data_3H4B # _entry.id 3H4B # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3H4B pdb_00003h4b 10.2210/pdb3h4b/pdb NDB PD1286 ? ? RCSB RCSB052674 ? ? WWPDB D_1000052674 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3H40 . unspecified PDB 3H4O . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3H4B _pdbx_database_status.recvd_initial_deposition_date 2009-04-18 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Jain, R.' 1 'Nair, D.T.' 2 'Johnson, R.E.' 3 'Prakash, L.' 4 'Prakash, S.' 5 'Aggarwal, A.K.' 6 # _citation.id primary _citation.title 'Replication across template T/U by human DNA polymerase-iota.' _citation.journal_abbrev Structure _citation.journal_volume 17 _citation.page_first 974 _citation.page_last 980 _citation.year 2009 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19604477 _citation.pdbx_database_id_DOI 10.1016/j.str.2009.04.011 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Jain, R.' 1 ? primary 'Nair, D.T.' 2 ? primary 'Johnson, R.E.' 3 ? primary 'Prakash, L.' 4 ? primary 'Prakash, S.' 5 ? primary 'Aggarwal, A.K.' 6 ? # _cell.entry_id 3H4B _cell.length_a 97.998 _cell.length_b 97.998 _cell.length_c 203.670 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3H4B _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA polymerase iota' 44037.047 1 2.7.7.7 ? ? ? 2 polymer syn "5'-D(*AP*GP*GP*AP*CP*CP*(DOC))-3'" 2091.414 1 ? ? ? 'primer DNA strand' 3 polymer syn "5'-D(*TP*(BRU)P*GP*GP*GP*TP*CP*CP*T)-3'" 2802.665 1 ? ? ? 'template DNA strand' 4 non-polymer syn ;2'-DEOXYADENOSINE 5'-TRIPHOSPHATE ; 491.182 1 ? ? ? ? 5 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 6 water nat water 18.015 156 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'RAD30 homolog B, Eta2' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;ASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMNVRDAKEKCPQLVLVNGEDLTRYRE MSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNNQSINLLDVLHIRLLVGSQIAAEMR EAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIPGIGYKTAKCLEALGINSVRDLQTF SPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNKIEELLASLLNRVCQDGRKPHTVRL IIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMPFHLTLLSVCFCNLK ; ;ASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMNVRDAKEKCPQLVLVNGEDLTRYRE MSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNNQSINLLDVLHIRLLVGSQIAAEMR EAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIPGIGYKTAKCLEALGINSVRDLQTF SPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNKIEELLASLLNRVCQDGRKPHTVRL IIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMPFHLTLLSVCFCNLK ; A ? 2 polydeoxyribonucleotide no yes '(DA)(DG)(DG)(DA)(DC)(DC)(DOC)' AGGACCC P ? 3 polydeoxyribonucleotide no yes '(DT)(BRU)(DG)(DG)(DG)(DT)(DC)(DC)(DT)' TUGGGTCCT T ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 SER n 1 3 SER n 1 4 ARG n 1 5 VAL n 1 6 ILE n 1 7 VAL n 1 8 HIS n 1 9 VAL n 1 10 ASP n 1 11 LEU n 1 12 ASP n 1 13 CYS n 1 14 PHE n 1 15 TYR n 1 16 ALA n 1 17 GLN n 1 18 VAL n 1 19 GLU n 1 20 MET n 1 21 ILE n 1 22 SER n 1 23 ASN n 1 24 PRO n 1 25 GLU n 1 26 LEU n 1 27 LYS n 1 28 ASP n 1 29 LYS n 1 30 PRO n 1 31 LEU n 1 32 GLY n 1 33 VAL n 1 34 GLN n 1 35 GLN n 1 36 LYS n 1 37 TYR n 1 38 LEU n 1 39 VAL n 1 40 VAL n 1 41 THR n 1 42 CYS n 1 43 ASN n 1 44 TYR n 1 45 GLU n 1 46 ALA n 1 47 ARG n 1 48 LYS n 1 49 LEU n 1 50 GLY n 1 51 VAL n 1 52 LYS n 1 53 LYS n 1 54 LEU n 1 55 MET n 1 56 ASN n 1 57 VAL n 1 58 ARG n 1 59 ASP n 1 60 ALA n 1 61 LYS n 1 62 GLU n 1 63 LYS n 1 64 CYS n 1 65 PRO n 1 66 GLN n 1 67 LEU n 1 68 VAL n 1 69 LEU n 1 70 VAL n 1 71 ASN n 1 72 GLY n 1 73 GLU n 1 74 ASP n 1 75 LEU n 1 76 THR n 1 77 ARG n 1 78 TYR n 1 79 ARG n 1 80 GLU n 1 81 MET n 1 82 SER n 1 83 TYR n 1 84 LYS n 1 85 VAL n 1 86 THR n 1 87 GLU n 1 88 LEU n 1 89 LEU n 1 90 GLU n 1 91 GLU n 1 92 PHE n 1 93 SER n 1 94 PRO n 1 95 VAL n 1 96 VAL n 1 97 GLU n 1 98 ARG n 1 99 LEU n 1 100 GLY n 1 101 PHE n 1 102 ASP n 1 103 GLU n 1 104 ASN n 1 105 PHE n 1 106 VAL n 1 107 ASP n 1 108 LEU n 1 109 THR n 1 110 GLU n 1 111 MET n 1 112 VAL n 1 113 GLU n 1 114 LYS n 1 115 ARG n 1 116 LEU n 1 117 GLN n 1 118 GLN n 1 119 LEU n 1 120 GLN n 1 121 SER n 1 122 ASP n 1 123 GLU n 1 124 LEU n 1 125 SER n 1 126 ALA n 1 127 VAL n 1 128 THR n 1 129 VAL n 1 130 SER n 1 131 GLY n 1 132 HIS n 1 133 VAL n 1 134 TYR n 1 135 ASN n 1 136 ASN n 1 137 GLN n 1 138 SER n 1 139 ILE n 1 140 ASN n 1 141 LEU n 1 142 LEU n 1 143 ASP n 1 144 VAL n 1 145 LEU n 1 146 HIS n 1 147 ILE n 1 148 ARG n 1 149 LEU n 1 150 LEU n 1 151 VAL n 1 152 GLY n 1 153 SER n 1 154 GLN n 1 155 ILE n 1 156 ALA n 1 157 ALA n 1 158 GLU n 1 159 MET n 1 160 ARG n 1 161 GLU n 1 162 ALA n 1 163 MET n 1 164 TYR n 1 165 ASN n 1 166 GLN n 1 167 LEU n 1 168 GLY n 1 169 LEU n 1 170 THR n 1 171 GLY n 1 172 CYS n 1 173 ALA n 1 174 GLY n 1 175 VAL n 1 176 ALA n 1 177 SER n 1 178 ASN n 1 179 LYS n 1 180 LEU n 1 181 LEU n 1 182 ALA n 1 183 LYS n 1 184 LEU n 1 185 VAL n 1 186 SER n 1 187 GLY n 1 188 VAL n 1 189 PHE n 1 190 LYS n 1 191 PRO n 1 192 ASN n 1 193 GLN n 1 194 GLN n 1 195 THR n 1 196 VAL n 1 197 LEU n 1 198 LEU n 1 199 PRO n 1 200 GLU n 1 201 SER n 1 202 CYS n 1 203 GLN n 1 204 HIS n 1 205 LEU n 1 206 ILE n 1 207 HIS n 1 208 SER n 1 209 LEU n 1 210 ASN n 1 211 HIS n 1 212 ILE n 1 213 LYS n 1 214 GLU n 1 215 ILE n 1 216 PRO n 1 217 GLY n 1 218 ILE n 1 219 GLY n 1 220 TYR n 1 221 LYS n 1 222 THR n 1 223 ALA n 1 224 LYS n 1 225 CYS n 1 226 LEU n 1 227 GLU n 1 228 ALA n 1 229 LEU n 1 230 GLY n 1 231 ILE n 1 232 ASN n 1 233 SER n 1 234 VAL n 1 235 ARG n 1 236 ASP n 1 237 LEU n 1 238 GLN n 1 239 THR n 1 240 PHE n 1 241 SER n 1 242 PRO n 1 243 LYS n 1 244 ILE n 1 245 LEU n 1 246 GLU n 1 247 LYS n 1 248 GLU n 1 249 LEU n 1 250 GLY n 1 251 ILE n 1 252 SER n 1 253 VAL n 1 254 ALA n 1 255 GLN n 1 256 ARG n 1 257 ILE n 1 258 GLN n 1 259 LYS n 1 260 LEU n 1 261 SER n 1 262 PHE n 1 263 GLY n 1 264 GLU n 1 265 ASP n 1 266 ASN n 1 267 SER n 1 268 PRO n 1 269 VAL n 1 270 ILE n 1 271 LEU n 1 272 SER n 1 273 GLY n 1 274 PRO n 1 275 PRO n 1 276 GLN n 1 277 SER n 1 278 PHE n 1 279 SER n 1 280 GLU n 1 281 GLU n 1 282 ASP n 1 283 SER n 1 284 PHE n 1 285 LYS n 1 286 LYS n 1 287 CYS n 1 288 SER n 1 289 SER n 1 290 GLU n 1 291 VAL n 1 292 GLU n 1 293 ALA n 1 294 LYS n 1 295 ASN n 1 296 LYS n 1 297 ILE n 1 298 GLU n 1 299 GLU n 1 300 LEU n 1 301 LEU n 1 302 ALA n 1 303 SER n 1 304 LEU n 1 305 LEU n 1 306 ASN n 1 307 ARG n 1 308 VAL n 1 309 CYS n 1 310 GLN n 1 311 ASP n 1 312 GLY n 1 313 ARG n 1 314 LYS n 1 315 PRO n 1 316 HIS n 1 317 THR n 1 318 VAL n 1 319 ARG n 1 320 LEU n 1 321 ILE n 1 322 ILE n 1 323 ARG n 1 324 ARG n 1 325 TYR n 1 326 SER n 1 327 SER n 1 328 GLU n 1 329 LYS n 1 330 HIS n 1 331 TYR n 1 332 GLY n 1 333 ARG n 1 334 GLU n 1 335 SER n 1 336 ARG n 1 337 GLN n 1 338 CYS n 1 339 PRO n 1 340 ILE n 1 341 PRO n 1 342 SER n 1 343 HIS n 1 344 VAL n 1 345 ILE n 1 346 GLN n 1 347 LYS n 1 348 LEU n 1 349 GLY n 1 350 THR n 1 351 GLY n 1 352 ASN n 1 353 TYR n 1 354 ASP n 1 355 VAL n 1 356 MET n 1 357 THR n 1 358 PRO n 1 359 MET n 1 360 VAL n 1 361 ASP n 1 362 ILE n 1 363 LEU n 1 364 MET n 1 365 LYS n 1 366 LEU n 1 367 PHE n 1 368 ARG n 1 369 ASN n 1 370 MET n 1 371 VAL n 1 372 ASN n 1 373 VAL n 1 374 LYS n 1 375 MET n 1 376 PRO n 1 377 PHE n 1 378 HIS n 1 379 LEU n 1 380 THR n 1 381 LEU n 1 382 LEU n 1 383 SER n 1 384 VAL n 1 385 CYS n 1 386 PHE n 1 387 CYS n 1 388 ASN n 1 389 LEU n 1 390 LYS n 2 1 DA n 2 2 DG n 2 3 DG n 2 4 DA n 2 5 DC n 2 6 DC n 2 7 DOC n 3 1 DT n 3 2 BRU n 3 3 DG n 3 4 DG n 3 5 DG n 3 6 DT n 3 7 DC n 3 8 DC n 3 9 DT n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'POLI, RAD30B' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 4932 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP POLI_HUMAN Q9UNA4 1 ;ASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMNVRDAKEKCPQLVLVNGEDLTRYRE MSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNNQSINLLDVLHIRLLVGSQIAAEMR EAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIPGIGYKTAKCLEALGINSVRDLQTF SPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNKIEELLASLLNRVCQDGRKPHTVRL IIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMPFHLTLLSVCFCNLK ; 25 ? 2 PDB 3H4B 3H4B 3 AGGACCC 1 ? 3 PDB 3H4B 3H4B 2 TUGGGTCCT 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3H4B A 1 ? 390 ? Q9UNA4 25 ? 414 ? 25 414 2 2 3H4B T 1 ? 9 ? 3H4B 839 ? 847 ? 839 847 3 3 3H4B P 1 ? 7 ? 3H4B 867 ? 873 ? 867 873 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BRU 'DNA linking' n "5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" ? 'C9 H12 Br N2 O8 P' 387.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DOC 'DNA linking' n "2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O6 P' 291.198 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 DTP non-polymer . ;2'-DEOXYADENOSINE 5'-TRIPHOSPHATE ; ? 'C10 H16 N5 O12 P3' 491.182 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3H4B _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.88 _exptl_crystal.density_percent_sol 57.36 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '10-15% PEG 5K MME, 0.2-0.4 M Ammonium sulfate, 0.1 M MES , pH 6.5 , VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 110 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2006-08-05 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.92017 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 17-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 17-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.92017 # _reflns.entry_id 3H4B _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.85 _reflns.number_obs 14231 _reflns.number_all ? _reflns.percent_possible_obs 100 _reflns.pdbx_Rmerge_I_obs 0.092 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 22.631 _reflns.B_iso_Wilson_estimate 83.2 _reflns.pdbx_redundancy 7.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.85 _reflns_shell.d_res_low 2.95 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.380 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 6.1 _reflns_shell.pdbx_redundancy 7.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1374 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3H4B _refine.ls_number_reflns_obs 13690 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 32120.51 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 39.73 _refine.ls_d_res_high 2.85 _refine.ls_percent_reflns_obs 96.5 _refine.ls_R_factor_obs 0.240 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.240 _refine.ls_R_factor_R_free 0.281 _refine.ls_R_factor_R_free_error 0.009 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 8.0 _refine.ls_number_reflns_R_free 1094 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 52.5 _refine.aniso_B[1][1] 2.68 _refine.aniso_B[2][2] 2.68 _refine.aniso_B[3][3] -5.37 _refine.aniso_B[1][2] 7.58 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.328589 _refine.solvent_model_param_bsol 42.2426 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 2ALZ' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3H4B _refine_analyze.Luzzati_coordinate_error_obs 0.36 _refine_analyze.Luzzati_sigma_a_obs 0.29 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.46 _refine_analyze.Luzzati_sigma_a_free 0.37 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2877 _refine_hist.pdbx_number_atoms_nucleic_acid 320 _refine_hist.pdbx_number_atoms_ligand 31 _refine_hist.number_atoms_solvent 156 _refine_hist.number_atoms_total 3384 _refine_hist.d_res_high 2.85 _refine_hist.d_res_low 39.73 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.3 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 22.6 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.16 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.39 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.47 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 2.76 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 4.16 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.85 _refine_ls_shell.d_res_low 3.03 _refine_ls_shell.number_reflns_R_work 1937 _refine_ls_shell.R_factor_R_work 0.290 _refine_ls_shell.percent_reflns_obs 91.2 _refine_ls_shell.R_factor_R_free 0.333 _refine_ls_shell.R_factor_R_free_error 0.028 _refine_ls_shell.percent_reflns_R_free 7.0 _refine_ls_shell.number_reflns_R_free 145 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 dna-rna_rep.param dna-rna_rep.top 'X-RAY DIFFRACTION' 3 water_rep.param water_rep.top 'X-RAY DIFFRACTION' 4 ion.param ion.top 'X-RAY DIFFRACTION' 5 lig.par lig.top 'X-RAY DIFFRACTION' # _struct.entry_id 3H4B _struct.title 'Ternary complex of human DNA polymerase iota with template U/T and incoming dATP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3H4B _struct_keywords.pdbx_keywords REPLICATION/DNA _struct_keywords.text ;DNA polymerase iota, replication, DNA damage, DNA repair, DNA replication, DNA synthesis, DNA-binding, DNA-directed DNA polymerase, Magnesium, Metal-binding, Mutator protein, Nucleotidyltransferase, Nucleus, Schiff base, Transferase, REPLICATION-DNA COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 CYS A 13 ? ASN A 23 ? CYS A 37 ASN A 47 1 ? 11 HELX_P HELX_P2 2 PRO A 24 ? LYS A 27 ? PRO A 48 LYS A 51 5 ? 4 HELX_P HELX_P3 3 ASN A 43 ? LEU A 49 ? ASN A 67 LEU A 73 1 ? 7 HELX_P HELX_P4 4 VAL A 57 ? GLU A 62 ? VAL A 81 GLU A 86 1 ? 6 HELX_P HELX_P5 5 LEU A 75 ? SER A 93 ? LEU A 99 SER A 117 1 ? 19 HELX_P HELX_P6 6 LEU A 108 ? LEU A 119 ? LEU A 132 LEU A 143 1 ? 12 HELX_P HELX_P7 7 ASP A 122 ? ALA A 126 ? ASP A 146 ALA A 150 5 ? 5 HELX_P HELX_P8 8 ASN A 135 ? GLN A 137 ? ASN A 159 GLN A 161 5 ? 3 HELX_P HELX_P9 9 ASP A 143 ? GLY A 168 ? ASP A 167 GLY A 192 1 ? 26 HELX_P HELX_P10 10 ASN A 178 ? GLY A 187 ? ASN A 202 GLY A 211 1 ? 10 HELX_P HELX_P11 11 LEU A 198 ? GLU A 200 ? LEU A 222 GLU A 224 5 ? 3 HELX_P HELX_P12 12 SER A 201 ? SER A 208 ? SER A 225 SER A 232 1 ? 8 HELX_P HELX_P13 13 HIS A 211 ? ILE A 215 ? HIS A 235 ILE A 239 5 ? 5 HELX_P HELX_P14 14 GLY A 219 ? ALA A 228 ? GLY A 243 ALA A 252 1 ? 10 HELX_P HELX_P15 15 SER A 233 ? PHE A 240 ? SER A 257 PHE A 264 1 ? 8 HELX_P HELX_P16 16 SER A 241 ? GLY A 250 ? SER A 265 GLY A 274 1 ? 10 HELX_P HELX_P17 17 GLY A 250 ? SER A 261 ? GLY A 274 SER A 285 1 ? 12 HELX_P HELX_P18 18 LYS A 294 ? GLY A 312 ? LYS A 318 GLY A 336 1 ? 19 HELX_P HELX_P19 19 PRO A 341 ? GLN A 346 ? PRO A 365 GLN A 370 1 ? 6 HELX_P HELX_P20 20 VAL A 355 ? ASN A 369 ? VAL A 379 ASN A 393 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DC 6 "O3'" ? ? ? 1_555 B DOC 7 P ? ? P DC 872 P DOC 873 1_555 ? ? ? ? ? ? ? 1.604 ? ? covale2 covale both ? C DT 1 "O3'" ? ? ? 1_555 C BRU 2 P A ? T DT 839 T BRU 840 1_555 ? ? ? ? ? ? ? 1.618 ? ? covale3 covale both ? C DT 1 "O3'" ? ? ? 1_555 C BRU 2 P B ? T DT 839 T BRU 840 1_555 ? ? ? ? ? ? ? 1.601 ? ? covale4 covale both ? C BRU 2 "O3'" A ? ? 1_555 C DG 3 P ? ? T BRU 840 T DG 841 1_555 ? ? ? ? ? ? ? 1.614 ? ? covale5 covale both ? C BRU 2 "O3'" B ? ? 1_555 C DG 3 P ? ? T BRU 840 T DG 841 1_555 ? ? ? ? ? ? ? 1.592 ? ? metalc1 metalc ? ? F HOH . O ? ? ? 1_555 E MG . MG ? ? A HOH 529 A MG 871 1_555 ? ? ? ? ? ? ? 2.805 ? ? metalc2 metalc ? ? E MG . MG ? ? ? 1_555 D DTP . O3G ? ? A MG 871 A DTP 875 1_555 ? ? ? ? ? ? ? 2.237 ? ? metalc3 metalc ? ? E MG . MG ? ? ? 1_555 D DTP . O2A ? ? A MG 871 A DTP 875 1_555 ? ? ? ? ? ? ? 2.094 ? ? hydrog1 hydrog ? ? B DA 1 N1 ? ? ? 1_555 C DT 9 N3 ? ? P DA 867 T DT 847 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DA 1 N6 ? ? ? 1_555 C DT 9 O4 ? ? P DA 867 T DT 847 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 2 N1 ? ? ? 1_555 C DC 8 N3 ? ? P DG 868 T DC 846 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DG 2 N2 ? ? ? 1_555 C DC 8 O2 ? ? P DG 868 T DC 846 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DG 2 O6 ? ? ? 1_555 C DC 8 N4 ? ? P DG 868 T DC 846 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DG 3 N1 ? ? ? 1_555 C DC 7 N3 ? ? P DG 869 T DC 845 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DG 3 N2 ? ? ? 1_555 C DC 7 O2 ? ? P DG 869 T DC 845 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 3 O6 ? ? ? 1_555 C DC 7 N4 ? ? P DG 869 T DC 845 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DA 4 N1 ? ? ? 1_555 C DT 6 N3 ? ? P DA 870 T DT 844 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DA 4 N6 ? ? ? 1_555 C DT 6 O4 ? ? P DA 870 T DT 844 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DC 5 N3 ? ? ? 1_555 C DG 5 N1 ? ? P DC 871 T DG 843 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 5 N4 ? ? ? 1_555 C DG 5 O6 ? ? P DC 871 T DG 843 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DC 5 O2 ? ? ? 1_555 C DG 5 N2 ? ? P DC 871 T DG 843 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 6 N3 ? ? ? 1_555 C DG 4 N1 ? ? P DC 872 T DG 842 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DC 6 N4 ? ? ? 1_555 C DG 4 O6 ? ? P DC 872 T DG 842 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DC 6 O2 ? ? ? 1_555 C DG 4 N2 ? ? P DC 872 T DG 842 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DOC 7 N3 ? ? ? 1_555 C DG 3 N1 ? ? P DOC 873 T DG 841 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DOC 7 N4 ? ? ? 1_555 C DG 3 O6 ? ? P DOC 873 T DG 841 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DOC 7 O2 ? ? ? 1_555 C DG 3 N2 ? ? P DOC 873 T DG 841 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 4 ? C ? 4 ? D ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 96 ? ARG A 98 ? VAL A 120 ARG A 122 A 2 GLU A 103 ? ASP A 107 ? GLU A 127 ASP A 131 A 3 ILE A 6 ? LEU A 11 ? ILE A 30 LEU A 35 A 4 GLY A 171 ? ALA A 176 ? GLY A 195 ALA A 200 A 5 GLN A 194 ? VAL A 196 ? GLN A 218 VAL A 220 A 6 HIS A 132 ? VAL A 133 ? HIS A 156 VAL A 157 B 1 MET A 55 ? ASN A 56 ? MET A 79 ASN A 80 B 2 LEU A 38 ? CYS A 42 ? LEU A 62 CYS A 66 B 3 LEU A 31 ? GLN A 35 ? LEU A 55 GLN A 59 B 4 VAL A 68 ? ASN A 71 ? VAL A 92 ASN A 95 C 1 SER A 277 ? GLU A 280 ? SER A 301 GLU A 304 C 2 LEU A 382 ? LYS A 390 ? LEU A 406 LYS A 414 C 3 LYS A 314 ? ILE A 322 ? LYS A 338 ILE A 346 C 4 GLU A 334 ? SER A 335 ? GLU A 358 SER A 359 D 1 SER A 277 ? GLU A 280 ? SER A 301 GLU A 304 D 2 LEU A 382 ? LYS A 390 ? LEU A 406 LYS A 414 D 3 LYS A 314 ? ILE A 322 ? LYS A 338 ILE A 346 D 4 CYS A 338 ? PRO A 339 ? CYS A 362 PRO A 363 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 97 ? N GLU A 121 O PHE A 105 ? O PHE A 129 A 2 3 O ASN A 104 ? O ASN A 128 N VAL A 9 ? N VAL A 33 A 3 4 N ILE A 6 ? N ILE A 30 O ALA A 176 ? O ALA A 200 A 4 5 N VAL A 175 ? N VAL A 199 O THR A 195 ? O THR A 219 A 5 6 O GLN A 194 ? O GLN A 218 N HIS A 132 ? N HIS A 156 B 1 2 O MET A 55 ? O MET A 79 N VAL A 39 ? N VAL A 63 B 2 3 O THR A 41 ? O THR A 65 N VAL A 33 ? N VAL A 57 B 3 4 N GLN A 34 ? N GLN A 58 O VAL A 70 ? O VAL A 94 C 1 2 N PHE A 278 ? N PHE A 302 O PHE A 386 ? O PHE A 410 C 2 3 O ASN A 388 ? O ASN A 412 N HIS A 316 ? N HIS A 340 C 3 4 N ILE A 322 ? N ILE A 346 O GLU A 334 ? O GLU A 358 D 1 2 N PHE A 278 ? N PHE A 302 O PHE A 386 ? O PHE A 410 D 2 3 O ASN A 388 ? O ASN A 412 N HIS A 316 ? N HIS A 340 D 3 4 N VAL A 318 ? N VAL A 342 O CYS A 338 ? O CYS A 362 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A DTP 875 ? 12 'BINDING SITE FOR RESIDUE DTP A 875' AC2 Software A MG 871 ? 3 'BINDING SITE FOR RESIDUE MG A 871' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 CYS A 13 ? CYS A 37 . ? 1_555 ? 2 AC1 12 THR A 41 ? THR A 65 . ? 1_555 ? 3 AC1 12 ARG A 47 ? ARG A 71 . ? 1_555 ? 4 AC1 12 LYS A 53 ? LYS A 77 . ? 1_555 ? 5 AC1 12 LEU A 54 ? LEU A 78 . ? 1_555 ? 6 AC1 12 LYS A 190 ? LYS A 214 . ? 1_555 ? 7 AC1 12 HOH F . ? HOH A 526 . ? 1_555 ? 8 AC1 12 HOH F . ? HOH A 533 . ? 1_555 ? 9 AC1 12 MG E . ? MG A 871 . ? 1_555 ? 10 AC1 12 DOC B 7 ? DOC P 873 . ? 1_555 ? 11 AC1 12 BRU C 2 ? BRU T 840 . ? 1_555 ? 12 AC1 12 DG C 3 ? DG T 841 . ? 1_555 ? 13 AC2 3 ASP A 102 ? ASP A 126 . ? 1_555 ? 14 AC2 3 HOH F . ? HOH A 529 . ? 1_555 ? 15 AC2 3 DTP D . ? DTP A 875 . ? 1_555 ? # _database_PDB_matrix.entry_id 3H4B _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3H4B _atom_sites.fract_transf_matrix[1][1] 0.010204 _atom_sites.fract_transf_matrix[1][2] 0.005891 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011783 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004910 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BR C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 25 25 ALA ALA A . n A 1 2 SER 2 26 26 SER SER A . n A 1 3 SER 3 27 27 SER SER A . n A 1 4 ARG 4 28 28 ARG ARG A . n A 1 5 VAL 5 29 29 VAL VAL A . n A 1 6 ILE 6 30 30 ILE ILE A . n A 1 7 VAL 7 31 31 VAL VAL A . n A 1 8 HIS 8 32 32 HIS HIS A . n A 1 9 VAL 9 33 33 VAL VAL A . n A 1 10 ASP 10 34 34 ASP ASP A . n A 1 11 LEU 11 35 35 LEU LEU A . n A 1 12 ASP 12 36 36 ASP ASP A . n A 1 13 CYS 13 37 37 CYS CYS A . n A 1 14 PHE 14 38 38 PHE PHE A . n A 1 15 TYR 15 39 39 TYR TYR A . n A 1 16 ALA 16 40 40 ALA ALA A . n A 1 17 GLN 17 41 41 GLN GLN A . n A 1 18 VAL 18 42 42 VAL VAL A . n A 1 19 GLU 19 43 43 GLU GLU A . n A 1 20 MET 20 44 44 MET MET A . n A 1 21 ILE 21 45 45 ILE ILE A . n A 1 22 SER 22 46 46 SER SER A . n A 1 23 ASN 23 47 47 ASN ASN A . n A 1 24 PRO 24 48 48 PRO PRO A . n A 1 25 GLU 25 49 49 GLU GLU A . n A 1 26 LEU 26 50 50 LEU LEU A . n A 1 27 LYS 27 51 51 LYS LYS A . n A 1 28 ASP 28 52 52 ASP ASP A . n A 1 29 LYS 29 53 53 LYS LYS A . n A 1 30 PRO 30 54 54 PRO PRO A . n A 1 31 LEU 31 55 55 LEU LEU A . n A 1 32 GLY 32 56 56 GLY GLY A . n A 1 33 VAL 33 57 57 VAL VAL A . n A 1 34 GLN 34 58 58 GLN GLN A . n A 1 35 GLN 35 59 59 GLN GLN A . n A 1 36 LYS 36 60 60 LYS LYS A . n A 1 37 TYR 37 61 61 TYR TYR A . n A 1 38 LEU 38 62 62 LEU LEU A . n A 1 39 VAL 39 63 63 VAL VAL A . n A 1 40 VAL 40 64 64 VAL VAL A . n A 1 41 THR 41 65 65 THR THR A . n A 1 42 CYS 42 66 66 CYS CYS A . n A 1 43 ASN 43 67 67 ASN ASN A . n A 1 44 TYR 44 68 68 TYR TYR A . n A 1 45 GLU 45 69 69 GLU GLU A . n A 1 46 ALA 46 70 70 ALA ALA A . n A 1 47 ARG 47 71 71 ARG ARG A . n A 1 48 LYS 48 72 72 LYS LYS A . n A 1 49 LEU 49 73 73 LEU LEU A . n A 1 50 GLY 50 74 74 GLY GLY A . n A 1 51 VAL 51 75 75 VAL VAL A . n A 1 52 LYS 52 76 76 LYS LYS A . n A 1 53 LYS 53 77 77 LYS LYS A . n A 1 54 LEU 54 78 78 LEU LEU A . n A 1 55 MET 55 79 79 MET MET A . n A 1 56 ASN 56 80 80 ASN ASN A . n A 1 57 VAL 57 81 81 VAL VAL A . n A 1 58 ARG 58 82 82 ARG ARG A . n A 1 59 ASP 59 83 83 ASP ASP A . n A 1 60 ALA 60 84 84 ALA ALA A . n A 1 61 LYS 61 85 85 LYS LYS A . n A 1 62 GLU 62 86 86 GLU GLU A . n A 1 63 LYS 63 87 87 LYS LYS A . n A 1 64 CYS 64 88 88 CYS CYS A . n A 1 65 PRO 65 89 89 PRO PRO A . n A 1 66 GLN 66 90 90 GLN GLN A . n A 1 67 LEU 67 91 91 LEU LEU A . n A 1 68 VAL 68 92 92 VAL VAL A . n A 1 69 LEU 69 93 93 LEU LEU A . n A 1 70 VAL 70 94 94 VAL VAL A . n A 1 71 ASN 71 95 95 ASN ASN A . n A 1 72 GLY 72 96 96 GLY GLY A . n A 1 73 GLU 73 97 97 GLU GLU A . n A 1 74 ASP 74 98 98 ASP ASP A . n A 1 75 LEU 75 99 99 LEU LEU A . n A 1 76 THR 76 100 100 THR THR A . n A 1 77 ARG 77 101 101 ARG ARG A . n A 1 78 TYR 78 102 102 TYR TYR A . n A 1 79 ARG 79 103 103 ARG ARG A . n A 1 80 GLU 80 104 104 GLU GLU A . n A 1 81 MET 81 105 105 MET MET A . n A 1 82 SER 82 106 106 SER SER A . n A 1 83 TYR 83 107 107 TYR TYR A . n A 1 84 LYS 84 108 108 LYS LYS A . n A 1 85 VAL 85 109 109 VAL VAL A . n A 1 86 THR 86 110 110 THR THR A . n A 1 87 GLU 87 111 111 GLU GLU A . n A 1 88 LEU 88 112 112 LEU LEU A . n A 1 89 LEU 89 113 113 LEU LEU A . n A 1 90 GLU 90 114 114 GLU GLU A . n A 1 91 GLU 91 115 115 GLU GLU A . n A 1 92 PHE 92 116 116 PHE PHE A . n A 1 93 SER 93 117 117 SER SER A . n A 1 94 PRO 94 118 118 PRO PRO A . n A 1 95 VAL 95 119 119 VAL VAL A . n A 1 96 VAL 96 120 120 VAL VAL A . n A 1 97 GLU 97 121 121 GLU GLU A . n A 1 98 ARG 98 122 122 ARG ARG A . n A 1 99 LEU 99 123 123 LEU LEU A . n A 1 100 GLY 100 124 124 GLY GLY A . n A 1 101 PHE 101 125 125 PHE PHE A . n A 1 102 ASP 102 126 126 ASP ASP A . n A 1 103 GLU 103 127 127 GLU GLU A . n A 1 104 ASN 104 128 128 ASN ASN A . n A 1 105 PHE 105 129 129 PHE PHE A . n A 1 106 VAL 106 130 130 VAL VAL A . n A 1 107 ASP 107 131 131 ASP ASP A . n A 1 108 LEU 108 132 132 LEU LEU A . n A 1 109 THR 109 133 133 THR THR A . n A 1 110 GLU 110 134 134 GLU GLU A . n A 1 111 MET 111 135 135 MET MET A . n A 1 112 VAL 112 136 136 VAL VAL A . n A 1 113 GLU 113 137 137 GLU GLU A . n A 1 114 LYS 114 138 138 LYS LYS A . n A 1 115 ARG 115 139 139 ARG ARG A . n A 1 116 LEU 116 140 140 LEU LEU A . n A 1 117 GLN 117 141 141 GLN GLN A . n A 1 118 GLN 118 142 142 GLN GLN A . n A 1 119 LEU 119 143 143 LEU LEU A . n A 1 120 GLN 120 144 144 GLN GLN A . n A 1 121 SER 121 145 145 SER SER A . n A 1 122 ASP 122 146 146 ASP ALA A . n A 1 123 GLU 123 147 147 GLU GLU A . n A 1 124 LEU 124 148 148 LEU LEU A . n A 1 125 SER 125 149 149 SER SER A . n A 1 126 ALA 126 150 150 ALA ALA A . n A 1 127 VAL 127 151 151 VAL VAL A . n A 1 128 THR 128 152 152 THR THR A . n A 1 129 VAL 129 153 153 VAL VAL A . n A 1 130 SER 130 154 154 SER SER A . n A 1 131 GLY 131 155 155 GLY GLY A . n A 1 132 HIS 132 156 156 HIS HIS A . n A 1 133 VAL 133 157 157 VAL VAL A . n A 1 134 TYR 134 158 158 TYR TYR A . n A 1 135 ASN 135 159 159 ASN ASN A . n A 1 136 ASN 136 160 160 ASN ASN A . n A 1 137 GLN 137 161 161 GLN GLN A . n A 1 138 SER 138 162 162 SER SER A . n A 1 139 ILE 139 163 163 ILE ILE A . n A 1 140 ASN 140 164 164 ASN ASN A . n A 1 141 LEU 141 165 165 LEU LEU A . n A 1 142 LEU 142 166 166 LEU LEU A . n A 1 143 ASP 143 167 167 ASP ASP A . n A 1 144 VAL 144 168 168 VAL VAL A . n A 1 145 LEU 145 169 169 LEU LEU A . n A 1 146 HIS 146 170 170 HIS HIS A . n A 1 147 ILE 147 171 171 ILE ILE A . n A 1 148 ARG 148 172 172 ARG ARG A . n A 1 149 LEU 149 173 173 LEU LEU A . n A 1 150 LEU 150 174 174 LEU LEU A . n A 1 151 VAL 151 175 175 VAL VAL A . n A 1 152 GLY 152 176 176 GLY GLY A . n A 1 153 SER 153 177 177 SER SER A . n A 1 154 GLN 154 178 178 GLN GLN A . n A 1 155 ILE 155 179 179 ILE ILE A . n A 1 156 ALA 156 180 180 ALA ALA A . n A 1 157 ALA 157 181 181 ALA ALA A . n A 1 158 GLU 158 182 182 GLU GLU A . n A 1 159 MET 159 183 183 MET MET A . n A 1 160 ARG 160 184 184 ARG ARG A . n A 1 161 GLU 161 185 185 GLU GLU A . n A 1 162 ALA 162 186 186 ALA ALA A . n A 1 163 MET 163 187 187 MET MET A . n A 1 164 TYR 164 188 188 TYR TYR A . n A 1 165 ASN 165 189 189 ASN ASN A . n A 1 166 GLN 166 190 190 GLN GLN A . n A 1 167 LEU 167 191 191 LEU LEU A . n A 1 168 GLY 168 192 192 GLY GLY A . n A 1 169 LEU 169 193 193 LEU LEU A . n A 1 170 THR 170 194 194 THR THR A . n A 1 171 GLY 171 195 195 GLY GLY A . n A 1 172 CYS 172 196 196 CYS CYS A . n A 1 173 ALA 173 197 197 ALA ALA A . n A 1 174 GLY 174 198 198 GLY GLY A . n A 1 175 VAL 175 199 199 VAL VAL A . n A 1 176 ALA 176 200 200 ALA ALA A . n A 1 177 SER 177 201 201 SER SER A . n A 1 178 ASN 178 202 202 ASN ASN A . n A 1 179 LYS 179 203 203 LYS LYS A . n A 1 180 LEU 180 204 204 LEU LEU A . n A 1 181 LEU 181 205 205 LEU LEU A . n A 1 182 ALA 182 206 206 ALA ALA A . n A 1 183 LYS 183 207 207 LYS LYS A . n A 1 184 LEU 184 208 208 LEU LEU A . n A 1 185 VAL 185 209 209 VAL VAL A . n A 1 186 SER 186 210 210 SER SER A . n A 1 187 GLY 187 211 211 GLY GLY A . n A 1 188 VAL 188 212 212 VAL VAL A . n A 1 189 PHE 189 213 213 PHE PHE A . n A 1 190 LYS 190 214 214 LYS LYS A . n A 1 191 PRO 191 215 215 PRO PRO A . n A 1 192 ASN 192 216 216 ASN ASN A . n A 1 193 GLN 193 217 217 GLN GLN A . n A 1 194 GLN 194 218 218 GLN GLN A . n A 1 195 THR 195 219 219 THR THR A . n A 1 196 VAL 196 220 220 VAL VAL A . n A 1 197 LEU 197 221 221 LEU LEU A . n A 1 198 LEU 198 222 222 LEU LEU A . n A 1 199 PRO 199 223 223 PRO PRO A . n A 1 200 GLU 200 224 224 GLU GLU A . n A 1 201 SER 201 225 225 SER SER A . n A 1 202 CYS 202 226 226 CYS CYS A . n A 1 203 GLN 203 227 227 GLN GLN A . n A 1 204 HIS 204 228 228 HIS HIS A . n A 1 205 LEU 205 229 229 LEU LEU A . n A 1 206 ILE 206 230 230 ILE ILE A . n A 1 207 HIS 207 231 231 HIS HIS A . n A 1 208 SER 208 232 232 SER SER A . n A 1 209 LEU 209 233 233 LEU LEU A . n A 1 210 ASN 210 234 234 ASN ASN A . n A 1 211 HIS 211 235 235 HIS HIS A . n A 1 212 ILE 212 236 236 ILE ILE A . n A 1 213 LYS 213 237 237 LYS LYS A . n A 1 214 GLU 214 238 238 GLU GLU A . n A 1 215 ILE 215 239 239 ILE ILE A . n A 1 216 PRO 216 240 240 PRO PRO A . n A 1 217 GLY 217 241 241 GLY GLY A . n A 1 218 ILE 218 242 242 ILE ILE A . n A 1 219 GLY 219 243 243 GLY GLY A . n A 1 220 TYR 220 244 244 TYR TYR A . n A 1 221 LYS 221 245 245 LYS ALA A . n A 1 222 THR 222 246 246 THR THR A . n A 1 223 ALA 223 247 247 ALA ALA A . n A 1 224 LYS 224 248 248 LYS LYS A . n A 1 225 CYS 225 249 249 CYS CYS A . n A 1 226 LEU 226 250 250 LEU LEU A . n A 1 227 GLU 227 251 251 GLU GLU A . n A 1 228 ALA 228 252 252 ALA ALA A . n A 1 229 LEU 229 253 253 LEU LEU A . n A 1 230 GLY 230 254 254 GLY GLY A . n A 1 231 ILE 231 255 255 ILE ILE A . n A 1 232 ASN 232 256 256 ASN ASN A . n A 1 233 SER 233 257 257 SER SER A . n A 1 234 VAL 234 258 258 VAL VAL A . n A 1 235 ARG 235 259 259 ARG ARG A . n A 1 236 ASP 236 260 260 ASP ASP A . n A 1 237 LEU 237 261 261 LEU LEU A . n A 1 238 GLN 238 262 262 GLN GLN A . n A 1 239 THR 239 263 263 THR THR A . n A 1 240 PHE 240 264 264 PHE PHE A . n A 1 241 SER 241 265 265 SER SER A . n A 1 242 PRO 242 266 266 PRO PRO A . n A 1 243 LYS 243 267 267 LYS LYS A . n A 1 244 ILE 244 268 268 ILE ILE A . n A 1 245 LEU 245 269 269 LEU LEU A . n A 1 246 GLU 246 270 270 GLU GLU A . n A 1 247 LYS 247 271 271 LYS ALA A . n A 1 248 GLU 248 272 272 GLU GLU A . n A 1 249 LEU 249 273 273 LEU LEU A . n A 1 250 GLY 250 274 274 GLY GLY A . n A 1 251 ILE 251 275 275 ILE ILE A . n A 1 252 SER 252 276 276 SER SER A . n A 1 253 VAL 253 277 277 VAL VAL A . n A 1 254 ALA 254 278 278 ALA ALA A . n A 1 255 GLN 255 279 279 GLN GLN A . n A 1 256 ARG 256 280 280 ARG ARG A . n A 1 257 ILE 257 281 281 ILE ILE A . n A 1 258 GLN 258 282 282 GLN GLN A . n A 1 259 LYS 259 283 283 LYS LYS A . n A 1 260 LEU 260 284 284 LEU LEU A . n A 1 261 SER 261 285 285 SER SER A . n A 1 262 PHE 262 286 286 PHE PHE A . n A 1 263 GLY 263 287 287 GLY GLY A . n A 1 264 GLU 264 288 288 GLU GLU A . n A 1 265 ASP 265 289 289 ASP ASP A . n A 1 266 ASN 266 290 290 ASN ASN A . n A 1 267 SER 267 291 291 SER SER A . n A 1 268 PRO 268 292 292 PRO PRO A . n A 1 269 VAL 269 293 293 VAL VAL A . n A 1 270 ILE 270 294 294 ILE ILE A . n A 1 271 LEU 271 295 295 LEU LEU A . n A 1 272 SER 272 296 296 SER SER A . n A 1 273 GLY 273 297 297 GLY GLY A . n A 1 274 PRO 274 298 298 PRO PRO A . n A 1 275 PRO 275 299 299 PRO PRO A . n A 1 276 GLN 276 300 300 GLN GLN A . n A 1 277 SER 277 301 301 SER SER A . n A 1 278 PHE 278 302 302 PHE PHE A . n A 1 279 SER 279 303 303 SER SER A . n A 1 280 GLU 280 304 304 GLU GLU A . n A 1 281 GLU 281 305 305 GLU GLU A . n A 1 282 ASP 282 306 306 ASP ASP A . n A 1 283 SER 283 307 307 SER SER A . n A 1 284 PHE 284 308 308 PHE PHE A . n A 1 285 LYS 285 309 309 LYS LYS A . n A 1 286 LYS 286 310 310 LYS LYS A . n A 1 287 CYS 287 311 311 CYS CYS A . n A 1 288 SER 288 312 312 SER SER A . n A 1 289 SER 289 313 313 SER SER A . n A 1 290 GLU 290 314 314 GLU GLU A . n A 1 291 VAL 291 315 315 VAL ALA A . n A 1 292 GLU 292 316 316 GLU ALA A . n A 1 293 ALA 293 317 317 ALA ALA A . n A 1 294 LYS 294 318 318 LYS LYS A . n A 1 295 ASN 295 319 319 ASN ASN A . n A 1 296 LYS 296 320 320 LYS LYS A . n A 1 297 ILE 297 321 321 ILE ILE A . n A 1 298 GLU 298 322 322 GLU GLU A . n A 1 299 GLU 299 323 323 GLU GLU A . n A 1 300 LEU 300 324 324 LEU LEU A . n A 1 301 LEU 301 325 325 LEU LEU A . n A 1 302 ALA 302 326 326 ALA ALA A . n A 1 303 SER 303 327 327 SER SER A . n A 1 304 LEU 304 328 328 LEU LEU A . n A 1 305 LEU 305 329 329 LEU LEU A . n A 1 306 ASN 306 330 330 ASN ASN A . n A 1 307 ARG 307 331 331 ARG ARG A . n A 1 308 VAL 308 332 332 VAL VAL A . n A 1 309 CYS 309 333 333 CYS CYS A . n A 1 310 GLN 310 334 334 GLN GLN A . n A 1 311 ASP 311 335 335 ASP ASP A . n A 1 312 GLY 312 336 336 GLY GLY A . n A 1 313 ARG 313 337 337 ARG ARG A . n A 1 314 LYS 314 338 338 LYS ALA A . n A 1 315 PRO 315 339 339 PRO PRO A . n A 1 316 HIS 316 340 340 HIS HIS A . n A 1 317 THR 317 341 341 THR THR A . n A 1 318 VAL 318 342 342 VAL VAL A . n A 1 319 ARG 319 343 343 ARG ARG A . n A 1 320 LEU 320 344 344 LEU LEU A . n A 1 321 ILE 321 345 345 ILE ILE A . n A 1 322 ILE 322 346 346 ILE ILE A . n A 1 323 ARG 323 347 347 ARG ARG A . n A 1 324 ARG 324 348 348 ARG ARG A . n A 1 325 TYR 325 349 349 TYR ALA A . n A 1 326 SER 326 350 350 SER ALA A . n A 1 327 SER 327 351 351 SER ALA A . n A 1 328 GLU 328 352 352 GLU ALA A . n A 1 329 LYS 329 353 353 LYS ALA A . n A 1 330 HIS 330 354 354 HIS ALA A . n A 1 331 TYR 331 355 355 TYR ALA A . n A 1 332 GLY 332 356 356 GLY GLY A . n A 1 333 ARG 333 357 357 ARG ARG A . n A 1 334 GLU 334 358 358 GLU GLU A . n A 1 335 SER 335 359 359 SER SER A . n A 1 336 ARG 336 360 360 ARG ARG A . n A 1 337 GLN 337 361 361 GLN GLN A . n A 1 338 CYS 338 362 362 CYS CYS A . n A 1 339 PRO 339 363 363 PRO PRO A . n A 1 340 ILE 340 364 364 ILE ILE A . n A 1 341 PRO 341 365 365 PRO PRO A . n A 1 342 SER 342 366 366 SER SER A . n A 1 343 HIS 343 367 367 HIS ALA A . n A 1 344 VAL 344 368 368 VAL VAL A . n A 1 345 ILE 345 369 369 ILE ILE A . n A 1 346 GLN 346 370 370 GLN GLN A . n A 1 347 LYS 347 371 ? ? ? A . n A 1 348 LEU 348 372 ? ? ? A . n A 1 349 GLY 349 373 ? ? ? A . n A 1 350 THR 350 374 ? ? ? A . n A 1 351 GLY 351 375 ? ? ? A . n A 1 352 ASN 352 376 ? ? ? A . n A 1 353 TYR 353 377 ? ? ? A . n A 1 354 ASP 354 378 ? ? ? A . n A 1 355 VAL 355 379 379 VAL ALA A . n A 1 356 MET 356 380 380 MET MET A . n A 1 357 THR 357 381 381 THR THR A . n A 1 358 PRO 358 382 382 PRO PRO A . n A 1 359 MET 359 383 383 MET MET A . n A 1 360 VAL 360 384 384 VAL VAL A . n A 1 361 ASP 361 385 385 ASP ASP A . n A 1 362 ILE 362 386 386 ILE ALA A . n A 1 363 LEU 363 387 387 LEU LEU A . n A 1 364 MET 364 388 388 MET MET A . n A 1 365 LYS 365 389 389 LYS ALA A . n A 1 366 LEU 366 390 390 LEU LEU A . n A 1 367 PHE 367 391 391 PHE PHE A . n A 1 368 ARG 368 392 392 ARG ARG A . n A 1 369 ASN 369 393 393 ASN ASN A . n A 1 370 MET 370 394 394 MET MET A . n A 1 371 VAL 371 395 ? ? ? A . n A 1 372 ASN 372 396 ? ? ? A . n A 1 373 VAL 373 397 ? ? ? A . n A 1 374 LYS 374 398 ? ? ? A . n A 1 375 MET 375 399 ? ? ? A . n A 1 376 PRO 376 400 ? ? ? A . n A 1 377 PHE 377 401 ? ? ? A . n A 1 378 HIS 378 402 ? ? ? A . n A 1 379 LEU 379 403 ? ? ? A . n A 1 380 THR 380 404 404 THR THR A . n A 1 381 LEU 381 405 405 LEU ALA A . n A 1 382 LEU 382 406 406 LEU LEU A . n A 1 383 SER 383 407 407 SER SER A . n A 1 384 VAL 384 408 408 VAL VAL A . n A 1 385 CYS 385 409 409 CYS CYS A . n A 1 386 PHE 386 410 410 PHE PHE A . n A 1 387 CYS 387 411 411 CYS CYS A . n A 1 388 ASN 388 412 412 ASN ASN A . n A 1 389 LEU 389 413 413 LEU LEU A . n A 1 390 LYS 390 414 414 LYS LYS A . n B 2 1 DA 1 867 867 DA DA P . n B 2 2 DG 2 868 868 DG DG P . n B 2 3 DG 3 869 869 DG DG P . n B 2 4 DA 4 870 870 DA DA P . n B 2 5 DC 5 871 871 DC DC P . n B 2 6 DC 6 872 872 DC DC P . n B 2 7 DOC 7 873 873 DOC DOC P . n C 3 1 DT 1 839 839 DT DT T . n C 3 2 BRU 2 840 840 BRU BRU T . n C 3 3 DG 3 841 841 DG DG T . n C 3 4 DG 4 842 842 DG DG T . n C 3 5 DG 5 843 843 DG DG T . n C 3 6 DT 6 844 844 DT DT T . n C 3 7 DC 7 845 845 DC DC T . n C 3 8 DC 8 846 846 DC DC T . n C 3 9 DT 9 847 847 DT DT T . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 DTP 1 875 875 DTP DTP A . E 5 MG 1 871 871 MG MG2 A . F 6 HOH 1 1 1 HOH TIP A . F 6 HOH 2 2 2 HOH TIP A . F 6 HOH 3 4 4 HOH TIP A . F 6 HOH 4 5 5 HOH TIP A . F 6 HOH 5 6 6 HOH TIP A . F 6 HOH 6 7 7 HOH TIP A . F 6 HOH 7 9 9 HOH TIP A . F 6 HOH 8 10 10 HOH TIP A . F 6 HOH 9 11 11 HOH TIP A . F 6 HOH 10 12 12 HOH TIP A . F 6 HOH 11 13 13 HOH TIP A . F 6 HOH 12 14 14 HOH TIP A . F 6 HOH 13 15 15 HOH TIP A . F 6 HOH 14 16 16 HOH TIP A . F 6 HOH 15 17 17 HOH TIP A . F 6 HOH 16 18 18 HOH TIP A . F 6 HOH 17 19 19 HOH TIP A . F 6 HOH 18 20 20 HOH TIP A . F 6 HOH 19 21 21 HOH TIP A . F 6 HOH 20 22 22 HOH TIP A . F 6 HOH 21 23 23 HOH TIP A . F 6 HOH 22 24 24 HOH TIP A . F 6 HOH 23 415 25 HOH TIP A . F 6 HOH 24 416 26 HOH TIP A . F 6 HOH 25 417 27 HOH TIP A . F 6 HOH 26 418 28 HOH TIP A . F 6 HOH 27 419 29 HOH TIP A . F 6 HOH 28 420 30 HOH TIP A . F 6 HOH 29 421 31 HOH TIP A . F 6 HOH 30 422 32 HOH TIP A . F 6 HOH 31 423 33 HOH TIP A . F 6 HOH 32 424 34 HOH TIP A . F 6 HOH 33 425 35 HOH TIP A . F 6 HOH 34 426 36 HOH TIP A . F 6 HOH 35 427 37 HOH TIP A . F 6 HOH 36 428 38 HOH TIP A . F 6 HOH 37 429 39 HOH TIP A . F 6 HOH 38 430 40 HOH TIP A . F 6 HOH 39 431 41 HOH TIP A . F 6 HOH 40 432 42 HOH TIP A . F 6 HOH 41 433 43 HOH TIP A . F 6 HOH 42 434 44 HOH TIP A . F 6 HOH 43 435 45 HOH TIP A . F 6 HOH 44 436 47 HOH TIP A . F 6 HOH 45 437 49 HOH TIP A . F 6 HOH 46 438 50 HOH TIP A . F 6 HOH 47 439 51 HOH TIP A . F 6 HOH 48 440 54 HOH TIP A . F 6 HOH 49 441 56 HOH TIP A . F 6 HOH 50 442 57 HOH TIP A . F 6 HOH 51 443 58 HOH TIP A . F 6 HOH 52 444 59 HOH TIP A . F 6 HOH 53 445 60 HOH TIP A . F 6 HOH 54 446 61 HOH TIP A . F 6 HOH 55 447 62 HOH TIP A . F 6 HOH 56 448 63 HOH TIP A . F 6 HOH 57 449 64 HOH TIP A . F 6 HOH 58 450 65 HOH TIP A . F 6 HOH 59 451 66 HOH TIP A . F 6 HOH 60 452 67 HOH TIP A . F 6 HOH 61 453 68 HOH TIP A . F 6 HOH 62 454 69 HOH TIP A . F 6 HOH 63 455 70 HOH TIP A . F 6 HOH 64 456 71 HOH TIP A . F 6 HOH 65 457 72 HOH TIP A . F 6 HOH 66 458 73 HOH TIP A . F 6 HOH 67 459 74 HOH TIP A . F 6 HOH 68 460 75 HOH TIP A . F 6 HOH 69 461 76 HOH TIP A . F 6 HOH 70 462 77 HOH TIP A . F 6 HOH 71 463 78 HOH TIP A . F 6 HOH 72 464 79 HOH TIP A . F 6 HOH 73 465 81 HOH TIP A . F 6 HOH 74 466 82 HOH TIP A . F 6 HOH 75 467 83 HOH TIP A . F 6 HOH 76 468 84 HOH TIP A . F 6 HOH 77 469 85 HOH TIP A . F 6 HOH 78 470 87 HOH TIP A . F 6 HOH 79 471 90 HOH TIP A . F 6 HOH 80 472 92 HOH TIP A . F 6 HOH 81 473 93 HOH TIP A . F 6 HOH 82 474 95 HOH TIP A . F 6 HOH 83 475 96 HOH TIP A . F 6 HOH 84 476 97 HOH TIP A . F 6 HOH 85 477 98 HOH TIP A . F 6 HOH 86 478 99 HOH TIP A . F 6 HOH 87 479 100 HOH TIP A . F 6 HOH 88 480 101 HOH TIP A . F 6 HOH 89 481 102 HOH TIP A . F 6 HOH 90 482 104 HOH TIP A . F 6 HOH 91 483 105 HOH TIP A . F 6 HOH 92 484 106 HOH TIP A . F 6 HOH 93 485 107 HOH TIP A . F 6 HOH 94 486 108 HOH TIP A . F 6 HOH 95 487 109 HOH TIP A . F 6 HOH 96 488 110 HOH TIP A . F 6 HOH 97 489 112 HOH TIP A . F 6 HOH 98 490 113 HOH TIP A . F 6 HOH 99 491 114 HOH TIP A . F 6 HOH 100 492 116 HOH TIP A . F 6 HOH 101 493 117 HOH TIP A . F 6 HOH 102 494 118 HOH TIP A . F 6 HOH 103 495 119 HOH TIP A . F 6 HOH 104 496 120 HOH TIP A . F 6 HOH 105 497 123 HOH TIP A . F 6 HOH 106 498 124 HOH TIP A . F 6 HOH 107 499 125 HOH TIP A . F 6 HOH 108 500 126 HOH TIP A . F 6 HOH 109 501 127 HOH TIP A . F 6 HOH 110 502 128 HOH TIP A . F 6 HOH 111 503 129 HOH TIP A . F 6 HOH 112 504 131 HOH TIP A . F 6 HOH 113 505 132 HOH TIP A . F 6 HOH 114 506 133 HOH TIP A . F 6 HOH 115 507 134 HOH TIP A . F 6 HOH 116 508 136 HOH TIP A . F 6 HOH 117 509 137 HOH TIP A . F 6 HOH 118 510 138 HOH TIP A . F 6 HOH 119 511 140 HOH TIP A . F 6 HOH 120 512 141 HOH TIP A . F 6 HOH 121 513 142 HOH TIP A . F 6 HOH 122 514 143 HOH TIP A . F 6 HOH 123 515 145 HOH TIP A . F 6 HOH 124 516 146 HOH TIP A . F 6 HOH 125 517 148 HOH TIP A . F 6 HOH 126 518 149 HOH TIP A . F 6 HOH 127 519 150 HOH TIP A . F 6 HOH 128 520 151 HOH TIP A . F 6 HOH 129 521 152 HOH TIP A . F 6 HOH 130 522 153 HOH TIP A . F 6 HOH 131 523 154 HOH TIP A . F 6 HOH 132 524 156 HOH TIP A . F 6 HOH 133 525 157 HOH TIP A . F 6 HOH 134 526 159 HOH TIP A . F 6 HOH 135 527 162 HOH TIP A . F 6 HOH 136 528 164 HOH TIP A . F 6 HOH 137 529 166 HOH TIP A . F 6 HOH 138 530 167 HOH TIP A . F 6 HOH 139 531 171 HOH TIP A . F 6 HOH 140 532 172 HOH TIP A . F 6 HOH 141 533 173 HOH TIP A . G 6 HOH 1 8 8 HOH TIP P . G 6 HOH 2 80 80 HOH TIP P . G 6 HOH 3 86 86 HOH TIP P . G 6 HOH 4 103 103 HOH TIP P . G 6 HOH 5 139 139 HOH TIP P . G 6 HOH 6 147 147 HOH TIP P . G 6 HOH 7 168 168 HOH TIP P . H 6 HOH 1 3 3 HOH TIP T . H 6 HOH 2 46 46 HOH TIP T . H 6 HOH 3 53 53 HOH TIP T . H 6 HOH 4 88 88 HOH TIP T . H 6 HOH 5 91 91 HOH TIP T . H 6 HOH 6 135 135 HOH TIP T . H 6 HOH 7 169 169 HOH TIP T . H 6 HOH 8 170 170 HOH TIP T . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 B DOC 7 P DOC 873 ? DC "2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE" 2 C BRU 2 T BRU 840 ? DU ? # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4950 ? 1 MORE -27 ? 1 'SSA (A^2)' 19890 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? F HOH . ? A HOH 529 ? 1_555 MG ? E MG . ? A MG 871 ? 1_555 O3G ? D DTP . ? A DTP 875 ? 1_555 124.3 ? 2 O ? F HOH . ? A HOH 529 ? 1_555 MG ? E MG . ? A MG 871 ? 1_555 O2A ? D DTP . ? A DTP 875 ? 1_555 124.7 ? 3 O3G ? D DTP . ? A DTP 875 ? 1_555 MG ? E MG . ? A MG 871 ? 1_555 O2A ? D DTP . ? A DTP 875 ? 1_555 94.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-07-21 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' pdbx_struct_conn_angle 6 3 'Structure model' struct_conn 7 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.value' 14 3 'Structure model' '_struct_conn.pdbx_dist_value' 15 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 16 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 17 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 18 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 19 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 20 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 21 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 22 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 23 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 24 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 25 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 26 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 27 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 28 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 AMoRE phasing . ? 2 CNS refinement 1.1 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A GLY 254 ? ? O A HOH 469 ? ? 2.12 2 1 O1G A DTP 875 ? ? O A HOH 526 ? ? 2.12 3 1 O A HOH 481 ? ? O A HOH 512 ? ? 2.14 4 1 O A THR 381 ? ? O A HOH 517 ? ? 2.16 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N A LYS 214 ? ? CA A LYS 214 ? ? C A LYS 214 ? ? 127.86 111.00 16.86 2.70 N 2 1 "O4'" T DG 841 ? ? "C1'" T DG 841 ? ? N9 T DG 841 ? ? 110.67 108.30 2.37 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 26 ? ? -177.96 -57.01 2 1 CYS A 37 ? ? 19.64 53.99 3 1 SER A 46 ? ? -61.25 -72.91 4 1 GLU A 49 ? ? -49.17 -17.86 5 1 ASP A 52 ? ? 46.30 -11.29 6 1 LYS A 60 ? ? 60.38 -123.91 7 1 CYS A 88 ? ? -155.95 74.88 8 1 PRO A 89 ? ? -64.06 43.85 9 1 GLN A 90 ? ? -153.47 -14.25 10 1 SER A 145 ? ? -60.64 57.10 11 1 ASP A 146 ? ? -167.14 -65.53 12 1 ASN A 216 ? ? 37.51 65.86 13 1 LYS A 245 ? ? -61.12 -76.17 14 1 THR A 246 ? ? -37.67 -34.04 15 1 GLU A 272 ? ? -142.40 -4.78 16 1 SER A 276 ? ? -72.89 -85.03 17 1 ASP A 306 ? ? -166.24 118.80 18 1 LYS A 309 ? ? -40.20 82.39 19 1 LYS A 310 ? ? 22.74 49.93 20 1 CYS A 311 ? ? -109.64 69.26 21 1 GLU A 314 ? ? 89.20 -2.40 22 1 GLU A 316 ? ? 66.97 -31.49 23 1 ALA A 317 ? ? -75.98 24.15 24 1 CYS A 333 ? ? -67.23 -82.40 25 1 GLN A 334 ? ? -20.24 -53.59 26 1 SER A 350 ? ? 174.27 -102.72 27 1 SER A 351 ? ? -91.39 -147.13 28 1 GLU A 352 ? ? -103.38 63.38 29 1 LYS A 353 ? ? -66.13 89.55 30 1 HIS A 354 ? ? -59.31 -0.16 31 1 TYR A 355 ? ? -172.76 99.22 32 1 THR A 381 ? ? -21.82 -71.32 33 1 ASN A 393 ? ? -49.69 -17.06 34 1 ASN A 412 ? ? 60.48 65.14 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DC P 871 ? ? 0.071 'SIDE CHAIN' 2 1 DC P 872 ? ? 0.079 'SIDE CHAIN' 3 1 DG T 842 ? ? 0.069 'SIDE CHAIN' 4 1 DG T 843 ? ? 0.071 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 146 ? CG ? A ASP 122 CG 2 1 Y 1 A ASP 146 ? OD1 ? A ASP 122 OD1 3 1 Y 1 A ASP 146 ? OD2 ? A ASP 122 OD2 4 1 Y 1 A LYS 245 ? CG ? A LYS 221 CG 5 1 Y 1 A LYS 245 ? CD ? A LYS 221 CD 6 1 Y 1 A LYS 245 ? CE ? A LYS 221 CE 7 1 Y 1 A LYS 245 ? NZ ? A LYS 221 NZ 8 1 Y 1 A LYS 271 ? CG ? A LYS 247 CG 9 1 Y 1 A LYS 271 ? CD ? A LYS 247 CD 10 1 Y 1 A LYS 271 ? CE ? A LYS 247 CE 11 1 Y 1 A LYS 271 ? NZ ? A LYS 247 NZ 12 1 Y 1 A VAL 315 ? CG1 ? A VAL 291 CG1 13 1 Y 1 A VAL 315 ? CG2 ? A VAL 291 CG2 14 1 Y 1 A GLU 316 ? CG ? A GLU 292 CG 15 1 Y 1 A GLU 316 ? CD ? A GLU 292 CD 16 1 Y 1 A GLU 316 ? OE1 ? A GLU 292 OE1 17 1 Y 1 A GLU 316 ? OE2 ? A GLU 292 OE2 18 1 Y 1 A LYS 338 ? CG ? A LYS 314 CG 19 1 Y 1 A LYS 338 ? CD ? A LYS 314 CD 20 1 Y 1 A LYS 338 ? CE ? A LYS 314 CE 21 1 Y 1 A LYS 338 ? NZ ? A LYS 314 NZ 22 1 Y 1 A TYR 349 ? CG ? A TYR 325 CG 23 1 Y 1 A TYR 349 ? CD1 ? A TYR 325 CD1 24 1 Y 1 A TYR 349 ? CD2 ? A TYR 325 CD2 25 1 Y 1 A TYR 349 ? CE1 ? A TYR 325 CE1 26 1 Y 1 A TYR 349 ? CE2 ? A TYR 325 CE2 27 1 Y 1 A TYR 349 ? CZ ? A TYR 325 CZ 28 1 Y 1 A TYR 349 ? OH ? A TYR 325 OH 29 1 Y 1 A SER 350 ? OG ? A SER 326 OG 30 1 Y 1 A SER 351 ? OG ? A SER 327 OG 31 1 Y 1 A GLU 352 ? CG ? A GLU 328 CG 32 1 Y 1 A GLU 352 ? CD ? A GLU 328 CD 33 1 Y 1 A GLU 352 ? OE1 ? A GLU 328 OE1 34 1 Y 1 A GLU 352 ? OE2 ? A GLU 328 OE2 35 1 Y 1 A LYS 353 ? CG ? A LYS 329 CG 36 1 Y 1 A LYS 353 ? CD ? A LYS 329 CD 37 1 Y 1 A LYS 353 ? CE ? A LYS 329 CE 38 1 Y 1 A LYS 353 ? NZ ? A LYS 329 NZ 39 1 Y 1 A HIS 354 ? CG ? A HIS 330 CG 40 1 Y 1 A HIS 354 ? ND1 ? A HIS 330 ND1 41 1 Y 1 A HIS 354 ? CD2 ? A HIS 330 CD2 42 1 Y 1 A HIS 354 ? CE1 ? A HIS 330 CE1 43 1 Y 1 A HIS 354 ? NE2 ? A HIS 330 NE2 44 1 Y 1 A TYR 355 ? CG ? A TYR 331 CG 45 1 Y 1 A TYR 355 ? CD1 ? A TYR 331 CD1 46 1 Y 1 A TYR 355 ? CD2 ? A TYR 331 CD2 47 1 Y 1 A TYR 355 ? CE1 ? A TYR 331 CE1 48 1 Y 1 A TYR 355 ? CE2 ? A TYR 331 CE2 49 1 Y 1 A TYR 355 ? CZ ? A TYR 331 CZ 50 1 Y 1 A TYR 355 ? OH ? A TYR 331 OH 51 1 Y 1 A HIS 367 ? CG ? A HIS 343 CG 52 1 Y 1 A HIS 367 ? ND1 ? A HIS 343 ND1 53 1 Y 1 A HIS 367 ? CD2 ? A HIS 343 CD2 54 1 Y 1 A HIS 367 ? CE1 ? A HIS 343 CE1 55 1 Y 1 A HIS 367 ? NE2 ? A HIS 343 NE2 56 1 Y 1 A VAL 379 ? CG1 ? A VAL 355 CG1 57 1 Y 1 A VAL 379 ? CG2 ? A VAL 355 CG2 58 1 Y 1 A ILE 386 ? CG1 ? A ILE 362 CG1 59 1 Y 1 A ILE 386 ? CG2 ? A ILE 362 CG2 60 1 Y 1 A ILE 386 ? CD1 ? A ILE 362 CD1 61 1 Y 1 A LYS 389 ? CG ? A LYS 365 CG 62 1 Y 1 A LYS 389 ? CD ? A LYS 365 CD 63 1 Y 1 A LYS 389 ? CE ? A LYS 365 CE 64 1 Y 1 A LYS 389 ? NZ ? A LYS 365 NZ 65 1 Y 1 A LEU 405 ? CG ? A LEU 381 CG 66 1 Y 1 A LEU 405 ? CD1 ? A LEU 381 CD1 67 1 Y 1 A LEU 405 ? CD2 ? A LEU 381 CD2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LYS 371 ? A LYS 347 2 1 Y 1 A LEU 372 ? A LEU 348 3 1 Y 1 A GLY 373 ? A GLY 349 4 1 Y 1 A THR 374 ? A THR 350 5 1 Y 1 A GLY 375 ? A GLY 351 6 1 Y 1 A ASN 376 ? A ASN 352 7 1 Y 1 A TYR 377 ? A TYR 353 8 1 Y 1 A ASP 378 ? A ASP 354 9 1 Y 1 A VAL 395 ? A VAL 371 10 1 Y 1 A ASN 396 ? A ASN 372 11 1 Y 1 A VAL 397 ? A VAL 373 12 1 Y 1 A LYS 398 ? A LYS 374 13 1 Y 1 A MET 399 ? A MET 375 14 1 Y 1 A PRO 400 ? A PRO 376 15 1 Y 1 A PHE 401 ? A PHE 377 16 1 Y 1 A HIS 402 ? A HIS 378 17 1 Y 1 A LEU 403 ? A LEU 379 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BRU N1 N N N 74 BRU C2 C N N 75 BRU N3 N N N 76 BRU C4 C N N 77 BRU C5 C N N 78 BRU C6 C N N 79 BRU O2 O N N 80 BRU O4 O N N 81 BRU BR BR N N 82 BRU "C1'" C N R 83 BRU "C2'" C N N 84 BRU "C3'" C N S 85 BRU "C4'" C N R 86 BRU "O3'" O N N 87 BRU "O4'" O N N 88 BRU "C5'" C N N 89 BRU "O5'" O N N 90 BRU P P N N 91 BRU OP1 O N N 92 BRU OP2 O N N 93 BRU OP3 O N N 94 BRU HN3 H N N 95 BRU H6 H N N 96 BRU "H1'" H N N 97 BRU "H2'" H N N 98 BRU "H2''" H N N 99 BRU "H3'" H N N 100 BRU "H4'" H N N 101 BRU "HO3'" H N N 102 BRU "H5'" H N N 103 BRU "H5''" H N N 104 BRU HOP2 H N N 105 BRU HOP3 H N N 106 CYS N N N N 107 CYS CA C N R 108 CYS C C N N 109 CYS O O N N 110 CYS CB C N N 111 CYS SG S N N 112 CYS OXT O N N 113 CYS H H N N 114 CYS H2 H N N 115 CYS HA H N N 116 CYS HB2 H N N 117 CYS HB3 H N N 118 CYS HG H N N 119 CYS HXT H N N 120 DA OP3 O N N 121 DA P P N N 122 DA OP1 O N N 123 DA OP2 O N N 124 DA "O5'" O N N 125 DA "C5'" C N N 126 DA "C4'" C N R 127 DA "O4'" O N N 128 DA "C3'" C N S 129 DA "O3'" O N N 130 DA "C2'" C N N 131 DA "C1'" C N R 132 DA N9 N Y N 133 DA C8 C Y N 134 DA N7 N Y N 135 DA C5 C Y N 136 DA C6 C Y N 137 DA N6 N N N 138 DA N1 N Y N 139 DA C2 C Y N 140 DA N3 N Y N 141 DA C4 C Y N 142 DA HOP3 H N N 143 DA HOP2 H N N 144 DA "H5'" H N N 145 DA "H5''" H N N 146 DA "H4'" H N N 147 DA "H3'" H N N 148 DA "HO3'" H N N 149 DA "H2'" H N N 150 DA "H2''" H N N 151 DA "H1'" H N N 152 DA H8 H N N 153 DA H61 H N N 154 DA H62 H N N 155 DA H2 H N N 156 DC OP3 O N N 157 DC P P N N 158 DC OP1 O N N 159 DC OP2 O N N 160 DC "O5'" O N N 161 DC "C5'" C N N 162 DC "C4'" C N R 163 DC "O4'" O N N 164 DC "C3'" C N S 165 DC "O3'" O N N 166 DC "C2'" C N N 167 DC "C1'" C N R 168 DC N1 N N N 169 DC C2 C N N 170 DC O2 O N N 171 DC N3 N N N 172 DC C4 C N N 173 DC N4 N N N 174 DC C5 C N N 175 DC C6 C N N 176 DC HOP3 H N N 177 DC HOP2 H N N 178 DC "H5'" H N N 179 DC "H5''" H N N 180 DC "H4'" H N N 181 DC "H3'" H N N 182 DC "HO3'" H N N 183 DC "H2'" H N N 184 DC "H2''" H N N 185 DC "H1'" H N N 186 DC H41 H N N 187 DC H42 H N N 188 DC H5 H N N 189 DC H6 H N N 190 DG OP3 O N N 191 DG P P N N 192 DG OP1 O N N 193 DG OP2 O N N 194 DG "O5'" O N N 195 DG "C5'" C N N 196 DG "C4'" C N R 197 DG "O4'" O N N 198 DG "C3'" C N S 199 DG "O3'" O N N 200 DG "C2'" C N N 201 DG "C1'" C N R 202 DG N9 N Y N 203 DG C8 C Y N 204 DG N7 N Y N 205 DG C5 C Y N 206 DG C6 C N N 207 DG O6 O N N 208 DG N1 N N N 209 DG C2 C N N 210 DG N2 N N N 211 DG N3 N N N 212 DG C4 C Y N 213 DG HOP3 H N N 214 DG HOP2 H N N 215 DG "H5'" H N N 216 DG "H5''" H N N 217 DG "H4'" H N N 218 DG "H3'" H N N 219 DG "HO3'" H N N 220 DG "H2'" H N N 221 DG "H2''" H N N 222 DG "H1'" H N N 223 DG H8 H N N 224 DG H1 H N N 225 DG H21 H N N 226 DG H22 H N N 227 DOC N1 N N N 228 DOC C2 C N N 229 DOC N3 N N N 230 DOC C4 C N N 231 DOC C5 C N N 232 DOC C6 C N N 233 DOC O2 O N N 234 DOC N4 N N N 235 DOC "C1'" C N R 236 DOC "C2'" C N N 237 DOC "C3'" C N N 238 DOC "C4'" C N S 239 DOC "O4'" O N N 240 DOC "C5'" C N N 241 DOC "O5'" O N N 242 DOC P P N N 243 DOC OP1 O N N 244 DOC OP2 O N N 245 DOC OP3 O N N 246 DOC H5 H N N 247 DOC H6 H N N 248 DOC HN41 H N N 249 DOC HN42 H N N 250 DOC "H1'" H N N 251 DOC "H2'" H N N 252 DOC "H2''" H N N 253 DOC "H3'1" H N N 254 DOC "H3'2" H N N 255 DOC "H4'" H N N 256 DOC "H5'" H N N 257 DOC "H5''" H N N 258 DOC HOP2 H N N 259 DOC HOP3 H N N 260 DT OP3 O N N 261 DT P P N N 262 DT OP1 O N N 263 DT OP2 O N N 264 DT "O5'" O N N 265 DT "C5'" C N N 266 DT "C4'" C N R 267 DT "O4'" O N N 268 DT "C3'" C N S 269 DT "O3'" O N N 270 DT "C2'" C N N 271 DT "C1'" C N R 272 DT N1 N N N 273 DT C2 C N N 274 DT O2 O N N 275 DT N3 N N N 276 DT C4 C N N 277 DT O4 O N N 278 DT C5 C N N 279 DT C7 C N N 280 DT C6 C N N 281 DT HOP3 H N N 282 DT HOP2 H N N 283 DT "H5'" H N N 284 DT "H5''" H N N 285 DT "H4'" H N N 286 DT "H3'" H N N 287 DT "HO3'" H N N 288 DT "H2'" H N N 289 DT "H2''" H N N 290 DT "H1'" H N N 291 DT H3 H N N 292 DT H71 H N N 293 DT H72 H N N 294 DT H73 H N N 295 DT H6 H N N 296 DTP PG P N N 297 DTP O1G O N N 298 DTP O2G O N N 299 DTP O3G O N N 300 DTP PB P N S 301 DTP O1B O N N 302 DTP O2B O N N 303 DTP O3B O N N 304 DTP PA P N S 305 DTP O1A O N N 306 DTP O2A O N N 307 DTP O3A O N N 308 DTP "O5'" O N N 309 DTP "C5'" C N N 310 DTP "C4'" C N R 311 DTP "O4'" O N N 312 DTP "C3'" C N S 313 DTP "O3'" O N N 314 DTP "C2'" C N N 315 DTP "C1'" C N R 316 DTP N9 N Y N 317 DTP C8 C Y N 318 DTP N7 N Y N 319 DTP C5 C Y N 320 DTP C6 C Y N 321 DTP N6 N N N 322 DTP N1 N Y N 323 DTP C2 C Y N 324 DTP N3 N Y N 325 DTP C4 C Y N 326 DTP HOG2 H N N 327 DTP HOG3 H N N 328 DTP HOB2 H N N 329 DTP HOA2 H N N 330 DTP "H5'1" H N N 331 DTP "H5'2" H N N 332 DTP "H4'" H N N 333 DTP "H3'" H N N 334 DTP "HO3'" H N N 335 DTP "H2'1" H N N 336 DTP "H2'2" H N N 337 DTP "H1'" H N N 338 DTP H8 H N N 339 DTP HN61 H N N 340 DTP HN62 H N N 341 DTP H2 H N N 342 GLN N N N N 343 GLN CA C N S 344 GLN C C N N 345 GLN O O N N 346 GLN CB C N N 347 GLN CG C N N 348 GLN CD C N N 349 GLN OE1 O N N 350 GLN NE2 N N N 351 GLN OXT O N N 352 GLN H H N N 353 GLN H2 H N N 354 GLN HA H N N 355 GLN HB2 H N N 356 GLN HB3 H N N 357 GLN HG2 H N N 358 GLN HG3 H N N 359 GLN HE21 H N N 360 GLN HE22 H N N 361 GLN HXT H N N 362 GLU N N N N 363 GLU CA C N S 364 GLU C C N N 365 GLU O O N N 366 GLU CB C N N 367 GLU CG C N N 368 GLU CD C N N 369 GLU OE1 O N N 370 GLU OE2 O N N 371 GLU OXT O N N 372 GLU H H N N 373 GLU H2 H N N 374 GLU HA H N N 375 GLU HB2 H N N 376 GLU HB3 H N N 377 GLU HG2 H N N 378 GLU HG3 H N N 379 GLU HE2 H N N 380 GLU HXT H N N 381 GLY N N N N 382 GLY CA C N N 383 GLY C C N N 384 GLY O O N N 385 GLY OXT O N N 386 GLY H H N N 387 GLY H2 H N N 388 GLY HA2 H N N 389 GLY HA3 H N N 390 GLY HXT H N N 391 HIS N N N N 392 HIS CA C N S 393 HIS C C N N 394 HIS O O N N 395 HIS CB C N N 396 HIS CG C Y N 397 HIS ND1 N Y N 398 HIS CD2 C Y N 399 HIS CE1 C Y N 400 HIS NE2 N Y N 401 HIS OXT O N N 402 HIS H H N N 403 HIS H2 H N N 404 HIS HA H N N 405 HIS HB2 H N N 406 HIS HB3 H N N 407 HIS HD1 H N N 408 HIS HD2 H N N 409 HIS HE1 H N N 410 HIS HE2 H N N 411 HIS HXT H N N 412 HOH O O N N 413 HOH H1 H N N 414 HOH H2 H N N 415 ILE N N N N 416 ILE CA C N S 417 ILE C C N N 418 ILE O O N N 419 ILE CB C N S 420 ILE CG1 C N N 421 ILE CG2 C N N 422 ILE CD1 C N N 423 ILE OXT O N N 424 ILE H H N N 425 ILE H2 H N N 426 ILE HA H N N 427 ILE HB H N N 428 ILE HG12 H N N 429 ILE HG13 H N N 430 ILE HG21 H N N 431 ILE HG22 H N N 432 ILE HG23 H N N 433 ILE HD11 H N N 434 ILE HD12 H N N 435 ILE HD13 H N N 436 ILE HXT H N N 437 LEU N N N N 438 LEU CA C N S 439 LEU C C N N 440 LEU O O N N 441 LEU CB C N N 442 LEU CG C N N 443 LEU CD1 C N N 444 LEU CD2 C N N 445 LEU OXT O N N 446 LEU H H N N 447 LEU H2 H N N 448 LEU HA H N N 449 LEU HB2 H N N 450 LEU HB3 H N N 451 LEU HG H N N 452 LEU HD11 H N N 453 LEU HD12 H N N 454 LEU HD13 H N N 455 LEU HD21 H N N 456 LEU HD22 H N N 457 LEU HD23 H N N 458 LEU HXT H N N 459 LYS N N N N 460 LYS CA C N S 461 LYS C C N N 462 LYS O O N N 463 LYS CB C N N 464 LYS CG C N N 465 LYS CD C N N 466 LYS CE C N N 467 LYS NZ N N N 468 LYS OXT O N N 469 LYS H H N N 470 LYS H2 H N N 471 LYS HA H N N 472 LYS HB2 H N N 473 LYS HB3 H N N 474 LYS HG2 H N N 475 LYS HG3 H N N 476 LYS HD2 H N N 477 LYS HD3 H N N 478 LYS HE2 H N N 479 LYS HE3 H N N 480 LYS HZ1 H N N 481 LYS HZ2 H N N 482 LYS HZ3 H N N 483 LYS HXT H N N 484 MET N N N N 485 MET CA C N S 486 MET C C N N 487 MET O O N N 488 MET CB C N N 489 MET CG C N N 490 MET SD S N N 491 MET CE C N N 492 MET OXT O N N 493 MET H H N N 494 MET H2 H N N 495 MET HA H N N 496 MET HB2 H N N 497 MET HB3 H N N 498 MET HG2 H N N 499 MET HG3 H N N 500 MET HE1 H N N 501 MET HE2 H N N 502 MET HE3 H N N 503 MET HXT H N N 504 MG MG MG N N 505 PHE N N N N 506 PHE CA C N S 507 PHE C C N N 508 PHE O O N N 509 PHE CB C N N 510 PHE CG C Y N 511 PHE CD1 C Y N 512 PHE CD2 C Y N 513 PHE CE1 C Y N 514 PHE CE2 C Y N 515 PHE CZ C Y N 516 PHE OXT O N N 517 PHE H H N N 518 PHE H2 H N N 519 PHE HA H N N 520 PHE HB2 H N N 521 PHE HB3 H N N 522 PHE HD1 H N N 523 PHE HD2 H N N 524 PHE HE1 H N N 525 PHE HE2 H N N 526 PHE HZ H N N 527 PHE HXT H N N 528 PRO N N N N 529 PRO CA C N S 530 PRO C C N N 531 PRO O O N N 532 PRO CB C N N 533 PRO CG C N N 534 PRO CD C N N 535 PRO OXT O N N 536 PRO H H N N 537 PRO HA H N N 538 PRO HB2 H N N 539 PRO HB3 H N N 540 PRO HG2 H N N 541 PRO HG3 H N N 542 PRO HD2 H N N 543 PRO HD3 H N N 544 PRO HXT H N N 545 SER N N N N 546 SER CA C N S 547 SER C C N N 548 SER O O N N 549 SER CB C N N 550 SER OG O N N 551 SER OXT O N N 552 SER H H N N 553 SER H2 H N N 554 SER HA H N N 555 SER HB2 H N N 556 SER HB3 H N N 557 SER HG H N N 558 SER HXT H N N 559 THR N N N N 560 THR CA C N S 561 THR C C N N 562 THR O O N N 563 THR CB C N R 564 THR OG1 O N N 565 THR CG2 C N N 566 THR OXT O N N 567 THR H H N N 568 THR H2 H N N 569 THR HA H N N 570 THR HB H N N 571 THR HG1 H N N 572 THR HG21 H N N 573 THR HG22 H N N 574 THR HG23 H N N 575 THR HXT H N N 576 TYR N N N N 577 TYR CA C N S 578 TYR C C N N 579 TYR O O N N 580 TYR CB C N N 581 TYR CG C Y N 582 TYR CD1 C Y N 583 TYR CD2 C Y N 584 TYR CE1 C Y N 585 TYR CE2 C Y N 586 TYR CZ C Y N 587 TYR OH O N N 588 TYR OXT O N N 589 TYR H H N N 590 TYR H2 H N N 591 TYR HA H N N 592 TYR HB2 H N N 593 TYR HB3 H N N 594 TYR HD1 H N N 595 TYR HD2 H N N 596 TYR HE1 H N N 597 TYR HE2 H N N 598 TYR HH H N N 599 TYR HXT H N N 600 VAL N N N N 601 VAL CA C N S 602 VAL C C N N 603 VAL O O N N 604 VAL CB C N N 605 VAL CG1 C N N 606 VAL CG2 C N N 607 VAL OXT O N N 608 VAL H H N N 609 VAL H2 H N N 610 VAL HA H N N 611 VAL HB H N N 612 VAL HG11 H N N 613 VAL HG12 H N N 614 VAL HG13 H N N 615 VAL HG21 H N N 616 VAL HG22 H N N 617 VAL HG23 H N N 618 VAL HXT H N N 619 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BRU N1 C2 sing N N 70 BRU N1 C6 sing N N 71 BRU N1 "C1'" sing N N 72 BRU C2 N3 sing N N 73 BRU C2 O2 doub N N 74 BRU N3 C4 sing N N 75 BRU N3 HN3 sing N N 76 BRU C4 C5 sing N N 77 BRU C4 O4 doub N N 78 BRU C5 C6 doub N N 79 BRU C5 BR sing N N 80 BRU C6 H6 sing N N 81 BRU "C1'" "C2'" sing N N 82 BRU "C1'" "O4'" sing N N 83 BRU "C1'" "H1'" sing N N 84 BRU "C2'" "C3'" sing N N 85 BRU "C2'" "H2'" sing N N 86 BRU "C2'" "H2''" sing N N 87 BRU "C3'" "C4'" sing N N 88 BRU "C3'" "O3'" sing N N 89 BRU "C3'" "H3'" sing N N 90 BRU "C4'" "O4'" sing N N 91 BRU "C4'" "C5'" sing N N 92 BRU "C4'" "H4'" sing N N 93 BRU "O3'" "HO3'" sing N N 94 BRU "C5'" "O5'" sing N N 95 BRU "C5'" "H5'" sing N N 96 BRU "C5'" "H5''" sing N N 97 BRU "O5'" P sing N N 98 BRU P OP1 doub N N 99 BRU P OP2 sing N N 100 BRU P OP3 sing N N 101 BRU OP2 HOP2 sing N N 102 BRU OP3 HOP3 sing N N 103 CYS N CA sing N N 104 CYS N H sing N N 105 CYS N H2 sing N N 106 CYS CA C sing N N 107 CYS CA CB sing N N 108 CYS CA HA sing N N 109 CYS C O doub N N 110 CYS C OXT sing N N 111 CYS CB SG sing N N 112 CYS CB HB2 sing N N 113 CYS CB HB3 sing N N 114 CYS SG HG sing N N 115 CYS OXT HXT sing N N 116 DA OP3 P sing N N 117 DA OP3 HOP3 sing N N 118 DA P OP1 doub N N 119 DA P OP2 sing N N 120 DA P "O5'" sing N N 121 DA OP2 HOP2 sing N N 122 DA "O5'" "C5'" sing N N 123 DA "C5'" "C4'" sing N N 124 DA "C5'" "H5'" sing N N 125 DA "C5'" "H5''" sing N N 126 DA "C4'" "O4'" sing N N 127 DA "C4'" "C3'" sing N N 128 DA "C4'" "H4'" sing N N 129 DA "O4'" "C1'" sing N N 130 DA "C3'" "O3'" sing N N 131 DA "C3'" "C2'" sing N N 132 DA "C3'" "H3'" sing N N 133 DA "O3'" "HO3'" sing N N 134 DA "C2'" "C1'" sing N N 135 DA "C2'" "H2'" sing N N 136 DA "C2'" "H2''" sing N N 137 DA "C1'" N9 sing N N 138 DA "C1'" "H1'" sing N N 139 DA N9 C8 sing Y N 140 DA N9 C4 sing Y N 141 DA C8 N7 doub Y N 142 DA C8 H8 sing N N 143 DA N7 C5 sing Y N 144 DA C5 C6 sing Y N 145 DA C5 C4 doub Y N 146 DA C6 N6 sing N N 147 DA C6 N1 doub Y N 148 DA N6 H61 sing N N 149 DA N6 H62 sing N N 150 DA N1 C2 sing Y N 151 DA C2 N3 doub Y N 152 DA C2 H2 sing N N 153 DA N3 C4 sing Y N 154 DC OP3 P sing N N 155 DC OP3 HOP3 sing N N 156 DC P OP1 doub N N 157 DC P OP2 sing N N 158 DC P "O5'" sing N N 159 DC OP2 HOP2 sing N N 160 DC "O5'" "C5'" sing N N 161 DC "C5'" "C4'" sing N N 162 DC "C5'" "H5'" sing N N 163 DC "C5'" "H5''" sing N N 164 DC "C4'" "O4'" sing N N 165 DC "C4'" "C3'" sing N N 166 DC "C4'" "H4'" sing N N 167 DC "O4'" "C1'" sing N N 168 DC "C3'" "O3'" sing N N 169 DC "C3'" "C2'" sing N N 170 DC "C3'" "H3'" sing N N 171 DC "O3'" "HO3'" sing N N 172 DC "C2'" "C1'" sing N N 173 DC "C2'" "H2'" sing N N 174 DC "C2'" "H2''" sing N N 175 DC "C1'" N1 sing N N 176 DC "C1'" "H1'" sing N N 177 DC N1 C2 sing N N 178 DC N1 C6 sing N N 179 DC C2 O2 doub N N 180 DC C2 N3 sing N N 181 DC N3 C4 doub N N 182 DC C4 N4 sing N N 183 DC C4 C5 sing N N 184 DC N4 H41 sing N N 185 DC N4 H42 sing N N 186 DC C5 C6 doub N N 187 DC C5 H5 sing N N 188 DC C6 H6 sing N N 189 DG OP3 P sing N N 190 DG OP3 HOP3 sing N N 191 DG P OP1 doub N N 192 DG P OP2 sing N N 193 DG P "O5'" sing N N 194 DG OP2 HOP2 sing N N 195 DG "O5'" "C5'" sing N N 196 DG "C5'" "C4'" sing N N 197 DG "C5'" "H5'" sing N N 198 DG "C5'" "H5''" sing N N 199 DG "C4'" "O4'" sing N N 200 DG "C4'" "C3'" sing N N 201 DG "C4'" "H4'" sing N N 202 DG "O4'" "C1'" sing N N 203 DG "C3'" "O3'" sing N N 204 DG "C3'" "C2'" sing N N 205 DG "C3'" "H3'" sing N N 206 DG "O3'" "HO3'" sing N N 207 DG "C2'" "C1'" sing N N 208 DG "C2'" "H2'" sing N N 209 DG "C2'" "H2''" sing N N 210 DG "C1'" N9 sing N N 211 DG "C1'" "H1'" sing N N 212 DG N9 C8 sing Y N 213 DG N9 C4 sing Y N 214 DG C8 N7 doub Y N 215 DG C8 H8 sing N N 216 DG N7 C5 sing Y N 217 DG C5 C6 sing N N 218 DG C5 C4 doub Y N 219 DG C6 O6 doub N N 220 DG C6 N1 sing N N 221 DG N1 C2 sing N N 222 DG N1 H1 sing N N 223 DG C2 N2 sing N N 224 DG C2 N3 doub N N 225 DG N2 H21 sing N N 226 DG N2 H22 sing N N 227 DG N3 C4 sing N N 228 DOC N1 C2 sing N N 229 DOC N1 C6 sing N N 230 DOC N1 "C1'" sing N N 231 DOC C2 N3 sing N N 232 DOC C2 O2 doub N N 233 DOC N3 C4 doub N N 234 DOC C4 C5 sing N N 235 DOC C4 N4 sing N N 236 DOC C5 C6 doub N N 237 DOC C5 H5 sing N N 238 DOC C6 H6 sing N N 239 DOC N4 HN41 sing N N 240 DOC N4 HN42 sing N N 241 DOC "C1'" "C2'" sing N N 242 DOC "C1'" "O4'" sing N N 243 DOC "C1'" "H1'" sing N N 244 DOC "C2'" "C3'" sing N N 245 DOC "C2'" "H2'" sing N N 246 DOC "C2'" "H2''" sing N N 247 DOC "C3'" "C4'" sing N N 248 DOC "C3'" "H3'1" sing N N 249 DOC "C3'" "H3'2" sing N N 250 DOC "C4'" "O4'" sing N N 251 DOC "C4'" "C5'" sing N N 252 DOC "C4'" "H4'" sing N N 253 DOC "C5'" "O5'" sing N N 254 DOC "C5'" "H5'" sing N N 255 DOC "C5'" "H5''" sing N N 256 DOC "O5'" P sing N N 257 DOC P OP1 doub N N 258 DOC P OP2 sing N N 259 DOC P OP3 sing N N 260 DOC OP2 HOP2 sing N N 261 DOC OP3 HOP3 sing N N 262 DT OP3 P sing N N 263 DT OP3 HOP3 sing N N 264 DT P OP1 doub N N 265 DT P OP2 sing N N 266 DT P "O5'" sing N N 267 DT OP2 HOP2 sing N N 268 DT "O5'" "C5'" sing N N 269 DT "C5'" "C4'" sing N N 270 DT "C5'" "H5'" sing N N 271 DT "C5'" "H5''" sing N N 272 DT "C4'" "O4'" sing N N 273 DT "C4'" "C3'" sing N N 274 DT "C4'" "H4'" sing N N 275 DT "O4'" "C1'" sing N N 276 DT "C3'" "O3'" sing N N 277 DT "C3'" "C2'" sing N N 278 DT "C3'" "H3'" sing N N 279 DT "O3'" "HO3'" sing N N 280 DT "C2'" "C1'" sing N N 281 DT "C2'" "H2'" sing N N 282 DT "C2'" "H2''" sing N N 283 DT "C1'" N1 sing N N 284 DT "C1'" "H1'" sing N N 285 DT N1 C2 sing N N 286 DT N1 C6 sing N N 287 DT C2 O2 doub N N 288 DT C2 N3 sing N N 289 DT N3 C4 sing N N 290 DT N3 H3 sing N N 291 DT C4 O4 doub N N 292 DT C4 C5 sing N N 293 DT C5 C7 sing N N 294 DT C5 C6 doub N N 295 DT C7 H71 sing N N 296 DT C7 H72 sing N N 297 DT C7 H73 sing N N 298 DT C6 H6 sing N N 299 DTP PG O1G doub N N 300 DTP PG O2G sing N N 301 DTP PG O3G sing N N 302 DTP PG O3B sing N N 303 DTP O2G HOG2 sing N N 304 DTP O3G HOG3 sing N N 305 DTP PB O1B doub N N 306 DTP PB O2B sing N N 307 DTP PB O3B sing N N 308 DTP PB O3A sing N N 309 DTP O2B HOB2 sing N N 310 DTP PA O1A doub N N 311 DTP PA O2A sing N N 312 DTP PA O3A sing N N 313 DTP PA "O5'" sing N N 314 DTP O2A HOA2 sing N N 315 DTP "O5'" "C5'" sing N N 316 DTP "C5'" "C4'" sing N N 317 DTP "C5'" "H5'1" sing N N 318 DTP "C5'" "H5'2" sing N N 319 DTP "C4'" "O4'" sing N N 320 DTP "C4'" "C3'" sing N N 321 DTP "C4'" "H4'" sing N N 322 DTP "O4'" "C1'" sing N N 323 DTP "C3'" "O3'" sing N N 324 DTP "C3'" "C2'" sing N N 325 DTP "C3'" "H3'" sing N N 326 DTP "O3'" "HO3'" sing N N 327 DTP "C2'" "C1'" sing N N 328 DTP "C2'" "H2'1" sing N N 329 DTP "C2'" "H2'2" sing N N 330 DTP "C1'" N9 sing N N 331 DTP "C1'" "H1'" sing N N 332 DTP N9 C8 sing Y N 333 DTP N9 C4 sing Y N 334 DTP C8 N7 doub Y N 335 DTP C8 H8 sing N N 336 DTP N7 C5 sing Y N 337 DTP C5 C6 sing Y N 338 DTP C5 C4 doub Y N 339 DTP C6 N6 sing N N 340 DTP C6 N1 doub Y N 341 DTP N6 HN61 sing N N 342 DTP N6 HN62 sing N N 343 DTP N1 C2 sing Y N 344 DTP C2 N3 doub Y N 345 DTP C2 H2 sing N N 346 DTP N3 C4 sing Y N 347 GLN N CA sing N N 348 GLN N H sing N N 349 GLN N H2 sing N N 350 GLN CA C sing N N 351 GLN CA CB sing N N 352 GLN CA HA sing N N 353 GLN C O doub N N 354 GLN C OXT sing N N 355 GLN CB CG sing N N 356 GLN CB HB2 sing N N 357 GLN CB HB3 sing N N 358 GLN CG CD sing N N 359 GLN CG HG2 sing N N 360 GLN CG HG3 sing N N 361 GLN CD OE1 doub N N 362 GLN CD NE2 sing N N 363 GLN NE2 HE21 sing N N 364 GLN NE2 HE22 sing N N 365 GLN OXT HXT sing N N 366 GLU N CA sing N N 367 GLU N H sing N N 368 GLU N H2 sing N N 369 GLU CA C sing N N 370 GLU CA CB sing N N 371 GLU CA HA sing N N 372 GLU C O doub N N 373 GLU C OXT sing N N 374 GLU CB CG sing N N 375 GLU CB HB2 sing N N 376 GLU CB HB3 sing N N 377 GLU CG CD sing N N 378 GLU CG HG2 sing N N 379 GLU CG HG3 sing N N 380 GLU CD OE1 doub N N 381 GLU CD OE2 sing N N 382 GLU OE2 HE2 sing N N 383 GLU OXT HXT sing N N 384 GLY N CA sing N N 385 GLY N H sing N N 386 GLY N H2 sing N N 387 GLY CA C sing N N 388 GLY CA HA2 sing N N 389 GLY CA HA3 sing N N 390 GLY C O doub N N 391 GLY C OXT sing N N 392 GLY OXT HXT sing N N 393 HIS N CA sing N N 394 HIS N H sing N N 395 HIS N H2 sing N N 396 HIS CA C sing N N 397 HIS CA CB sing N N 398 HIS CA HA sing N N 399 HIS C O doub N N 400 HIS C OXT sing N N 401 HIS CB CG sing N N 402 HIS CB HB2 sing N N 403 HIS CB HB3 sing N N 404 HIS CG ND1 sing Y N 405 HIS CG CD2 doub Y N 406 HIS ND1 CE1 doub Y N 407 HIS ND1 HD1 sing N N 408 HIS CD2 NE2 sing Y N 409 HIS CD2 HD2 sing N N 410 HIS CE1 NE2 sing Y N 411 HIS CE1 HE1 sing N N 412 HIS NE2 HE2 sing N N 413 HIS OXT HXT sing N N 414 HOH O H1 sing N N 415 HOH O H2 sing N N 416 ILE N CA sing N N 417 ILE N H sing N N 418 ILE N H2 sing N N 419 ILE CA C sing N N 420 ILE CA CB sing N N 421 ILE CA HA sing N N 422 ILE C O doub N N 423 ILE C OXT sing N N 424 ILE CB CG1 sing N N 425 ILE CB CG2 sing N N 426 ILE CB HB sing N N 427 ILE CG1 CD1 sing N N 428 ILE CG1 HG12 sing N N 429 ILE CG1 HG13 sing N N 430 ILE CG2 HG21 sing N N 431 ILE CG2 HG22 sing N N 432 ILE CG2 HG23 sing N N 433 ILE CD1 HD11 sing N N 434 ILE CD1 HD12 sing N N 435 ILE CD1 HD13 sing N N 436 ILE OXT HXT sing N N 437 LEU N CA sing N N 438 LEU N H sing N N 439 LEU N H2 sing N N 440 LEU CA C sing N N 441 LEU CA CB sing N N 442 LEU CA HA sing N N 443 LEU C O doub N N 444 LEU C OXT sing N N 445 LEU CB CG sing N N 446 LEU CB HB2 sing N N 447 LEU CB HB3 sing N N 448 LEU CG CD1 sing N N 449 LEU CG CD2 sing N N 450 LEU CG HG sing N N 451 LEU CD1 HD11 sing N N 452 LEU CD1 HD12 sing N N 453 LEU CD1 HD13 sing N N 454 LEU CD2 HD21 sing N N 455 LEU CD2 HD22 sing N N 456 LEU CD2 HD23 sing N N 457 LEU OXT HXT sing N N 458 LYS N CA sing N N 459 LYS N H sing N N 460 LYS N H2 sing N N 461 LYS CA C sing N N 462 LYS CA CB sing N N 463 LYS CA HA sing N N 464 LYS C O doub N N 465 LYS C OXT sing N N 466 LYS CB CG sing N N 467 LYS CB HB2 sing N N 468 LYS CB HB3 sing N N 469 LYS CG CD sing N N 470 LYS CG HG2 sing N N 471 LYS CG HG3 sing N N 472 LYS CD CE sing N N 473 LYS CD HD2 sing N N 474 LYS CD HD3 sing N N 475 LYS CE NZ sing N N 476 LYS CE HE2 sing N N 477 LYS CE HE3 sing N N 478 LYS NZ HZ1 sing N N 479 LYS NZ HZ2 sing N N 480 LYS NZ HZ3 sing N N 481 LYS OXT HXT sing N N 482 MET N CA sing N N 483 MET N H sing N N 484 MET N H2 sing N N 485 MET CA C sing N N 486 MET CA CB sing N N 487 MET CA HA sing N N 488 MET C O doub N N 489 MET C OXT sing N N 490 MET CB CG sing N N 491 MET CB HB2 sing N N 492 MET CB HB3 sing N N 493 MET CG SD sing N N 494 MET CG HG2 sing N N 495 MET CG HG3 sing N N 496 MET SD CE sing N N 497 MET CE HE1 sing N N 498 MET CE HE2 sing N N 499 MET CE HE3 sing N N 500 MET OXT HXT sing N N 501 PHE N CA sing N N 502 PHE N H sing N N 503 PHE N H2 sing N N 504 PHE CA C sing N N 505 PHE CA CB sing N N 506 PHE CA HA sing N N 507 PHE C O doub N N 508 PHE C OXT sing N N 509 PHE CB CG sing N N 510 PHE CB HB2 sing N N 511 PHE CB HB3 sing N N 512 PHE CG CD1 doub Y N 513 PHE CG CD2 sing Y N 514 PHE CD1 CE1 sing Y N 515 PHE CD1 HD1 sing N N 516 PHE CD2 CE2 doub Y N 517 PHE CD2 HD2 sing N N 518 PHE CE1 CZ doub Y N 519 PHE CE1 HE1 sing N N 520 PHE CE2 CZ sing Y N 521 PHE CE2 HE2 sing N N 522 PHE CZ HZ sing N N 523 PHE OXT HXT sing N N 524 PRO N CA sing N N 525 PRO N CD sing N N 526 PRO N H sing N N 527 PRO CA C sing N N 528 PRO CA CB sing N N 529 PRO CA HA sing N N 530 PRO C O doub N N 531 PRO C OXT sing N N 532 PRO CB CG sing N N 533 PRO CB HB2 sing N N 534 PRO CB HB3 sing N N 535 PRO CG CD sing N N 536 PRO CG HG2 sing N N 537 PRO CG HG3 sing N N 538 PRO CD HD2 sing N N 539 PRO CD HD3 sing N N 540 PRO OXT HXT sing N N 541 SER N CA sing N N 542 SER N H sing N N 543 SER N H2 sing N N 544 SER CA C sing N N 545 SER CA CB sing N N 546 SER CA HA sing N N 547 SER C O doub N N 548 SER C OXT sing N N 549 SER CB OG sing N N 550 SER CB HB2 sing N N 551 SER CB HB3 sing N N 552 SER OG HG sing N N 553 SER OXT HXT sing N N 554 THR N CA sing N N 555 THR N H sing N N 556 THR N H2 sing N N 557 THR CA C sing N N 558 THR CA CB sing N N 559 THR CA HA sing N N 560 THR C O doub N N 561 THR C OXT sing N N 562 THR CB OG1 sing N N 563 THR CB CG2 sing N N 564 THR CB HB sing N N 565 THR OG1 HG1 sing N N 566 THR CG2 HG21 sing N N 567 THR CG2 HG22 sing N N 568 THR CG2 HG23 sing N N 569 THR OXT HXT sing N N 570 TYR N CA sing N N 571 TYR N H sing N N 572 TYR N H2 sing N N 573 TYR CA C sing N N 574 TYR CA CB sing N N 575 TYR CA HA sing N N 576 TYR C O doub N N 577 TYR C OXT sing N N 578 TYR CB CG sing N N 579 TYR CB HB2 sing N N 580 TYR CB HB3 sing N N 581 TYR CG CD1 doub Y N 582 TYR CG CD2 sing Y N 583 TYR CD1 CE1 sing Y N 584 TYR CD1 HD1 sing N N 585 TYR CD2 CE2 doub Y N 586 TYR CD2 HD2 sing N N 587 TYR CE1 CZ doub Y N 588 TYR CE1 HE1 sing N N 589 TYR CE2 CZ sing Y N 590 TYR CE2 HE2 sing N N 591 TYR CZ OH sing N N 592 TYR OH HH sing N N 593 TYR OXT HXT sing N N 594 VAL N CA sing N N 595 VAL N H sing N N 596 VAL N H2 sing N N 597 VAL CA C sing N N 598 VAL CA CB sing N N 599 VAL CA HA sing N N 600 VAL C O doub N N 601 VAL C OXT sing N N 602 VAL CB CG1 sing N N 603 VAL CB CG2 sing N N 604 VAL CB HB sing N N 605 VAL CG1 HG11 sing N N 606 VAL CG1 HG12 sing N N 607 VAL CG1 HG13 sing N N 608 VAL CG2 HG21 sing N N 609 VAL CG2 HG22 sing N N 610 VAL CG2 HG23 sing N N 611 VAL OXT HXT sing N N 612 # _ndb_struct_conf_na.entry_id 3H4B _ndb_struct_conf_na.feature 'double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DA 1 1_555 C DT 9 1_555 -0.068 -0.291 0.325 8.780 -1.038 -0.191 1 P_DA867:DT847_T P 867 ? T 847 ? 20 1 1 B DG 2 1_555 C DC 8 1_555 -0.137 0.037 -0.084 3.101 -1.909 -1.606 2 P_DG868:DC846_T P 868 ? T 846 ? 19 1 1 B DG 3 1_555 C DC 7 1_555 -0.121 -0.028 -0.445 -0.221 -1.071 -2.658 3 P_DG869:DC845_T P 869 ? T 845 ? 19 1 1 B DA 4 1_555 C DT 6 1_555 0.150 -0.132 -0.179 9.530 7.066 0.037 4 P_DA870:DT844_T P 870 ? T 844 ? 20 1 1 B DC 5 1_555 C DG 5 1_555 -0.083 -0.136 -0.743 17.995 -0.764 0.211 5 P_DC871:DG843_T P 871 ? T 843 ? 19 1 1 B DC 6 1_555 C DG 4 1_555 0.046 -0.234 -0.700 11.551 3.143 -2.424 6 P_DC872:DG842_T P 872 ? T 842 ? 19 1 1 B DOC 7 1_555 C DG 3 1_555 0.132 -0.140 -0.559 6.725 6.807 -2.746 7 P_DOC873:DG841_T P 873 ? T 841 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DA 1 1_555 C DT 9 1_555 B DG 2 1_555 C DC 8 1_555 0.507 -0.781 3.564 3.664 -0.338 29.894 -1.427 -0.152 3.607 -0.651 -7.068 30.115 1 PP_DA867DG868:DC846DT847_TT P 867 ? T 847 ? P 868 ? T 846 ? 1 B DG 2 1_555 C DC 8 1_555 B DG 3 1_555 C DC 7 1_555 0.125 -0.894 3.479 2.751 0.269 37.056 -1.441 0.194 3.472 0.423 -4.321 37.156 2 PP_DG868DG869:DC845DC846_TT P 868 ? T 846 ? P 869 ? T 845 ? 1 B DG 3 1_555 C DC 7 1_555 B DA 4 1_555 C DT 6 1_555 0.046 -0.219 3.149 -3.468 5.993 31.936 -1.384 -0.658 3.038 10.734 6.212 32.659 3 PP_DG869DA870:DT844DC845_TT P 869 ? T 845 ? P 870 ? T 844 ? 1 B DA 4 1_555 C DT 6 1_555 B DC 5 1_555 C DG 5 1_555 0.562 -0.871 3.122 1.707 3.398 28.722 -2.449 -0.767 3.028 6.811 -3.423 28.967 4 PP_DA870DC871:DG843DT844_TT P 870 ? T 844 ? P 871 ? T 843 ? 1 B DC 5 1_555 C DG 5 1_555 B DC 6 1_555 C DG 4 1_555 -0.517 -1.418 3.626 -3.152 11.862 30.772 -4.577 0.354 2.932 21.320 5.665 33.074 5 PP_DC871DC872:DG842DG843_TT P 871 ? T 843 ? P 872 ? T 842 ? 1 B DC 6 1_555 C DG 4 1_555 B DOC 7 1_555 C DG 3 1_555 -0.638 -1.271 3.541 -0.876 9.620 24.906 -5.304 1.149 2.878 21.309 1.941 26.686 6 PP_DC872DOC873:DG841DG842_TT P 872 ? T 842 ? P 873 ? T 841 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 ;2'-DEOXYADENOSINE 5'-TRIPHOSPHATE ; DTP 5 'MAGNESIUM ION' MG 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2ALZ _pdbx_initial_refinement_model.details 'PDB ENTRY 2ALZ' #