data_3H4A # _entry.id 3H4A # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3H4A RCSB RCSB052673 WWPDB D_1000052673 # loop_ _pdbx_database_PDB_obs_spr.id _pdbx_database_PDB_obs_spr.date _pdbx_database_PDB_obs_spr.pdb_id _pdbx_database_PDB_obs_spr.replace_pdb_id _pdbx_database_PDB_obs_spr.details SPRSDE 2009-04-28 3H4A 1F9Y ? OBSLTE 2009-10-27 3IP0 3H4A ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1Q0N _pdbx_database_related.details 'Crystal structure of E. coli HPPK complexed with MgAMPCPP and 6-hydroxymethyl-7,8-dihydropterin' _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3H4A _pdbx_database_status.status_code OBS _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-04-18 _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Blaszczyk, J.' 1 'Ji, X.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Dynamic roles of arginine residues 82 and 92 of Escherichia coli 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase: crystallographic studies. ; Biochemistry 42 1573 1580 2003 BICHAW US 0006-2960 0033 ? 12578370 10.1021/bi0267994 1 'Catalytic center assembly of HPPK as revealed by the crystal structure of a ternary complex at 1.25 A resolution.' Structure 8 1049 1058 2000 STRUE6 UK 0969-2126 2005 ? 11080626 ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Blaszczyk, J.' 1 primary 'Li, Y.' 2 primary 'Shi, G.' 3 primary 'Yan, H.' 4 primary 'Ji, X.' 5 1 'Blaszczyk, J.' 6 1 'Shi, G.' 7 1 'Yan, H.' 8 1 'Ji, X.' 9 # _cell.length_a 73.47 _cell.length_b 37.91 _cell.length_c 57.85 _cell.angle_alpha 90.00 _cell.angle_beta 117.18 _cell.angle_gamma 90.00 _cell.entry_id 3H4A _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.entry_id 3H4A _symmetry.Int_Tables_number 5 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase' 17966.535 1 2.7.6.3 ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 3 non-polymer syn 'DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER' 505.208 1 ? ? ? ? 4 non-polymer syn 6-HYDROXYMETHYLPTERIN 193.163 1 ? ? ? ? 5 non-polymer syn 6-CARBOXYPTERIN 207.146 1 ? ? ? ? 6 non-polymer syn 'CHLORIDE ION' 35.453 3 ? ? ? ? 7 non-polymer syn 'ACETATE ION' 59.044 4 ? ? ? ? 8 water nat water 18.015 326 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name '7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK, 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, PPPK' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;TVAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQ GRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNKW ; _entity_poly.pdbx_seq_one_letter_code_can ;TVAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQ GRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNKW ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 VAL n 1 3 ALA n 1 4 TYR n 1 5 ILE n 1 6 ALA n 1 7 ILE n 1 8 GLY n 1 9 SER n 1 10 ASN n 1 11 LEU n 1 12 ALA n 1 13 SER n 1 14 PRO n 1 15 LEU n 1 16 GLU n 1 17 GLN n 1 18 VAL n 1 19 ASN n 1 20 ALA n 1 21 ALA n 1 22 LEU n 1 23 LYS n 1 24 ALA n 1 25 LEU n 1 26 GLY n 1 27 ASP n 1 28 ILE n 1 29 PRO n 1 30 GLU n 1 31 SER n 1 32 HIS n 1 33 ILE n 1 34 LEU n 1 35 THR n 1 36 VAL n 1 37 SER n 1 38 SER n 1 39 PHE n 1 40 TYR n 1 41 ARG n 1 42 THR n 1 43 PRO n 1 44 PRO n 1 45 LEU n 1 46 GLY n 1 47 PRO n 1 48 GLN n 1 49 ASP n 1 50 GLN n 1 51 PRO n 1 52 ASP n 1 53 TYR n 1 54 LEU n 1 55 ASN n 1 56 ALA n 1 57 ALA n 1 58 VAL n 1 59 ALA n 1 60 LEU n 1 61 GLU n 1 62 THR n 1 63 SER n 1 64 LEU n 1 65 ALA n 1 66 PRO n 1 67 GLU n 1 68 GLU n 1 69 LEU n 1 70 LEU n 1 71 ASN n 1 72 HIS n 1 73 THR n 1 74 GLN n 1 75 ARG n 1 76 ILE n 1 77 GLU n 1 78 LEU n 1 79 GLN n 1 80 GLN n 1 81 GLY n 1 82 ARG n 1 83 VAL n 1 84 ARG n 1 85 LYS n 1 86 ALA n 1 87 GLU n 1 88 ARG n 1 89 TRP n 1 90 GLY n 1 91 PRO n 1 92 ARG n 1 93 THR n 1 94 LEU n 1 95 ASP n 1 96 LEU n 1 97 ASP n 1 98 ILE n 1 99 MET n 1 100 LEU n 1 101 PHE n 1 102 GLY n 1 103 ASN n 1 104 GLU n 1 105 VAL n 1 106 ILE n 1 107 ASN n 1 108 THR n 1 109 GLU n 1 110 ARG n 1 111 LEU n 1 112 THR n 1 113 VAL n 1 114 PRO n 1 115 HIS n 1 116 TYR n 1 117 ASP n 1 118 MET n 1 119 LYS n 1 120 ASN n 1 121 ARG n 1 122 GLY n 1 123 PHE n 1 124 MET n 1 125 LEU n 1 126 TRP n 1 127 PRO n 1 128 LEU n 1 129 PHE n 1 130 GLU n 1 131 ILE n 1 132 ALA n 1 133 PRO n 1 134 GLU n 1 135 LEU n 1 136 VAL n 1 137 PHE n 1 138 PRO n 1 139 ASP n 1 140 GLY n 1 141 GLU n 1 142 MET n 1 143 LEU n 1 144 ARG n 1 145 GLN n 1 146 ILE n 1 147 LEU n 1 148 HIS n 1 149 THR n 1 150 ARG n 1 151 ALA n 1 152 PHE n 1 153 ASP n 1 154 LYS n 1 155 LEU n 1 156 ASN n 1 157 LYS n 1 158 TRP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'b0142, foIK, folK, JW0138' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli K-12' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83333 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET17b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code HPPK_ECOLI _struct_ref.pdbx_db_accession P26281 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TVAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQ GRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNKW ; _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3H4A _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 158 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P26281 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 159 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 158 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 APC non-polymer . 'DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER' "ALPHA,BETA-METHYLENEADENOSINE-5'-TRIPHOSPHATE" 'C11 H18 N5 O12 P3' 505.208 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HHR non-polymer . 6-HYDROXYMETHYLPTERIN ? 'C7 H7 N5 O2' 193.163 HHS non-polymer . 6-CARBOXYPTERIN '2-amino-4-oxo-3,4-dihydropteridine-6-carboxylic acid' 'C7 H5 N5 O3' 207.146 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3H4A _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 1.99 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 38.33 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.temp 292 _exptl_crystal_grow.pdbx_details 'PEG 4000, Ammonium acetate, Sodium acetate, Glycerol, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 292K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 1999-10-18 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Silicon 111' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00928 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X9B' _diffrn_source.pdbx_wavelength_list 1.00928 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X9B # _reflns.entry_id 3H4A _reflns.d_resolution_high 0.890 _reflns.d_resolution_low 40.000 _reflns.number_obs 100866 _reflns.pdbx_Rmerge_I_obs 0.043 _reflns.pdbx_netI_over_sigmaI 31.025 _reflns.pdbx_chi_squared 1.003 _reflns.percent_possible_obs 93.100 _reflns.observed_criterion_sigma_F -6.0 _reflns.observed_criterion_sigma_I -3.0 _reflns.number_all 100866 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate 7.31 _reflns.pdbx_redundancy 4.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 0.89 _reflns_shell.d_res_low 0.92 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.581 _reflns_shell.meanI_over_sigI_obs 1.7 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 1.001 _reflns_shell.pdbx_redundancy 2.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 8139 _reflns_shell.percent_possible_all 75.6 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3H4A _refine.ls_d_res_high 0.900 _refine.ls_d_res_low 23.202 _refine.pdbx_ls_sigma_F 0.07 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 90.330 _refine.ls_number_reflns_obs 94609 _refine.ls_number_reflns_all 94609 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;A total of 41 rounds of refinement were carried out, including 5 rounds with CNS, 21 rounds with SHELX-97, and 15 rounds with PHENIX (phenix.refine). ; _refine.ls_R_factor_all 0.125 _refine.ls_R_factor_obs 0.124 _refine.ls_R_factor_R_work 0.124 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.126 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 0.98 _refine.ls_number_reflns_R_free 930 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 13.127 _refine.solvent_model_param_bsol 79.887 _refine.solvent_model_param_ksol 0.441 _refine.pdbx_isotropic_thermal_model 'Anisotropic temperature factors for fully occupied non-hydrogen atoms' _refine.aniso_B[1][1] -0.253 _refine.aniso_B[2][2] 0.108 _refine.aniso_B[3][3] -0.732 _refine.aniso_B[1][2] -0.000 _refine.aniso_B[1][3] 1.096 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.070 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.110 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.900 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB ENTRY 1Q0N' _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 86.14 _refine.B_iso_min 2.99 _refine.occupancy_max 1.00 _refine.occupancy_min 0.17 _refine.pdbx_ls_sigma_I 0 _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3H4A _refine_analyze.Luzzati_coordinate_error_obs 0.07 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2845 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 123 _refine_hist.number_atoms_solvent 357 _refine_hist.number_atoms_total 3325 _refine_hist.d_res_high 0.900 _refine_hist.d_res_low 23.202 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 3034 0.007 ? ? 'X-RAY DIFFRACTION' ? f_angle_d 5538 1.029 ? ? 'X-RAY DIFFRACTION' ? f_chiral_restr 229 0.079 ? ? 'X-RAY DIFFRACTION' ? f_plane_restr 480 0.009 ? ? 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 811 13.442 ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 0.900 0.947 7 75.000 10985 . 0.220 0.235 . 104 . 11089 10985 . 'X-RAY DIFFRACTION' 0.947 1.007 7 85.000 12537 . 0.157 0.169 . 128 . 12665 12537 . 'X-RAY DIFFRACTION' 1.007 1.085 7 89.000 13103 . 0.127 0.140 . 127 . 13230 13103 . 'X-RAY DIFFRACTION' 1.085 1.194 7 92.000 13642 . 0.110 0.124 . 136 . 13778 13642 . 'X-RAY DIFFRACTION' 1.194 1.366 7 95.000 14081 . 0.106 0.110 . 140 . 14221 14081 . 'X-RAY DIFFRACTION' 1.366 1.721 7 97.000 14447 . 0.107 0.110 . 147 . 14594 14447 . 'X-RAY DIFFRACTION' 1.721 23.210 7 99.000 14884 . 0.124 0.119 . 148 . 15032 14884 . 'X-RAY DIFFRACTION' # _struct.entry_id 3H4A _struct.title 'Crystal structure of E. coli HPPK complexed with MgAMPCPP and oxidation products of 6-hydroxymethyl-7,8-dihydropterin' _struct.pdbx_descriptor '2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (E.C.2.7.6.3)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3H4A _struct_keywords.text 'alpha beta, Folate biosynthesis, Kinase, Transferase' _struct_keywords.pdbx_keywords TRANSFERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 6 ? H N N 6 ? I N N 6 ? J N N 7 ? K N N 7 ? L N N 7 ? M N N 7 ? N N N 8 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 13 ? ASP A 27 ? SER A 13 ASP A 27 1 ? 15 HELX_P HELX_P2 2 ALA A 65 ? GLN A 80 ? ALA A 65 GLN A 80 1 ? 16 HELX_P HELX_P3 3 ASP A 117 ? ASN A 120 ? ASP A 117 ASN A 120 5 ? 4 HELX_P HELX_P4 4 ARG A 121 ? ALA A 132 ? ARG A 121 ALA A 132 1 ? 12 HELX_P HELX_P5 5 MET A 142 ? ALA A 151 ? MET A 142 ALA A 151 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A ASP 95 OD1 ? ? ? 1_555 B MG . MG ? ? A ASP 95 A MG 161 1_555 ? ? ? ? ? ? ? 2.060 ? metalc2 metalc ? ? A ASP 95 OD2 ? ? ? 1_555 C MG . MG ? ? A ASP 95 A MG 162 1_555 ? ? ? ? ? ? ? 2.132 ? metalc3 metalc ? ? A ASP 97 OD1 ? ? ? 1_555 B MG . MG ? ? A ASP 97 A MG 161 1_555 ? ? ? ? ? ? ? 2.066 ? metalc4 metalc ? ? A ASP 97 OD2 ? ? ? 1_555 C MG . MG ? ? A ASP 97 A MG 162 1_555 ? ? ? ? ? ? ? 2.023 ? metalc5 metalc ? ? B MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 161 A HOH 202 1_555 ? ? ? ? ? ? ? 2.079 ? metalc6 metalc ? ? B MG . MG ? ? ? 1_555 D APC . O2A ? ? A MG 161 A APC 171 1_555 ? ? ? ? ? ? ? 2.085 ? metalc7 metalc ? ? B MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 161 A HOH 201 1_555 ? ? ? ? ? ? ? 2.089 ? metalc8 metalc ? ? B MG . MG ? ? ? 1_555 D APC . O2B ? ? A MG 161 A APC 171 1_555 ? ? ? ? ? ? ? 2.105 ? metalc9 metalc ? ? C MG . MG ? ? ? 1_555 D APC . O2B ? ? A MG 162 A APC 171 1_555 ? ? ? ? ? ? ? 2.131 ? metalc10 metalc ? ? C MG . MG ? ? ? 1_555 D APC . O1G ? ? A MG 162 A APC 171 1_555 ? ? ? ? ? ? ? 2.054 ? metalc11 metalc ? ? C MG . MG ? ? ? 1_555 E HHR . O6A A ? A MG 162 A HHR 181 1_555 ? ? ? ? ? ? ? 2.051 ? metalc12 metalc ? ? C MG . MG ? ? ? 1_555 F HHS . O6A B ? A MG 162 A HHS 182 1_555 ? ? ? ? ? ? ? 2.102 ? metalc13 metalc ? ? C MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 162 A HOH 203 1_555 ? ? ? ? ? ? ? 2.115 ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id VAL _struct_mon_prot_cis.label_seq_id 113 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id VAL _struct_mon_prot_cis.auth_seq_id 113 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 114 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 114 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -6.95 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 31 ? VAL A 36 ? SER A 31 VAL A 36 A 2 TYR A 53 ? THR A 62 ? TYR A 53 THR A 62 A 3 VAL A 2 ? SER A 9 ? VAL A 2 SER A 9 A 4 ASP A 95 ? PHE A 101 ? ASP A 95 PHE A 101 B 1 SER A 31 ? VAL A 36 ? SER A 31 VAL A 36 B 2 TYR A 53 ? THR A 62 ? TYR A 53 THR A 62 B 3 TYR A 40 ? THR A 42 ? TYR A 40 THR A 42 B 4 ASN A 156 ? LYS A 157 ? ASN A 156 LYS A 157 C 1 ILE A 106 ? ASN A 107 ? ILE A 106 ASN A 107 C 2 THR A 112 ? VAL A 113 ? THR A 112 VAL A 113 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 34 ? N LEU A 34 O ALA A 59 ? O ALA A 59 A 2 3 O LEU A 60 ? O LEU A 60 N ALA A 3 ? N ALA A 3 A 3 4 N ALA A 6 ? N ALA A 6 O ASP A 97 ? O ASP A 97 B 1 2 N LEU A 34 ? N LEU A 34 O ALA A 59 ? O ALA A 59 B 2 3 O TYR A 53 ? O TYR A 53 N THR A 42 ? N THR A 42 B 3 4 N ARG A 41 ? N ARG A 41 O ASN A 156 ? O ASN A 156 C 1 2 N ILE A 106 ? N ILE A 106 O VAL A 113 ? O VAL A 113 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE MG A 161' AC2 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE MG A 162' AC3 Software ? ? ? ? 31 'BINDING SITE FOR RESIDUE APC A 171' AC4 Software ? ? ? ? 16 'BINDING SITE FOR RESIDUE HHR A 181' AC5 Software ? ? ? ? 18 'BINDING SITE FOR RESIDUE HHS A 182' AC6 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE CL A 191' AC7 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE CL A 192' AC8 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE CL A 193' AC9 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE ACT A 194' BC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE ACT A 195' BC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ACT A 196' BC3 Software ? ? ? ? 9 'BINDING SITE FOR RESIDUE ACT A 197' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ASP A 95 ? ASP A 95 . ? 1_555 ? 2 AC1 6 ASP A 97 ? ASP A 97 . ? 1_555 ? 3 AC1 6 MG C . ? MG A 162 . ? 1_555 ? 4 AC1 6 APC D . ? APC A 171 . ? 1_555 ? 5 AC1 6 HOH N . ? HOH A 201 . ? 1_555 ? 6 AC1 6 HOH N . ? HOH A 202 . ? 1_555 ? 7 AC2 7 ASP A 95 ? ASP A 95 . ? 1_555 ? 8 AC2 7 ASP A 97 ? ASP A 97 . ? 1_555 ? 9 AC2 7 MG B . ? MG A 161 . ? 1_555 ? 10 AC2 7 APC D . ? APC A 171 . ? 1_555 ? 11 AC2 7 HHR E . ? HHR A 181 . ? 1_555 ? 12 AC2 7 HHS F . ? HHS A 182 . ? 1_555 ? 13 AC2 7 HOH N . ? HOH A 203 . ? 1_555 ? 14 AC3 31 GLN A 74 ? GLN A 74 . ? 1_555 ? 15 AC3 31 ARG A 82 ? ARG A 82 . ? 1_555 ? 16 AC3 31 ARG A 84 ? ARG A 84 . ? 1_555 ? 17 AC3 31 TRP A 89 ? TRP A 89 . ? 1_555 ? 18 AC3 31 ARG A 92 ? ARG A 92 . ? 1_555 ? 19 AC3 31 ASP A 95 ? ASP A 95 . ? 1_555 ? 20 AC3 31 ASP A 97 ? ASP A 97 . ? 1_555 ? 21 AC3 31 ILE A 98 ? ILE A 98 . ? 1_555 ? 22 AC3 31 ARG A 110 ? ARG A 110 . ? 1_555 ? 23 AC3 31 LEU A 111 ? LEU A 111 . ? 1_555 ? 24 AC3 31 THR A 112 ? THR A 112 . ? 1_555 ? 25 AC3 31 HIS A 115 ? HIS A 115 . ? 1_555 ? 26 AC3 31 TYR A 116 ? TYR A 116 . ? 1_555 ? 27 AC3 31 ARG A 121 ? ARG A 121 . ? 1_555 ? 28 AC3 31 MG B . ? MG A 161 . ? 1_555 ? 29 AC3 31 MG C . ? MG A 162 . ? 1_555 ? 30 AC3 31 HHR E . ? HHR A 181 . ? 1_555 ? 31 AC3 31 HHS F . ? HHS A 182 . ? 1_555 ? 32 AC3 31 ACT J . ? ACT A 194 . ? 1_555 ? 33 AC3 31 HOH N . ? HOH A 201 . ? 1_555 ? 34 AC3 31 HOH N . ? HOH A 202 . ? 1_555 ? 35 AC3 31 HOH N . ? HOH A 203 . ? 1_555 ? 36 AC3 31 HOH N . ? HOH A 216 . ? 1_555 ? 37 AC3 31 HOH N . ? HOH A 248 . ? 1_555 ? 38 AC3 31 HOH N . ? HOH A 264 . ? 1_555 ? 39 AC3 31 HOH N . ? HOH A 323 . ? 1_555 ? 40 AC3 31 HOH N . ? HOH A 365 . ? 1_555 ? 41 AC3 31 HOH N . ? HOH A 496 . ? 1_555 ? 42 AC3 31 HOH N . ? HOH A 499 . ? 1_555 ? 43 AC3 31 HOH N . ? HOH A 504 . ? 1_555 ? 44 AC3 31 HOH N . ? HOH A 505 . ? 1_555 ? 45 AC4 16 THR A 42 ? THR A 42 . ? 1_555 ? 46 AC4 16 PRO A 43 ? PRO A 43 . ? 1_555 ? 47 AC4 16 LEU A 45 ? LEU A 45 . ? 1_555 ? 48 AC4 16 TYR A 53 ? TYR A 53 . ? 1_555 ? 49 AC4 16 ASN A 55 ? ASN A 55 . ? 1_555 ? 50 AC4 16 TRP A 89 ? TRP A 89 . ? 1_555 ? 51 AC4 16 ARG A 92 ? ARG A 92 . ? 1_555 ? 52 AC4 16 ASP A 95 ? ASP A 95 . ? 1_555 ? 53 AC4 16 PHE A 123 ? PHE A 123 . ? 1_555 ? 54 AC4 16 MG C . ? MG A 162 . ? 1_555 ? 55 AC4 16 APC D . ? APC A 171 . ? 1_555 ? 56 AC4 16 HOH N . ? HOH A 203 . ? 1_555 ? 57 AC4 16 HOH N . ? HOH A 219 . ? 1_555 ? 58 AC4 16 HOH N . ? HOH A 243 . ? 1_555 ? 59 AC4 16 HOH N . ? HOH A 299 . ? 1_555 ? 60 AC4 16 HOH N . ? HOH A 504 . ? 1_555 ? 61 AC5 18 THR A 42 ? THR A 42 . ? 1_555 ? 62 AC5 18 PRO A 43 ? PRO A 43 . ? 1_555 ? 63 AC5 18 LEU A 45 ? LEU A 45 . ? 1_555 ? 64 AC5 18 TYR A 53 ? TYR A 53 . ? 1_555 ? 65 AC5 18 ASN A 55 ? ASN A 55 . ? 1_555 ? 66 AC5 18 TRP A 89 ? TRP A 89 . ? 1_555 ? 67 AC5 18 ARG A 92 ? ARG A 92 . ? 1_555 ? 68 AC5 18 ASP A 95 ? ASP A 95 . ? 1_555 ? 69 AC5 18 PHE A 123 ? PHE A 123 . ? 1_555 ? 70 AC5 18 MG C . ? MG A 162 . ? 1_555 ? 71 AC5 18 APC D . ? APC A 171 . ? 1_555 ? 72 AC5 18 HOH N . ? HOH A 203 . ? 1_555 ? 73 AC5 18 HOH N . ? HOH A 219 . ? 1_555 ? 74 AC5 18 HOH N . ? HOH A 243 . ? 1_555 ? 75 AC5 18 HOH N . ? HOH A 299 . ? 1_555 ? 76 AC5 18 HOH N . ? HOH A 503 . ? 1_555 ? 77 AC5 18 HOH N . ? HOH A 504 . ? 1_555 ? 78 AC5 18 HOH N . ? HOH A 511 . ? 1_555 ? 79 AC6 6 ASN A 107 ? ASN A 107 . ? 2_555 ? 80 AC6 6 LYS A 119 ? LYS A 119 . ? 1_555 ? 81 AC6 6 PHE A 137 ? PHE A 137 . ? 1_555 ? 82 AC6 6 PRO A 138 ? PRO A 138 . ? 1_555 ? 83 AC6 6 ASP A 139 ? ASP A 139 . ? 1_555 ? 84 AC6 6 HOH N . ? HOH A 284 . ? 2_555 ? 85 AC7 4 HOH N . ? HOH A 206 . ? 2_555 ? 86 AC7 4 HOH N . ? HOH A 206 . ? 1_555 ? 87 AC7 4 HOH N . ? HOH A 222 . ? 1_555 ? 88 AC7 4 HOH N . ? HOH A 222 . ? 2_555 ? 89 AC8 4 HOH N . ? HOH A 325 . ? 1_555 ? 90 AC8 4 HOH N . ? HOH A 325 . ? 2_555 ? 91 AC8 4 HOH N . ? HOH A 454 . ? 1_555 ? 92 AC8 4 HOH N . ? HOH A 454 . ? 2_555 ? 93 AC9 5 TYR A 116 ? TYR A 116 . ? 1_555 ? 94 AC9 5 APC D . ? APC A 171 . ? 1_555 ? 95 AC9 5 HOH N . ? HOH A 207 . ? 1_555 ? 96 AC9 5 HOH N . ? HOH A 347 . ? 2_555 ? 97 AC9 5 HOH N . ? HOH A 499 . ? 1_555 ? 98 BC1 5 GLU A 30 ? GLU A 30 . ? 1_555 ? 99 BC1 5 SER A 31 ? SER A 31 . ? 1_555 ? 100 BC1 5 HIS A 32 ? HIS A 32 . ? 1_555 ? 101 BC1 5 HOH N . ? HOH A 383 . ? 1_555 ? 102 BC1 5 HOH N . ? HOH A 403 . ? 1_555 ? 103 BC2 4 LYS A 154 ? LYS A 154 . ? 1_555 ? 104 BC2 4 HOH N . ? HOH A 280 . ? 1_555 ? 105 BC2 4 HOH N . ? HOH A 476 . ? 1_555 ? 106 BC2 4 HOH N . ? HOH A 512 . ? 1_555 ? 107 BC3 9 LEU A 11 ? LEU A 11 . ? 1_555 ? 108 BC3 9 PRO A 51 ? PRO A 51 . ? 1_555 ? 109 BC3 9 ALA A 65 ? ALA A 65 . ? 1_565 ? 110 BC3 9 PRO A 66 ? PRO A 66 . ? 1_565 ? 111 BC3 9 HOH N . ? HOH A 257 . ? 1_565 ? 112 BC3 9 HOH N . ? HOH A 285 . ? 1_565 ? 113 BC3 9 HOH N . ? HOH A 354 . ? 1_555 ? 114 BC3 9 HOH N . ? HOH A 370 . ? 1_555 ? 115 BC3 9 HOH N . ? HOH A 515 . ? 1_555 ? # _atom_sites.entry_id 3H4A _atom_sites.fract_transf_matrix[1][1] 0.013612 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.006990 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.026378 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019433 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL H MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 1 1 THR THR A . n A 1 2 VAL 2 2 2 VAL VAL A . n A 1 3 ALA 3 3 3 ALA ALA A . n A 1 4 TYR 4 4 4 TYR TYR A . n A 1 5 ILE 5 5 5 ILE ILE A . n A 1 6 ALA 6 6 6 ALA ALA A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 SER 9 9 9 SER SER A . n A 1 10 ASN 10 10 10 ASN ASN A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 SER 13 13 13 SER SER A . n A 1 14 PRO 14 14 14 PRO PRO A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 GLN 17 17 17 GLN GLN A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 ASN 19 19 19 ASN ASN A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 LYS 23 23 23 LYS LYS A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 ASP 27 27 27 ASP ASP A . n A 1 28 ILE 28 28 28 ILE ILE A . n A 1 29 PRO 29 29 29 PRO PRO A . n A 1 30 GLU 30 30 30 GLU GLU A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 HIS 32 32 32 HIS HIS A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 THR 35 35 35 THR THR A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 SER 37 37 37 SER SER A . n A 1 38 SER 38 38 38 SER SER A . n A 1 39 PHE 39 39 39 PHE PHE A . n A 1 40 TYR 40 40 40 TYR TYR A . n A 1 41 ARG 41 41 41 ARG ARG A . n A 1 42 THR 42 42 42 THR THR A . n A 1 43 PRO 43 43 43 PRO PRO A . n A 1 44 PRO 44 44 44 PRO PRO A . n A 1 45 LEU 45 45 45 LEU LEU A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 GLN 48 48 48 GLN GLN A . n A 1 49 ASP 49 49 49 ASP ASP A . n A 1 50 GLN 50 50 50 GLN GLN A . n A 1 51 PRO 51 51 51 PRO PRO A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 TYR 53 53 53 TYR TYR A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 ASN 55 55 55 ASN ASN A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 VAL 58 58 58 VAL VAL A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 GLU 61 61 61 GLU GLU A . n A 1 62 THR 62 62 62 THR THR A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 LEU 64 64 64 LEU LEU A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 PRO 66 66 66 PRO PRO A . n A 1 67 GLU 67 67 67 GLU GLU A . n A 1 68 GLU 68 68 68 GLU GLU A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 LEU 70 70 70 LEU LEU A . n A 1 71 ASN 71 71 71 ASN ASN A . n A 1 72 HIS 72 72 72 HIS HIS A . n A 1 73 THR 73 73 73 THR THR A . n A 1 74 GLN 74 74 74 GLN GLN A . n A 1 75 ARG 75 75 75 ARG ARG A . n A 1 76 ILE 76 76 76 ILE ILE A . n A 1 77 GLU 77 77 77 GLU GLU A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 GLN 79 79 79 GLN GLN A . n A 1 80 GLN 80 80 80 GLN GLN A . n A 1 81 GLY 81 81 81 GLY GLY A . n A 1 82 ARG 82 82 82 ARG ARG A . n A 1 83 VAL 83 83 83 VAL VAL A . n A 1 84 ARG 84 84 84 ARG ARG A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 GLU 87 87 87 GLU GLU A . n A 1 88 ARG 88 88 88 ARG ARG A . n A 1 89 TRP 89 89 89 TRP TRP A . n A 1 90 GLY 90 90 90 GLY GLY A . n A 1 91 PRO 91 91 91 PRO PRO A . n A 1 92 ARG 92 92 92 ARG ARG A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 LEU 94 94 94 LEU LEU A . n A 1 95 ASP 95 95 95 ASP ASP A . n A 1 96 LEU 96 96 96 LEU LEU A . n A 1 97 ASP 97 97 97 ASP ASP A . n A 1 98 ILE 98 98 98 ILE ILE A . n A 1 99 MET 99 99 99 MET MET A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 PHE 101 101 101 PHE PHE A . n A 1 102 GLY 102 102 102 GLY GLY A . n A 1 103 ASN 103 103 103 ASN ASN A . n A 1 104 GLU 104 104 104 GLU GLU A . n A 1 105 VAL 105 105 105 VAL VAL A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 ASN 107 107 107 ASN ASN A . n A 1 108 THR 108 108 108 THR THR A . n A 1 109 GLU 109 109 109 GLU GLU A . n A 1 110 ARG 110 110 110 ARG ARG A . n A 1 111 LEU 111 111 111 LEU LEU A . n A 1 112 THR 112 112 112 THR THR A . n A 1 113 VAL 113 113 113 VAL VAL A . n A 1 114 PRO 114 114 114 PRO PRO A . n A 1 115 HIS 115 115 115 HIS HIS A . n A 1 116 TYR 116 116 116 TYR TYR A . n A 1 117 ASP 117 117 117 ASP ASP A . n A 1 118 MET 118 118 118 MET MET A . n A 1 119 LYS 119 119 119 LYS LYS A . n A 1 120 ASN 120 120 120 ASN ASN A . n A 1 121 ARG 121 121 121 ARG ARG A . n A 1 122 GLY 122 122 122 GLY GLY A . n A 1 123 PHE 123 123 123 PHE PHE A . n A 1 124 MET 124 124 124 MET MET A . n A 1 125 LEU 125 125 125 LEU LEU A . n A 1 126 TRP 126 126 126 TRP TRP A . n A 1 127 PRO 127 127 127 PRO PRO A . n A 1 128 LEU 128 128 128 LEU LEU A . n A 1 129 PHE 129 129 129 PHE PHE A . n A 1 130 GLU 130 130 130 GLU GLU A . n A 1 131 ILE 131 131 131 ILE ILE A . n A 1 132 ALA 132 132 132 ALA ALA A . n A 1 133 PRO 133 133 133 PRO PRO A . n A 1 134 GLU 134 134 134 GLU GLU A . n A 1 135 LEU 135 135 135 LEU LEU A . n A 1 136 VAL 136 136 136 VAL VAL A . n A 1 137 PHE 137 137 137 PHE PHE A . n A 1 138 PRO 138 138 138 PRO PRO A . n A 1 139 ASP 139 139 139 ASP ASP A . n A 1 140 GLY 140 140 140 GLY GLY A . n A 1 141 GLU 141 141 141 GLU GLU A . n A 1 142 MET 142 142 142 MET MET A . n A 1 143 LEU 143 143 143 LEU LEU A . n A 1 144 ARG 144 144 144 ARG ARG A . n A 1 145 GLN 145 145 145 GLN GLN A . n A 1 146 ILE 146 146 146 ILE ILE A . n A 1 147 LEU 147 147 147 LEU LEU A . n A 1 148 HIS 148 148 148 HIS HIS A . n A 1 149 THR 149 149 149 THR THR A . n A 1 150 ARG 150 150 150 ARG ARG A . n A 1 151 ALA 151 151 151 ALA ALA A . n A 1 152 PHE 152 152 152 PHE PHE A . n A 1 153 ASP 153 153 153 ASP ASP A . n A 1 154 LYS 154 154 154 LYS LYS A . n A 1 155 LEU 155 155 155 LEU LEU A . n A 1 156 ASN 156 156 156 ASN ASN A . n A 1 157 LYS 157 157 157 LYS LYS A . n A 1 158 TRP 158 158 158 TRP TRP A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 161 161 MG MG A . C 2 MG 1 162 162 MG MG A . D 3 APC 1 171 171 APC APC A . E 4 HHR 1 181 181 HHR HHR A . F 5 HHS 1 182 182 HHS HHS A . G 6 CL 1 191 191 CL CL A . H 6 CL 1 192 192 CL CL A . I 6 CL 1 193 193 CL CL A . J 7 ACT 1 194 194 ACT ACT A . K 7 ACT 1 195 195 ACT ACT A . L 7 ACT 1 196 196 ACT ACT A . M 7 ACT 1 197 197 ACT ACT A . N 8 HOH 1 201 201 HOH HOH A . N 8 HOH 2 202 202 HOH HOH A . N 8 HOH 3 203 203 HOH HOH A . N 8 HOH 4 204 204 HOH HOH A . N 8 HOH 5 205 205 HOH HOH A . N 8 HOH 6 206 206 HOH HOH A . N 8 HOH 7 207 207 HOH HOH A . N 8 HOH 8 208 208 HOH HOH A . N 8 HOH 9 209 209 HOH HOH A . N 8 HOH 10 210 210 HOH HOH A . N 8 HOH 11 211 211 HOH HOH A . N 8 HOH 12 212 212 HOH HOH A . N 8 HOH 13 213 213 HOH HOH A . N 8 HOH 14 214 214 HOH HOH A . N 8 HOH 15 215 215 HOH HOH A . N 8 HOH 16 216 216 HOH HOH A . N 8 HOH 17 217 217 HOH HOH A . N 8 HOH 18 218 218 HOH HOH A . N 8 HOH 19 219 219 HOH HOH A . N 8 HOH 20 220 220 HOH HOH A . N 8 HOH 21 221 221 HOH HOH A . N 8 HOH 22 222 222 HOH HOH A . N 8 HOH 23 223 223 HOH HOH A . N 8 HOH 24 224 224 HOH HOH A . N 8 HOH 25 225 225 HOH HOH A . N 8 HOH 26 226 226 HOH HOH A . N 8 HOH 27 227 227 HOH HOH A . N 8 HOH 28 228 228 HOH HOH A . N 8 HOH 29 229 229 HOH HOH A . N 8 HOH 30 230 230 HOH HOH A . N 8 HOH 31 231 231 HOH HOH A . N 8 HOH 32 232 232 HOH HOH A . N 8 HOH 33 233 233 HOH HOH A . N 8 HOH 34 234 234 HOH HOH A . N 8 HOH 35 235 235 HOH HOH A . N 8 HOH 36 236 236 HOH HOH A . N 8 HOH 37 237 237 HOH HOH A . N 8 HOH 38 238 238 HOH HOH A . N 8 HOH 39 239 239 HOH HOH A . N 8 HOH 40 240 240 HOH HOH A . N 8 HOH 41 241 241 HOH HOH A . N 8 HOH 42 242 242 HOH HOH A . N 8 HOH 43 243 243 HOH HOH A . N 8 HOH 44 244 244 HOH HOH A . N 8 HOH 45 245 245 HOH HOH A . N 8 HOH 46 246 246 HOH HOH A . N 8 HOH 47 247 247 HOH HOH A . N 8 HOH 48 248 248 HOH HOH A . N 8 HOH 49 249 249 HOH HOH A . N 8 HOH 50 250 250 HOH HOH A . N 8 HOH 51 251 251 HOH HOH A . N 8 HOH 52 252 252 HOH HOH A . N 8 HOH 53 253 253 HOH HOH A . N 8 HOH 54 254 254 HOH HOH A . N 8 HOH 55 255 255 HOH HOH A . N 8 HOH 56 256 256 HOH HOH A . N 8 HOH 57 257 257 HOH HOH A . N 8 HOH 58 258 258 HOH HOH A . N 8 HOH 59 259 259 HOH HOH A . N 8 HOH 60 260 260 HOH HOH A . N 8 HOH 61 261 261 HOH HOH A . N 8 HOH 62 262 262 HOH HOH A . N 8 HOH 63 263 263 HOH HOH A . N 8 HOH 64 264 264 HOH HOH A . N 8 HOH 65 265 265 HOH HOH A . N 8 HOH 66 266 266 HOH HOH A . N 8 HOH 67 267 267 HOH HOH A . N 8 HOH 68 268 268 HOH HOH A . N 8 HOH 69 269 269 HOH HOH A . N 8 HOH 70 270 270 HOH HOH A . N 8 HOH 71 271 271 HOH HOH A . N 8 HOH 72 272 272 HOH HOH A . N 8 HOH 73 273 273 HOH HOH A . N 8 HOH 74 274 274 HOH HOH A . N 8 HOH 75 275 275 HOH HOH A . N 8 HOH 76 276 276 HOH HOH A . N 8 HOH 77 277 277 HOH HOH A . N 8 HOH 78 278 278 HOH HOH A . N 8 HOH 79 279 279 HOH HOH A . N 8 HOH 80 280 280 HOH HOH A . N 8 HOH 81 281 281 HOH HOH A . N 8 HOH 82 282 282 HOH HOH A . N 8 HOH 83 283 283 HOH HOH A . N 8 HOH 84 284 284 HOH HOH A . N 8 HOH 85 285 285 HOH HOH A . N 8 HOH 86 286 286 HOH HOH A . N 8 HOH 87 287 287 HOH HOH A . N 8 HOH 88 288 288 HOH HOH A . N 8 HOH 89 289 289 HOH HOH A . N 8 HOH 90 290 290 HOH HOH A . N 8 HOH 91 291 291 HOH HOH A . N 8 HOH 92 292 292 HOH HOH A . N 8 HOH 93 293 293 HOH HOH A . N 8 HOH 94 294 294 HOH HOH A . N 8 HOH 95 295 295 HOH HOH A . N 8 HOH 96 296 296 HOH HOH A . N 8 HOH 97 297 297 HOH HOH A . N 8 HOH 98 298 298 HOH HOH A . N 8 HOH 99 299 299 HOH HOH A . N 8 HOH 100 300 300 HOH HOH A . N 8 HOH 101 301 301 HOH HOH A . N 8 HOH 102 302 302 HOH HOH A . N 8 HOH 103 303 303 HOH HOH A . N 8 HOH 104 304 304 HOH HOH A . N 8 HOH 105 305 305 HOH HOH A . N 8 HOH 106 306 306 HOH HOH A . N 8 HOH 107 307 307 HOH HOH A . N 8 HOH 108 308 308 HOH HOH A . N 8 HOH 109 309 309 HOH HOH A . N 8 HOH 110 310 310 HOH HOH A . N 8 HOH 111 311 311 HOH HOH A . N 8 HOH 112 312 312 HOH HOH A . N 8 HOH 113 313 313 HOH HOH A . N 8 HOH 114 314 314 HOH HOH A . N 8 HOH 115 315 315 HOH HOH A . N 8 HOH 116 316 316 HOH HOH A . N 8 HOH 117 317 317 HOH HOH A . N 8 HOH 118 318 318 HOH HOH A . N 8 HOH 119 319 319 HOH HOH A . N 8 HOH 120 320 320 HOH HOH A . N 8 HOH 121 321 321 HOH HOH A . N 8 HOH 122 322 322 HOH HOH A . N 8 HOH 123 323 323 HOH HOH A . N 8 HOH 124 324 324 HOH HOH A . N 8 HOH 125 325 325 HOH HOH A . N 8 HOH 126 326 326 HOH HOH A . N 8 HOH 127 327 327 HOH HOH A . N 8 HOH 128 328 328 HOH HOH A . N 8 HOH 129 329 329 HOH HOH A . N 8 HOH 130 330 330 HOH HOH A . N 8 HOH 131 331 331 HOH HOH A . N 8 HOH 132 332 332 HOH HOH A . N 8 HOH 133 333 333 HOH HOH A . N 8 HOH 134 334 334 HOH HOH A . N 8 HOH 135 335 335 HOH HOH A . N 8 HOH 136 336 336 HOH HOH A . N 8 HOH 137 337 337 HOH HOH A . N 8 HOH 138 338 338 HOH HOH A . N 8 HOH 139 339 339 HOH HOH A . N 8 HOH 140 340 340 HOH HOH A . N 8 HOH 141 341 341 HOH HOH A . N 8 HOH 142 342 342 HOH HOH A . N 8 HOH 143 343 343 HOH HOH A . N 8 HOH 144 344 344 HOH HOH A . N 8 HOH 145 345 345 HOH HOH A . N 8 HOH 146 346 346 HOH HOH A . N 8 HOH 147 347 347 HOH HOH A . N 8 HOH 148 348 348 HOH HOH A . N 8 HOH 149 349 349 HOH HOH A . N 8 HOH 150 350 350 HOH HOH A . N 8 HOH 151 351 351 HOH HOH A . N 8 HOH 152 352 352 HOH HOH A . N 8 HOH 153 353 353 HOH HOH A . N 8 HOH 154 354 354 HOH HOH A . N 8 HOH 155 355 355 HOH HOH A . N 8 HOH 156 356 356 HOH HOH A . N 8 HOH 157 357 357 HOH HOH A . N 8 HOH 158 358 358 HOH HOH A . N 8 HOH 159 359 359 HOH HOH A . N 8 HOH 160 360 360 HOH HOH A . N 8 HOH 161 361 361 HOH HOH A . N 8 HOH 162 362 362 HOH HOH A . N 8 HOH 163 363 363 HOH HOH A . N 8 HOH 164 364 364 HOH HOH A . N 8 HOH 165 365 365 HOH HOH A . N 8 HOH 166 366 366 HOH HOH A . N 8 HOH 167 367 367 HOH HOH A . N 8 HOH 168 368 368 HOH HOH A . N 8 HOH 169 369 369 HOH HOH A . N 8 HOH 170 370 370 HOH HOH A . N 8 HOH 171 371 371 HOH HOH A . N 8 HOH 172 372 372 HOH HOH A . N 8 HOH 173 373 373 HOH HOH A . N 8 HOH 174 374 374 HOH HOH A . N 8 HOH 175 375 375 HOH HOH A . N 8 HOH 176 376 376 HOH HOH A . N 8 HOH 177 377 377 HOH HOH A . N 8 HOH 178 378 378 HOH HOH A . N 8 HOH 179 379 379 HOH HOH A . N 8 HOH 180 380 380 HOH HOH A . N 8 HOH 181 381 381 HOH HOH A . N 8 HOH 182 382 382 HOH HOH A . N 8 HOH 183 383 383 HOH HOH A . N 8 HOH 184 384 384 HOH HOH A . N 8 HOH 185 385 385 HOH HOH A . N 8 HOH 186 386 386 HOH HOH A . N 8 HOH 187 387 387 HOH HOH A . N 8 HOH 188 388 388 HOH HOH A . N 8 HOH 189 389 389 HOH HOH A . N 8 HOH 190 390 390 HOH HOH A . N 8 HOH 191 391 391 HOH HOH A . N 8 HOH 192 392 392 HOH HOH A . N 8 HOH 193 393 393 HOH HOH A . N 8 HOH 194 394 394 HOH HOH A . N 8 HOH 195 395 395 HOH HOH A . N 8 HOH 196 396 396 HOH HOH A . N 8 HOH 197 397 397 HOH HOH A . N 8 HOH 198 398 398 HOH HOH A . N 8 HOH 199 399 399 HOH HOH A . N 8 HOH 200 400 400 HOH HOH A . N 8 HOH 201 401 401 HOH HOH A . N 8 HOH 202 402 402 HOH HOH A . N 8 HOH 203 403 403 HOH HOH A . N 8 HOH 204 404 404 HOH HOH A . N 8 HOH 205 405 405 HOH HOH A . N 8 HOH 206 406 406 HOH HOH A . N 8 HOH 207 407 407 HOH HOH A . N 8 HOH 208 408 408 HOH HOH A . N 8 HOH 209 409 409 HOH HOH A . N 8 HOH 210 410 410 HOH HOH A . N 8 HOH 211 411 411 HOH HOH A . N 8 HOH 212 412 412 HOH HOH A . N 8 HOH 213 413 413 HOH HOH A . N 8 HOH 214 414 414 HOH HOH A . N 8 HOH 215 415 415 HOH HOH A . N 8 HOH 216 416 416 HOH HOH A . N 8 HOH 217 417 417 HOH HOH A . N 8 HOH 218 418 418 HOH HOH A . N 8 HOH 219 419 419 HOH HOH A . N 8 HOH 220 420 420 HOH HOH A . N 8 HOH 221 421 421 HOH HOH A . N 8 HOH 222 422 422 HOH HOH A . N 8 HOH 223 423 423 HOH HOH A . N 8 HOH 224 424 424 HOH HOH A . N 8 HOH 225 425 425 HOH HOH A . N 8 HOH 226 426 426 HOH HOH A . N 8 HOH 227 427 427 HOH HOH A . N 8 HOH 228 428 428 HOH HOH A . N 8 HOH 229 429 429 HOH HOH A . N 8 HOH 230 430 430 HOH HOH A . N 8 HOH 231 431 431 HOH HOH A . N 8 HOH 232 432 432 HOH HOH A . N 8 HOH 233 433 433 HOH HOH A . N 8 HOH 234 434 434 HOH HOH A . N 8 HOH 235 435 435 HOH HOH A . N 8 HOH 236 436 436 HOH HOH A . N 8 HOH 237 437 437 HOH HOH A . N 8 HOH 238 438 438 HOH HOH A . N 8 HOH 239 439 439 HOH HOH A . N 8 HOH 240 440 440 HOH HOH A . N 8 HOH 241 441 441 HOH HOH A . N 8 HOH 242 442 442 HOH HOH A . N 8 HOH 243 443 443 HOH HOH A . N 8 HOH 244 444 444 HOH HOH A . N 8 HOH 245 445 445 HOH HOH A . N 8 HOH 246 446 446 HOH HOH A . N 8 HOH 247 447 447 HOH HOH A . N 8 HOH 248 448 448 HOH HOH A . N 8 HOH 249 449 449 HOH HOH A . N 8 HOH 250 450 450 HOH HOH A . N 8 HOH 251 451 451 HOH HOH A . N 8 HOH 252 452 452 HOH HOH A . N 8 HOH 253 453 453 HOH HOH A . N 8 HOH 254 454 454 HOH HOH A . N 8 HOH 255 455 455 HOH HOH A . N 8 HOH 256 456 456 HOH HOH A . N 8 HOH 257 457 457 HOH HOH A . N 8 HOH 258 458 458 HOH HOH A . N 8 HOH 259 459 459 HOH HOH A . N 8 HOH 260 460 460 HOH HOH A . N 8 HOH 261 461 461 HOH HOH A . N 8 HOH 262 462 462 HOH HOH A . N 8 HOH 263 463 463 HOH HOH A . N 8 HOH 264 464 464 HOH HOH A . N 8 HOH 265 465 465 HOH HOH A . N 8 HOH 266 466 466 HOH HOH A . N 8 HOH 267 467 467 HOH HOH A . N 8 HOH 268 468 468 HOH HOH A . N 8 HOH 269 469 469 HOH HOH A . N 8 HOH 270 470 470 HOH HOH A . N 8 HOH 271 471 471 HOH HOH A . N 8 HOH 272 472 472 HOH HOH A . N 8 HOH 273 473 473 HOH HOH A . N 8 HOH 274 474 474 HOH HOH A . N 8 HOH 275 475 475 HOH HOH A . N 8 HOH 276 476 476 HOH HOH A . N 8 HOH 277 477 477 HOH HOH A . N 8 HOH 278 478 478 HOH HOH A . N 8 HOH 279 479 479 HOH HOH A . N 8 HOH 280 480 480 HOH HOH A . N 8 HOH 281 481 481 HOH HOH A . N 8 HOH 282 482 482 HOH HOH A . N 8 HOH 283 483 483 HOH HOH A . N 8 HOH 284 484 484 HOH HOH A . N 8 HOH 285 485 485 HOH HOH A . N 8 HOH 286 486 486 HOH HOH A . N 8 HOH 287 487 487 HOH HOH A . N 8 HOH 288 488 488 HOH HOH A . N 8 HOH 289 489 489 HOH HOH A . N 8 HOH 290 490 490 HOH HOH A . N 8 HOH 291 491 491 HOH HOH A . N 8 HOH 292 492 492 HOH HOH A . N 8 HOH 293 493 493 HOH HOH A . N 8 HOH 294 494 494 HOH HOH A . N 8 HOH 295 495 495 HOH HOH A . N 8 HOH 296 496 496 HOH HOH A . N 8 HOH 297 497 497 HOH HOH A . N 8 HOH 298 498 498 HOH HOH A . N 8 HOH 299 499 499 HOH HOH A . N 8 HOH 300 500 500 HOH HOH A . N 8 HOH 301 501 501 HOH HOH A . N 8 HOH 302 502 502 HOH HOH A . N 8 HOH 303 503 503 HOH HOH A . N 8 HOH 304 504 504 HOH HOH A . N 8 HOH 305 505 505 HOH HOH A . N 8 HOH 306 506 506 HOH HOH A . N 8 HOH 307 507 507 HOH HOH A . N 8 HOH 308 508 508 HOH HOH A . N 8 HOH 309 509 509 HOH HOH A . N 8 HOH 310 510 510 HOH HOH A . N 8 HOH 311 511 511 HOH HOH A . N 8 HOH 312 512 512 HOH HOH A . N 8 HOH 313 513 513 HOH HOH A . N 8 HOH 314 514 514 HOH HOH A . N 8 HOH 315 515 515 HOH HOH A . N 8 HOH 316 516 516 HOH HOH A . N 8 HOH 317 517 517 HOH HOH A . N 8 HOH 318 518 518 HOH HOH A . N 8 HOH 319 519 519 HOH HOH A . N 8 HOH 320 520 520 HOH HOH A . N 8 HOH 321 521 521 HOH HOH A . N 8 HOH 322 522 522 HOH HOH A . N 8 HOH 323 523 523 HOH HOH A . N 8 HOH 324 524 524 HOH HOH A . N 8 HOH 325 525 525 HOH HOH A . N 8 HOH 326 526 526 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A CL 192 ? H CL . 2 1 A CL 193 ? I CL . 3 1 A HOH 451 ? N HOH . 4 1 A HOH 452 ? N HOH . 5 1 A HOH 453 ? N HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 95 ? A ASP 95 ? 1_555 MG ? B MG . ? A MG 161 ? 1_555 OD1 ? A ASP 97 ? A ASP 97 ? 1_555 93.4 ? 2 OD1 ? A ASP 95 ? A ASP 95 ? 1_555 MG ? B MG . ? A MG 161 ? 1_555 O ? N HOH . ? A HOH 202 ? 1_555 177.3 ? 3 OD1 ? A ASP 97 ? A ASP 97 ? 1_555 MG ? B MG . ? A MG 161 ? 1_555 O ? N HOH . ? A HOH 202 ? 1_555 86.5 ? 4 OD1 ? A ASP 95 ? A ASP 95 ? 1_555 MG ? B MG . ? A MG 161 ? 1_555 O2A ? D APC . ? A APC 171 ? 1_555 93.6 ? 5 OD1 ? A ASP 97 ? A ASP 97 ? 1_555 MG ? B MG . ? A MG 161 ? 1_555 O2A ? D APC . ? A APC 171 ? 1_555 170.6 ? 6 O ? N HOH . ? A HOH 202 ? 1_555 MG ? B MG . ? A MG 161 ? 1_555 O2A ? D APC . ? A APC 171 ? 1_555 86.3 ? 7 OD1 ? A ASP 95 ? A ASP 95 ? 1_555 MG ? B MG . ? A MG 161 ? 1_555 O ? N HOH . ? A HOH 201 ? 1_555 88.5 ? 8 OD1 ? A ASP 97 ? A ASP 97 ? 1_555 MG ? B MG . ? A MG 161 ? 1_555 O ? N HOH . ? A HOH 201 ? 1_555 85.3 ? 9 O ? N HOH . ? A HOH 202 ? 1_555 MG ? B MG . ? A MG 161 ? 1_555 O ? N HOH . ? A HOH 201 ? 1_555 88.9 ? 10 O2A ? D APC . ? A APC 171 ? 1_555 MG ? B MG . ? A MG 161 ? 1_555 O ? N HOH . ? A HOH 201 ? 1_555 88.6 ? 11 OD1 ? A ASP 95 ? A ASP 95 ? 1_555 MG ? B MG . ? A MG 161 ? 1_555 O2B ? D APC . ? A APC 171 ? 1_555 89.0 ? 12 OD1 ? A ASP 97 ? A ASP 97 ? 1_555 MG ? B MG . ? A MG 161 ? 1_555 O2B ? D APC . ? A APC 171 ? 1_555 96.5 ? 13 O ? N HOH . ? A HOH 202 ? 1_555 MG ? B MG . ? A MG 161 ? 1_555 O2B ? D APC . ? A APC 171 ? 1_555 93.7 ? 14 O2A ? D APC . ? A APC 171 ? 1_555 MG ? B MG . ? A MG 161 ? 1_555 O2B ? D APC . ? A APC 171 ? 1_555 89.9 ? 15 O ? N HOH . ? A HOH 201 ? 1_555 MG ? B MG . ? A MG 161 ? 1_555 O2B ? D APC . ? A APC 171 ? 1_555 177.0 ? 16 OD2 ? A ASP 95 ? A ASP 95 ? 1_555 MG ? C MG . ? A MG 162 ? 1_555 OD2 ? A ASP 97 ? A ASP 97 ? 1_555 91.4 ? 17 OD2 ? A ASP 95 ? A ASP 95 ? 1_555 MG ? C MG . ? A MG 162 ? 1_555 O2B ? D APC . ? A APC 171 ? 1_555 88.5 ? 18 OD2 ? A ASP 97 ? A ASP 97 ? 1_555 MG ? C MG . ? A MG 162 ? 1_555 O2B ? D APC . ? A APC 171 ? 1_555 99.1 ? 19 OD2 ? A ASP 95 ? A ASP 95 ? 1_555 MG ? C MG . ? A MG 162 ? 1_555 O1G ? D APC . ? A APC 171 ? 1_555 176.3 ? 20 OD2 ? A ASP 97 ? A ASP 97 ? 1_555 MG ? C MG . ? A MG 162 ? 1_555 O1G ? D APC . ? A APC 171 ? 1_555 91.5 ? 21 O2B ? D APC . ? A APC 171 ? 1_555 MG ? C MG . ? A MG 162 ? 1_555 O1G ? D APC . ? A APC 171 ? 1_555 88.9 ? 22 OD2 ? A ASP 95 ? A ASP 95 ? 1_555 MG ? C MG . ? A MG 162 ? 1_555 O6A A E HHR . ? A HHR 181 ? 1_555 90.2 ? 23 OD2 ? A ASP 97 ? A ASP 97 ? 1_555 MG ? C MG . ? A MG 162 ? 1_555 O6A A E HHR . ? A HHR 181 ? 1_555 169.3 ? 24 O2B ? D APC . ? A APC 171 ? 1_555 MG ? C MG . ? A MG 162 ? 1_555 O6A A E HHR . ? A HHR 181 ? 1_555 91.5 ? 25 O1G ? D APC . ? A APC 171 ? 1_555 MG ? C MG . ? A MG 162 ? 1_555 O6A A E HHR . ? A HHR 181 ? 1_555 87.3 ? 26 OD2 ? A ASP 95 ? A ASP 95 ? 1_555 MG ? C MG . ? A MG 162 ? 1_555 O6A B F HHS . ? A HHS 182 ? 1_555 83.9 ? 27 OD2 ? A ASP 97 ? A ASP 97 ? 1_555 MG ? C MG . ? A MG 162 ? 1_555 O6A B F HHS . ? A HHS 182 ? 1_555 172.1 ? 28 O2B ? D APC . ? A APC 171 ? 1_555 MG ? C MG . ? A MG 162 ? 1_555 O6A B F HHS . ? A HHS 182 ? 1_555 87.1 ? 29 O1G ? D APC . ? A APC 171 ? 1_555 MG ? C MG . ? A MG 162 ? 1_555 O6A B F HHS . ? A HHS 182 ? 1_555 93.4 ? 30 O6A A E HHR . ? A HHR 181 ? 1_555 MG ? C MG . ? A MG 162 ? 1_555 O6A B F HHS . ? A HHS 182 ? 1_555 7.6 ? 31 OD2 ? A ASP 95 ? A ASP 95 ? 1_555 MG ? C MG . ? A MG 162 ? 1_555 O ? N HOH . ? A HOH 203 ? 1_555 89.9 ? 32 OD2 ? A ASP 97 ? A ASP 97 ? 1_555 MG ? C MG . ? A MG 162 ? 1_555 O ? N HOH . ? A HOH 203 ? 1_555 89.5 ? 33 O2B ? D APC . ? A APC 171 ? 1_555 MG ? C MG . ? A MG 162 ? 1_555 O ? N HOH . ? A HOH 203 ? 1_555 171.3 ? 34 O1G ? D APC . ? A APC 171 ? 1_555 MG ? C MG . ? A MG 162 ? 1_555 O ? N HOH . ? A HOH 203 ? 1_555 92.3 ? 35 O6A A E HHR . ? A HHR 181 ? 1_555 MG ? C MG . ? A MG 162 ? 1_555 O ? N HOH . ? A HOH 203 ? 1_555 79.9 ? 36 O6A B F HHS . ? A HHS 182 ? 1_555 MG ? C MG . ? A MG 162 ? 1_555 O ? N HOH . ? A HOH 203 ? 1_555 84.2 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-04-28 2 'Structure model' 1 1 2009-10-27 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 HKL . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data processing' http://www.hkl-xray.com/ ? ? 2 PHENIX . ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 3 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 ADSC Quantum ? ? ? ? 'data collection' ? ? ? 5 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 6 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 7 CNS . ? ? ? ? phasing ? ? ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 ND2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASN _pdbx_validate_close_contact.auth_seq_id_1 107 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 B _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 284 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.10 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 HD21 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 ASN _pdbx_validate_symm_contact.auth_seq_id_1 19 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 HD21 _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 ASN _pdbx_validate_symm_contact.auth_seq_id_2 19 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_556 _pdbx_validate_symm_contact.dist 1.25 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 13 ? A 69.70 77.62 2 1 SER A 13 ? B 61.08 82.30 3 1 ASP A 49 ? ? -91.07 50.94 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 'DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER' APC 4 6-HYDROXYMETHYLPTERIN HHR 5 6-CARBOXYPTERIN HHS 6 'CHLORIDE ION' CL 7 'ACETATE ION' ACT 8 water HOH #