 1 213 VAL 213 235 235 VAL VAL A . n A 1 214 SER 214 236 236 SER SER A . n A 1 215 TRP 215 237 237 TRP TRP A . n A 1 216 ILE 216 238 238 ILE ILE A . n A 1 217 LYS 217 239 239 LYS LYS A . n A 1 218 GLN 218 240 240 GLN GLN A . n A 1 219 THR 219 241 241 THR THR A . n A 1 220 ILE 220 242 242 ILE ILE A . n A 1 221 ALA 221 243 243 ALA ALA A . n A 1 222 SER 222 244 244 SER SER A . n A 1 223 ASN 223 245 245 ASN ASN A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE1 ? A GLU 52 ? A GLU 70 ? 1_555 CA ? B CA . ? A CA 1 ? 1_555 O ? A ASN 54 ? A ASN 72 ? 1_555 91.5 ? 2 OE1 ? A GLU 52 ? A GLU 70 ? 1_555 CA ? B CA . ? A CA 1 ? 1_555 O ? A VAL 57 ? A VAL 75 ? 1_555 160.3 ? 3 O ? A ASN 54 ? A ASN 72 ? 1_555 CA ? B CA . ? A CA 1 ? 1_555 O ? A VAL 57 ? A VAL 75 ? 1_555 80.0 ? 4 OE1 ? A GLU 52 ? A GLU 70 ? 1_555 CA ? B CA . ? A CA 1 ? 1_555 OE2 ? A GLU 62 ? A GLU 80 ? 1_555 104.5 ? 5 O ? A ASN 54 ? A ASN 72 ? 1_555 CA ? B CA . ? A CA 1 ? 1_555 OE2 ? A GLU 62 ? A GLU 80 ? 1_555 159.6 ? 6 O ? A VAL 57 ? A VAL 75 ? 1_555 CA ? B CA . ? A CA 1 ? 1_555 OE2 ? A GLU 62 ? A GLU 80 ? 1_555 88.2 ? 7 OE1 ? A GLU 52 ? A GLU 70 ? 1_555 CA ? B CA . ? A CA 1 ? 1_555 O ? Q HOH . ? A HOH 304 ? 1_555 91.4 ? 8 O ? A ASN 54 ? A ASN 72 ? 1_555 CA ? B CA . ? A CA 1 ? 1_555 O ? Q HOH . ? A HOH 304 ? 1_555 88.7 ? 9 O ? A VAL 57 ? A VAL 75 ? 1_555 CA ? B CA . ? A CA 1 ? 1_555 O ? Q HOH . ? A HOH 304 ? 1_555 106.0 ? 10 OE2 ? A GLU 62 ? A GLU 80 ? 1_555 CA ? B CA . ? A CA 1 ? 1_555 O ? Q HOH . ? A HOH 304 ? 1_555 78.5 ? 11 OE1 ? A GLU 52 ? A GLU 70 ? 1_555 CA ? B CA . ? A CA 1 ? 1_555 O ? Q HOH . ? A HOH 15 ? 1_555 75.9 ? 12 O ? A ASN 54 ? A ASN 72 ? 1_555 CA ? B CA . ? A CA 1 ? 1_555 O ? Q HOH . ? A HOH 15 ? 1_555 104.6 ? 13 O ? A VAL 57 ? A VAL 75 ? 1_555 CA ? B CA . ? A CA 1 ? 1_555 O ? Q HOH . ? A HOH 15 ? 1_555 89.0 ? 14 OE2 ? A GLU 62 ? A GLU 80 ? 1_555 CA ? B CA . ? A CA 1 ? 1_555 O ? Q HOH . ? A HOH 15 ? 1_555 91.8 ? 15 O ? Q HOH . ? A HOH 304 ? 1_555 CA ? B CA . ? A CA 1 ? 1_555 O ? Q HOH . ? A HOH 15 ? 1_555 161.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-03-23 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 AMoRE phasing . ? 2 REFMAC refinement 5.0 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C A GLY 69 ? ? O A GLY 69 ? ? 1.118 1.232 -0.114 0.016 N 2 1 C A SER 130 ? ? N A ALA 132 ? ? 1.528 1.336 0.192 0.023 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 71 ? ? -108.59 -81.23 2 1 ASN A 115 ? ? -144.42 -136.74 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 LEU _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 114 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 ASN _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 115 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 141.45 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 BERENIL BRN 4 1,2-ETHANEDIOL EDO 5 'SULFATE ION' SO4 6 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 1 1 CA CA A . C 3 BRN 1 246 1 BRN BRN A . D 4 EDO 1 247 1 EDO EDO A . E 4 EDO 1 2 2 EDO EDO A . F 4 EDO 1 3 3 EDO EDO A . G 4 EDO 1 4 4 EDO EDO A . H 4 EDO 1 5 5 EDO EDO A . I 4 EDO 1 6 6 EDO EDO A . J 4 EDO 1 7 7 EDO EDO A . K 5 SO4 1 248 1 SO4 SO4 A . L 5 SO4 1 249 2 SO4 SO4 A . M 5 SO4 1 250 3 SO4 SO4 A . N 5 SO4 1 251 4 SO4 SO4 A . O 5 SO4 1 252 5 SO4 SO4 A . P 5 SO4 1 253 6 SO4 SO4 A . Q 6 HOH 1 8 8 HOH HOH A . Q 6 HOH 2 9 9 HOH HOH A . Q 6 HOH 3 10 10 HOH HOH A . Q 6 HOH 4 11 11 HOH HOH A . Q 6 HOH 5 12 12 HOH HOH A . Q 6 HOH 6 13 13 HOH HOH A . Q 6 HOH 7 14 14 HOH HOH A . Q 6 HOH 8 15 15 HOH HOH A . Q 6 HOH 9 35 35 HOH HOH A . Q 6 HOH 10 36 36 HOH HOH A . Q 6 HOH 11 68 68 HOH HOH A . Q 6 HOH 12 126 126 HOH HOH A . Q 6 HOH 13 131 131 HOH HOH A . Q 6 HOH 14 205 205 HOH HOH A . Q 6 HOH 15 208 208 HOH HOH A . Q 6 HOH 16 218 218 HOH HOH A . Q 6 HOH 17 254 254 HOH HOH A . Q 6 HOH 18 255 255 HOH HOH A . Q 6 HOH 19 256 256 HOH HOH A . Q 6 HOH 20 257 257 HOH HOH A . Q 6 HOH 21 258 258 HOH HOH A . Q 6 HOH 22 259 259 HOH HOH A . Q 6 HOH 23 260 260 HOH HOH A . Q 6 HOH 24 261 1 HOH HOH A . Q 6 HOH 25 262 262 HOH HOH A . Q 6 HOH 26 263 263 HOH HOH A . Q 6 HOH 27 264 264 HOH HOH A . Q 6 HOH 28 265 265 HOH HOH A . Q 6 HOH 29 266 266 HOH HOH A . Q 6 HOH 30 267 2 HOH HOH A . Q 6 HOH 31 268 268 HOH HOH A . Q 6 HOH 32 269 3 HOH HOH A . Q 6 HOH 33 270 270 HOH HOH A . Q 6 HOH 34 271 271 HOH HOH A . Q 6 HOH 35 272 272 HOH HOH A . Q 6 HOH 36 273 273 HOH HOH A . Q 6 HOH 37 274 274 HOH HOH A . Q 6 HOH 38 275 275 HOH HOH A . Q 6 HOH 39 276 276 HOH HOH A . Q 6 HOH 40 277 277 HOH HOH A . Q 6 HOH 41 278 278 HOH HOH A . Q 6 HOH 42 279 279 HOH HOH A . Q 6 HOH 43 280 280 HOH HOH A . Q 6 HOH 44 281 4 HOH HOH A . Q 6 HOH 45 282 282 HOH HOH A . Q 6 HOH 46 283 283 HOH HOH A . Q 6 HOH 47 284 284 HOH HOH A . Q 6 HOH 48 285 285 HOH HOH A . Q 6 HOH 49 286 286 HOH HOH A . Q 6 HOH 50 287 287 HOH HOH A . Q 6 HOH 51 288 5 HOH HOH A . Q 6 HOH 52 289 6 HOH HOH A . Q 6 HOH 53 290 7 HOH HOH A . Q 6 HOH 54 291 16 HOH HOH A . Q 6 HOH 55 292 292 HOH HOH A . Q 6 HOH 56 293 17 HOH HOH A . Q 6 HOH 57 294 294 HOH HOH A . Q 6 HOH 58 295 18 HOH HOH A . Q 6 HOH 59 296 296 HOH HOH A . Q 6 HOH 60 297 297 HOH HOH A . Q 6 HOH 61 298 298 HOH HOH A . Q 6 HOH 62 299 299 HOH HOH A . Q 6 HOH 63 300 19 HOH HOH A . Q 6 HOH 64 301 301 HOH HOH A . Q 6 HOH 65 302 302 HOH HOH A . Q 6 HOH 66 303 20 HOH HOH A . Q 6 HOH 67 304 21 HOH HOH A . Q 6 HOH 68 305 305 HOH HOH A . Q 6 HOH 69 306 306 HOH HOH A . Q 6 HOH 70 307 307 HOH HOH A . Q 6 HOH 71 308 308 HOH HOH A . Q 6 HOH 72 309 22 HOH HOH A . Q 6 HOH 73 310 23 HOH HOH A . Q 6 HOH 74 311 311 HOH HOH A . Q 6 HOH 75 312 312 HOH HOH A . Q 6 HOH 76 313 24 HOH HOH A . Q 6 HOH 77 314 25 HOH HOH A . Q 6 HOH 78 315 26 HOH HOH A . Q 6 HOH 79 316 316 HOH HOH A . Q 6 HOH 80 317 27 HOH HOH A . Q 6 HOH 81 318 318 HOH HOH A . Q 6 HOH 82 319 28 HOH HOH A . Q 6 HOH 83 320 320 HOH HOH A . Q 6 HOH 84 321 321 HOH HOH A . Q 6 HOH 85 322 29 HOH HOH A . Q 6 HOH 86 323 30 HOH HOH A . Q 6 HOH 87 324 31 HOH HOH A . Q 6 HOH 88 325 325 HOH HOH A . Q 6 HOH 89 326 326 HOH HOH A . Q 6 HOH 90 327 327 HOH HOH A . Q 6 HOH 91 328 328 HOH HOH A . Q 6 HOH 92 329 329 HOH HOH A . Q 6 HOH 93 330 330 HOH HOH A . Q 6 HOH 94 331 331 HOH HOH A . Q 6 HOH 95 332 332 HOH HOH A . Q 6 HOH 96 333 32 HOH HOH A . Q 6 HOH 97 334 33 HOH HOH A . Q 6 HOH 98 335 335 HOH HOH A . Q 6 HOH 99 336 34 HOH HOH A . Q 6 HOH 100 337 337 HOH HOH A . Q 6 HOH 101 338 338 HOH HOH A . Q 6 HOH 102 339 339 HOH HOH A . Q 6 HOH 103 340 340 HOH HOH A . Q 6 HOH 104 341 341 HOH HOH A . Q 6 HOH 105 342 342 HOH HOH A . Q 6 HOH 106 343 343 HOH HOH A . Q 6 HOH 107 344 344 HOH HOH A . Q 6 HOH 108 345 345 HOH HOH A . Q 6 HOH 109 346 346 HOH HOH A . Q 6 HOH 110 347 347 HOH HOH A . Q 6 HOH 111 348 348 HOH HOH A . Q 6 HOH 112 349 349 HOH HOH A . Q 6 HOH 113 350 350 HOH HOH A . Q 6 HOH 114 351 351 HOH HOH A . Q 6 HOH 115 352 352 HOH HOH A . Q 6 HOH 116 353 353 HOH HOH A . Q 6 HOH 117 354 354 HOH HOH A . Q 6 HOH 118 355 355 HOH HOH A . Q 6 HOH 119 356 356 HOH HOH A . Q 6 HOH 120 357 357 HOH HOH A . Q 6 HOH 121 358 358 HOH HOH A . Q 6 HOH 122 359 37 HOH HOH A . Q 6 HOH 123 360 360 HOH HOH A . Q 6 HOH 124 361 361 HOH HOH A . Q 6 HOH 125 362 362 HOH HOH A . Q 6 HOH 126 363 38 HOH HOH A . Q 6 HOH 127 364 39 HOH HOH A . Q 6 HOH 128 365 40 HOH HOH A . Q 6 HOH 129 366 41 HOH HOH A . Q 6 HOH 130 367 42 HOH HOH A . Q 6 HOH 131 368 43 HOH HOH A . Q 6 HOH 132 369 44 HOH HOH A . Q 6 HOH 133 370 45 HOH HOH A . Q 6 HOH 134 371 46 HOH HOH A . Q 6 HOH 135 372 47 HOH HOH A . Q 6 HOH 136 373 48 HOH HOH A . Q 6 HOH 137 374 49 HOH HOH A . Q 6 HOH 138 375 50 HOH HOH A . Q 6 HOH 139 376 51 HOH HOH A . Q 6 HOH 140 377 52 HOH HOH A . Q 6 HOH 141 378 53 HOH HOH A . Q 6 HOH 142 379 54 HOH HOH A . Q 6 HOH 143 380 55 HOH HOH A . Q 6 HOH 144 381 56 HOH HOH A . Q 6 HOH 145 382 57 HOH HOH A . Q 6 HOH 146 383 58 HOH HOH A . Q 6 HOH 147 384 59 HOH HOH A . Q 6 HOH 148 385 60 HOH HOH A . Q 6 HOH 149 386 61 HOH HOH A . Q 6 HOH 150 387 62 HOH HOH A . Q 6 HOH 151 388 63 HOH HOH A . Q 6 HOH 152 389 64 HOH HOH A . Q 6 HOH 153 390 65 HOH HOH A . Q 6 HOH 154 391 66 HOH HOH A . Q 6 HOH 155 392 67 HOH HOH A . Q 6 HOH 156 393 69 HOH HOH A . Q 6 HOH 157 394 70 HOH HOH A . Q 6 HOH 158 395 71 HOH HOH A . Q 6 HOH 159 396 72 HOH HOH A . Q 6 HOH 160 397 73 HOH HOH A . Q 6 HOH 161 398 74 HOH HOH A . Q 6 HOH 162 399 75 HOH HOH A . Q 6 HOH 163 400 76 HOH HOH A . Q 6 HOH 164 401 77 HOH HOH A . Q 6 HOH 165 402 78 HOH HOH A . Q 6 HOH 166 403 79 HOH HOH A . Q 6 HOH 167 404 80 HOH HOH A . Q 6 HOH 168 405 81 HOH HOH A . Q 6 HOH 169 406 82 HOH HOH A . Q 6 HOH 170 407 83 HOH HOH A . Q 6 HOH 171 408 84 HOH HOH A . Q 6 HOH 172 409 85 HOH HOH A . Q 6 HOH 173 410 86 HOH HOH A . Q 6 HOH 174 411 87 HOH HOH A . Q 6 HOH 175 412 88 HOH HOH A . Q 6 HOH 176 413 89 HOH HOH A . Q 6 HOH 177 414 90 HOH HOH A . Q 6 HOH 178 415 91 HOH HOH A . Q 6 HOH 179 416 92 HOH HOH A . Q 6 HOH 180 417 93 HOH HOH A . Q 6 HOH 181 418 94 HOH HOH A . Q 6 HOH 182 419 95 HOH HOH A . Q 6 HOH 183 420 96 HOH HOH A . Q 6 HOH 184 421 97 HOH HOH A . Q 6 HOH 185 422 98 HOH HOH A . Q 6 HOH 186 423 99 HOH HOH A . Q 6 HOH 187 424 100 HOH HOH A . Q 6 HOH 188 425 101 HOH HOH A . Q 6 HOH 189 426 102 HOH HOH A . Q 6 HOH 190 427 103 HOH HOH A . Q 6 HOH 191 428 104 HOH HOH A . Q 6 HOH 192 429 105 HOH HOH A . Q 6 HOH 193 430 106 HOH HOH A . Q 6 HOH 194 431 107 HOH HOH A . Q 6 HOH 195 432 108 HOH HOH A . Q 6 HOH 196 433 109 HOH HOH A . Q 6 HOH 197 434 110 HOH HOH A . Q 6 HOH 198 435 111 HOH HOH A . Q 6 HOH 199 436 112 HOH HOH A . Q 6 HOH 200 437 113 HOH HOH A . Q 6 HOH 201 438 114 HOH HOH A . Q 6 HOH 202 439 115 HOH HOH A . Q 6 HOH 203 440 116 HOH HOH A . Q 6 HOH 204 441 117 HOH HOH A . Q 6 HOH 205 442 118 HOH HOH A . Q 6 HOH 206 443 119 HOH HOH A . Q 6 HOH 207 444 120 HOH HOH A . Q 6 HOH 208 445 121 HOH HOH A . Q 6 HOH 209 446 122 HOH HOH A . Q 6 HOH 210 447 123 HOH HOH A . Q 6 HOH 211 448 124 HOH HOH A . Q 6 HOH 212 449 125 HOH HOH A . Q 6 HOH 213 450 127 HOH HOH A . Q 6 HOH 214 451 128 HOH HOH A . Q 6 HOH 215 452 129 HOH HOH A . Q 6 HOH 216 453 130 HOH HOH A . Q 6 HOH 217 454 132 HOH HOH A . Q 6 HOH 218 455 133 HOH HOH A . Q 6 HOH 219 456 134 HOH HOH A . Q 6 HOH 220 457 135 HOH HOH A . Q 6 HOH 221 458 136 HOH HOH A . Q 6 HOH 222 459 137 HOH HOH A . Q 6 HOH 223 460 138 HOH HOH A . Q 6 HOH 224 461 139 HOH HOH A . Q 6 HOH 225 462 140 HOH HOH A . Q 6 HOH 226 463 141 HOH HOH A . Q 6 HOH 227 464 142 HOH HOH A . Q 6 HOH 228 465 143 HOH HOH A . Q 6 HOH 229 466 144 HOH HOH A . Q 6 HOH 230 467 145 HOH HOH A . Q 6 HOH 231 468 146 HOH HOH A . Q 6 HOH 232 469 147 HOH HOH A . Q 6 HOH 233 470 148 HOH HOH A . Q 6 HOH 234 471 149 HOH HOH A . Q 6 HOH 235 472 150 HOH HOH A . Q 6 HOH 236 473 151 HOH HOH A . Q 6 HOH 237 474 152 HOH HOH A . Q 6 HOH 238 475 154 HOH HOH A . Q 6 HOH 239 476 155 HOH HOH A . Q 6 HOH 240 477 156 HOH HOH A . Q 6 HOH 241 478 157 HOH HOH A . Q 6 HOH 242 479 158 HOH HOH A . Q 6 HOH 243 480 159 HOH HOH A . Q 6 HOH 244 481 160 HOH HOH A . Q 6 HOH 245 482 161 HOH HOH A . Q 6 HOH 246 483 162 HOH HOH A . Q 6 HOH 247 484 163 HOH HOH A . Q 6 HOH 248 485 164 HOH HOH A . Q 6 HOH 249 486 165 HOH HOH A . Q 6 HOH 250 487 166 HOH HOH A . Q 6 HOH 251 488 167 HOH HOH A . Q 6 HOH 252 489 168 HOH HOH A . Q 6 HOH 253 490 169 HOH HOH A . Q 6 HOH 254 491 170 HOH HOH A . Q 6 HOH 255 492 171 HOH HOH A . Q 6 HOH 256 493 172 HOH HOH A . Q 6 HOH 257 494 173 HOH HOH A . Q 6 HOH 258 495 174 HOH HOH A . Q 6 HOH 259 496 175 HOH HOH A . Q 6 HOH 260 497 176 HOH HOH A . Q 6 HOH 261 498 177 HOH HOH A . Q 6 HOH 262 499 178 HOH HOH A . Q 6 HOH 263 500 179 HOH HOH A . Q 6 HOH 264 501 180 HOH HOH A . Q 6 HOH 265 502 181 HOH HOH A . Q 6 HOH 266 503 182 HOH HOH A . Q 6 HOH 267 504 184 HOH HOH A . Q 6 HOH 268 505 185 HOH HOH A . Q 6 HOH 269 506 186 HOH HOH A . Q 6 HOH 270 507 187 HOH HOH A . Q 6 HOH 271 508 188 HOH HOH A . Q 6 HOH 272 509 189 HOH HOH A . Q 6 HOH 273 510 190 HOH HOH A . Q 6 HOH 274 511 191 HOH HOH A . Q 6 HOH 275 512 192 HOH HOH A . Q 6 HOH 276 513 193 HOH HOH A . Q 6 HOH 277 514 194 HOH HOH A . Q 6 HOH 278 515 195 HOH HOH A . Q 6 HOH 279 516 196 HOH HOH A . Q 6 HOH 280 517 197 HOH HOH A . Q 6 HOH 281 518 198 HOH HOH A . Q 6 HOH 282 519 200 HOH HOH A . Q 6 HOH 283 520 201 HOH HOH A . Q 6 HOH 284 521 202 HOH HOH A . Q 6 HOH 285 522 203 HOH HOH A . Q 6 HOH 286 523 204 HOH HOH A . Q 6 HOH 287 524 209 HOH HOH A . Q 6 HOH 288 525 210 HOH HOH A . Q 6 HOH 289 526 211 HOH HOH A . Q 6 HOH 290 527 212 HOH HOH A . Q 6 HOH 291 528 213 HOH HOH A . Q 6 HOH 292 529 214 HOH HOH A . Q 6 HOH 293 530 215 HOH HOH A . Q 6 HOH 294 531 216 HOH HOH A . Q 6 HOH 295 532 217 HOH HOH A . Q 6 HOH 296 533 219 HOH HOH A . Q 6 HOH 297 534 220 HOH HOH A . Q 6 HOH 298 535 221 HOH HOH A . Q 6 HOH 299 536 222 HOH HOH A . Q 6 HOH 300 537 223 HOH HOH A . Q 6 HOH 301 538 224 HOH HOH A . Q 6 HOH 302 539 225 HOH HOH A . Q 6 HOH 303 540 226 HOH HOH A . Q 6 HOH 304 541 227 HOH HOH A . Q 6 HOH 305 542 228 HOH HOH A . Q 6 HOH 306 543 229 HOH HOH A . Q 6 HOH 307 544 230 HOH HOH A . Q 6 HOH 308 545 231 HOH HOH A . Q 6 HOH 309 546 232 HOH HOH A . Q 6 HOH 310 547 233 HOH HOH A . Q 6 HOH 311 548 234 HOH HOH A . Q 6 HOH 312 549 235 HOH HOH A . Q 6 HOH 313 550 236 HOH HOH A . Q 6 HOH 314 551 237 HOH HOH A . Q 6 HOH 315 552 238 HOH HOH A . Q 6 HOH 316 553 239 HOH HOH A . Q 6 HOH 317 554 240 HOH HOH A . Q 6 HOH 318 555 241 HOH HOH A . Q 6 HOH 319 556 242 HOH HOH A . Q 6 HOH 320 557 243 HOH HOH A . Q 6 HOH 321 558 244 HOH HOH A . Q 6 HOH 322 559 245 HOH HOH A . Q 6 HOH 323 560 246 HOH HOH A . Q 6 HOH 324 561 247 HOH HOH A . Q 6 HOH 325 562 248 HOH HOH A . Q 6 HOH 326 563 249 HOH HOH A . Q 6 HOH 327 564 250 HOH HOH A . Q 6 HOH 328 565 251 HOH HOH A . Q 6 HOH 329 566 252 HOH HOH A . Q 6 HOH 330 567 253 HOH HOH A . #