HEADER TRANSFERASE 16-APR-09 3H3A TITLE THE COMPLEX STRUCTURE OF CCA-ADDING ENZYME WITH CTP COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRNA NUCLEOTIDYL TRANSFERASE-RELATED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 437-863; COMPND 5 SYNONYM: TRNA NUCLEOTIDYLTRANSFERASE, TRNA ADENYL-/CYTIDYL- COMPND 6 TRANSFERASE, TRNA CCA-PYROPHOSPHORYLASE, TRNA-NT; COMPND 7 EC: 2.7.7.25; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 2336; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET-22B KEYWDS TRANSFERASE/RNA, NUCLEOTIDE-BINDING, NUCLEOTIDYLTRANSFERASE, RNA- KEYWDS 2 BINDING, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.TOH,K.TOMITA REVDAT 3 01-NOV-23 3H3A 1 REMARK SEQADV REVDAT 2 05-FEB-14 3H3A 1 JRNL VERSN REVDAT 1 13-OCT-09 3H3A 0 JRNL AUTH Y.TOH,D.TAKESHITA,T.NUMATA,S.FUKAI,O.NUREKI,K.TOMITA JRNL TITL MECHANISM FOR THE DEFINITION OF ELONGATION AND TERMINATION JRNL TITL 2 BY THE CLASS II CCA-ADDING ENZYME JRNL REF EMBO J. V. 28 3353 2009 JRNL REFN ISSN 0261-4189 JRNL PMID 19745807 JRNL DOI 10.1038/EMBOJ.2009.260 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.450 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 3 NUMBER OF REFLECTIONS : 42183 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.235 REMARK 3 R VALUE (WORKING SET) : 0.234 REMARK 3 FREE R VALUE : 0.269 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 2122 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.7950 - 6.8864 0.89 2623 133 0.2155 0.2510 REMARK 3 2 6.8864 - 5.4750 0.99 2817 163 0.2149 0.2671 REMARK 3 3 5.4750 - 4.7856 1.00 2804 138 0.1800 0.1962 REMARK 3 4 4.7856 - 4.3492 1.00 2800 147 0.1683 0.1970 REMARK 3 5 4.3492 - 4.0381 0.99 2798 144 0.1863 0.2337 REMARK 3 6 4.0381 - 3.8005 0.99 2777 141 0.2178 0.2638 REMARK 3 7 3.8005 - 3.6104 0.99 2752 153 0.2430 0.2703 REMARK 3 8 3.6104 - 3.4534 0.99 2744 142 0.2646 0.2758 REMARK 3 9 3.4534 - 3.3206 0.98 2715 148 0.2870 0.3262 REMARK 3 10 3.3206 - 3.2062 0.96 2708 112 0.2961 0.3271 REMARK 3 11 3.2062 - 3.1060 0.95 2661 144 0.3048 0.3296 REMARK 3 12 3.1060 - 3.0173 0.94 2548 152 0.3302 0.3413 REMARK 3 13 3.0173 - 2.9379 0.92 2551 140 0.3434 0.3488 REMARK 3 14 2.9379 - 2.8663 0.89 2433 130 0.3525 0.4047 REMARK 3 15 2.8663 - 2.8012 0.84 2330 135 0.3581 0.3790 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.29 REMARK 3 B_SOL : 82.90 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.700 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 86.23 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 5.25600 REMARK 3 B22 (A**2) : 11.37600 REMARK 3 B33 (A**2) : -8.17800 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.83000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 7051 REMARK 3 ANGLE : 1.510 9487 REMARK 3 CHIRALITY : 0.092 1055 REMARK 3 PLANARITY : 0.007 1200 REMARK 3 DIHEDRAL : 21.197 2713 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3H3A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-APR-09. REMARK 100 THE DEPOSITION ID IS D_1000052637. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUN-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42184 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.03900 REMARK 200 FOR THE DATA SET : 22.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.36900 REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 3H37 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 71.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% ETHYLENE GLYCOL, 0.05M TRIS-CL REMARK 280 PH8.4, 2MM CTP, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 95.22550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.79300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 95.22550 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 31.79300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 104 REMARK 465 LEU A 105 REMARK 465 GLU A 106 REMARK 465 TYR A 107 REMARK 465 TYR A 108 REMARK 465 GLU A 109 REMARK 465 SER A 110 REMARK 465 PRO A 111 REMARK 465 ALA A 112 REMARK 465 LYS A 113 REMARK 465 LEU A 114 REMARK 465 PRO A 115 REMARK 465 ASP A 116 REMARK 465 VAL A 117 REMARK 465 ALA A 432 REMARK 465 ALA A 433 REMARK 465 LEU A 434 REMARK 465 GLU A 435 REMARK 465 HIS A 436 REMARK 465 HIS A 437 REMARK 465 HIS A 438 REMARK 465 HIS A 439 REMARK 465 HIS A 440 REMARK 465 HIS A 441 REMARK 465 TYR B 107 REMARK 465 TYR B 108 REMARK 465 GLU B 109 REMARK 465 SER B 110 REMARK 465 PRO B 111 REMARK 465 ALA B 112 REMARK 465 LYS B 113 REMARK 465 LEU B 114 REMARK 465 GLU B 427 REMARK 465 GLY B 428 REMARK 465 LYS B 429 REMARK 465 LEU B 430 REMARK 465 ALA B 431 REMARK 465 ALA B 432 REMARK 465 ALA B 433 REMARK 465 LEU B 434 REMARK 465 GLU B 435 REMARK 465 HIS B 436 REMARK 465 HIS B 437 REMARK 465 HIS B 438 REMARK 465 HIS B 439 REMARK 465 HIS B 440 REMARK 465 HIS B 441 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OH TYR A 281 OH TYR A 382 4546 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 THR A 373 CB - CA - C ANGL. DEV. = -25.0 DEGREES REMARK 500 GLU A 381 CB - CA - C ANGL. DEV. = -13.9 DEGREES REMARK 500 GLU A 381 N - CA - C ANGL. DEV. = 23.1 DEGREES REMARK 500 ASP A 412 CB - CA - C ANGL. DEV. = -19.8 DEGREES REMARK 500 VAL B 331 CB - CA - C ANGL. DEV. = -16.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 84 -6.94 87.16 REMARK 500 SER A 120 66.79 -49.47 REMARK 500 MET A 136 148.02 87.52 REMARK 500 ASP A 189 5.35 85.10 REMARK 500 LEU A 305 166.69 -45.36 REMARK 500 ASN A 308 -10.69 94.30 REMARK 500 ARG A 330 60.09 22.41 REMARK 500 THR A 373 -10.35 51.28 REMARK 500 LYS A 377 -133.32 62.63 REMARK 500 ASN A 379 102.31 91.77 REMARK 500 GLU A 381 -59.50 29.49 REMARK 500 TYR A 382 -77.34 -64.18 REMARK 500 ILE A 388 5.55 96.76 REMARK 500 THR A 410 -143.33 -104.36 REMARK 500 ASP A 412 -11.16 55.64 REMARK 500 THR A 426 2.36 -166.49 REMARK 500 GLU A 427 110.99 64.84 REMARK 500 LYS A 429 -129.36 77.37 REMARK 500 LEU A 430 121.83 -179.83 REMARK 500 ARG B 104 26.43 92.56 REMARK 500 ASP B 116 97.63 -33.52 REMARK 500 VAL B 117 30.98 37.02 REMARK 500 GLU B 329 -17.23 86.30 REMARK 500 LYS B 341 -99.38 -23.61 REMARK 500 GLU B 376 25.69 42.13 REMARK 500 ARG B 411 -173.12 -61.41 REMARK 500 ASP B 412 -81.87 -102.76 REMARK 500 GLU B 413 -60.42 -27.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CTP A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CTP B 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3H37 RELATED DB: PDB REMARK 900 RELATED ID: 3H38 RELATED DB: PDB REMARK 900 RELATED ID: 3H39 RELATED DB: PDB DBREF 3H3A A 2 428 UNP Q9WZH4 Q9WZH4_THEMA 437 863 DBREF 3H3A B 2 428 UNP Q9WZH4 Q9WZH4_THEMA 437 863 SEQADV 3H3A MET A 1 UNP Q9WZH4 EXPRESSION TAG SEQADV 3H3A LYS A 429 UNP Q9WZH4 EXPRESSION TAG SEQADV 3H3A LEU A 430 UNP Q9WZH4 EXPRESSION TAG SEQADV 3H3A ALA A 431 UNP Q9WZH4 EXPRESSION TAG SEQADV 3H3A ALA A 432 UNP Q9WZH4 EXPRESSION TAG SEQADV 3H3A ALA A 433 UNP Q9WZH4 EXPRESSION TAG SEQADV 3H3A LEU A 434 UNP Q9WZH4 EXPRESSION TAG SEQADV 3H3A GLU A 435 UNP Q9WZH4 EXPRESSION TAG SEQADV 3H3A HIS A 436 UNP Q9WZH4 EXPRESSION TAG SEQADV 3H3A HIS A 437 UNP Q9WZH4 EXPRESSION TAG SEQADV 3H3A HIS A 438 UNP Q9WZH4 EXPRESSION TAG SEQADV 3H3A HIS A 439 UNP Q9WZH4 EXPRESSION TAG SEQADV 3H3A HIS A 440 UNP Q9WZH4 EXPRESSION TAG SEQADV 3H3A HIS A 441 UNP Q9WZH4 EXPRESSION TAG SEQADV 3H3A MET B 1 UNP Q9WZH4 EXPRESSION TAG SEQADV 3H3A LYS B 429 UNP Q9WZH4 EXPRESSION TAG SEQADV 3H3A LEU B 430 UNP Q9WZH4 EXPRESSION TAG SEQADV 3H3A ALA B 431 UNP Q9WZH4 EXPRESSION TAG SEQADV 3H3A ALA B 432 UNP Q9WZH4 EXPRESSION TAG SEQADV 3H3A ALA B 433 UNP Q9WZH4 EXPRESSION TAG SEQADV 3H3A LEU B 434 UNP Q9WZH4 EXPRESSION TAG SEQADV 3H3A GLU B 435 UNP Q9WZH4 EXPRESSION TAG SEQADV 3H3A HIS B 436 UNP Q9WZH4 EXPRESSION TAG SEQADV 3H3A HIS B 437 UNP Q9WZH4 EXPRESSION TAG SEQADV 3H3A HIS B 438 UNP Q9WZH4 EXPRESSION TAG SEQADV 3H3A HIS B 439 UNP Q9WZH4 EXPRESSION TAG SEQADV 3H3A HIS B 440 UNP Q9WZH4 EXPRESSION TAG SEQADV 3H3A HIS B 441 UNP Q9WZH4 EXPRESSION TAG SEQRES 1 A 441 MET GLN ILE PHE ARG ASP VAL SER LYS LEU LEU VAL GLU SEQRES 2 A 441 ARG VAL ASP PRO LYS ILE LEU ASN LEU PHE ARG LEU LEU SEQRES 3 A 441 GLY LYS PHE GLY ASP GLU VAL ASN MET PRO VAL TYR VAL SEQRES 4 A 441 VAL GLY GLY PHE VAL ARG ASP LEU LEU LEU GLY ILE LYS SEQRES 5 A 441 ASN LEU ASP ILE ASP ILE VAL VAL GLU GLY ASN ALA LEU SEQRES 6 A 441 GLU PHE ALA GLU TYR ALA LYS ARG PHE LEU PRO GLY LYS SEQRES 7 A 441 LEU VAL LYS HIS ASP LYS PHE MET THR ALA SER LEU PHE SEQRES 8 A 441 LEU LYS GLY GLY LEU ARG ILE ASP ILE ALA THR ALA ARG SEQRES 9 A 441 LEU GLU TYR TYR GLU SER PRO ALA LYS LEU PRO ASP VAL SEQRES 10 A 441 GLU MET SER THR ILE LYS LYS ASP LEU TYR ARG ARG ASP SEQRES 11 A 441 PHE THR ILE ASN ALA MET ALA ILE LYS LEU ASN PRO LYS SEQRES 12 A 441 ASP PHE GLY LEU LEU ILE ASP PHE PHE GLY GLY TYR ARG SEQRES 13 A 441 ASP LEU LYS GLU GLY VAL ILE ARG VAL LEU HIS THR LEU SEQRES 14 A 441 SER PHE VAL ASP ASP PRO THR ARG ILE LEU ARG ALA ILE SEQRES 15 A 441 ARG PHE GLU GLN ARG PHE ASP PHE ARG ILE GLU GLU THR SEQRES 16 A 441 THR GLU ARG LEU LEU LYS GLN ALA VAL GLU GLU GLY TYR SEQRES 17 A 441 LEU GLU ARG THR THR GLY PRO ARG LEU ARG GLN GLU LEU SEQRES 18 A 441 GLU LYS ILE LEU GLU GLU LYS ASN PRO LEU LYS SER ILE SEQRES 19 A 441 ARG ARG MET ALA GLN PHE ASP VAL ILE LYS HIS LEU PHE SEQRES 20 A 441 PRO LYS THR TYR TYR THR PRO SER MET ASP GLU LYS MET SEQRES 21 A 441 GLU ASN LEU PHE ARG ASN ILE PRO TRP VAL GLU GLU ASN SEQRES 22 A 441 PHE GLY GLU VAL ASP ARG PHE TYR ALA VAL LEU HIS VAL SEQRES 23 A 441 PHE LEU GLU PHE TYR ASP ASP GLU SER TRP LYS GLU VAL SEQRES 24 A 441 ARG ASP ARG TYR SER LEU ARG ARG ASN LEU ILE ASN GLU SEQRES 25 A 441 ILE ARG HIS VAL GLU LYS SER ALA PRO ALA LEU LEU GLU SEQRES 26 A 441 MET LEU SER GLU ARG VAL PRO ALA SER PHE VAL TYR PRO SEQRES 27 A 441 LEU VAL LYS GLY VAL SER ASN GLU THR ILE CYS HIS PHE SEQRES 28 A 441 LEU ALA TYR LEU SER GLY GLU LYS GLU GLY LEU PHE LYS SEQRES 29 A 441 SER TYR LEU LEU LYS ILE LYS ASN THR LYS LEU GLU LYS SEQRES 30 A 441 ILE ASN GLY GLU TYR LEU ILE ARG LYS GLY ILE THR SER SEQRES 31 A 441 GLY LYS ILE ILE GLY GLU VAL LEU GLU LYS ILE LEU MET SEQRES 32 A 441 LYS LYS LEU ASP GLY ASP THR ARG ASP GLU GLU GLU ILE SEQRES 33 A 441 LEU GLU GLU VAL LEU ALA SER LEU GLU THR GLU GLY LYS SEQRES 34 A 441 LEU ALA ALA ALA LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 441 MET GLN ILE PHE ARG ASP VAL SER LYS LEU LEU VAL GLU SEQRES 2 B 441 ARG VAL ASP PRO LYS ILE LEU ASN LEU PHE ARG LEU LEU SEQRES 3 B 441 GLY LYS PHE GLY ASP GLU VAL ASN MET PRO VAL TYR VAL SEQRES 4 B 441 VAL GLY GLY PHE VAL ARG ASP LEU LEU LEU GLY ILE LYS SEQRES 5 B 441 ASN LEU ASP ILE ASP ILE VAL VAL GLU GLY ASN ALA LEU SEQRES 6 B 441 GLU PHE ALA GLU TYR ALA LYS ARG PHE LEU PRO GLY LYS SEQRES 7 B 441 LEU VAL LYS HIS ASP LYS PHE MET THR ALA SER LEU PHE SEQRES 8 B 441 LEU LYS GLY GLY LEU ARG ILE ASP ILE ALA THR ALA ARG SEQRES 9 B 441 LEU GLU TYR TYR GLU SER PRO ALA LYS LEU PRO ASP VAL SEQRES 10 B 441 GLU MET SER THR ILE LYS LYS ASP LEU TYR ARG ARG ASP SEQRES 11 B 441 PHE THR ILE ASN ALA MET ALA ILE LYS LEU ASN PRO LYS SEQRES 12 B 441 ASP PHE GLY LEU LEU ILE ASP PHE PHE GLY GLY TYR ARG SEQRES 13 B 441 ASP LEU LYS GLU GLY VAL ILE ARG VAL LEU HIS THR LEU SEQRES 14 B 441 SER PHE VAL ASP ASP PRO THR ARG ILE LEU ARG ALA ILE SEQRES 15 B 441 ARG PHE GLU GLN ARG PHE ASP PHE ARG ILE GLU GLU THR SEQRES 16 B 441 THR GLU ARG LEU LEU LYS GLN ALA VAL GLU GLU GLY TYR SEQRES 17 B 441 LEU GLU ARG THR THR GLY PRO ARG LEU ARG GLN GLU LEU SEQRES 18 B 441 GLU LYS ILE LEU GLU GLU LYS ASN PRO LEU LYS SER ILE SEQRES 19 B 441 ARG ARG MET ALA GLN PHE ASP VAL ILE LYS HIS LEU PHE SEQRES 20 B 441 PRO LYS THR TYR TYR THR PRO SER MET ASP GLU LYS MET SEQRES 21 B 441 GLU ASN LEU PHE ARG ASN ILE PRO TRP VAL GLU GLU ASN SEQRES 22 B 441 PHE GLY GLU VAL ASP ARG PHE TYR ALA VAL LEU HIS VAL SEQRES 23 B 441 PHE LEU GLU PHE TYR ASP ASP GLU SER TRP LYS GLU VAL SEQRES 24 B 441 ARG ASP ARG TYR SER LEU ARG ARG ASN LEU ILE ASN GLU SEQRES 25 B 441 ILE ARG HIS VAL GLU LYS SER ALA PRO ALA LEU LEU GLU SEQRES 26 B 441 MET LEU SER GLU ARG VAL PRO ALA SER PHE VAL TYR PRO SEQRES 27 B 441 LEU VAL LYS GLY VAL SER ASN GLU THR ILE CYS HIS PHE SEQRES 28 B 441 LEU ALA TYR LEU SER GLY GLU LYS GLU GLY LEU PHE LYS SEQRES 29 B 441 SER TYR LEU LEU LYS ILE LYS ASN THR LYS LEU GLU LYS SEQRES 30 B 441 ILE ASN GLY GLU TYR LEU ILE ARG LYS GLY ILE THR SER SEQRES 31 B 441 GLY LYS ILE ILE GLY GLU VAL LEU GLU LYS ILE LEU MET SEQRES 32 B 441 LYS LYS LEU ASP GLY ASP THR ARG ASP GLU GLU GLU ILE SEQRES 33 B 441 LEU GLU GLU VAL LEU ALA SER LEU GLU THR GLU GLY LYS SEQRES 34 B 441 LEU ALA ALA ALA LEU GLU HIS HIS HIS HIS HIS HIS HET CTP A 501 29 HET CTP B 502 29 HETNAM CTP CYTIDINE-5'-TRIPHOSPHATE FORMUL 3 CTP 2(C9 H16 N3 O14 P3) FORMUL 5 HOH *17(H2 O) HELIX 1 1 VAL A 7 VAL A 15 1 9 HELIX 2 2 ASP A 16 ASN A 34 1 19 HELIX 3 3 GLY A 41 GLY A 50 1 10 HELIX 4 4 ASN A 63 LEU A 75 1 13 HELIX 5 5 THR A 121 ARG A 128 1 8 HELIX 6 6 PHE A 131 ALA A 135 5 5 HELIX 7 7 ASN A 141 PHE A 145 5 5 HELIX 8 8 GLY A 153 GLU A 160 1 8 HELIX 9 9 LEU A 169 ASP A 174 1 6 HELIX 10 10 THR A 176 ASP A 189 1 14 HELIX 11 11 GLU A 193 GLU A 206 1 14 HELIX 12 12 THR A 213 GLU A 227 1 15 HELIX 13 13 PRO A 230 PHE A 240 1 11 HELIX 14 14 VAL A 242 PHE A 247 1 6 HELIX 15 15 THR A 253 GLY A 275 1 23 HELIX 16 16 ASP A 278 GLU A 289 1 12 HELIX 17 17 ASP A 292 TYR A 303 1 12 HELIX 18 18 ASN A 308 SER A 328 1 21 HELIX 19 19 GLU A 329 VAL A 331 5 3 HELIX 20 20 PRO A 332 VAL A 340 5 9 HELIX 21 21 SER A 344 ALA A 353 1 10 HELIX 22 22 GLY A 357 ASN A 372 1 16 HELIX 23 23 TYR A 382 GLY A 387 1 6 HELIX 24 24 LYS A 392 LEU A 406 1 15 HELIX 25 25 GLU A 413 LEU A 424 1 12 HELIX 26 26 VAL B 7 VAL B 15 1 9 HELIX 27 27 ASP B 16 VAL B 33 1 18 HELIX 28 28 GLY B 41 GLY B 50 1 10 HELIX 29 29 ASN B 63 ARG B 73 1 11 HELIX 30 30 VAL B 117 ARG B 128 1 12 HELIX 31 31 PHE B 131 ALA B 135 5 5 HELIX 32 32 ASN B 141 PHE B 145 5 5 HELIX 33 33 GLY B 153 GLY B 161 1 9 HELIX 34 34 LEU B 169 ASP B 174 1 6 HELIX 35 35 THR B 176 PHE B 188 1 13 HELIX 36 36 GLU B 193 GLY B 207 1 15 HELIX 37 37 GLY B 207 THR B 212 1 6 HELIX 38 38 THR B 213 GLU B 227 1 15 HELIX 39 39 ASN B 229 PHE B 240 1 12 HELIX 40 40 THR B 253 GLY B 275 1 23 HELIX 41 41 ASP B 278 LEU B 288 1 11 HELIX 42 42 ASP B 292 ASP B 301 1 10 HELIX 43 43 ASN B 308 LEU B 327 1 20 HELIX 44 44 VAL B 336 LYS B 341 1 6 HELIX 45 45 SER B 344 ALA B 353 1 10 HELIX 46 46 SER B 356 THR B 373 1 18 HELIX 47 47 LYS B 392 ASP B 407 1 16 HELIX 48 48 ASP B 412 GLU B 425 1 14 SHEET 1 A 8 PHE A 4 ASP A 6 0 SHEET 2 A 8 LEU A 147 ILE A 149 -1 O LEU A 148 N ARG A 5 SHEET 3 A 8 ALA A 137 LYS A 139 -1 N ALA A 137 O ILE A 149 SHEET 4 A 8 VAL A 37 VAL A 40 -1 N VAL A 39 O ILE A 138 SHEET 5 A 8 ILE A 56 VAL A 60 -1 O VAL A 59 N TYR A 38 SHEET 6 A 8 LEU A 96 THR A 102 1 O ALA A 101 N ILE A 58 SHEET 7 A 8 ALA A 88 LEU A 92 -1 N LEU A 92 O LEU A 96 SHEET 8 A 8 LYS A 78 VAL A 80 -1 N LYS A 78 O PHE A 91 SHEET 1 B 8 PHE B 4 ASP B 6 0 SHEET 2 B 8 LEU B 147 ILE B 149 -1 O LEU B 148 N ARG B 5 SHEET 3 B 8 ALA B 137 LYS B 139 -1 N ALA B 137 O ILE B 149 SHEET 4 B 8 VAL B 37 VAL B 40 -1 N VAL B 39 O ILE B 138 SHEET 5 B 8 ASP B 55 VAL B 60 -1 O ASP B 57 N VAL B 40 SHEET 6 B 8 LEU B 96 THR B 102 1 O ALA B 101 N VAL B 60 SHEET 7 B 8 THR B 87 LEU B 92 -1 N LEU B 90 O ILE B 98 SHEET 8 B 8 GLY B 77 HIS B 82 -1 N LYS B 78 O PHE B 91 SHEET 1 C 2 VAL B 162 ILE B 163 0 SHEET 2 C 2 ARG B 191 ILE B 192 1 O ARG B 191 N ILE B 163 SITE 1 AC1 11 ARG A 45 ARG A 129 ASP A 130 ASN A 134 SITE 2 AC1 11 ASP A 174 THR A 176 ARG A 177 ARG A 180 SITE 3 AC1 11 ARG A 183 PHE A 184 ARG A 187 SITE 1 AC2 13 GLY B 41 GLY B 42 ARG B 45 ARG B 129 SITE 2 AC2 13 ASP B 130 ASN B 134 ASP B 174 ARG B 177 SITE 3 AC2 13 ARG B 180 ARG B 183 PHE B 184 ARG B 187 SITE 4 AC2 13 HOH B 447 CRYST1 190.451 63.586 152.578 90.00 103.31 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005251 0.000000 0.001242 0.00000 SCALE2 0.000000 0.015727 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006735 0.00000