HEADER MEMBRANE PROTEIN 16-APR-09 3H3G TITLE CRYSTAL STRUCTURE OF THE EXTRACELLULAR DOMAIN OF THE HUMAN PARATHYROID TITLE 2 HORMONE RECEPTOR (PTH1R) IN COMPLEX WITH PARATHYROID HORMONE-RELATED TITLE 3 PROTEIN (PTHRP) COMPND MOL_ID: 1; COMPND 2 MOLECULE: FUSION PROTEIN OF MALTOSE-BINDING PERIPLASMIC DOMAIN AND COMPND 3 HUMAN PARATHYROID HORMONE RECEPTOR EXTRACELLULAR DOMAIN; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: EXTRACELLULAR DOMAIN; COMPND 6 SYNONYM: MALTODEXTRIN-BINDING PROTEIN, MMBP, PTH/PTHR RECEPTOR, COMPND 7 PTH/PTHRP TYPE I RECEPTOR; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: PARATHYROID HORMONE-RELATED PROTEIN; COMPND 11 CHAIN: B; COMPND 12 FRAGMENT: RESIDUES 12-34; COMPND 13 SYNONYM: PTH-RP, PTHRP, PLP, OSTEOSTATIN; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI, HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 562, 9606; SOURCE 4 GENE: B4034, JW3994, MALE, PTHR1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES KEYWDS GPCR, EXTRACELLULAR DOMAIN, PTHRP, PTH, PTHR1, SUGAR TRANSPORT, KEYWDS 2 TRANSPORT, HORMONE, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.A.PIOSZAK,H.E.XU REVDAT 8 06-SEP-23 3H3G 1 HETSYN REVDAT 7 29-JUL-20 3H3G 1 COMPND REMARK SEQADV HET REVDAT 7 2 1 HETNAM FORMUL LINK SITE REVDAT 7 3 1 ATOM REVDAT 6 01-NOV-17 3H3G 1 REMARK REVDAT 5 02-AUG-17 3H3G 1 SOURCE REMARK REVDAT 4 13-JUL-11 3H3G 1 VERSN REVDAT 3 20-OCT-09 3H3G 1 JRNL REVDAT 2 25-AUG-09 3H3G 1 JRNL REVDAT 1 11-AUG-09 3H3G 0 JRNL AUTH A.A.PIOSZAK,N.R.PARKER,T.J.GARDELLA,H.E.XU JRNL TITL STRUCTURAL BASIS FOR PARATHYROID HORMONE-RELATED PROTEIN JRNL TITL 2 BINDING TO THE PARATHYROID HORMONE RECEPTOR AND DESIGN OF JRNL TITL 3 CONFORMATION-SELECTIVE PEPTIDES. JRNL REF J.BIOL.CHEM. V. 284 28382 2009 JRNL REFN ISSN 0021-9258 JRNL PMID 19674967 JRNL DOI 10.1074/JBC.M109.022905 REMARK 2 REMARK 2 RESOLUTION. 1.94 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.94 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.6 REMARK 3 NUMBER OF REFLECTIONS : 40693 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2065 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.94 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.99 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1654 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 54.19 REMARK 3 BIN R VALUE (WORKING SET) : 0.2620 REMARK 3 BIN FREE R VALUE SET COUNT : 87 REMARK 3 BIN FREE R VALUE : 0.3230 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3889 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 23 REMARK 3 SOLVENT ATOMS : 237 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.98 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.48000 REMARK 3 B22 (A**2) : 1.48000 REMARK 3 B33 (A**2) : -2.95000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.170 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.155 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.125 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.784 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4016 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5452 ; 1.264 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 489 ; 5.664 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 184 ;32.870 ;24.728 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 663 ;16.060 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;18.828 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 588 ; 0.091 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3059 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1805 ; 0.198 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2723 ; 0.306 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 255 ; 0.149 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 59 ; 0.212 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 13 ; 0.228 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2529 ; 0.713 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3934 ; 1.097 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1731 ; 1.855 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1518 ; 2.858 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -344 A 26 REMARK 3 RESIDUE RANGE : A 194 A 194 REMARK 3 ORIGIN FOR THE GROUP (A): 32.8866 -1.8562 -20.4937 REMARK 3 T TENSOR REMARK 3 T11: -0.1622 T22: -0.1217 REMARK 3 T33: -0.2136 T12: 0.0221 REMARK 3 T13: -0.0591 T23: -0.0155 REMARK 3 L TENSOR REMARK 3 L11: 1.6121 L22: 1.5924 REMARK 3 L33: 2.4972 L12: 0.5824 REMARK 3 L13: -1.0510 L23: -1.1657 REMARK 3 S TENSOR REMARK 3 S11: -0.0236 S12: 0.0930 S13: 0.0149 REMARK 3 S21: 0.0901 S22: 0.0290 S23: -0.0224 REMARK 3 S31: -0.1442 S32: -0.1058 S33: -0.0055 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 31 A 175 REMARK 3 RESIDUE RANGE : B 13 B 35 REMARK 3 ORIGIN FOR THE GROUP (A): 39.0258 -27.7314 -58.2677 REMARK 3 T TENSOR REMARK 3 T11: -0.1159 T22: -0.0253 REMARK 3 T33: -0.0063 T12: -0.0965 REMARK 3 T13: -0.0253 T23: 0.1466 REMARK 3 L TENSOR REMARK 3 L11: 6.5769 L22: 2.8771 REMARK 3 L33: 9.0959 L12: 1.1465 REMARK 3 L13: 3.8690 L23: -0.3609 REMARK 3 S TENSOR REMARK 3 S11: 0.3881 S12: -0.6622 S13: -0.5537 REMARK 3 S21: 0.1994 S22: -0.3967 S23: -0.3820 REMARK 3 S31: 0.2073 S32: -0.0523 S33: 0.0085 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3H3G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-APR-09. REMARK 100 THE DEPOSITION ID IS D_1000052643. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9785 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40884 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.940 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.2 REMARK 200 DATA REDUNDANCY : 17.00 REMARK 200 R MERGE (I) : 0.09100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 29.6600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.94 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.01 REMARK 200 COMPLETENESS FOR SHELL (%) : 55.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.50 REMARK 200 R MERGE FOR SHELL (I) : 0.44300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.250 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3C4M REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 7.5% PEG 2000, 13% PEG 400, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 298K, PH 7.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 82.22750 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 42.02050 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 42.02050 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 41.11375 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 42.02050 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 42.02050 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 123.34125 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 42.02050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 42.02050 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 41.11375 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 42.02050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 42.02050 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 123.34125 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 82.22750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2610 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -345 REMARK 465 GLU A 27 REMARK 465 PHE A 28 REMARK 465 ASP A 29 REMARK 465 ASP A 30 REMARK 465 GLN A 57 REMARK 465 ARG A 58 REMARK 465 PRO A 59 REMARK 465 ALA A 60 REMARK 465 SER A 61 REMARK 465 ILE A 62 REMARK 465 MET A 63 REMARK 465 GLU A 64 REMARK 465 SER A 65 REMARK 465 ASP A 66 REMARK 465 LYS A 67 REMARK 465 GLY A 68 REMARK 465 TRP A 69 REMARK 465 THR A 70 REMARK 465 SER A 71 REMARK 465 ALA A 72 REMARK 465 SER A 73 REMARK 465 THR A 74 REMARK 465 SER A 75 REMARK 465 GLY A 76 REMARK 465 LYS A 77 REMARK 465 PRO A 78 REMARK 465 ARG A 79 REMARK 465 LYS A 80 REMARK 465 ASP A 81 REMARK 465 LYS A 82 REMARK 465 ALA A 83 REMARK 465 SER A 84 REMARK 465 GLY A 85 REMARK 465 LYS A 86 REMARK 465 LEU A 87 REMARK 465 TYR A 88 REMARK 465 PRO A 89 REMARK 465 GLU A 90 REMARK 465 SER A 91 REMARK 465 GLU A 92 REMARK 465 GLU A 93 REMARK 465 ASP A 94 REMARK 465 LYS A 95 REMARK 465 GLU A 96 REMARK 465 ALA A 97 REMARK 465 PRO A 98 REMARK 465 THR A 99 REMARK 465 GLY A 100 REMARK 465 SER A 101 REMARK 465 ASN A 176 REMARK 465 GLU A 177 REMARK 465 THR A 178 REMARK 465 ARG A 179 REMARK 465 GLU A 180 REMARK 465 ARG A 181 REMARK 465 GLU A 182 REMARK 465 VAL A 183 REMARK 465 PHE A 184 REMARK 465 ASP A 185 REMARK 465 ARG A 186 REMARK 465 LEU A 187 REMARK 465 HIS A 188 REMARK 465 HIS A 189 REMARK 465 HIS A 190 REMARK 465 HIS A 191 REMARK 465 HIS A 192 REMARK 465 HIS A 193 REMARK 465 GLY B 12 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS B 13 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A -303 O HOH A 224 1.87 REMARK 500 OE2 GLU A -16 O HOH A 381 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 223 O HOH A 233 3545 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG B 19 NE ARG B 19 CZ 0.206 REMARK 500 ARG B 19 CZ ARG B 19 NH1 0.090 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 19 NE - CZ - NH2 ANGL. DEV. = -4.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A-264 54.57 -117.84 REMARK 500 ALA A-176 -81.82 -82.23 REMARK 500 ASN A-171 113.67 -31.73 REMARK 500 HIS A 114 -5.65 85.46 REMARK 500 ILE A 115 -46.71 -130.69 REMARK 500 PHE A 173 30.62 -98.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3C4M RELATED DB: PDB REMARK 900 PTH1R ECD BOUND TO PTH DBREF 3H3G A -344 22 UNP P0AEX9 MALE_ECOLI 26 392 DBREF 3H3G A 29 187 UNP Q03431 PTH1R_HUMAN 29 187 DBREF 3H3G B 12 34 UNP P12272 PTHR_HUMAN 48 70 SEQADV 3H3G MET A -345 UNP P0AEX9 INITIATING METHIONINE SEQADV 3H3G ASN A 23 UNP P0AEX9 LINKER SEQADV 3H3G ALA A 24 UNP P0AEX9 LINKER SEQADV 3H3G ALA A 25 UNP P0AEX9 LINKER SEQADV 3H3G ALA A 26 UNP P0AEX9 LINKER SEQADV 3H3G GLU A 27 UNP P0AEX9 LINKER SEQADV 3H3G PHE A 28 UNP P0AEX9 LINKER SEQADV 3H3G HIS A 188 UNP Q03431 EXPRESSION TAG SEQADV 3H3G HIS A 189 UNP Q03431 EXPRESSION TAG SEQADV 3H3G HIS A 190 UNP Q03431 EXPRESSION TAG SEQADV 3H3G HIS A 191 UNP Q03431 EXPRESSION TAG SEQADV 3H3G HIS A 192 UNP Q03431 EXPRESSION TAG SEQADV 3H3G HIS A 193 UNP Q03431 EXPRESSION TAG SEQADV 3H3G NH2 B 35 UNP P12272 AMIDATION SEQRES 1 A 539 MET ALA LYS ILE GLU GLU GLY LYS LEU VAL ILE TRP ILE SEQRES 2 A 539 ASN GLY ASP LYS GLY TYR ASN GLY LEU ALA GLU VAL GLY SEQRES 3 A 539 LYS LYS PHE GLU LYS ASP THR GLY ILE LYS VAL THR VAL SEQRES 4 A 539 GLU HIS PRO ASP LYS LEU GLU GLU LYS PHE PRO GLN VAL SEQRES 5 A 539 ALA ALA THR GLY ASP GLY PRO ASP ILE ILE PHE TRP ALA SEQRES 6 A 539 HIS ASP ARG PHE GLY GLY TYR ALA GLN SER GLY LEU LEU SEQRES 7 A 539 ALA GLU ILE THR PRO ASP LYS ALA PHE GLN ASP LYS LEU SEQRES 8 A 539 TYR PRO PHE THR TRP ASP ALA VAL ARG TYR ASN GLY LYS SEQRES 9 A 539 LEU ILE ALA TYR PRO ILE ALA VAL GLU ALA LEU SER LEU SEQRES 10 A 539 ILE TYR ASN LYS ASP LEU LEU PRO ASN PRO PRO LYS THR SEQRES 11 A 539 TRP GLU GLU ILE PRO ALA LEU ASP LYS GLU LEU LYS ALA SEQRES 12 A 539 LYS GLY LYS SER ALA LEU MET PHE ASN LEU GLN GLU PRO SEQRES 13 A 539 TYR PHE THR TRP PRO LEU ILE ALA ALA ASP GLY GLY TYR SEQRES 14 A 539 ALA PHE LYS TYR GLU ASN GLY LYS TYR ASP ILE LYS ASP SEQRES 15 A 539 VAL GLY VAL ASP ASN ALA GLY ALA LYS ALA GLY LEU THR SEQRES 16 A 539 PHE LEU VAL ASP LEU ILE LYS ASN LYS HIS MET ASN ALA SEQRES 17 A 539 ASP THR ASP TYR SER ILE ALA GLU ALA ALA PHE ASN LYS SEQRES 18 A 539 GLY GLU THR ALA MET THR ILE ASN GLY PRO TRP ALA TRP SEQRES 19 A 539 SER ASN ILE ASP THR SER LYS VAL ASN TYR GLY VAL THR SEQRES 20 A 539 VAL LEU PRO THR PHE LYS GLY GLN PRO SER LYS PRO PHE SEQRES 21 A 539 VAL GLY VAL LEU SER ALA GLY ILE ASN ALA ALA SER PRO SEQRES 22 A 539 ASN LYS GLU LEU ALA LYS GLU PHE LEU GLU ASN TYR LEU SEQRES 23 A 539 LEU THR ASP GLU GLY LEU GLU ALA VAL ASN LYS ASP LYS SEQRES 24 A 539 PRO LEU GLY ALA VAL ALA LEU LYS SER TYR GLU GLU GLU SEQRES 25 A 539 LEU ALA LYS ASP PRO ARG ILE ALA ALA THR MET GLU ASN SEQRES 26 A 539 ALA GLN LYS GLY GLU ILE MET PRO ASN ILE PRO GLN MET SEQRES 27 A 539 SER ALA PHE TRP TYR ALA VAL ARG THR ALA VAL ILE ASN SEQRES 28 A 539 ALA ALA SER GLY ARG GLN THR VAL ASP GLU ALA LEU LYS SEQRES 29 A 539 ASP ALA GLN THR ASN ALA ALA ALA GLU PHE ASP ASP VAL SEQRES 30 A 539 MET THR LYS GLU GLU GLN ILE PHE LEU LEU HIS ARG ALA SEQRES 31 A 539 GLN ALA GLN CYS GLU LYS ARG LEU LYS GLU VAL LEU GLN SEQRES 32 A 539 ARG PRO ALA SER ILE MET GLU SER ASP LYS GLY TRP THR SEQRES 33 A 539 SER ALA SER THR SER GLY LYS PRO ARG LYS ASP LYS ALA SEQRES 34 A 539 SER GLY LYS LEU TYR PRO GLU SER GLU GLU ASP LYS GLU SEQRES 35 A 539 ALA PRO THR GLY SER ARG TYR ARG GLY ARG PRO CYS LEU SEQRES 36 A 539 PRO GLU TRP ASP HIS ILE LEU CYS TRP PRO LEU GLY ALA SEQRES 37 A 539 PRO GLY GLU VAL VAL ALA VAL PRO CYS PRO ASP TYR ILE SEQRES 38 A 539 TYR ASP PHE ASN HIS LYS GLY HIS ALA TYR ARG ARG CYS SEQRES 39 A 539 ASP ARG ASN GLY SER TRP GLU LEU VAL PRO GLY HIS ASN SEQRES 40 A 539 ARG THR TRP ALA ASN TYR SER GLU CYS VAL LYS PHE LEU SEQRES 41 A 539 THR ASN GLU THR ARG GLU ARG GLU VAL PHE ASP ARG LEU SEQRES 42 A 539 HIS HIS HIS HIS HIS HIS SEQRES 1 B 24 GLY LYS SER ILE GLN ASP LEU ARG ARG ARG PHE PHE LEU SEQRES 2 B 24 HIS HIS LEU ILE ALA GLU ILE HIS THR ALA NH2 HET NH2 B 35 1 HET GLC C 1 12 HET GLC C 2 11 HETNAM NH2 AMINO GROUP HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE FORMUL 2 NH2 H2 N FORMUL 3 GLC 2(C6 H12 O6) FORMUL 4 HOH *237(H2 O) HELIX 1 1 GLY A -328 GLY A -312 1 17 HELIX 2 2 LYS A -302 ALA A -293 1 10 HELIX 3 3 ARG A -278 SER A -271 1 8 HELIX 4 4 ASP A -262 ASP A -257 1 6 HELIX 5 5 TYR A -254 VAL A -247 1 8 HELIX 6 6 THR A -216 GLU A -214 5 3 HELIX 7 7 GLU A -213 ALA A -203 1 11 HELIX 8 8 GLU A -191 ASP A -180 1 12 HELIX 9 9 ASN A -159 ASN A -143 1 17 HELIX 10 10 ASP A -135 LYS A -125 1 11 HELIX 11 11 GLY A -116 TRP A -114 5 3 HELIX 12 12 ALA A -113 LYS A -105 1 9 HELIX 13 13 ASN A -72 TYR A -61 1 12 HELIX 14 14 THR A -58 LYS A -47 1 12 HELIX 15 15 LEU A -40 ALA A -32 1 9 HELIX 16 16 ASP A -30 GLY A -17 1 14 HELIX 17 17 GLN A -9 SER A 8 1 18 HELIX 18 18 THR A 12 ALA A 25 1 14 HELIX 19 19 THR A 33 LEU A 56 1 24 HELIX 20 20 SER B 14 HIS B 32 1 19 SHEET 1 A 6 VAL A-309 GLU A-306 0 SHEET 2 A 6 LEU A-337 TRP A-334 1 N ILE A-335 O GLU A-306 SHEET 3 A 6 ILE A-285 ALA A-281 1 O ILE A-285 N TRP A-334 SHEET 4 A 6 PHE A -86 ILE A -78 -1 O SER A -81 N TRP A-282 SHEET 5 A 6 TYR A-238 GLU A-233 -1 N ILE A-236 O LEU A -82 SHEET 6 A 6 ALA A -43 VAL A -42 -1 O ALA A -43 N VAL A-234 SHEET 1 B 5 VAL A-309 GLU A-306 0 SHEET 2 B 5 LEU A-337 TRP A-334 1 N ILE A-335 O GLU A-306 SHEET 3 B 5 ILE A-285 ALA A-281 1 O ILE A-285 N TRP A-334 SHEET 4 B 5 PHE A -86 ILE A -78 -1 O SER A -81 N TRP A-282 SHEET 5 B 5 GLU A -16 ILE A -15 1 O GLU A -16 N VAL A -85 SHEET 1 C 2 ARG A-246 TYR A-245 0 SHEET 2 C 2 LYS A-242 LEU A-241 -1 O LYS A-242 N TYR A-245 SHEET 1 D 4 SER A-199 LEU A-197 0 SHEET 2 D 4 THR A-122 ASN A-117 1 O ALA A-121 N SER A-199 SHEET 3 D 4 SER A-230 ASN A-226 -1 N ASN A-226 O ALA A-121 SHEET 4 D 4 TYR A-102 THR A -99 -1 O THR A -99 N LEU A-229 SHEET 1 E 2 TYR A-177 GLU A-172 0 SHEET 2 E 2 LYS A-169 GLY A-162 -1 O LYS A-169 N GLU A-172 SHEET 1 F 2 GLU A 111 TRP A 112 0 SHEET 2 F 2 CYS A 117 TRP A 118 -1 O TRP A 118 N GLU A 111 SHEET 1 G 2 VAL A 126 PRO A 130 0 SHEET 2 G 2 HIS A 143 ARG A 147 -1 O ALA A 144 N VAL A 129 SSBOND 1 CYS A 48 CYS A 117 1555 1555 2.09 SSBOND 2 CYS A 108 CYS A 148 1555 1555 2.05 SSBOND 3 CYS A 131 CYS A 170 1555 1555 2.05 LINK C ALA B 34 N NH2 B 35 1555 1555 1.33 LINK O4 GLC C 1 C1 GLC C 2 1555 1555 1.42 CRYST1 84.041 84.041 164.455 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011899 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011899 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006081 0.00000