data_3H25 # _entry.id 3H25 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3H25 pdb_00003h25 10.2210/pdb3h25/pdb NDB PD1279 ? ? RCSB RCSB052596 ? ? WWPDB D_1000052596 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3H20 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3H25 _pdbx_database_status.recvd_initial_deposition_date 2009-04-14 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Geibel, S.' 1 'Banchenko, S.' 2 'Engel, M.' 3 'Lanka, E.' 4 'Saenger, W.' 5 # _citation.id primary _citation.title ;Structure and function of primase RepB' encoded by broad-host-range plasmid RSF1010 that replicates exclusively in leading-strand mode ; _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 106 _citation.page_first 7810 _citation.page_last 7815 _citation.year 2009 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19416864 _citation.pdbx_database_id_DOI 10.1073/pnas.0902910106 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Geibel, S.' 1 ? primary 'Banchenko, S.' 2 ? primary 'Engel, M.' 3 ? primary 'Lanka, E.' 4 ? primary 'Saenger, W.' 5 ? # _cell.entry_id 3H25 _cell.length_a 85.350 _cell.length_b 85.350 _cell.length_c 68.890 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3H25 _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Replication protein B' 25125.143 1 ? ? 'N-TERMINAL DOMAIN, UNP RESIDUES 1-212' ? 2 polymer syn 'SINGLE STRANDED INITIATOR DNA (SSIA)' 8270.298 1 ? ? 'SINGLE STRANDED INITIATOR DNA, GB 2701-2727' ? 3 water nat water 18.015 24 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MGSSHSSGLVPRGSMKNDRTLQAIGRQLKAMGCERFDIGVRDATTGQMMNREWSAAEVLQNTPWLKRMNAQGNDVYIRPA EQERHGLVLVDDLSEFDLDDMKAEGREPALVVETSPKNYQAWVKVADAAGGELRGQIARTLASEYDADPASADSRHYGRL AGFTNRKDKHTTRAGYQPWVLLRESKGKTATAGPALVQQAGQQIEQAQRQQEKARRLASLELPERQ ; ;MGSSHSSGLVPRGSMKNDRTLQAIGRQLKAMGCERFDIGVRDATTGQMMNREWSAAEVLQNTPWLKRMNAQGNDVYIRPA EQERHGLVLVDDLSEFDLDDMKAEGREPALVVETSPKNYQAWVKVADAAGGELRGQIARTLASEYDADPASADSRHYGRL AGFTNRKDKHTTRAGYQPWVLLRESKGKTATAGPALVQQAGQQIEQAQRQQEKARRLASLELPERQ ; A ? 2 polydeoxyribonucleotide no no ;(DC)(DC)(DT)(DT)(DT)(DC)(DC)(DC)(DC)(DC)(DT)(DA)(DC)(DC)(DC)(DG)(DA)(DA)(DG)(DG) (DG)(DT)(DG)(DG)(DG)(DG)(DG) ; CCTTTCCCCCTACCCGAAGGGTGGGGG C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 SER n 1 7 SER n 1 8 GLY n 1 9 LEU n 1 10 VAL n 1 11 PRO n 1 12 ARG n 1 13 GLY n 1 14 SER n 1 15 MET n 1 16 LYS n 1 17 ASN n 1 18 ASP n 1 19 ARG n 1 20 THR n 1 21 LEU n 1 22 GLN n 1 23 ALA n 1 24 ILE n 1 25 GLY n 1 26 ARG n 1 27 GLN n 1 28 LEU n 1 29 LYS n 1 30 ALA n 1 31 MET n 1 32 GLY n 1 33 CYS n 1 34 GLU n 1 35 ARG n 1 36 PHE n 1 37 ASP n 1 38 ILE n 1 39 GLY n 1 40 VAL n 1 41 ARG n 1 42 ASP n 1 43 ALA n 1 44 THR n 1 45 THR n 1 46 GLY n 1 47 GLN n 1 48 MET n 1 49 MET n 1 50 ASN n 1 51 ARG n 1 52 GLU n 1 53 TRP n 1 54 SER n 1 55 ALA n 1 56 ALA n 1 57 GLU n 1 58 VAL n 1 59 LEU n 1 60 GLN n 1 61 ASN n 1 62 THR n 1 63 PRO n 1 64 TRP n 1 65 LEU n 1 66 LYS n 1 67 ARG n 1 68 MET n 1 69 ASN n 1 70 ALA n 1 71 GLN n 1 72 GLY n 1 73 ASN n 1 74 ASP n 1 75 VAL n 1 76 TYR n 1 77 ILE n 1 78 ARG n 1 79 PRO n 1 80 ALA n 1 81 GLU n 1 82 GLN n 1 83 GLU n 1 84 ARG n 1 85 HIS n 1 86 GLY n 1 87 LEU n 1 88 VAL n 1 89 LEU n 1 90 VAL n 1 91 ASP n 1 92 ASP n 1 93 LEU n 1 94 SER n 1 95 GLU n 1 96 PHE n 1 97 ASP n 1 98 LEU n 1 99 ASP n 1 100 ASP n 1 101 MET n 1 102 LYS n 1 103 ALA n 1 104 GLU n 1 105 GLY n 1 106 ARG n 1 107 GLU n 1 108 PRO n 1 109 ALA n 1 110 LEU n 1 111 VAL n 1 112 VAL n 1 113 GLU n 1 114 THR n 1 115 SER n 1 116 PRO n 1 117 LYS n 1 118 ASN n 1 119 TYR n 1 120 GLN n 1 121 ALA n 1 122 TRP n 1 123 VAL n 1 124 LYS n 1 125 VAL n 1 126 ALA n 1 127 ASP n 1 128 ALA n 1 129 ALA n 1 130 GLY n 1 131 GLY n 1 132 GLU n 1 133 LEU n 1 134 ARG n 1 135 GLY n 1 136 GLN n 1 137 ILE n 1 138 ALA n 1 139 ARG n 1 140 THR n 1 141 LEU n 1 142 ALA n 1 143 SER n 1 144 GLU n 1 145 TYR n 1 146 ASP n 1 147 ALA n 1 148 ASP n 1 149 PRO n 1 150 ALA n 1 151 SER n 1 152 ALA n 1 153 ASP n 1 154 SER n 1 155 ARG n 1 156 HIS n 1 157 TYR n 1 158 GLY n 1 159 ARG n 1 160 LEU n 1 161 ALA n 1 162 GLY n 1 163 PHE n 1 164 THR n 1 165 ASN n 1 166 ARG n 1 167 LYS n 1 168 ASP n 1 169 LYS n 1 170 HIS n 1 171 THR n 1 172 THR n 1 173 ARG n 1 174 ALA n 1 175 GLY n 1 176 TYR n 1 177 GLN n 1 178 PRO n 1 179 TRP n 1 180 VAL n 1 181 LEU n 1 182 LEU n 1 183 ARG n 1 184 GLU n 1 185 SER n 1 186 LYS n 1 187 GLY n 1 188 LYS n 1 189 THR n 1 190 ALA n 1 191 THR n 1 192 ALA n 1 193 GLY n 1 194 PRO n 1 195 ALA n 1 196 LEU n 1 197 VAL n 1 198 GLN n 1 199 GLN n 1 200 ALA n 1 201 GLY n 1 202 GLN n 1 203 GLN n 1 204 ILE n 1 205 GLU n 1 206 GLN n 1 207 ALA n 1 208 GLN n 1 209 ARG n 1 210 GLN n 1 211 GLN n 1 212 GLU n 1 213 LYS n 1 214 ALA n 1 215 ARG n 1 216 ARG n 1 217 LEU n 1 218 ALA n 1 219 SER n 1 220 LEU n 1 221 GLU n 1 222 LEU n 1 223 PRO n 1 224 GLU n 1 225 ARG n 1 226 GLN n 2 1 DC n 2 2 DC n 2 3 DT n 2 4 DT n 2 5 DT n 2 6 DC n 2 7 DC n 2 8 DC n 2 9 DC n 2 10 DC n 2 11 DT n 2 12 DA n 2 13 DC n 2 14 DC n 2 15 DC n 2 16 DG n 2 17 DA n 2 18 DA n 2 19 DG n 2 20 DG n 2 21 DG n 2 22 DT n 2 23 DG n 2 24 DG n 2 25 DG n 2 26 DG n 2 27 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene repb _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Plasmid RSF1010' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2504 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ER2566 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'Synthetic DNA' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q52349_9ZZZZ Q52349 1 ;MKNDRTLQAIGRQLKAMGCERFDIGVRDATTGQMMNREWSAAEVLQNTPWLKRMNAQGNDVYIRPAEQERHGLVLVDDLS EFDLDDMKAEGREPALVVETSPKNYQAWVKVADAAGGELRGQIARTLASEYDADPASADSRHYGRLAGFTNRKDKHTTRA GYQPWVLLRESKGKTATAGPALVQQAGQQIEQAQRQQEKARRLASLELPERQ ; 1 ? 2 GB M28829 152577 2 CCTTTCCCCCTACCCGAAGGGTGGGGG 2701 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3H25 A 15 ? 226 ? Q52349 1 ? 212 ? 1 212 2 2 3H25 C 1 ? 27 ? 152577 2701 ? 2727 ? 1 27 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3H25 MET A 1 ? UNP Q52349 ? ? 'expression tag' -13 1 1 3H25 GLY A 2 ? UNP Q52349 ? ? 'expression tag' -12 2 1 3H25 SER A 3 ? UNP Q52349 ? ? 'expression tag' -11 3 1 3H25 SER A 4 ? UNP Q52349 ? ? 'expression tag' -10 4 1 3H25 HIS A 5 ? UNP Q52349 ? ? 'expression tag' -9 5 1 3H25 SER A 6 ? UNP Q52349 ? ? 'expression tag' -8 6 1 3H25 SER A 7 ? UNP Q52349 ? ? 'expression tag' -7 7 1 3H25 GLY A 8 ? UNP Q52349 ? ? 'expression tag' -6 8 1 3H25 LEU A 9 ? UNP Q52349 ? ? 'expression tag' -5 9 1 3H25 VAL A 10 ? UNP Q52349 ? ? 'expression tag' -4 10 1 3H25 PRO A 11 ? UNP Q52349 ? ? 'expression tag' -3 11 1 3H25 ARG A 12 ? UNP Q52349 ? ? 'expression tag' -2 12 1 3H25 GLY A 13 ? UNP Q52349 ? ? 'expression tag' -1 13 1 3H25 SER A 14 ? UNP Q52349 ? ? 'expression tag' 0 14 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3H25 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.88 _exptl_crystal.density_percent_sol 34.52 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5 _exptl_crystal_grow.pdbx_details '0.2M AMMONIUM CITRATE, 20% PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2007-12-05 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'DOUBLE CRYSTAL MONOCHROMATOR: SI-111 CRYSTAL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.91841 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'BESSY BEAMLINE 14.2' _diffrn_source.pdbx_synchrotron_site BESSY _diffrn_source.pdbx_synchrotron_beamline 14.2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.91841 # _reflns.entry_id 3H25 _reflns.observed_criterion_sigma_I 2.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 19.000 _reflns.d_resolution_high 2.700 _reflns.number_obs 7215 _reflns.number_all 7400 _reflns.percent_possible_obs 97.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.11100 _reflns.pdbx_netI_over_sigmaI 16.5100 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.200 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.70 _reflns_shell.d_res_low 2.77 _reflns_shell.percent_possible_all 95.0 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.39400 _reflns_shell.meanI_over_sigI_obs 5.640 _reflns_shell.pdbx_redundancy 7.30 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3H25 _refine.ls_number_reflns_obs 6997 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.00 _refine.ls_d_res_high 2.70 _refine.ls_percent_reflns_obs 100.0 _refine.ls_R_factor_obs 0.226 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.224 _refine.ls_R_factor_R_free 0.274 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 368 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.908 _refine.correlation_coeff_Fo_to_Fc_free 0.863 _refine.B_iso_mean 31.47 _refine.aniso_B[1][1] 0.36000 _refine.aniso_B[2][2] 0.36000 _refine.aniso_B[3][3] -0.72000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'CATALYTIC DOMAIN OF PDB 3H20, MODEL OF IDEAL B-DNA' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.401 _refine.overall_SU_ML 0.285 _refine.overall_SU_B 30.309 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1417 _refine_hist.pdbx_number_atoms_nucleic_acid 546 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 24 _refine_hist.number_atoms_total 1987 _refine_hist.d_res_high 2.70 _refine_hist.d_res_low 19.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.005 0.021 ? 2049 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 0.947 2.290 ? 2887 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.605 5.000 ? 186 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 36.977 24.857 ? 70 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.163 15.000 ? 236 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 15.321 15.000 ? 13 'X-RAY DIFFRACTION' ? r_chiral_restr 0.051 0.200 ? 318 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.002 0.020 ? 1395 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.158 0.200 ? 768 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.280 0.200 ? 1334 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.106 0.200 ? 71 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.125 0.200 ? 42 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.068 0.200 ? 9 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.198 1.500 ? 954 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.353 2.000 ? 1466 'X-RAY DIFFRACTION' ? r_scbond_it 0.333 3.000 ? 1438 'X-RAY DIFFRACTION' ? r_scangle_it 0.658 4.500 ? 1421 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.70 _refine_ls_shell.d_res_low 2.77 _refine_ls_shell.number_reflns_R_work 497 _refine_ls_shell.R_factor_R_work 0.2800 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.3240 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 26 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3H25 _struct.title ;Crystal structure of the catalytic domain of primase Repb' in complex with initiator DNA ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3H25 _struct_keywords.pdbx_keywords REPLICATION/DNA _struct_keywords.text 'PROTEIN-DNA-COMPLEX, HAIRPIN DNA, MIXED ALPHA-BETA FOLD, PRIMASE, RSF1010, REPLICATION, REPLICATION-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 18 ? GLY A 32 ? ASP A 4 GLY A 18 1 ? 15 HELX_P HELX_P2 2 ALA A 55 ? ASN A 61 ? ALA A 41 ASN A 47 1 ? 7 HELX_P HELX_P3 3 ASN A 61 ? GLN A 71 ? ASN A 47 GLN A 57 1 ? 11 HELX_P HELX_P4 4 SER A 94 ? GLU A 104 ? SER A 80 GLU A 90 1 ? 11 HELX_P HELX_P5 5 GLY A 130 ? TYR A 145 ? GLY A 116 TYR A 131 1 ? 16 HELX_P HELX_P6 6 ASP A 148 ? ALA A 152 ? ASP A 134 ALA A 138 5 ? 5 HELX_P HELX_P7 7 ALA A 192 ? GLN A 210 ? ALA A 178 GLN A 196 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? B DC 7 N4 ? ? ? 1_555 B DG 26 O6 ? ? C DC 7 C DG 26 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog2 hydrog ? ? B DC 7 N3 ? ? ? 1_555 B DG 27 N1 ? ? C DC 7 C DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DC 7 N4 ? ? ? 1_555 B DG 27 O6 ? ? C DC 7 C DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DC 7 O2 ? ? ? 1_555 B DG 27 N2 ? ? C DC 7 C DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DC 8 N3 ? ? ? 1_555 B DG 26 N1 ? ? C DC 8 C DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 8 N4 ? ? ? 1_555 B DG 26 O6 ? ? C DC 8 C DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DC 8 O2 ? ? ? 1_555 B DG 26 N2 ? ? C DC 8 C DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DC 9 N3 ? ? ? 1_555 B DG 25 N1 ? ? C DC 9 C DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DC 9 N4 ? ? ? 1_555 B DG 25 O6 ? ? C DC 9 C DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DC 9 O2 ? ? ? 1_555 B DG 25 N2 ? ? C DC 9 C DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DC 10 N3 ? ? ? 1_555 B DG 24 N1 ? ? C DC 10 C DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 10 N4 ? ? ? 1_555 B DG 24 O6 ? ? C DC 10 C DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DC 10 O2 ? ? ? 1_555 B DG 24 N2 ? ? C DC 10 C DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DT 11 N3 ? ? ? 1_555 B DG 23 O6 ? ? C DT 11 C DG 23 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog15 hydrog ? ? B DT 11 O2 ? ? ? 1_555 B DG 23 N1 ? ? C DT 11 C DG 23 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog16 hydrog ? ? B DA 12 N1 ? ? ? 1_555 B DT 22 N3 ? ? C DA 12 C DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DA 12 N6 ? ? ? 1_555 B DT 22 O4 ? ? C DA 12 C DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DC 13 N3 ? ? ? 1_555 B DG 21 N1 ? ? C DC 13 C DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DC 13 N4 ? ? ? 1_555 B DG 21 O6 ? ? C DC 13 C DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DC 13 O2 ? ? ? 1_555 B DG 21 N2 ? ? C DC 13 C DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DC 14 N3 ? ? ? 1_555 B DG 20 N1 ? ? C DC 14 C DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DC 14 N4 ? ? ? 1_555 B DG 20 O6 ? ? C DC 14 C DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DC 14 O2 ? ? ? 1_555 B DG 20 N2 ? ? C DC 14 C DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DC 15 N3 ? ? ? 1_555 B DG 19 N1 ? ? C DC 15 C DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DC 15 N4 ? ? ? 1_555 B DG 19 O6 ? ? C DC 15 C DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DC 15 O2 ? ? ? 1_555 B DG 19 N2 ? ? C DC 15 C DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASP _struct_mon_prot_cis.label_seq_id 168 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASP _struct_mon_prot_cis.auth_seq_id 154 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 LYS _struct_mon_prot_cis.pdbx_label_seq_id_2 169 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 LYS _struct_mon_prot_cis.pdbx_auth_seq_id_2 155 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 2.93 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 MET A 48 ? SER A 54 ? MET A 34 SER A 40 A 2 ARG A 35 ? ASP A 42 ? ARG A 21 ASP A 28 A 3 ASN A 73 ? PRO A 79 ? ASN A 59 PRO A 65 A 4 GLY A 158 ? ARG A 159 ? GLY A 144 ARG A 145 B 1 LEU A 87 ? LEU A 93 ? LEU A 73 LEU A 79 B 2 ASN A 118 ? LYS A 124 ? ASN A 104 LYS A 110 B 3 LEU A 110 ? SER A 115 ? LEU A 96 SER A 101 B 4 LEU A 181 ? GLU A 184 ? LEU A 167 GLU A 170 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O TRP A 53 ? O TRP A 39 N PHE A 36 ? N PHE A 22 A 2 3 N GLY A 39 ? N GLY A 25 O TYR A 76 ? O TYR A 62 A 3 4 N ILE A 77 ? N ILE A 63 O GLY A 158 ? O GLY A 144 B 1 2 N VAL A 88 ? N VAL A 74 O VAL A 123 ? O VAL A 109 B 2 3 O ASN A 118 ? O ASN A 104 N SER A 115 ? N SER A 101 B 3 4 N GLU A 113 ? N GLU A 99 O LEU A 181 ? O LEU A 167 # _database_PDB_matrix.entry_id 3H25 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3H25 _atom_sites.fract_transf_matrix[1][1] 0.011716 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011716 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014516 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -13 ? ? ? A . n A 1 2 GLY 2 -12 ? ? ? A . n A 1 3 SER 3 -11 ? ? ? A . n A 1 4 SER 4 -10 ? ? ? A . n A 1 5 HIS 5 -9 ? ? ? A . n A 1 6 SER 6 -8 ? ? ? A . n A 1 7 SER 7 -7 ? ? ? A . n A 1 8 GLY 8 -6 ? ? ? A . n A 1 9 LEU 9 -5 ? ? ? A . n A 1 10 VAL 10 -4 ? ? ? A . n A 1 11 PRO 11 -3 ? ? ? A . n A 1 12 ARG 12 -2 ? ? ? A . n A 1 13 GLY 13 -1 ? ? ? A . n A 1 14 SER 14 0 ? ? ? A . n A 1 15 MET 15 1 ? ? ? A . n A 1 16 LYS 16 2 ? ? ? A . n A 1 17 ASN 17 3 ? ? ? A . n A 1 18 ASP 18 4 4 ASP ASP A . n A 1 19 ARG 19 5 5 ARG ARG A . n A 1 20 THR 20 6 6 THR THR A . n A 1 21 LEU 21 7 7 LEU LEU A . n A 1 22 GLN 22 8 8 GLN GLN A . n A 1 23 ALA 23 9 9 ALA ALA A . n A 1 24 ILE 24 10 10 ILE ILE A . n A 1 25 GLY 25 11 11 GLY GLY A . n A 1 26 ARG 26 12 12 ARG ARG A . n A 1 27 GLN 27 13 13 GLN GLN A . n A 1 28 LEU 28 14 14 LEU LEU A . n A 1 29 LYS 29 15 15 LYS LYS A . n A 1 30 ALA 30 16 16 ALA ALA A . n A 1 31 MET 31 17 17 MET MET A . n A 1 32 GLY 32 18 18 GLY GLY A . n A 1 33 CYS 33 19 19 CYS CYS A . n A 1 34 GLU 34 20 20 GLU GLU A . n A 1 35 ARG 35 21 21 ARG ARG A . n A 1 36 PHE 36 22 22 PHE PHE A . n A 1 37 ASP 37 23 23 ASP ASP A . n A 1 38 ILE 38 24 24 ILE ILE A . n A 1 39 GLY 39 25 25 GLY GLY A . n A 1 40 VAL 40 26 26 VAL VAL A . n A 1 41 ARG 41 27 27 ARG ARG A . n A 1 42 ASP 42 28 28 ASP ASP A . n A 1 43 ALA 43 29 29 ALA ALA A . n A 1 44 THR 44 30 30 THR THR A . n A 1 45 THR 45 31 31 THR THR A . n A 1 46 GLY 46 32 32 GLY GLY A . n A 1 47 GLN 47 33 33 GLN GLN A . n A 1 48 MET 48 34 34 MET MET A . n A 1 49 MET 49 35 35 MET MET A . n A 1 50 ASN 50 36 36 ASN ASN A . n A 1 51 ARG 51 37 37 ARG ARG A . n A 1 52 GLU 52 38 38 GLU GLU A . n A 1 53 TRP 53 39 39 TRP TRP A . n A 1 54 SER 54 40 40 SER SER A . n A 1 55 ALA 55 41 41 ALA ALA A . n A 1 56 ALA 56 42 42 ALA ALA A . n A 1 57 GLU 57 43 43 GLU GLU A . n A 1 58 VAL 58 44 44 VAL VAL A . n A 1 59 LEU 59 45 45 LEU LEU A . n A 1 60 GLN 60 46 46 GLN GLN A . n A 1 61 ASN 61 47 47 ASN ASN A . n A 1 62 THR 62 48 48 THR THR A . n A 1 63 PRO 63 49 49 PRO PRO A . n A 1 64 TRP 64 50 50 TRP TRP A . n A 1 65 LEU 65 51 51 LEU LEU A . n A 1 66 LYS 66 52 52 LYS LYS A . n A 1 67 ARG 67 53 53 ARG ARG A . n A 1 68 MET 68 54 54 MET MET A . n A 1 69 ASN 69 55 55 ASN ASN A . n A 1 70 ALA 70 56 56 ALA ALA A . n A 1 71 GLN 71 57 57 GLN GLN A . n A 1 72 GLY 72 58 58 GLY GLY A . n A 1 73 ASN 73 59 59 ASN ASN A . n A 1 74 ASP 74 60 60 ASP ASP A . n A 1 75 VAL 75 61 61 VAL VAL A . n A 1 76 TYR 76 62 62 TYR TYR A . n A 1 77 ILE 77 63 63 ILE ILE A . n A 1 78 ARG 78 64 64 ARG ARG A . n A 1 79 PRO 79 65 65 PRO PRO A . n A 1 80 ALA 80 66 66 ALA ALA A . n A 1 81 GLU 81 67 67 GLU GLU A . n A 1 82 GLN 82 68 68 GLN GLN A . n A 1 83 GLU 83 69 69 GLU GLU A . n A 1 84 ARG 84 70 70 ARG ARG A . n A 1 85 HIS 85 71 71 HIS HIS A . n A 1 86 GLY 86 72 72 GLY GLY A . n A 1 87 LEU 87 73 73 LEU LEU A . n A 1 88 VAL 88 74 74 VAL VAL A . n A 1 89 LEU 89 75 75 LEU LEU A . n A 1 90 VAL 90 76 76 VAL VAL A . n A 1 91 ASP 91 77 77 ASP ASP A . n A 1 92 ASP 92 78 78 ASP ASP A . n A 1 93 LEU 93 79 79 LEU LEU A . n A 1 94 SER 94 80 80 SER SER A . n A 1 95 GLU 95 81 81 GLU GLU A . n A 1 96 PHE 96 82 82 PHE PHE A . n A 1 97 ASP 97 83 83 ASP ASP A . n A 1 98 LEU 98 84 84 LEU LEU A . n A 1 99 ASP 99 85 85 ASP ASP A . n A 1 100 ASP 100 86 86 ASP ASP A . n A 1 101 MET 101 87 87 MET MET A . n A 1 102 LYS 102 88 88 LYS LYS A . n A 1 103 ALA 103 89 89 ALA ALA A . n A 1 104 GLU 104 90 90 GLU GLU A . n A 1 105 GLY 105 91 91 GLY GLY A . n A 1 106 ARG 106 92 92 ARG ARG A . n A 1 107 GLU 107 93 93 GLU GLU A . n A 1 108 PRO 108 94 94 PRO PRO A . n A 1 109 ALA 109 95 95 ALA ALA A . n A 1 110 LEU 110 96 96 LEU LEU A . n A 1 111 VAL 111 97 97 VAL VAL A . n A 1 112 VAL 112 98 98 VAL VAL A . n A 1 113 GLU 113 99 99 GLU GLU A . n A 1 114 THR 114 100 100 THR THR A . n A 1 115 SER 115 101 101 SER SER A . n A 1 116 PRO 116 102 102 PRO PRO A . n A 1 117 LYS 117 103 103 LYS LYS A . n A 1 118 ASN 118 104 104 ASN ASN A . n A 1 119 TYR 119 105 105 TYR TYR A . n A 1 120 GLN 120 106 106 GLN GLN A . n A 1 121 ALA 121 107 107 ALA ALA A . n A 1 122 TRP 122 108 108 TRP TRP A . n A 1 123 VAL 123 109 109 VAL VAL A . n A 1 124 LYS 124 110 110 LYS LYS A . n A 1 125 VAL 125 111 111 VAL VAL A . n A 1 126 ALA 126 112 112 ALA ALA A . n A 1 127 ASP 127 113 113 ASP ASP A . n A 1 128 ALA 128 114 114 ALA ALA A . n A 1 129 ALA 129 115 115 ALA ALA A . n A 1 130 GLY 130 116 116 GLY GLY A . n A 1 131 GLY 131 117 117 GLY GLY A . n A 1 132 GLU 132 118 118 GLU GLU A . n A 1 133 LEU 133 119 119 LEU LEU A . n A 1 134 ARG 134 120 120 ARG ARG A . n A 1 135 GLY 135 121 121 GLY GLY A . n A 1 136 GLN 136 122 122 GLN GLN A . n A 1 137 ILE 137 123 123 ILE ILE A . n A 1 138 ALA 138 124 124 ALA ALA A . n A 1 139 ARG 139 125 125 ARG ARG A . n A 1 140 THR 140 126 126 THR THR A . n A 1 141 LEU 141 127 127 LEU LEU A . n A 1 142 ALA 142 128 128 ALA ALA A . n A 1 143 SER 143 129 129 SER SER A . n A 1 144 GLU 144 130 130 GLU GLU A . n A 1 145 TYR 145 131 131 TYR TYR A . n A 1 146 ASP 146 132 132 ASP ASP A . n A 1 147 ALA 147 133 133 ALA ALA A . n A 1 148 ASP 148 134 134 ASP ASP A . n A 1 149 PRO 149 135 135 PRO PRO A . n A 1 150 ALA 150 136 136 ALA ALA A . n A 1 151 SER 151 137 137 SER SER A . n A 1 152 ALA 152 138 138 ALA ALA A . n A 1 153 ASP 153 139 139 ASP ASP A . n A 1 154 SER 154 140 140 SER SER A . n A 1 155 ARG 155 141 141 ARG ARG A . n A 1 156 HIS 156 142 142 HIS HIS A . n A 1 157 TYR 157 143 143 TYR TYR A . n A 1 158 GLY 158 144 144 GLY GLY A . n A 1 159 ARG 159 145 145 ARG ARG A . n A 1 160 LEU 160 146 146 LEU LEU A . n A 1 161 ALA 161 147 147 ALA ALA A . n A 1 162 GLY 162 148 148 GLY GLY A . n A 1 163 PHE 163 149 149 PHE PHE A . n A 1 164 THR 164 150 150 THR THR A . n A 1 165 ASN 165 151 151 ASN ASN A . n A 1 166 ARG 166 152 152 ARG ARG A . n A 1 167 LYS 167 153 153 LYS LYS A . n A 1 168 ASP 168 154 154 ASP ASP A . n A 1 169 LYS 169 155 155 LYS LYS A . n A 1 170 HIS 170 156 ? ? ? A . n A 1 171 THR 171 157 ? ? ? A . n A 1 172 THR 172 158 ? ? ? A . n A 1 173 ARG 173 159 ? ? ? A . n A 1 174 ALA 174 160 ? ? ? A . n A 1 175 GLY 175 161 ? ? ? A . n A 1 176 TYR 176 162 ? ? ? A . n A 1 177 GLN 177 163 163 GLN GLN A . n A 1 178 PRO 178 164 164 PRO PRO A . n A 1 179 TRP 179 165 165 TRP TRP A . n A 1 180 VAL 180 166 166 VAL VAL A . n A 1 181 LEU 181 167 167 LEU LEU A . n A 1 182 LEU 182 168 168 LEU LEU A . n A 1 183 ARG 183 169 169 ARG ARG A . n A 1 184 GLU 184 170 170 GLU GLU A . n A 1 185 SER 185 171 171 SER SER A . n A 1 186 LYS 186 172 172 LYS LYS A . n A 1 187 GLY 187 173 173 GLY GLY A . n A 1 188 LYS 188 174 174 LYS LYS A . n A 1 189 THR 189 175 175 THR THR A . n A 1 190 ALA 190 176 176 ALA ALA A . n A 1 191 THR 191 177 177 THR THR A . n A 1 192 ALA 192 178 178 ALA ALA A . n A 1 193 GLY 193 179 179 GLY GLY A . n A 1 194 PRO 194 180 180 PRO PRO A . n A 1 195 ALA 195 181 181 ALA ALA A . n A 1 196 LEU 196 182 182 LEU LEU A . n A 1 197 VAL 197 183 183 VAL VAL A . n A 1 198 GLN 198 184 184 GLN GLN A . n A 1 199 GLN 199 185 185 GLN GLN A . n A 1 200 ALA 200 186 186 ALA ALA A . n A 1 201 GLY 201 187 187 GLY GLY A . n A 1 202 GLN 202 188 188 GLN GLN A . n A 1 203 GLN 203 189 189 GLN GLN A . n A 1 204 ILE 204 190 190 ILE ILE A . n A 1 205 GLU 205 191 191 GLU GLU A . n A 1 206 GLN 206 192 192 GLN GLN A . n A 1 207 ALA 207 193 193 ALA ALA A . n A 1 208 GLN 208 194 194 GLN GLN A . n A 1 209 ARG 209 195 195 ARG ARG A . n A 1 210 GLN 210 196 196 GLN GLN A . n A 1 211 GLN 211 197 197 GLN GLN A . n A 1 212 GLU 212 198 198 GLU GLU A . n A 1 213 LYS 213 199 ? ? ? A . n A 1 214 ALA 214 200 ? ? ? A . n A 1 215 ARG 215 201 ? ? ? A . n A 1 216 ARG 216 202 ? ? ? A . n A 1 217 LEU 217 203 ? ? ? A . n A 1 218 ALA 218 204 ? ? ? A . n A 1 219 SER 219 205 ? ? ? A . n A 1 220 LEU 220 206 ? ? ? A . n A 1 221 GLU 221 207 ? ? ? A . n A 1 222 LEU 222 208 ? ? ? A . n A 1 223 PRO 223 209 ? ? ? A . n A 1 224 GLU 224 210 ? ? ? A . n A 1 225 ARG 225 211 ? ? ? A . n A 1 226 GLN 226 212 ? ? ? A . n B 2 1 DC 1 1 1 DC DC C . n B 2 2 DC 2 2 2 DC DC C . n B 2 3 DT 3 3 3 DT DT C . n B 2 4 DT 4 4 4 DT DT C . n B 2 5 DT 5 5 5 DT DT C . n B 2 6 DC 6 6 6 DC DC C . n B 2 7 DC 7 7 7 DC DC C . n B 2 8 DC 8 8 8 DC DC C . n B 2 9 DC 9 9 9 DC DC C . n B 2 10 DC 10 10 10 DC DC C . n B 2 11 DT 11 11 11 DT DT C . n B 2 12 DA 12 12 12 DA DA C . n B 2 13 DC 13 13 13 DC DC C . n B 2 14 DC 14 14 14 DC DC C . n B 2 15 DC 15 15 15 DC DC C . n B 2 16 DG 16 16 16 DG DG C . n B 2 17 DA 17 17 17 DA DA C . n B 2 18 DA 18 18 18 DA DA C . n B 2 19 DG 19 19 19 DG DG C . n B 2 20 DG 20 20 20 DG DG C . n B 2 21 DG 21 21 21 DG DG C . n B 2 22 DT 22 22 22 DT DT C . n B 2 23 DG 23 23 23 DG DG C . n B 2 24 DG 24 24 24 DG DG C . n B 2 25 DG 25 25 25 DG DG C . n B 2 26 DG 26 26 26 DG DG C . n B 2 27 DG 27 27 27 DG DG C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 213 213 HOH HOH A . C 3 HOH 2 214 214 HOH HOH A . C 3 HOH 3 215 215 HOH HOH A . C 3 HOH 4 216 216 HOH HOH A . C 3 HOH 5 217 217 HOH HOH A . C 3 HOH 6 218 218 HOH HOH A . C 3 HOH 7 219 219 HOH HOH A . C 3 HOH 8 220 220 HOH HOH A . C 3 HOH 9 221 221 HOH HOH A . C 3 HOH 10 222 222 HOH HOH A . C 3 HOH 11 223 223 HOH HOH A . C 3 HOH 12 224 224 HOH HOH A . C 3 HOH 13 225 225 HOH HOH A . C 3 HOH 14 226 226 HOH HOH A . C 3 HOH 15 227 227 HOH HOH A . C 3 HOH 16 228 228 HOH HOH A . C 3 HOH 17 229 229 HOH HOH A . C 3 HOH 18 230 230 HOH HOH A . C 3 HOH 19 231 231 HOH HOH A . C 3 HOH 20 232 232 HOH HOH A . C 3 HOH 21 233 233 HOH HOH A . C 3 HOH 22 234 234 HOH HOH A . C 3 HOH 23 235 235 HOH HOH A . D 3 HOH 1 28 28 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-04-28 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 10.4478 _pdbx_refine_tls.origin_y 16.5103 _pdbx_refine_tls.origin_z -10.3449 _pdbx_refine_tls.T[1][1] -0.0096 _pdbx_refine_tls.T[2][2] -0.0394 _pdbx_refine_tls.T[3][3] 0.0008 _pdbx_refine_tls.T[1][2] 0.0120 _pdbx_refine_tls.T[1][3] 0.0041 _pdbx_refine_tls.T[2][3] 0.0040 _pdbx_refine_tls.L[1][1] 1.8203 _pdbx_refine_tls.L[2][2] 0.5064 _pdbx_refine_tls.L[3][3] 1.4252 _pdbx_refine_tls.L[1][2] -0.4026 _pdbx_refine_tls.L[1][3] -0.9693 _pdbx_refine_tls.L[2][3] 0.2647 _pdbx_refine_tls.S[1][1] -0.0210 _pdbx_refine_tls.S[1][2] -0.0488 _pdbx_refine_tls.S[1][3] -0.0944 _pdbx_refine_tls.S[2][1] -0.0278 _pdbx_refine_tls.S[2][2] -0.0313 _pdbx_refine_tls.S[2][3] -0.0443 _pdbx_refine_tls.S[3][1] 0.0784 _pdbx_refine_tls.S[3][2] 0.0602 _pdbx_refine_tls.S[3][3] 0.0524 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 4 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 198 _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHASER phasing . ? 1 REFMAC refinement 5.3.0040 ? 2 XDS 'data reduction' . ? 3 XSCALE 'data scaling' . ? 4 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" C DC 1 ? ? "C1'" C DC 1 ? ? N1 C DC 1 ? ? 110.17 108.30 1.87 0.30 N 2 1 "O4'" C DC 2 ? ? "C1'" C DC 2 ? ? N1 C DC 2 ? ? 111.39 108.30 3.09 0.30 N 3 1 "O4'" C DT 5 ? ? "C1'" C DT 5 ? ? N1 C DT 5 ? ? 110.39 108.30 2.09 0.30 N 4 1 "O4'" C DC 8 ? ? "C1'" C DC 8 ? ? N1 C DC 8 ? ? 110.34 108.30 2.04 0.30 N 5 1 "O4'" C DC 14 ? ? "C1'" C DC 14 ? ? N1 C DC 14 ? ? 110.17 108.30 1.87 0.30 N 6 1 "O4'" C DC 15 ? ? "C1'" C DC 15 ? ? N1 C DC 15 ? ? 110.72 108.30 2.42 0.30 N 7 1 "O4'" C DG 16 ? ? "C1'" C DG 16 ? ? N9 C DG 16 ? ? 110.60 108.30 2.30 0.30 N 8 1 "O4'" C DA 17 ? ? "C1'" C DA 17 ? ? N9 C DA 17 ? ? 111.34 108.30 3.04 0.30 N 9 1 "C3'" C DA 18 ? ? "O3'" C DA 18 ? ? P C DG 19 ? ? 127.17 119.70 7.47 1.20 Y 10 1 "O4'" C DG 20 ? ? "C1'" C DG 20 ? ? N9 C DG 20 ? ? 111.68 108.30 3.38 0.30 N 11 1 "O4'" C DT 22 ? ? "C1'" C DT 22 ? ? N1 C DT 22 ? ? 110.52 108.30 2.22 0.30 N 12 1 "O4'" C DG 26 ? ? "C1'" C DG 26 ? ? N9 C DG 26 ? ? 111.06 108.30 2.76 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 78 ? ? 71.15 65.68 2 1 ARG A 92 ? ? -104.93 44.93 3 1 PRO A 102 ? ? -37.46 121.24 4 1 SER A 171 ? ? -155.87 59.23 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 70 ? NH1 ? A ARG 84 NH1 2 1 Y 1 A ARG 70 ? NH2 ? A ARG 84 NH2 3 1 Y 1 A PHE 82 ? CG ? A PHE 96 CG 4 1 Y 1 A PHE 82 ? CD1 ? A PHE 96 CD1 5 1 Y 1 A PHE 82 ? CD2 ? A PHE 96 CD2 6 1 Y 1 A PHE 82 ? CE1 ? A PHE 96 CE1 7 1 Y 1 A PHE 82 ? CE2 ? A PHE 96 CE2 8 1 Y 1 A PHE 82 ? CZ ? A PHE 96 CZ 9 1 Y 1 A ARG 141 ? CD ? A ARG 155 CD 10 1 Y 1 A ARG 141 ? NE ? A ARG 155 NE 11 1 Y 1 A ARG 141 ? CZ ? A ARG 155 CZ 12 1 Y 1 A ARG 141 ? NH1 ? A ARG 155 NH1 13 1 Y 1 A ARG 141 ? NH2 ? A ARG 155 NH2 14 1 Y 1 A LYS 153 ? CD ? A LYS 167 CD 15 1 Y 1 A LYS 153 ? CE ? A LYS 167 CE 16 1 Y 1 A LYS 153 ? NZ ? A LYS 167 NZ 17 1 Y 1 A ASP 154 ? CG ? A ASP 168 CG 18 1 Y 1 A ASP 154 ? OD1 ? A ASP 168 OD1 19 1 Y 1 A ASP 154 ? OD2 ? A ASP 168 OD2 20 1 Y 1 A LYS 155 ? CG ? A LYS 169 CG 21 1 Y 1 A LYS 155 ? CD ? A LYS 169 CD 22 1 Y 1 A LYS 155 ? CE ? A LYS 169 CE 23 1 Y 1 A LYS 155 ? NZ ? A LYS 169 NZ 24 1 Y 1 A GLN 163 ? CB ? A GLN 177 CB 25 1 Y 1 A GLN 163 ? CG ? A GLN 177 CG 26 1 Y 1 A GLN 163 ? CD ? A GLN 177 CD 27 1 Y 1 A GLN 163 ? OE1 ? A GLN 177 OE1 28 1 Y 1 A GLN 163 ? NE2 ? A GLN 177 NE2 29 1 Y 1 A ARG 169 ? NE ? A ARG 183 NE 30 1 Y 1 A ARG 169 ? CZ ? A ARG 183 CZ 31 1 Y 1 A ARG 169 ? NH1 ? A ARG 183 NH1 32 1 Y 1 A ARG 169 ? NH2 ? A ARG 183 NH2 33 1 Y 1 A LYS 172 ? NZ ? A LYS 186 NZ 34 1 Y 1 A LYS 174 ? CD ? A LYS 188 CD 35 1 Y 1 A LYS 174 ? CE ? A LYS 188 CE 36 1 Y 1 A LYS 174 ? NZ ? A LYS 188 NZ 37 1 Y 1 A GLN 192 ? CG ? A GLN 206 CG 38 1 Y 1 A GLN 192 ? CD ? A GLN 206 CD 39 1 Y 1 A GLN 192 ? OE1 ? A GLN 206 OE1 40 1 Y 1 A GLN 192 ? NE2 ? A GLN 206 NE2 41 1 Y 1 A GLN 194 ? CG ? A GLN 208 CG 42 1 Y 1 A GLN 194 ? CD ? A GLN 208 CD 43 1 Y 1 A GLN 194 ? OE1 ? A GLN 208 OE1 44 1 Y 1 A GLN 194 ? NE2 ? A GLN 208 NE2 45 1 Y 1 A ARG 195 ? CD ? A ARG 209 CD 46 1 Y 1 A ARG 195 ? NE ? A ARG 209 NE 47 1 Y 1 A ARG 195 ? CZ ? A ARG 209 CZ 48 1 Y 1 A ARG 195 ? NH1 ? A ARG 209 NH1 49 1 Y 1 A ARG 195 ? NH2 ? A ARG 209 NH2 50 1 Y 1 A GLU 198 ? CG ? A GLU 212 CG 51 1 Y 1 A GLU 198 ? CD ? A GLU 212 CD 52 1 Y 1 A GLU 198 ? OE1 ? A GLU 212 OE1 53 1 Y 1 A GLU 198 ? OE2 ? A GLU 212 OE2 54 1 Y 1 C DC 1 ? "O5'" ? B DC 1 "O5'" 55 1 Y 1 C DC 1 ? "C5'" ? B DC 1 "C5'" # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -13 ? A MET 1 2 1 Y 1 A GLY -12 ? A GLY 2 3 1 Y 1 A SER -11 ? A SER 3 4 1 Y 1 A SER -10 ? A SER 4 5 1 Y 1 A HIS -9 ? A HIS 5 6 1 Y 1 A SER -8 ? A SER 6 7 1 Y 1 A SER -7 ? A SER 7 8 1 Y 1 A GLY -6 ? A GLY 8 9 1 Y 1 A LEU -5 ? A LEU 9 10 1 Y 1 A VAL -4 ? A VAL 10 11 1 Y 1 A PRO -3 ? A PRO 11 12 1 Y 1 A ARG -2 ? A ARG 12 13 1 Y 1 A GLY -1 ? A GLY 13 14 1 Y 1 A SER 0 ? A SER 14 15 1 Y 1 A MET 1 ? A MET 15 16 1 Y 1 A LYS 2 ? A LYS 16 17 1 Y 1 A ASN 3 ? A ASN 17 18 1 Y 1 A HIS 156 ? A HIS 170 19 1 Y 1 A THR 157 ? A THR 171 20 1 Y 1 A THR 158 ? A THR 172 21 1 Y 1 A ARG 159 ? A ARG 173 22 1 Y 1 A ALA 160 ? A ALA 174 23 1 Y 1 A GLY 161 ? A GLY 175 24 1 Y 1 A TYR 162 ? A TYR 176 25 1 Y 1 A LYS 199 ? A LYS 213 26 1 Y 1 A ALA 200 ? A ALA 214 27 1 Y 1 A ARG 201 ? A ARG 215 28 1 Y 1 A ARG 202 ? A ARG 216 29 1 Y 1 A LEU 203 ? A LEU 217 30 1 Y 1 A ALA 204 ? A ALA 218 31 1 Y 1 A SER 205 ? A SER 219 32 1 Y 1 A LEU 206 ? A LEU 220 33 1 Y 1 A GLU 207 ? A GLU 221 34 1 Y 1 A LEU 208 ? A LEU 222 35 1 Y 1 A PRO 209 ? A PRO 223 36 1 Y 1 A GLU 210 ? A GLU 224 37 1 Y 1 A ARG 211 ? A ARG 225 38 1 Y 1 A GLN 212 ? A GLN 226 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MET N N N N 373 MET CA C N S 374 MET C C N N 375 MET O O N N 376 MET CB C N N 377 MET CG C N N 378 MET SD S N N 379 MET CE C N N 380 MET OXT O N N 381 MET H H N N 382 MET H2 H N N 383 MET HA H N N 384 MET HB2 H N N 385 MET HB3 H N N 386 MET HG2 H N N 387 MET HG3 H N N 388 MET HE1 H N N 389 MET HE2 H N N 390 MET HE3 H N N 391 MET HXT H N N 392 PHE N N N N 393 PHE CA C N S 394 PHE C C N N 395 PHE O O N N 396 PHE CB C N N 397 PHE CG C Y N 398 PHE CD1 C Y N 399 PHE CD2 C Y N 400 PHE CE1 C Y N 401 PHE CE2 C Y N 402 PHE CZ C Y N 403 PHE OXT O N N 404 PHE H H N N 405 PHE H2 H N N 406 PHE HA H N N 407 PHE HB2 H N N 408 PHE HB3 H N N 409 PHE HD1 H N N 410 PHE HD2 H N N 411 PHE HE1 H N N 412 PHE HE2 H N N 413 PHE HZ H N N 414 PHE HXT H N N 415 PRO N N N N 416 PRO CA C N S 417 PRO C C N N 418 PRO O O N N 419 PRO CB C N N 420 PRO CG C N N 421 PRO CD C N N 422 PRO OXT O N N 423 PRO H H N N 424 PRO HA H N N 425 PRO HB2 H N N 426 PRO HB3 H N N 427 PRO HG2 H N N 428 PRO HG3 H N N 429 PRO HD2 H N N 430 PRO HD3 H N N 431 PRO HXT H N N 432 SER N N N N 433 SER CA C N S 434 SER C C N N 435 SER O O N N 436 SER CB C N N 437 SER OG O N N 438 SER OXT O N N 439 SER H H N N 440 SER H2 H N N 441 SER HA H N N 442 SER HB2 H N N 443 SER HB3 H N N 444 SER HG H N N 445 SER HXT H N N 446 THR N N N N 447 THR CA C N S 448 THR C C N N 449 THR O O N N 450 THR CB C N R 451 THR OG1 O N N 452 THR CG2 C N N 453 THR OXT O N N 454 THR H H N N 455 THR H2 H N N 456 THR HA H N N 457 THR HB H N N 458 THR HG1 H N N 459 THR HG21 H N N 460 THR HG22 H N N 461 THR HG23 H N N 462 THR HXT H N N 463 TRP N N N N 464 TRP CA C N S 465 TRP C C N N 466 TRP O O N N 467 TRP CB C N N 468 TRP CG C Y N 469 TRP CD1 C Y N 470 TRP CD2 C Y N 471 TRP NE1 N Y N 472 TRP CE2 C Y N 473 TRP CE3 C Y N 474 TRP CZ2 C Y N 475 TRP CZ3 C Y N 476 TRP CH2 C Y N 477 TRP OXT O N N 478 TRP H H N N 479 TRP H2 H N N 480 TRP HA H N N 481 TRP HB2 H N N 482 TRP HB3 H N N 483 TRP HD1 H N N 484 TRP HE1 H N N 485 TRP HE3 H N N 486 TRP HZ2 H N N 487 TRP HZ3 H N N 488 TRP HH2 H N N 489 TRP HXT H N N 490 TYR N N N N 491 TYR CA C N S 492 TYR C C N N 493 TYR O O N N 494 TYR CB C N N 495 TYR CG C Y N 496 TYR CD1 C Y N 497 TYR CD2 C Y N 498 TYR CE1 C Y N 499 TYR CE2 C Y N 500 TYR CZ C Y N 501 TYR OH O N N 502 TYR OXT O N N 503 TYR H H N N 504 TYR H2 H N N 505 TYR HA H N N 506 TYR HB2 H N N 507 TYR HB3 H N N 508 TYR HD1 H N N 509 TYR HD2 H N N 510 TYR HE1 H N N 511 TYR HE2 H N N 512 TYR HH H N N 513 TYR HXT H N N 514 VAL N N N N 515 VAL CA C N S 516 VAL C C N N 517 VAL O O N N 518 VAL CB C N N 519 VAL CG1 C N N 520 VAL CG2 C N N 521 VAL OXT O N N 522 VAL H H N N 523 VAL H2 H N N 524 VAL HA H N N 525 VAL HB H N N 526 VAL HG11 H N N 527 VAL HG12 H N N 528 VAL HG13 H N N 529 VAL HG21 H N N 530 VAL HG22 H N N 531 VAL HG23 H N N 532 VAL HXT H N N 533 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PRO N CA sing N N 409 PRO N CD sing N N 410 PRO N H sing N N 411 PRO CA C sing N N 412 PRO CA CB sing N N 413 PRO CA HA sing N N 414 PRO C O doub N N 415 PRO C OXT sing N N 416 PRO CB CG sing N N 417 PRO CB HB2 sing N N 418 PRO CB HB3 sing N N 419 PRO CG CD sing N N 420 PRO CG HG2 sing N N 421 PRO CG HG3 sing N N 422 PRO CD HD2 sing N N 423 PRO CD HD3 sing N N 424 PRO OXT HXT sing N N 425 SER N CA sing N N 426 SER N H sing N N 427 SER N H2 sing N N 428 SER CA C sing N N 429 SER CA CB sing N N 430 SER CA HA sing N N 431 SER C O doub N N 432 SER C OXT sing N N 433 SER CB OG sing N N 434 SER CB HB2 sing N N 435 SER CB HB3 sing N N 436 SER OG HG sing N N 437 SER OXT HXT sing N N 438 THR N CA sing N N 439 THR N H sing N N 440 THR N H2 sing N N 441 THR CA C sing N N 442 THR CA CB sing N N 443 THR CA HA sing N N 444 THR C O doub N N 445 THR C OXT sing N N 446 THR CB OG1 sing N N 447 THR CB CG2 sing N N 448 THR CB HB sing N N 449 THR OG1 HG1 sing N N 450 THR CG2 HG21 sing N N 451 THR CG2 HG22 sing N N 452 THR CG2 HG23 sing N N 453 THR OXT HXT sing N N 454 TRP N CA sing N N 455 TRP N H sing N N 456 TRP N H2 sing N N 457 TRP CA C sing N N 458 TRP CA CB sing N N 459 TRP CA HA sing N N 460 TRP C O doub N N 461 TRP C OXT sing N N 462 TRP CB CG sing N N 463 TRP CB HB2 sing N N 464 TRP CB HB3 sing N N 465 TRP CG CD1 doub Y N 466 TRP CG CD2 sing Y N 467 TRP CD1 NE1 sing Y N 468 TRP CD1 HD1 sing N N 469 TRP CD2 CE2 doub Y N 470 TRP CD2 CE3 sing Y N 471 TRP NE1 CE2 sing Y N 472 TRP NE1 HE1 sing N N 473 TRP CE2 CZ2 sing Y N 474 TRP CE3 CZ3 doub Y N 475 TRP CE3 HE3 sing N N 476 TRP CZ2 CH2 doub Y N 477 TRP CZ2 HZ2 sing N N 478 TRP CZ3 CH2 sing Y N 479 TRP CZ3 HZ3 sing N N 480 TRP CH2 HH2 sing N N 481 TRP OXT HXT sing N N 482 TYR N CA sing N N 483 TYR N H sing N N 484 TYR N H2 sing N N 485 TYR CA C sing N N 486 TYR CA CB sing N N 487 TYR CA HA sing N N 488 TYR C O doub N N 489 TYR C OXT sing N N 490 TYR CB CG sing N N 491 TYR CB HB2 sing N N 492 TYR CB HB3 sing N N 493 TYR CG CD1 doub Y N 494 TYR CG CD2 sing Y N 495 TYR CD1 CE1 sing Y N 496 TYR CD1 HD1 sing N N 497 TYR CD2 CE2 doub Y N 498 TYR CD2 HD2 sing N N 499 TYR CE1 CZ doub Y N 500 TYR CE1 HE1 sing N N 501 TYR CE2 CZ sing Y N 502 TYR CE2 HE2 sing N N 503 TYR CZ OH sing N N 504 TYR OH HH sing N N 505 TYR OXT HXT sing N N 506 VAL N CA sing N N 507 VAL N H sing N N 508 VAL N H2 sing N N 509 VAL CA C sing N N 510 VAL CA CB sing N N 511 VAL CA HA sing N N 512 VAL C O doub N N 513 VAL C OXT sing N N 514 VAL CB CG1 sing N N 515 VAL CB CG2 sing N N 516 VAL CB HB sing N N 517 VAL CG1 HG11 sing N N 518 VAL CG1 HG12 sing N N 519 VAL CG1 HG13 sing N N 520 VAL CG2 HG21 sing N N 521 VAL CG2 HG22 sing N N 522 VAL CG2 HG23 sing N N 523 VAL OXT HXT sing N N 524 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3H25 'b-form double helix' 3H25 'hairpin loop' 3H25 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DC 7 1_555 B DG 27 1_555 0.375 -0.248 1.091 -21.461 -10.244 -1.717 1 C_DC7:DG27_C C 7 ? C 27 ? 19 1 1 B DC 8 1_555 B DG 26 1_555 0.253 -0.166 0.181 -9.783 -2.492 0.774 2 C_DC8:DG26_C C 8 ? C 26 ? 19 1 1 B DC 9 1_555 B DG 25 1_555 0.092 -0.019 0.191 2.040 -11.184 -3.034 3 C_DC9:DG25_C C 9 ? C 25 ? 19 1 1 B DC 10 1_555 B DG 24 1_555 0.050 -0.193 0.800 -7.782 -18.589 -3.240 4 C_DC10:DG24_C C 10 ? C 24 ? 19 1 1 B DT 11 1_555 B DG 23 1_555 2.484 -0.592 0.178 7.722 -10.186 2.046 5 C_DT11:DG23_C C 11 ? C 23 ? 28 1 1 B DA 12 1_555 B DT 22 1_555 0.529 0.109 0.608 12.893 -18.866 3.724 6 C_DA12:DT22_C C 12 ? C 22 ? 20 1 1 B DC 13 1_555 B DG 21 1_555 0.792 -0.234 0.238 12.300 -22.545 -3.527 7 C_DC13:DG21_C C 13 ? C 21 ? 19 1 1 B DC 14 1_555 B DG 20 1_555 1.020 -0.382 0.324 -5.886 -13.162 2.141 8 C_DC14:DG20_C C 14 ? C 20 ? 19 1 1 B DC 15 1_555 B DG 19 1_555 1.138 0.160 0.083 10.608 10.357 0.486 9 C_DC15:DG19_C C 15 ? C 19 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DC 7 1_555 B DG 27 1_555 B DC 8 1_555 B DG 26 1_555 0.790 0.194 3.066 6.213 -3.485 33.467 0.857 -0.406 3.122 -5.967 -10.640 34.195 1 CC_DC7DC8:DG26DG27_CC C 7 ? C 27 ? C 8 ? C 26 ? 1 B DC 8 1_555 B DG 26 1_555 B DC 9 1_555 B DG 25 1_555 -1.105 0.179 3.196 -1.313 -4.428 31.740 1.105 1.769 3.184 -8.043 2.385 32.066 2 CC_DC8DC9:DG25DG26_CC C 8 ? C 26 ? C 9 ? C 25 ? 1 B DC 9 1_555 B DG 25 1_555 B DC 10 1_555 B DG 24 1_555 -0.018 -0.238 3.731 -3.232 -0.086 35.214 -0.377 -0.515 3.719 -0.142 5.329 35.358 3 CC_DC9DC10:DG24DG25_CC C 9 ? C 25 ? C 10 ? C 24 ? 1 B DC 10 1_555 B DG 24 1_555 B DT 11 1_555 B DG 23 1_555 0.225 0.468 3.028 3.401 0.185 44.498 0.600 -0.007 3.038 0.244 -4.483 44.622 4 CC_DC10DT11:DG23DG24_CC C 10 ? C 24 ? C 11 ? C 23 ? 1 B DT 11 1_555 B DG 23 1_555 B DA 12 1_555 B DT 22 1_555 -0.630 0.937 3.214 -1.949 -0.022 33.868 1.609 0.771 3.243 -0.037 3.341 33.923 5 CC_DT11DA12:DT22DG23_CC C 11 ? C 23 ? C 12 ? C 22 ? 1 B DA 12 1_555 B DT 22 1_555 B DC 13 1_555 B DG 21 1_555 -0.137 -0.449 3.443 -1.036 -0.019 32.803 -0.791 0.056 3.446 -0.033 1.833 32.819 6 CC_DA12DC13:DG21DT22_CC C 12 ? C 22 ? C 13 ? C 21 ? 1 B DC 13 1_555 B DG 21 1_555 B DC 14 1_555 B DG 20 1_555 0.649 -0.604 3.651 2.881 1.695 39.359 -1.116 -0.581 3.660 2.511 -4.269 39.495 7 CC_DC13DC14:DG20DG21_CC C 13 ? C 21 ? C 14 ? C 20 ? 1 B DC 14 1_555 B DG 20 1_555 B DC 15 1_555 B DG 19 1_555 0.619 0.681 3.209 4.046 6.714 27.104 -0.201 -0.306 3.334 13.960 -8.412 28.195 8 CC_DC14DC15:DG19DG20_CC C 14 ? C 20 ? C 15 ? C 19 ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3H20 _pdbx_initial_refinement_model.details 'CATALYTIC DOMAIN OF PDB 3H20, MODEL OF IDEAL B-DNA' #