data_3H4D # _entry.id 3H4D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3H4D pdb_00003h4d 10.2210/pdb3h4d/pdb NDB PD1287 ? ? RCSB RCSB052676 ? ? WWPDB D_1000052676 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3H40 . unspecified PDB 3H4B . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3H4D _pdbx_database_status.recvd_initial_deposition_date 2009-04-18 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Jain, R.' 1 'Nair, D.T.' 2 'Johnson, R.E.' 3 'Prakash, L.' 4 'Prakash, S.' 5 'Aggarwal, A.K.' 6 # _citation.id primary _citation.title 'Replication across template T/U by human DNA polymerase-iota.' _citation.journal_abbrev Structure _citation.journal_volume 17 _citation.page_first 974 _citation.page_last 980 _citation.year 2009 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19604477 _citation.pdbx_database_id_DOI 10.1016/j.str.2009.04.011 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Jain, R.' 1 ? primary 'Nair, D.T.' 2 ? primary 'Johnson, R.E.' 3 ? primary 'Prakash, L.' 4 ? primary 'Prakash, S.' 5 ? primary 'Aggarwal, A.K.' 6 ? # _cell.entry_id 3H4D _cell.length_a 97.915 _cell.length_b 97.915 _cell.length_c 203.392 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3H4D _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA polymerase iota' 44037.047 1 2.7.7.7 ? 'polymerase iota' ? 2 polymer syn "5'-D(*AP*GP*GP*AP*CP*CP*(DOC))" 2091.414 1 ? ? 'primer DNA strand' 'primer DNA strand' 3 polymer syn "5'-D(*TP*(BRU)P*GP*GP*GP*TP*CP*CP*T)" 2802.665 1 ? ? 'template DNA strand' 'template DNA strand' 4 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 5 non-polymer syn "2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE" 507.181 1 ? ? 'magnesium ion' 'incoming nucleotide' 6 water nat water 18.015 272 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'RAD30 homolog B, Eta2' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;ASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMNVRDAKEKCPQLVLVNGEDLTRYRE MSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNNQSINLLDVLHIRLLVGSQIAAEMR EAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIPGIGYKTAKCLEALGINSVRDLQTF SPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNKIEELLASLLNRVCQDGRKPHTVRL IIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMPFHLTLLSVCFCNLK ; ;ASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMNVRDAKEKCPQLVLVNGEDLTRYRE MSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNNQSINLLDVLHIRLLVGSQIAAEMR EAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIPGIGYKTAKCLEALGINSVRDLQTF SPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNKIEELLASLLNRVCQDGRKPHTVRL IIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMPFHLTLLSVCFCNLK ; A ? 2 polydeoxyribonucleotide no yes '(DA)(DG)(DG)(DA)(DC)(DC)(DOC)' AGGACCC P ? 3 polydeoxyribonucleotide no yes '(DT)(BRU)(DG)(DG)(DG)(DT)(DC)(DC)(DT)' TUGGGTCCT T ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 SER n 1 3 SER n 1 4 ARG n 1 5 VAL n 1 6 ILE n 1 7 VAL n 1 8 HIS n 1 9 VAL n 1 10 ASP n 1 11 LEU n 1 12 ASP n 1 13 CYS n 1 14 PHE n 1 15 TYR n 1 16 ALA n 1 17 GLN n 1 18 VAL n 1 19 GLU n 1 20 MET n 1 21 ILE n 1 22 SER n 1 23 ASN n 1 24 PRO n 1 25 GLU n 1 26 LEU n 1 27 LYS n 1 28 ASP n 1 29 LYS n 1 30 PRO n 1 31 LEU n 1 32 GLY n 1 33 VAL n 1 34 GLN n 1 35 GLN n 1 36 LYS n 1 37 TYR n 1 38 LEU n 1 39 VAL n 1 40 VAL n 1 41 THR n 1 42 CYS n 1 43 ASN n 1 44 TYR n 1 45 GLU n 1 46 ALA n 1 47 ARG n 1 48 LYS n 1 49 LEU n 1 50 GLY n 1 51 VAL n 1 52 LYS n 1 53 LYS n 1 54 LEU n 1 55 MET n 1 56 ASN n 1 57 VAL n 1 58 ARG n 1 59 ASP n 1 60 ALA n 1 61 LYS n 1 62 GLU n 1 63 LYS n 1 64 CYS n 1 65 PRO n 1 66 GLN n 1 67 LEU n 1 68 VAL n 1 69 LEU n 1 70 VAL n 1 71 ASN n 1 72 GLY n 1 73 GLU n 1 74 ASP n 1 75 LEU n 1 76 THR n 1 77 ARG n 1 78 TYR n 1 79 ARG n 1 80 GLU n 1 81 MET n 1 82 SER n 1 83 TYR n 1 84 LYS n 1 85 VAL n 1 86 THR n 1 87 GLU n 1 88 LEU n 1 89 LEU n 1 90 GLU n 1 91 GLU n 1 92 PHE n 1 93 SER n 1 94 PRO n 1 95 VAL n 1 96 VAL n 1 97 GLU n 1 98 ARG n 1 99 LEU n 1 100 GLY n 1 101 PHE n 1 102 ASP n 1 103 GLU n 1 104 ASN n 1 105 PHE n 1 106 VAL n 1 107 ASP n 1 108 LEU n 1 109 THR n 1 110 GLU n 1 111 MET n 1 112 VAL n 1 113 GLU n 1 114 LYS n 1 115 ARG n 1 116 LEU n 1 117 GLN n 1 118 GLN n 1 119 LEU n 1 120 GLN n 1 121 SER n 1 122 ASP n 1 123 GLU n 1 124 LEU n 1 125 SER n 1 126 ALA n 1 127 VAL n 1 128 THR n 1 129 VAL n 1 130 SER n 1 131 GLY n 1 132 HIS n 1 133 VAL n 1 134 TYR n 1 135 ASN n 1 136 ASN n 1 137 GLN n 1 138 SER n 1 139 ILE n 1 140 ASN n 1 141 LEU n 1 142 LEU n 1 143 ASP n 1 144 VAL n 1 145 LEU n 1 146 HIS n 1 147 ILE n 1 148 ARG n 1 149 LEU n 1 150 LEU n 1 151 VAL n 1 152 GLY n 1 153 SER n 1 154 GLN n 1 155 ILE n 1 156 ALA n 1 157 ALA n 1 158 GLU n 1 159 MET n 1 160 ARG n 1 161 GLU n 1 162 ALA n 1 163 MET n 1 164 TYR n 1 165 ASN n 1 166 GLN n 1 167 LEU n 1 168 GLY n 1 169 LEU n 1 170 THR n 1 171 GLY n 1 172 CYS n 1 173 ALA n 1 174 GLY n 1 175 VAL n 1 176 ALA n 1 177 SER n 1 178 ASN n 1 179 LYS n 1 180 LEU n 1 181 LEU n 1 182 ALA n 1 183 LYS n 1 184 LEU n 1 185 VAL n 1 186 SER n 1 187 GLY n 1 188 VAL n 1 189 PHE n 1 190 LYS n 1 191 PRO n 1 192 ASN n 1 193 GLN n 1 194 GLN n 1 195 THR n 1 196 VAL n 1 197 LEU n 1 198 LEU n 1 199 PRO n 1 200 GLU n 1 201 SER n 1 202 CYS n 1 203 GLN n 1 204 HIS n 1 205 LEU n 1 206 ILE n 1 207 HIS n 1 208 SER n 1 209 LEU n 1 210 ASN n 1 211 HIS n 1 212 ILE n 1 213 LYS n 1 214 GLU n 1 215 ILE n 1 216 PRO n 1 217 GLY n 1 218 ILE n 1 219 GLY n 1 220 TYR n 1 221 LYS n 1 222 THR n 1 223 ALA n 1 224 LYS n 1 225 CYS n 1 226 LEU n 1 227 GLU n 1 228 ALA n 1 229 LEU n 1 230 GLY n 1 231 ILE n 1 232 ASN n 1 233 SER n 1 234 VAL n 1 235 ARG n 1 236 ASP n 1 237 LEU n 1 238 GLN n 1 239 THR n 1 240 PHE n 1 241 SER n 1 242 PRO n 1 243 LYS n 1 244 ILE n 1 245 LEU n 1 246 GLU n 1 247 LYS n 1 248 GLU n 1 249 LEU n 1 250 GLY n 1 251 ILE n 1 252 SER n 1 253 VAL n 1 254 ALA n 1 255 GLN n 1 256 ARG n 1 257 ILE n 1 258 GLN n 1 259 LYS n 1 260 LEU n 1 261 SER n 1 262 PHE n 1 263 GLY n 1 264 GLU n 1 265 ASP n 1 266 ASN n 1 267 SER n 1 268 PRO n 1 269 VAL n 1 270 ILE n 1 271 LEU n 1 272 SER n 1 273 GLY n 1 274 PRO n 1 275 PRO n 1 276 GLN n 1 277 SER n 1 278 PHE n 1 279 SER n 1 280 GLU n 1 281 GLU n 1 282 ASP n 1 283 SER n 1 284 PHE n 1 285 LYS n 1 286 LYS n 1 287 CYS n 1 288 SER n 1 289 SER n 1 290 GLU n 1 291 VAL n 1 292 GLU n 1 293 ALA n 1 294 LYS n 1 295 ASN n 1 296 LYS n 1 297 ILE n 1 298 GLU n 1 299 GLU n 1 300 LEU n 1 301 LEU n 1 302 ALA n 1 303 SER n 1 304 LEU n 1 305 LEU n 1 306 ASN n 1 307 ARG n 1 308 VAL n 1 309 CYS n 1 310 GLN n 1 311 ASP n 1 312 GLY n 1 313 ARG n 1 314 LYS n 1 315 PRO n 1 316 HIS n 1 317 THR n 1 318 VAL n 1 319 ARG n 1 320 LEU n 1 321 ILE n 1 322 ILE n 1 323 ARG n 1 324 ARG n 1 325 TYR n 1 326 SER n 1 327 SER n 1 328 GLU n 1 329 LYS n 1 330 HIS n 1 331 TYR n 1 332 GLY n 1 333 ARG n 1 334 GLU n 1 335 SER n 1 336 ARG n 1 337 GLN n 1 338 CYS n 1 339 PRO n 1 340 ILE n 1 341 PRO n 1 342 SER n 1 343 HIS n 1 344 VAL n 1 345 ILE n 1 346 GLN n 1 347 LYS n 1 348 LEU n 1 349 GLY n 1 350 THR n 1 351 GLY n 1 352 ASN n 1 353 TYR n 1 354 ASP n 1 355 VAL n 1 356 MET n 1 357 THR n 1 358 PRO n 1 359 MET n 1 360 VAL n 1 361 ASP n 1 362 ILE n 1 363 LEU n 1 364 MET n 1 365 LYS n 1 366 LEU n 1 367 PHE n 1 368 ARG n 1 369 ASN n 1 370 MET n 1 371 VAL n 1 372 ASN n 1 373 VAL n 1 374 LYS n 1 375 MET n 1 376 PRO n 1 377 PHE n 1 378 HIS n 1 379 LEU n 1 380 THR n 1 381 LEU n 1 382 LEU n 1 383 SER n 1 384 VAL n 1 385 CYS n 1 386 PHE n 1 387 CYS n 1 388 ASN n 1 389 LEU n 1 390 LYS n 2 1 DA n 2 2 DG n 2 3 DG n 2 4 DA n 2 5 DC n 2 6 DC n 2 7 DOC n 3 1 DT n 3 2 BRU n 3 3 DG n 3 4 DG n 3 5 DG n 3 6 DT n 3 7 DC n 3 8 DC n 3 9 DT n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'POLI, RAD30B' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 4932 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP POLI_HUMAN Q9UNA4 1 ;ASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMNVRDAKEKCPQLVLVNGEDLTRYRE MSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNNQSINLLDVLHIRLLVGSQIAAEMR EAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIPGIGYKTAKCLEALGINSVRDLQTF SPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNKIEELLASLLNRVCQDGRKPHTVRL IIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMPFHLTLLSVCFCNLK ; 25 ? 2 PDB 3H4D 3H4D 3 AGGACCC 1 ? 3 PDB 3H4D 3H4D 2 TUGGGTCCT 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3H4D A 1 ? 390 ? Q9UNA4 25 ? 414 ? 25 414 2 2 3H4D T 1 ? 9 ? 3H4D 839 ? 847 ? 839 847 3 3 3H4D P 1 ? 7 ? 3H4D 867 ? 873 ? 867 873 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BRU 'DNA linking' n "5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" ? 'C9 H12 Br N2 O8 P' 387.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DGT non-polymer . "2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O13 P3' 507.181 DOC 'DNA linking' n "2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O6 P' 291.198 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3H4D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.88 _exptl_crystal.density_percent_sol 57.23 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '10-15% PEG 5K MME, 0.2-0.4 M Ammonium sulfate, 0.1 M MES , pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 110 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2006-08-05 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.92017 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 17-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 17-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.92017 # _reflns.entry_id 3H4D _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.2 _reflns.number_obs 30091 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.086 _reflns.pdbx_netI_over_sigmaI 31.4 _reflns.B_iso_Wilson_estimate 26.0 _reflns.pdbx_redundancy 14.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.28 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.433 _reflns_shell.meanI_over_sigI_obs 5.9 _reflns_shell.pdbx_redundancy 14.6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2946 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3H4D _refine.ls_number_reflns_obs 28795 _refine.ls_number_reflns_all 28795 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 54308.56 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 36.68 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 95.7 _refine.ls_R_factor_obs 0.254 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.254 _refine.ls_R_factor_R_free 0.270 _refine.ls_R_factor_R_free_error 0.006 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 8.0 _refine.ls_number_reflns_R_free 2306 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 50.9 _refine.aniso_B[1][1] 1.63 _refine.aniso_B[2][2] 1.63 _refine.aniso_B[3][3] -3.26 _refine.aniso_B[1][2] -0.80 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.338411 _refine.solvent_model_param_bsol 50.5225 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 2ALZ' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3H4D _refine_analyze.Luzzati_coordinate_error_obs 0.32 _refine_analyze.Luzzati_sigma_a_obs 0.23 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.36 _refine_analyze.Luzzati_sigma_a_free 0.26 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2838 _refine_hist.pdbx_number_atoms_nucleic_acid 320 _refine_hist.pdbx_number_atoms_ligand 33 _refine_hist.number_atoms_solvent 272 _refine_hist.number_atoms_total 3463 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 36.68 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 22.4 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.10 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.43 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.41 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 2.25 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.30 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.20 _refine_ls_shell.d_res_low 2.34 _refine_ls_shell.number_reflns_R_work 4031 _refine_ls_shell.R_factor_R_work 0.273 _refine_ls_shell.percent_reflns_obs 89.9 _refine_ls_shell.R_factor_R_free 0.301 _refine_ls_shell.R_factor_R_free_error 0.015 _refine_ls_shell.percent_reflns_R_free 8.6 _refine_ls_shell.number_reflns_R_free 381 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 4031 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 dna-rna_rep.param dna-rna_rep.top 'X-RAY DIFFRACTION' 3 water_rep.param water_rep.top 'X-RAY DIFFRACTION' 4 ion.param ion.top 'X-RAY DIFFRACTION' 5 lig.par lig.top 'X-RAY DIFFRACTION' # _struct.entry_id 3H4D _struct.title 'Ternary complex of human DNA polymerase iota with template U/T and incoming dGTP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3H4D _struct_keywords.pdbx_keywords REPLICATION/DNA _struct_keywords.text ;DNA polymerase iota, replication, DNA damage, DNA repair, DNA replication, DNA synthesis, DNA-binding, DNA-directed DNA polymerase, Magnesium, Metal-binding, Mutator protein, Nucleotidyltransferase, Nucleus, Schiff base, Transferase, REPLICATION-DNA COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 6 ? H N N 6 ? I N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 CYS A 13 ? ASN A 23 ? CYS A 37 ASN A 47 1 ? 11 HELX_P HELX_P2 2 PRO A 24 ? LYS A 27 ? PRO A 48 LYS A 51 5 ? 4 HELX_P HELX_P3 3 ASN A 43 ? LEU A 49 ? ASN A 67 LEU A 73 1 ? 7 HELX_P HELX_P4 4 VAL A 57 ? GLU A 62 ? VAL A 81 GLU A 86 1 ? 6 HELX_P HELX_P5 5 LEU A 75 ? SER A 93 ? LEU A 99 SER A 117 1 ? 19 HELX_P HELX_P6 6 LEU A 108 ? LEU A 119 ? LEU A 132 LEU A 143 1 ? 12 HELX_P HELX_P7 8 ASN A 135 ? GLN A 137 ? ASN A 159 GLN A 161 5 ? 3 HELX_P HELX_P8 9 ASP A 143 ? GLY A 168 ? ASP A 167 GLY A 192 1 ? 26 HELX_P HELX_P9 10 ASN A 178 ? GLY A 187 ? ASN A 202 GLY A 211 1 ? 10 HELX_P HELX_P10 11 LEU A 198 ? GLU A 200 ? LEU A 222 GLU A 224 5 ? 3 HELX_P HELX_P11 12 SER A 201 ? SER A 208 ? SER A 225 SER A 232 1 ? 8 HELX_P HELX_P12 13 HIS A 211 ? ILE A 215 ? HIS A 235 ILE A 239 5 ? 5 HELX_P HELX_P13 14 GLY A 219 ? ALA A 228 ? GLY A 243 ALA A 252 1 ? 10 HELX_P HELX_P14 15 SER A 233 ? PHE A 240 ? SER A 257 PHE A 264 1 ? 8 HELX_P HELX_P15 16 SER A 241 ? GLY A 250 ? SER A 265 GLY A 274 1 ? 10 HELX_P HELX_P16 17 GLY A 250 ? PHE A 262 ? GLY A 274 PHE A 286 1 ? 13 HELX_P HELX_P17 18 LYS A 294 ? GLY A 312 ? LYS A 318 GLY A 336 1 ? 19 HELX_P HELX_P18 19 PRO A 341 ? GLN A 346 ? PRO A 365 GLN A 370 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DC 6 "O3'" ? ? ? 1_555 B DOC 7 P ? ? P DC 872 P DOC 873 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale2 covale both ? C DT 1 "O3'" ? ? ? 1_555 C BRU 2 P A ? T DT 839 T BRU 840 1_555 ? ? ? ? ? ? ? 1.612 ? ? covale3 covale both ? C DT 1 "O3'" ? ? ? 1_555 C BRU 2 P B ? T DT 839 T BRU 840 1_555 ? ? ? ? ? ? ? 1.614 ? ? covale4 covale both ? C BRU 2 "O3'" A ? ? 1_555 C DG 3 P ? ? T BRU 840 T DG 841 1_555 ? ? ? ? ? ? ? 1.605 ? ? covale5 covale both ? C BRU 2 "O3'" B ? ? 1_555 C DG 3 P ? ? T BRU 840 T DG 841 1_555 ? ? ? ? ? ? ? 1.608 ? ? hydrog1 hydrog ? ? B DA 1 N1 ? ? ? 1_555 C DT 9 N3 ? ? P DA 867 T DT 847 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DA 1 N6 ? ? ? 1_555 C DT 9 O4 ? ? P DA 867 T DT 847 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 2 N1 ? ? ? 1_555 C DC 8 N3 ? ? P DG 868 T DC 846 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DG 2 N2 ? ? ? 1_555 C DC 8 O2 ? ? P DG 868 T DC 846 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DG 2 O6 ? ? ? 1_555 C DC 8 N4 ? ? P DG 868 T DC 846 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DG 3 N1 ? ? ? 1_555 C DC 7 N3 ? ? P DG 869 T DC 845 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DG 3 N2 ? ? ? 1_555 C DC 7 O2 ? ? P DG 869 T DC 845 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 3 O6 ? ? ? 1_555 C DC 7 N4 ? ? P DG 869 T DC 845 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DA 4 N1 ? ? ? 1_555 C DT 6 N3 ? ? P DA 870 T DT 844 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DA 4 N6 ? ? ? 1_555 C DT 6 O4 ? ? P DA 870 T DT 844 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DC 5 N3 ? ? ? 1_555 C DG 5 N1 ? ? P DC 871 T DG 843 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 5 N4 ? ? ? 1_555 C DG 5 O6 ? ? P DC 871 T DG 843 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DC 5 O2 ? ? ? 1_555 C DG 5 N2 ? ? P DC 871 T DG 843 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 6 N3 ? ? ? 1_555 C DG 4 N1 ? ? P DC 872 T DG 842 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DC 6 N4 ? ? ? 1_555 C DG 4 O6 ? ? P DC 872 T DG 842 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DC 6 O2 ? ? ? 1_555 C DG 4 N2 ? ? P DC 872 T DG 842 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DOC 7 N3 ? ? ? 1_555 C DG 3 N1 ? ? P DOC 873 T DG 841 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DOC 7 N4 ? ? ? 1_555 C DG 3 O6 ? ? P DOC 873 T DG 841 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DOC 7 O2 ? ? ? 1_555 C DG 3 N2 ? ? P DOC 873 T DG 841 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 4 ? C ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 96 ? LEU A 99 ? VAL A 120 LEU A 123 A 2 GLU A 103 ? ASP A 107 ? GLU A 127 ASP A 131 A 3 ILE A 6 ? LEU A 11 ? ILE A 30 LEU A 35 A 4 GLY A 171 ? ALA A 176 ? GLY A 195 ALA A 200 A 5 GLN A 194 ? VAL A 196 ? GLN A 218 VAL A 220 A 6 HIS A 132 ? VAL A 133 ? HIS A 156 VAL A 157 B 1 MET A 55 ? ASN A 56 ? MET A 79 ASN A 80 B 2 LEU A 38 ? CYS A 42 ? LEU A 62 CYS A 66 B 3 LEU A 31 ? GLN A 35 ? LEU A 55 GLN A 59 B 4 VAL A 68 ? ASN A 71 ? VAL A 92 ASN A 95 C 1 SER A 277 ? GLU A 280 ? SER A 301 GLU A 304 C 2 LEU A 382 ? LYS A 390 ? LEU A 406 LYS A 414 C 3 LYS A 314 ? ILE A 322 ? LYS A 338 ILE A 346 C 4 GLU A 334 ? PRO A 339 ? GLU A 358 PRO A 363 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 99 ? N LEU A 123 O GLU A 103 ? O GLU A 127 A 2 3 O ASN A 104 ? O ASN A 128 N VAL A 9 ? N VAL A 33 A 3 4 N ASP A 10 ? N ASP A 34 O CYS A 172 ? O CYS A 196 A 4 5 N VAL A 175 ? N VAL A 199 O THR A 195 ? O THR A 219 A 5 6 O GLN A 194 ? O GLN A 218 N HIS A 132 ? N HIS A 156 B 1 2 O MET A 55 ? O MET A 79 N VAL A 39 ? N VAL A 63 B 2 3 O THR A 41 ? O THR A 65 N VAL A 33 ? N VAL A 57 B 3 4 N GLN A 34 ? N GLN A 58 O VAL A 70 ? O VAL A 94 C 1 2 N PHE A 278 ? N PHE A 302 O PHE A 386 ? O PHE A 410 C 2 3 O LYS A 390 ? O LYS A 414 N LYS A 314 ? N LYS A 338 C 3 4 N VAL A 318 ? N VAL A 342 O CYS A 338 ? O CYS A 362 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 871 ? 5 'BINDING SITE FOR RESIDUE MG A 871' AC2 Software A MG 872 ? 6 'BINDING SITE FOR RESIDUE MG A 872' AC3 Software T DGT 875 ? 26 'BINDING SITE FOR RESIDUE DGT T 875' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ASP A 10 ? ASP A 34 . ? 1_555 ? 2 AC1 5 LEU A 11 ? LEU A 35 . ? 1_555 ? 3 AC1 5 ASP A 102 ? ASP A 126 . ? 1_555 ? 4 AC1 5 MG E . ? MG A 872 . ? 1_555 ? 5 AC1 5 DGT F . ? DGT T 875 . ? 1_555 ? 6 AC2 6 ASP A 10 ? ASP A 34 . ? 1_555 ? 7 AC2 6 ASP A 102 ? ASP A 126 . ? 1_555 ? 8 AC2 6 GLU A 103 ? GLU A 127 . ? 1_555 ? 9 AC2 6 MG D . ? MG A 871 . ? 1_555 ? 10 AC2 6 DOC B 7 ? DOC P 873 . ? 1_555 ? 11 AC2 6 DGT F . ? DGT T 875 . ? 1_555 ? 12 AC3 26 ASP A 10 ? ASP A 34 . ? 1_555 ? 13 AC3 26 LEU A 11 ? LEU A 35 . ? 1_555 ? 14 AC3 26 ASP A 12 ? ASP A 36 . ? 1_555 ? 15 AC3 26 CYS A 13 ? CYS A 37 . ? 1_555 ? 16 AC3 26 PHE A 14 ? PHE A 38 . ? 1_555 ? 17 AC3 26 TYR A 15 ? TYR A 39 . ? 1_555 ? 18 AC3 26 GLN A 35 ? GLN A 59 . ? 1_555 ? 19 AC3 26 VAL A 40 ? VAL A 64 . ? 1_555 ? 20 AC3 26 THR A 41 ? THR A 65 . ? 1_555 ? 21 AC3 26 TYR A 44 ? TYR A 68 . ? 1_555 ? 22 AC3 26 ARG A 47 ? ARG A 71 . ? 1_555 ? 23 AC3 26 LYS A 53 ? LYS A 77 . ? 1_555 ? 24 AC3 26 ASP A 102 ? ASP A 126 . ? 1_555 ? 25 AC3 26 LYS A 190 ? LYS A 214 . ? 1_555 ? 26 AC3 26 HOH G . ? HOH A 452 . ? 1_555 ? 27 AC3 26 HOH G . ? HOH A 475 . ? 1_555 ? 28 AC3 26 HOH G . ? HOH A 557 . ? 1_555 ? 29 AC3 26 HOH G . ? HOH A 577 . ? 1_555 ? 30 AC3 26 MG D . ? MG A 871 . ? 1_555 ? 31 AC3 26 MG E . ? MG A 872 . ? 1_555 ? 32 AC3 26 DOC B 7 ? DOC P 873 . ? 1_555 ? 33 AC3 26 HOH I . ? HOH T 19 . ? 1_555 ? 34 AC3 26 HOH I . ? HOH T 173 . ? 1_555 ? 35 AC3 26 HOH I . ? HOH T 234 . ? 1_555 ? 36 AC3 26 BRU C 2 ? BRU T 840 . ? 1_555 ? 37 AC3 26 DG C 3 ? DG T 841 . ? 1_555 ? # _database_PDB_matrix.entry_id 3H4D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3H4D _atom_sites.fract_transf_matrix[1][1] 0.010213 _atom_sites.fract_transf_matrix[1][2] 0.005896 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011793 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004917 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BR C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 25 25 ALA ALA A . n A 1 2 SER 2 26 26 SER SER A . n A 1 3 SER 3 27 27 SER SER A . n A 1 4 ARG 4 28 28 ARG ARG A . n A 1 5 VAL 5 29 29 VAL VAL A . n A 1 6 ILE 6 30 30 ILE ILE A . n A 1 7 VAL 7 31 31 VAL VAL A . n A 1 8 HIS 8 32 32 HIS HIS A . n A 1 9 VAL 9 33 33 VAL VAL A . n A 1 10 ASP 10 34 34 ASP ASP A . n A 1 11 LEU 11 35 35 LEU LEU A . n A 1 12 ASP 12 36 36 ASP ASP A . n A 1 13 CYS 13 37 37 CYS CYS A . n A 1 14 PHE 14 38 38 PHE PHE A . n A 1 15 TYR 15 39 39 TYR TYR A . n A 1 16 ALA 16 40 40 ALA ALA A . n A 1 17 GLN 17 41 41 GLN GLN A . n A 1 18 VAL 18 42 42 VAL VAL A . n A 1 19 GLU 19 43 43 GLU GLU A . n A 1 20 MET 20 44 44 MET MET A . n A 1 21 ILE 21 45 45 ILE ILE A . n A 1 22 SER 22 46 46 SER SER A . n A 1 23 ASN 23 47 47 ASN ASN A . n A 1 24 PRO 24 48 48 PRO PRO A . n A 1 25 GLU 25 49 49 GLU GLU A . n A 1 26 LEU 26 50 50 LEU LEU A . n A 1 27 LYS 27 51 51 LYS LYS A . n A 1 28 ASP 28 52 52 ASP ASP A . n A 1 29 LYS 29 53 53 LYS LYS A . n A 1 30 PRO 30 54 54 PRO PRO A . n A 1 31 LEU 31 55 55 LEU LEU A . n A 1 32 GLY 32 56 56 GLY GLY A . n A 1 33 VAL 33 57 57 VAL VAL A . n A 1 34 GLN 34 58 58 GLN GLN A . n A 1 35 GLN 35 59 59 GLN GLN A . n A 1 36 LYS 36 60 60 LYS LYS A . n A 1 37 TYR 37 61 61 TYR TYR A . n A 1 38 LEU 38 62 62 LEU LEU A . n A 1 39 VAL 39 63 63 VAL VAL A . n A 1 40 VAL 40 64 64 VAL VAL A . n A 1 41 THR 41 65 65 THR THR A . n A 1 42 CYS 42 66 66 CYS CYS A . n A 1 43 ASN 43 67 67 ASN ASN A . n A 1 44 TYR 44 68 68 TYR TYR A . n A 1 45 GLU 45 69 69 GLU GLU A . n A 1 46 ALA 46 70 70 ALA ALA A . n A 1 47 ARG 47 71 71 ARG ARG A . n A 1 48 LYS 48 72 72 LYS LYS A . n A 1 49 LEU 49 73 73 LEU LEU A . n A 1 50 GLY 50 74 74 GLY GLY A . n A 1 51 VAL 51 75 75 VAL VAL A . n A 1 52 LYS 52 76 76 LYS LYS A . n A 1 53 LYS 53 77 77 LYS LYS A . n A 1 54 LEU 54 78 78 LEU LEU A . n A 1 55 MET 55 79 79 MET MET A . n A 1 56 ASN 56 80 80 ASN ASN A . n A 1 57 VAL 57 81 81 VAL VAL A . n A 1 58 ARG 58 82 82 ARG ARG A . n A 1 59 ASP 59 83 83 ASP ASP A . n A 1 60 ALA 60 84 84 ALA ALA A . n A 1 61 LYS 61 85 85 LYS LYS A . n A 1 62 GLU 62 86 86 GLU GLU A . n A 1 63 LYS 63 87 87 LYS LYS A . n A 1 64 CYS 64 88 88 CYS CYS A . n A 1 65 PRO 65 89 89 PRO PRO A . n A 1 66 GLN 66 90 90 GLN GLN A . n A 1 67 LEU 67 91 91 LEU LEU A . n A 1 68 VAL 68 92 92 VAL VAL A . n A 1 69 LEU 69 93 93 LEU LEU A . n A 1 70 VAL 70 94 94 VAL VAL A . n A 1 71 ASN 71 95 95 ASN ASN A . n A 1 72 GLY 72 96 96 GLY GLY A . n A 1 73 GLU 73 97 97 GLU GLU A . n A 1 74 ASP 74 98 98 ASP ASP A . n A 1 75 LEU 75 99 99 LEU LEU A . n A 1 76 THR 76 100 100 THR THR A . n A 1 77 ARG 77 101 101 ARG ARG A . n A 1 78 TYR 78 102 102 TYR TYR A . n A 1 79 ARG 79 103 103 ARG ARG A . n A 1 80 GLU 80 104 104 GLU GLU A . n A 1 81 MET 81 105 105 MET MET A . n A 1 82 SER 82 106 106 SER SER A . n A 1 83 TYR 83 107 107 TYR TYR A . n A 1 84 LYS 84 108 108 LYS LYS A . n A 1 85 VAL 85 109 109 VAL VAL A . n A 1 86 THR 86 110 110 THR THR A . n A 1 87 GLU 87 111 111 GLU GLU A . n A 1 88 LEU 88 112 112 LEU LEU A . n A 1 89 LEU 89 113 113 LEU LEU A . n A 1 90 GLU 90 114 114 GLU GLU A . n A 1 91 GLU 91 115 115 GLU GLU A . n A 1 92 PHE 92 116 116 PHE PHE A . n A 1 93 SER 93 117 117 SER SER A . n A 1 94 PRO 94 118 118 PRO PRO A . n A 1 95 VAL 95 119 119 VAL VAL A . n A 1 96 VAL 96 120 120 VAL VAL A . n A 1 97 GLU 97 121 121 GLU GLU A . n A 1 98 ARG 98 122 122 ARG ARG A . n A 1 99 LEU 99 123 123 LEU LEU A . n A 1 100 GLY 100 124 124 GLY GLY A . n A 1 101 PHE 101 125 125 PHE PHE A . n A 1 102 ASP 102 126 126 ASP ASP A . n A 1 103 GLU 103 127 127 GLU GLU A . n A 1 104 ASN 104 128 128 ASN ASN A . n A 1 105 PHE 105 129 129 PHE PHE A . n A 1 106 VAL 106 130 130 VAL VAL A . n A 1 107 ASP 107 131 131 ASP ASP A . n A 1 108 LEU 108 132 132 LEU LEU A . n A 1 109 THR 109 133 133 THR THR A . n A 1 110 GLU 110 134 134 GLU GLU A . n A 1 111 MET 111 135 135 MET MET A . n A 1 112 VAL 112 136 136 VAL VAL A . n A 1 113 GLU 113 137 137 GLU GLU A . n A 1 114 LYS 114 138 138 LYS LYS A . n A 1 115 ARG 115 139 139 ARG ARG A . n A 1 116 LEU 116 140 140 LEU LEU A . n A 1 117 GLN 117 141 141 GLN GLN A . n A 1 118 GLN 118 142 142 GLN GLN A . n A 1 119 LEU 119 143 143 LEU LEU A . n A 1 120 GLN 120 144 144 GLN GLN A . n A 1 121 SER 121 145 145 SER SER A . n A 1 122 ASP 122 146 146 ASP ALA A . n A 1 123 GLU 123 147 147 GLU GLU A . n A 1 124 LEU 124 148 148 LEU LEU A . n A 1 125 SER 125 149 149 SER SER A . n A 1 126 ALA 126 150 150 ALA ALA A . n A 1 127 VAL 127 151 151 VAL VAL A . n A 1 128 THR 128 152 152 THR THR A . n A 1 129 VAL 129 153 153 VAL VAL A . n A 1 130 SER 130 154 154 SER SER A . n A 1 131 GLY 131 155 155 GLY GLY A . n A 1 132 HIS 132 156 156 HIS HIS A . n A 1 133 VAL 133 157 157 VAL VAL A . n A 1 134 TYR 134 158 158 TYR TYR A . n A 1 135 ASN 135 159 159 ASN ASN A . n A 1 136 ASN 136 160 160 ASN ASN A . n A 1 137 GLN 137 161 161 GLN GLN A . n A 1 138 SER 138 162 162 SER SER A . n A 1 139 ILE 139 163 163 ILE ILE A . n A 1 140 ASN 140 164 164 ASN ASN A . n A 1 141 LEU 141 165 165 LEU LEU A . n A 1 142 LEU 142 166 166 LEU LEU A . n A 1 143 ASP 143 167 167 ASP ASP A . n A 1 144 VAL 144 168 168 VAL VAL A . n A 1 145 LEU 145 169 169 LEU LEU A . n A 1 146 HIS 146 170 170 HIS HIS A . n A 1 147 ILE 147 171 171 ILE ILE A . n A 1 148 ARG 148 172 172 ARG ARG A . n A 1 149 LEU 149 173 173 LEU LEU A . n A 1 150 LEU 150 174 174 LEU LEU A . n A 1 151 VAL 151 175 175 VAL VAL A . n A 1 152 GLY 152 176 176 GLY GLY A . n A 1 153 SER 153 177 177 SER SER A . n A 1 154 GLN 154 178 178 GLN GLN A . n A 1 155 ILE 155 179 179 ILE ILE A . n A 1 156 ALA 156 180 180 ALA ALA A . n A 1 157 ALA 157 181 181 ALA ALA A . n A 1 158 GLU 158 182 182 GLU GLU A . n A 1 159 MET 159 183 183 MET MET A . n A 1 160 ARG 160 184 184 ARG ARG A . n A 1 161 GLU 161 185 185 GLU GLU A . n A 1 162 ALA 162 186 186 ALA ALA A . n A 1 163 MET 163 187 187 MET MET A . n A 1 164 TYR 164 188 188 TYR TYR A . n A 1 165 ASN 165 189 189 ASN ASN A . n A 1 166 GLN 166 190 190 GLN GLN A . n A 1 167 LEU 167 191 191 LEU LEU A . n A 1 168 GLY 168 192 192 GLY GLY A . n A 1 169 LEU 169 193 193 LEU LEU A . n A 1 170 THR 170 194 194 THR THR A . n A 1 171 GLY 171 195 195 GLY GLY A . n A 1 172 CYS 172 196 196 CYS CYS A . n A 1 173 ALA 173 197 197 ALA ALA A . n A 1 174 GLY 174 198 198 GLY GLY A . n A 1 175 VAL 175 199 199 VAL VAL A . n A 1 176 ALA 176 200 200 ALA ALA A . n A 1 177 SER 177 201 201 SER SER A . n A 1 178 ASN 178 202 202 ASN ASN A . n A 1 179 LYS 179 203 203 LYS LYS A . n A 1 180 LEU 180 204 204 LEU LEU A . n A 1 181 LEU 181 205 205 LEU LEU A . n A 1 182 ALA 182 206 206 ALA ALA A . n A 1 183 LYS 183 207 207 LYS LYS A . n A 1 184 LEU 184 208 208 LEU LEU A . n A 1 185 VAL 185 209 209 VAL VAL A . n A 1 186 SER 186 210 210 SER SER A . n A 1 187 GLY 187 211 211 GLY GLY A . n A 1 188 VAL 188 212 212 VAL VAL A . n A 1 189 PHE 189 213 213 PHE PHE A . n A 1 190 LYS 190 214 214 LYS LYS A . n A 1 191 PRO 191 215 215 PRO PRO A . n A 1 192 ASN 192 216 216 ASN ASN A . n A 1 193 GLN 193 217 217 GLN GLN A . n A 1 194 GLN 194 218 218 GLN GLN A . n A 1 195 THR 195 219 219 THR THR A . n A 1 196 VAL 196 220 220 VAL VAL A . n A 1 197 LEU 197 221 221 LEU LEU A . n A 1 198 LEU 198 222 222 LEU LEU A . n A 1 199 PRO 199 223 223 PRO PRO A . n A 1 200 GLU 200 224 224 GLU GLU A . n A 1 201 SER 201 225 225 SER SER A . n A 1 202 CYS 202 226 226 CYS CYS A . n A 1 203 GLN 203 227 227 GLN GLN A . n A 1 204 HIS 204 228 228 HIS HIS A . n A 1 205 LEU 205 229 229 LEU LEU A . n A 1 206 ILE 206 230 230 ILE ILE A . n A 1 207 HIS 207 231 231 HIS HIS A . n A 1 208 SER 208 232 232 SER SER A . n A 1 209 LEU 209 233 233 LEU LEU A . n A 1 210 ASN 210 234 234 ASN ASN A . n A 1 211 HIS 211 235 235 HIS HIS A . n A 1 212 ILE 212 236 236 ILE ILE A . n A 1 213 LYS 213 237 237 LYS LYS A . n A 1 214 GLU 214 238 238 GLU GLU A . n A 1 215 ILE 215 239 239 ILE ILE A . n A 1 216 PRO 216 240 240 PRO PRO A . n A 1 217 GLY 217 241 241 GLY GLY A . n A 1 218 ILE 218 242 242 ILE ILE A . n A 1 219 GLY 219 243 243 GLY GLY A . n A 1 220 TYR 220 244 244 TYR TYR A . n A 1 221 LYS 221 245 245 LYS LYS A . n A 1 222 THR 222 246 246 THR THR A . n A 1 223 ALA 223 247 247 ALA ALA A . n A 1 224 LYS 224 248 248 LYS LYS A . n A 1 225 CYS 225 249 249 CYS CYS A . n A 1 226 LEU 226 250 250 LEU LEU A . n A 1 227 GLU 227 251 251 GLU GLU A . n A 1 228 ALA 228 252 252 ALA ALA A . n A 1 229 LEU 229 253 253 LEU LEU A . n A 1 230 GLY 230 254 254 GLY GLY A . n A 1 231 ILE 231 255 255 ILE ILE A . n A 1 232 ASN 232 256 256 ASN ASN A . n A 1 233 SER 233 257 257 SER SER A . n A 1 234 VAL 234 258 258 VAL VAL A . n A 1 235 ARG 235 259 259 ARG ARG A . n A 1 236 ASP 236 260 260 ASP ASP A . n A 1 237 LEU 237 261 261 LEU LEU A . n A 1 238 GLN 238 262 262 GLN GLN A . n A 1 239 THR 239 263 263 THR THR A . n A 1 240 PHE 240 264 264 PHE PHE A . n A 1 241 SER 241 265 265 SER SER A . n A 1 242 PRO 242 266 266 PRO PRO A . n A 1 243 LYS 243 267 267 LYS LYS A . n A 1 244 ILE 244 268 268 ILE ILE A . n A 1 245 LEU 245 269 269 LEU LEU A . n A 1 246 GLU 246 270 270 GLU GLU A . n A 1 247 LYS 247 271 271 LYS LYS A . n A 1 248 GLU 248 272 272 GLU GLU A . n A 1 249 LEU 249 273 273 LEU LEU A . n A 1 250 GLY 250 274 274 GLY GLY A . n A 1 251 ILE 251 275 275 ILE ILE A . n A 1 252 SER 252 276 276 SER SER A . n A 1 253 VAL 253 277 277 VAL VAL A . n A 1 254 ALA 254 278 278 ALA ALA A . n A 1 255 GLN 255 279 279 GLN GLN A . n A 1 256 ARG 256 280 280 ARG ARG A . n A 1 257 ILE 257 281 281 ILE ILE A . n A 1 258 GLN 258 282 282 GLN GLN A . n A 1 259 LYS 259 283 283 LYS LYS A . n A 1 260 LEU 260 284 284 LEU LEU A . n A 1 261 SER 261 285 285 SER SER A . n A 1 262 PHE 262 286 286 PHE PHE A . n A 1 263 GLY 263 287 287 GLY GLY A . n A 1 264 GLU 264 288 288 GLU GLU A . n A 1 265 ASP 265 289 289 ASP ASP A . n A 1 266 ASN 266 290 290 ASN ASN A . n A 1 267 SER 267 291 291 SER SER A . n A 1 268 PRO 268 292 292 PRO PRO A . n A 1 269 VAL 269 293 293 VAL VAL A . n A 1 270 ILE 270 294 294 ILE ILE A . n A 1 271 LEU 271 295 295 LEU LEU A . n A 1 272 SER 272 296 296 SER SER A . n A 1 273 GLY 273 297 297 GLY GLY A . n A 1 274 PRO 274 298 298 PRO PRO A . n A 1 275 PRO 275 299 299 PRO PRO A . n A 1 276 GLN 276 300 300 GLN GLN A . n A 1 277 SER 277 301 301 SER SER A . n A 1 278 PHE 278 302 302 PHE PHE A . n A 1 279 SER 279 303 303 SER SER A . n A 1 280 GLU 280 304 304 GLU GLU A . n A 1 281 GLU 281 305 305 GLU GLU A . n A 1 282 ASP 282 306 306 ASP ASP A . n A 1 283 SER 283 307 307 SER SER A . n A 1 284 PHE 284 308 308 PHE PHE A . n A 1 285 LYS 285 309 309 LYS LYS A . n A 1 286 LYS 286 310 310 LYS LYS A . n A 1 287 CYS 287 311 311 CYS CYS A . n A 1 288 SER 288 312 312 SER SER A . n A 1 289 SER 289 313 313 SER SER A . n A 1 290 GLU 290 314 314 GLU GLU A . n A 1 291 VAL 291 315 315 VAL VAL A . n A 1 292 GLU 292 316 316 GLU GLU A . n A 1 293 ALA 293 317 317 ALA ALA A . n A 1 294 LYS 294 318 318 LYS LYS A . n A 1 295 ASN 295 319 319 ASN ASN A . n A 1 296 LYS 296 320 320 LYS LYS A . n A 1 297 ILE 297 321 321 ILE ILE A . n A 1 298 GLU 298 322 322 GLU GLU A . n A 1 299 GLU 299 323 323 GLU GLU A . n A 1 300 LEU 300 324 324 LEU LEU A . n A 1 301 LEU 301 325 325 LEU LEU A . n A 1 302 ALA 302 326 326 ALA ALA A . n A 1 303 SER 303 327 327 SER SER A . n A 1 304 LEU 304 328 328 LEU LEU A . n A 1 305 LEU 305 329 329 LEU LEU A . n A 1 306 ASN 306 330 330 ASN ASN A . n A 1 307 ARG 307 331 331 ARG ARG A . n A 1 308 VAL 308 332 332 VAL VAL A . n A 1 309 CYS 309 333 333 CYS CYS A . n A 1 310 GLN 310 334 334 GLN GLN A . n A 1 311 ASP 311 335 335 ASP ASP A . n A 1 312 GLY 312 336 336 GLY GLY A . n A 1 313 ARG 313 337 337 ARG ARG A . n A 1 314 LYS 314 338 338 LYS LYS A . n A 1 315 PRO 315 339 339 PRO PRO A . n A 1 316 HIS 316 340 340 HIS HIS A . n A 1 317 THR 317 341 341 THR THR A . n A 1 318 VAL 318 342 342 VAL VAL A . n A 1 319 ARG 319 343 343 ARG ARG A . n A 1 320 LEU 320 344 344 LEU LEU A . n A 1 321 ILE 321 345 345 ILE ILE A . n A 1 322 ILE 322 346 346 ILE ILE A . n A 1 323 ARG 323 347 347 ARG ARG A . n A 1 324 ARG 324 348 348 ARG ARG A . n A 1 325 TYR 325 349 349 TYR TYR A . n A 1 326 SER 326 350 350 SER SER A . n A 1 327 SER 327 351 351 SER SER A . n A 1 328 GLU 328 352 352 GLU GLU A . n A 1 329 LYS 329 353 353 LYS LYS A . n A 1 330 HIS 330 354 354 HIS HIS A . n A 1 331 TYR 331 355 355 TYR TYR A . n A 1 332 GLY 332 356 356 GLY GLY A . n A 1 333 ARG 333 357 357 ARG ARG A . n A 1 334 GLU 334 358 358 GLU GLU A . n A 1 335 SER 335 359 359 SER SER A . n A 1 336 ARG 336 360 360 ARG ARG A . n A 1 337 GLN 337 361 361 GLN GLN A . n A 1 338 CYS 338 362 362 CYS CYS A . n A 1 339 PRO 339 363 363 PRO PRO A . n A 1 340 ILE 340 364 364 ILE ILE A . n A 1 341 PRO 341 365 365 PRO PRO A . n A 1 342 SER 342 366 366 SER SER A . n A 1 343 HIS 343 367 367 HIS ALA A . n A 1 344 VAL 344 368 368 VAL VAL A . n A 1 345 ILE 345 369 369 ILE ILE A . n A 1 346 GLN 346 370 370 GLN GLN A . n A 1 347 LYS 347 371 ? ? ? A . n A 1 348 LEU 348 372 ? ? ? A . n A 1 349 GLY 349 373 ? ? ? A . n A 1 350 THR 350 374 ? ? ? A . n A 1 351 GLY 351 375 ? ? ? A . n A 1 352 ASN 352 376 ? ? ? A . n A 1 353 TYR 353 377 ? ? ? A . n A 1 354 ASP 354 378 ? ? ? A . n A 1 355 VAL 355 379 379 VAL ALA A . n A 1 356 MET 356 380 380 MET MET A . n A 1 357 THR 357 381 381 THR THR A . n A 1 358 PRO 358 382 382 PRO PRO A . n A 1 359 MET 359 383 383 MET MET A . n A 1 360 VAL 360 384 384 VAL VAL A . n A 1 361 ASP 361 385 385 ASP ASP A . n A 1 362 ILE 362 386 386 ILE ALA A . n A 1 363 LEU 363 387 387 LEU LEU A . n A 1 364 MET 364 388 388 MET MET A . n A 1 365 LYS 365 389 389 LYS ALA A . n A 1 366 LEU 366 390 390 LEU LEU A . n A 1 367 PHE 367 391 391 PHE PHE A . n A 1 368 ARG 368 392 392 ARG ARG A . n A 1 369 ASN 369 393 393 ASN ASN A . n A 1 370 MET 370 394 394 MET MET A . n A 1 371 VAL 371 395 ? ? ? A . n A 1 372 ASN 372 396 ? ? ? A . n A 1 373 VAL 373 397 ? ? ? A . n A 1 374 LYS 374 398 ? ? ? A . n A 1 375 MET 375 399 ? ? ? A . n A 1 376 PRO 376 400 ? ? ? A . n A 1 377 PHE 377 401 ? ? ? A . n A 1 378 HIS 378 402 ? ? ? A . n A 1 379 LEU 379 403 ? ? ? A . n A 1 380 THR 380 404 404 THR THR A . n A 1 381 LEU 381 405 405 LEU ALA A . n A 1 382 LEU 382 406 406 LEU LEU A . n A 1 383 SER 383 407 407 SER SER A . n A 1 384 VAL 384 408 408 VAL VAL A . n A 1 385 CYS 385 409 409 CYS CYS A . n A 1 386 PHE 386 410 410 PHE PHE A . n A 1 387 CYS 387 411 411 CYS CYS A . n A 1 388 ASN 388 412 412 ASN ASN A . n A 1 389 LEU 389 413 413 LEU LEU A . n A 1 390 LYS 390 414 414 LYS LYS A . n B 2 1 DA 1 867 867 DA DA P . n B 2 2 DG 2 868 868 DG DG P . n B 2 3 DG 3 869 869 DG DG P . n B 2 4 DA 4 870 870 DA DA P . n B 2 5 DC 5 871 871 DC DC P . n B 2 6 DC 6 872 872 DC DC P . n B 2 7 DOC 7 873 873 DOC DOC P . n C 3 1 DT 1 839 839 DT DT T . n C 3 2 BRU 2 840 840 BRU BRU T . n C 3 3 DG 3 841 841 DG DG T . n C 3 4 DG 4 842 842 DG DG T . n C 3 5 DG 5 843 843 DG DG T . n C 3 6 DT 6 844 844 DT DT T . n C 3 7 DC 7 845 845 DC DC T . n C 3 8 DC 8 846 846 DC DC T . n C 3 9 DT 9 847 847 DT DT T . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 MG 1 871 871 MG MG A . E 4 MG 1 872 872 MG MG A . F 5 DGT 1 875 875 DGT DGT T . G 6 HOH 1 1 1 HOH HOH A . G 6 HOH 2 2 2 HOH HOH A . G 6 HOH 3 3 3 HOH HOH A . G 6 HOH 4 4 4 HOH HOH A . G 6 HOH 5 5 5 HOH HOH A . G 6 HOH 6 6 6 HOH HOH A . G 6 HOH 7 7 7 HOH HOH A . G 6 HOH 8 8 8 HOH HOH A . G 6 HOH 9 9 9 HOH HOH A . G 6 HOH 10 10 10 HOH HOH A . G 6 HOH 11 11 11 HOH HOH A . G 6 HOH 12 12 12 HOH HOH A . G 6 HOH 13 13 13 HOH HOH A . G 6 HOH 14 14 14 HOH HOH A . G 6 HOH 15 15 15 HOH HOH A . G 6 HOH 16 16 16 HOH HOH A . G 6 HOH 17 17 17 HOH HOH A . G 6 HOH 18 18 18 HOH HOH A . G 6 HOH 19 20 20 HOH HOH A . G 6 HOH 20 21 21 HOH HOH A . G 6 HOH 21 22 22 HOH HOH A . G 6 HOH 22 23 23 HOH HOH A . G 6 HOH 23 24 24 HOH HOH A . G 6 HOH 24 415 25 HOH HOH A . G 6 HOH 25 416 26 HOH HOH A . G 6 HOH 26 417 27 HOH HOH A . G 6 HOH 27 418 29 HOH HOH A . G 6 HOH 28 419 30 HOH HOH A . G 6 HOH 29 420 31 HOH HOH A . G 6 HOH 30 421 32 HOH HOH A . G 6 HOH 31 422 33 HOH HOH A . G 6 HOH 32 423 34 HOH HOH A . G 6 HOH 33 424 35 HOH HOH A . G 6 HOH 34 425 36 HOH HOH A . G 6 HOH 35 426 37 HOH HOH A . G 6 HOH 36 427 38 HOH HOH A . G 6 HOH 37 428 39 HOH HOH A . G 6 HOH 38 429 40 HOH HOH A . G 6 HOH 39 430 41 HOH HOH A . G 6 HOH 40 431 42 HOH HOH A . G 6 HOH 41 432 43 HOH HOH A . G 6 HOH 42 433 44 HOH HOH A . G 6 HOH 43 434 45 HOH HOH A . G 6 HOH 44 435 46 HOH HOH A . G 6 HOH 45 436 47 HOH HOH A . G 6 HOH 46 437 48 HOH HOH A . G 6 HOH 47 438 50 HOH HOH A . G 6 HOH 48 439 51 HOH HOH A . G 6 HOH 49 440 52 HOH HOH A . G 6 HOH 50 441 53 HOH HOH A . G 6 HOH 51 442 54 HOH HOH A . G 6 HOH 52 443 55 HOH HOH A . G 6 HOH 53 444 56 HOH HOH A . G 6 HOH 54 445 57 HOH HOH A . G 6 HOH 55 446 58 HOH HOH A . G 6 HOH 56 447 59 HOH HOH A . G 6 HOH 57 448 60 HOH HOH A . G 6 HOH 58 449 61 HOH HOH A . G 6 HOH 59 450 62 HOH HOH A . G 6 HOH 60 451 63 HOH HOH A . G 6 HOH 61 452 64 HOH HOH A . G 6 HOH 62 453 65 HOH HOH A . G 6 HOH 63 454 68 HOH HOH A . G 6 HOH 64 455 69 HOH HOH A . G 6 HOH 65 456 70 HOH HOH A . G 6 HOH 66 457 71 HOH HOH A . G 6 HOH 67 458 72 HOH HOH A . G 6 HOH 68 459 73 HOH HOH A . G 6 HOH 69 460 74 HOH HOH A . G 6 HOH 70 461 75 HOH HOH A . G 6 HOH 71 462 76 HOH HOH A . G 6 HOH 72 463 77 HOH HOH A . G 6 HOH 73 464 78 HOH HOH A . G 6 HOH 74 465 80 HOH HOH A . G 6 HOH 75 466 81 HOH HOH A . G 6 HOH 76 467 83 HOH HOH A . G 6 HOH 77 468 84 HOH HOH A . G 6 HOH 78 469 85 HOH HOH A . G 6 HOH 79 470 86 HOH HOH A . G 6 HOH 80 471 87 HOH HOH A . G 6 HOH 81 472 88 HOH HOH A . G 6 HOH 82 473 89 HOH HOH A . G 6 HOH 83 474 90 HOH HOH A . G 6 HOH 84 475 91 HOH HOH A . G 6 HOH 85 476 92 HOH HOH A . G 6 HOH 86 477 93 HOH HOH A . G 6 HOH 87 478 94 HOH HOH A . G 6 HOH 88 479 95 HOH HOH A . G 6 HOH 89 480 96 HOH HOH A . G 6 HOH 90 481 97 HOH HOH A . G 6 HOH 91 482 98 HOH HOH A . G 6 HOH 92 483 99 HOH HOH A . G 6 HOH 93 484 100 HOH HOH A . G 6 HOH 94 485 101 HOH HOH A . G 6 HOH 95 486 102 HOH HOH A . G 6 HOH 96 487 103 HOH HOH A . G 6 HOH 97 488 104 HOH HOH A . G 6 HOH 98 489 105 HOH HOH A . G 6 HOH 99 490 106 HOH HOH A . G 6 HOH 100 491 107 HOH HOH A . G 6 HOH 101 492 109 HOH HOH A . G 6 HOH 102 493 110 HOH HOH A . G 6 HOH 103 494 111 HOH HOH A . G 6 HOH 104 495 112 HOH HOH A . G 6 HOH 105 496 113 HOH HOH A . G 6 HOH 106 497 114 HOH HOH A . G 6 HOH 107 498 115 HOH HOH A . G 6 HOH 108 499 116 HOH HOH A . G 6 HOH 109 500 117 HOH HOH A . G 6 HOH 110 501 118 HOH HOH A . G 6 HOH 111 502 119 HOH HOH A . G 6 HOH 112 503 120 HOH HOH A . G 6 HOH 113 504 121 HOH HOH A . G 6 HOH 114 505 122 HOH HOH A . G 6 HOH 115 506 123 HOH HOH A . G 6 HOH 116 507 124 HOH HOH A . G 6 HOH 117 508 125 HOH HOH A . G 6 HOH 118 509 126 HOH HOH A . G 6 HOH 119 510 127 HOH HOH A . G 6 HOH 120 511 128 HOH HOH A . G 6 HOH 121 512 130 HOH HOH A . G 6 HOH 122 513 132 HOH HOH A . G 6 HOH 123 514 133 HOH HOH A . G 6 HOH 124 515 134 HOH HOH A . G 6 HOH 125 516 135 HOH HOH A . G 6 HOH 126 517 137 HOH HOH A . G 6 HOH 127 518 139 HOH HOH A . G 6 HOH 128 519 141 HOH HOH A . G 6 HOH 129 520 142 HOH HOH A . G 6 HOH 130 521 144 HOH HOH A . G 6 HOH 131 522 145 HOH HOH A . G 6 HOH 132 523 146 HOH HOH A . G 6 HOH 133 524 147 HOH HOH A . G 6 HOH 134 525 148 HOH HOH A . G 6 HOH 135 526 149 HOH HOH A . G 6 HOH 136 527 150 HOH HOH A . G 6 HOH 137 528 151 HOH HOH A . G 6 HOH 138 529 152 HOH HOH A . G 6 HOH 139 530 154 HOH HOH A . G 6 HOH 140 531 156 HOH HOH A . G 6 HOH 141 532 157 HOH HOH A . G 6 HOH 142 533 158 HOH HOH A . G 6 HOH 143 534 159 HOH HOH A . G 6 HOH 144 535 160 HOH HOH A . G 6 HOH 145 536 161 HOH HOH A . G 6 HOH 146 537 162 HOH HOH A . G 6 HOH 147 538 163 HOH HOH A . G 6 HOH 148 539 164 HOH HOH A . G 6 HOH 149 540 165 HOH HOH A . G 6 HOH 150 541 166 HOH HOH A . G 6 HOH 151 542 167 HOH HOH A . G 6 HOH 152 543 168 HOH HOH A . G 6 HOH 153 544 169 HOH HOH A . G 6 HOH 154 545 170 HOH HOH A . G 6 HOH 155 546 171 HOH HOH A . G 6 HOH 156 547 172 HOH HOH A . G 6 HOH 157 548 175 HOH HOH A . G 6 HOH 158 549 177 HOH HOH A . G 6 HOH 159 550 178 HOH HOH A . G 6 HOH 160 551 179 HOH HOH A . G 6 HOH 161 552 180 HOH HOH A . G 6 HOH 162 553 181 HOH HOH A . G 6 HOH 163 554 182 HOH HOH A . G 6 HOH 164 555 184 HOH HOH A . G 6 HOH 165 556 185 HOH HOH A . G 6 HOH 166 557 186 HOH HOH A . G 6 HOH 167 558 187 HOH HOH A . G 6 HOH 168 559 188 HOH HOH A . G 6 HOH 169 560 189 HOH HOH A . G 6 HOH 170 561 190 HOH HOH A . G 6 HOH 171 562 191 HOH HOH A . G 6 HOH 172 563 192 HOH HOH A . G 6 HOH 173 564 193 HOH HOH A . G 6 HOH 174 565 194 HOH HOH A . G 6 HOH 175 566 196 HOH HOH A . G 6 HOH 176 567 197 HOH HOH A . G 6 HOH 177 568 198 HOH HOH A . G 6 HOH 178 569 199 HOH HOH A . G 6 HOH 179 570 201 HOH HOH A . G 6 HOH 180 571 202 HOH HOH A . G 6 HOH 181 572 203 HOH HOH A . G 6 HOH 182 573 204 HOH HOH A . G 6 HOH 183 574 205 HOH HOH A . G 6 HOH 184 575 206 HOH HOH A . G 6 HOH 185 576 207 HOH HOH A . G 6 HOH 186 577 208 HOH HOH A . G 6 HOH 187 578 209 HOH HOH A . G 6 HOH 188 579 210 HOH HOH A . G 6 HOH 189 580 212 HOH HOH A . G 6 HOH 190 581 213 HOH HOH A . G 6 HOH 191 582 215 HOH HOH A . G 6 HOH 192 583 216 HOH HOH A . G 6 HOH 193 584 217 HOH HOH A . G 6 HOH 194 585 218 HOH HOH A . G 6 HOH 195 586 219 HOH HOH A . G 6 HOH 196 587 220 HOH HOH A . G 6 HOH 197 588 222 HOH HOH A . G 6 HOH 198 589 225 HOH HOH A . G 6 HOH 199 590 226 HOH HOH A . G 6 HOH 200 591 227 HOH HOH A . G 6 HOH 201 592 228 HOH HOH A . G 6 HOH 202 593 229 HOH HOH A . G 6 HOH 203 594 230 HOH HOH A . G 6 HOH 204 595 231 HOH HOH A . G 6 HOH 205 596 232 HOH HOH A . G 6 HOH 206 597 233 HOH HOH A . G 6 HOH 207 598 235 HOH HOH A . G 6 HOH 208 599 237 HOH HOH A . G 6 HOH 209 600 238 HOH HOH A . G 6 HOH 210 601 239 HOH HOH A . G 6 HOH 211 602 240 HOH HOH A . G 6 HOH 212 603 241 HOH HOH A . G 6 HOH 213 604 242 HOH HOH A . G 6 HOH 214 605 243 HOH HOH A . G 6 HOH 215 606 244 HOH HOH A . G 6 HOH 216 607 245 HOH HOH A . G 6 HOH 217 608 246 HOH HOH A . G 6 HOH 218 609 247 HOH HOH A . G 6 HOH 219 610 248 HOH HOH A . G 6 HOH 220 611 249 HOH HOH A . G 6 HOH 221 612 250 HOH HOH A . G 6 HOH 222 613 251 HOH HOH A . G 6 HOH 223 614 252 HOH HOH A . G 6 HOH 224 615 253 HOH HOH A . G 6 HOH 225 616 254 HOH HOH A . G 6 HOH 226 617 255 HOH HOH A . G 6 HOH 227 618 256 HOH HOH A . G 6 HOH 228 619 257 HOH HOH A . G 6 HOH 229 620 259 HOH HOH A . G 6 HOH 230 621 260 HOH HOH A . G 6 HOH 231 622 261 HOH HOH A . G 6 HOH 232 623 263 HOH HOH A . G 6 HOH 233 624 264 HOH HOH A . G 6 HOH 234 625 265 HOH HOH A . G 6 HOH 235 626 266 HOH HOH A . G 6 HOH 236 627 267 HOH HOH A . G 6 HOH 237 628 269 HOH HOH A . G 6 HOH 238 629 270 HOH HOH A . G 6 HOH 239 630 271 HOH HOH A . G 6 HOH 240 631 272 HOH HOH A . H 6 HOH 1 108 108 HOH HOH P . H 6 HOH 2 129 129 HOH HOH P . H 6 HOH 3 131 131 HOH HOH P . H 6 HOH 4 138 138 HOH HOH P . H 6 HOH 5 174 174 HOH HOH P . H 6 HOH 6 183 183 HOH HOH P . H 6 HOH 7 200 200 HOH HOH P . H 6 HOH 8 211 211 HOH HOH P . H 6 HOH 9 224 224 HOH HOH P . I 6 HOH 1 19 19 HOH HOH T . I 6 HOH 2 28 28 HOH HOH T . I 6 HOH 3 49 49 HOH HOH T . I 6 HOH 4 66 66 HOH HOH T . I 6 HOH 5 67 67 HOH HOH T . I 6 HOH 6 79 79 HOH HOH T . I 6 HOH 7 82 82 HOH HOH T . I 6 HOH 8 136 136 HOH HOH T . I 6 HOH 9 140 140 HOH HOH T . I 6 HOH 10 143 143 HOH HOH T . I 6 HOH 11 153 153 HOH HOH T . I 6 HOH 12 155 155 HOH HOH T . I 6 HOH 13 173 173 HOH HOH T . I 6 HOH 14 176 176 HOH HOH T . I 6 HOH 15 195 195 HOH HOH T . I 6 HOH 16 214 214 HOH HOH T . I 6 HOH 17 221 221 HOH HOH T . I 6 HOH 18 223 223 HOH HOH T . I 6 HOH 19 234 234 HOH HOH T . I 6 HOH 20 236 236 HOH HOH T . I 6 HOH 21 258 258 HOH HOH T . I 6 HOH 22 262 262 HOH HOH T . I 6 HOH 23 268 268 HOH HOH T . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 B DOC 7 P DOC 873 ? DC "2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE" 2 C BRU 2 T BRU 840 ? DU ? # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5050 ? 1 MORE -37 ? 1 'SSA (A^2)' 19850 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-07-21 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 AMoRE phasing . ? 2 CNS refinement 1.1 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "O4'" _pdbx_validate_rmsd_angle.auth_asym_id_1 T _pdbx_validate_rmsd_angle.auth_comp_id_1 DG _pdbx_validate_rmsd_angle.auth_seq_id_1 841 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 "C1'" _pdbx_validate_rmsd_angle.auth_asym_id_2 T _pdbx_validate_rmsd_angle.auth_comp_id_2 DG _pdbx_validate_rmsd_angle.auth_seq_id_2 841 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 N9 _pdbx_validate_rmsd_angle.auth_asym_id_3 T _pdbx_validate_rmsd_angle.auth_comp_id_3 DG _pdbx_validate_rmsd_angle.auth_seq_id_3 841 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 110.21 _pdbx_validate_rmsd_angle.angle_target_value 108.30 _pdbx_validate_rmsd_angle.angle_deviation 1.91 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.30 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 26 ? ? -173.68 -72.43 2 1 CYS A 37 ? ? 20.39 64.16 3 1 LYS A 51 ? ? -58.67 170.53 4 1 ASP A 52 ? ? 50.19 -14.61 5 1 LYS A 60 ? ? 58.58 -120.89 6 1 CYS A 88 ? ? -153.75 73.91 7 1 PRO A 89 ? ? -62.66 41.17 8 1 GLN A 90 ? ? -157.39 -8.72 9 1 SER A 117 ? ? -174.15 112.94 10 1 SER A 145 ? ? -64.51 58.53 11 1 ASP A 146 ? ? -169.19 -61.94 12 1 LYS A 245 ? ? -65.12 -70.25 13 1 ALA A 252 ? ? -53.41 -9.14 14 1 SER A 276 ? ? -76.33 -75.42 15 1 ASP A 289 ? ? -165.33 110.85 16 1 ASP A 306 ? ? -172.55 97.92 17 1 LYS A 309 ? ? -44.09 78.55 18 1 LYS A 310 ? ? 25.84 48.99 19 1 CYS A 311 ? ? -108.83 74.13 20 1 GLU A 314 ? ? 76.14 -9.30 21 1 GLU A 316 ? ? 65.39 -26.01 22 1 CYS A 333 ? ? -65.80 -81.97 23 1 GLN A 334 ? ? -22.91 -52.75 24 1 SER A 350 ? ? -177.78 -117.06 25 1 SER A 351 ? ? -78.55 -144.58 26 1 GLU A 352 ? ? -101.74 64.37 27 1 LYS A 353 ? ? -64.99 91.08 28 1 TYR A 355 ? ? -169.30 103.20 29 1 THR A 381 ? ? -22.31 -60.77 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DC P 871 ? ? 0.064 'SIDE CHAIN' 2 1 DC P 872 ? ? 0.066 'SIDE CHAIN' 3 1 DG T 842 ? ? 0.070 'SIDE CHAIN' 4 1 DG T 843 ? ? 0.070 'SIDE CHAIN' 5 1 DT T 844 ? ? 0.063 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 49 ? CG ? A GLU 25 CG 2 1 Y 1 A GLU 49 ? CD ? A GLU 25 CD 3 1 Y 1 A GLU 49 ? OE1 ? A GLU 25 OE1 4 1 Y 1 A GLU 49 ? OE2 ? A GLU 25 OE2 5 1 Y 1 A LYS 76 ? CG ? A LYS 52 CG 6 1 Y 1 A LYS 76 ? CD ? A LYS 52 CD 7 1 Y 1 A LYS 76 ? CE ? A LYS 52 CE 8 1 Y 1 A LYS 76 ? NZ ? A LYS 52 NZ 9 1 Y 1 A ARG 82 ? CG ? A ARG 58 CG 10 1 Y 1 A ARG 82 ? CD ? A ARG 58 CD 11 1 Y 1 A ARG 82 ? NE ? A ARG 58 NE 12 1 Y 1 A ARG 82 ? CZ ? A ARG 58 CZ 13 1 Y 1 A ARG 82 ? NH1 ? A ARG 58 NH1 14 1 Y 1 A ARG 82 ? NH2 ? A ARG 58 NH2 15 1 Y 1 A ASP 146 ? CG ? A ASP 122 CG 16 1 Y 1 A ASP 146 ? OD1 ? A ASP 122 OD1 17 1 Y 1 A ASP 146 ? OD2 ? A ASP 122 OD2 18 1 Y 1 A LYS 245 ? CG ? A LYS 221 CG 19 1 Y 1 A LYS 245 ? CD ? A LYS 221 CD 20 1 Y 1 A LYS 245 ? CE ? A LYS 221 CE 21 1 Y 1 A LYS 245 ? NZ ? A LYS 221 NZ 22 1 Y 1 A LYS 248 ? CD ? A LYS 224 CD 23 1 Y 1 A LYS 248 ? CE ? A LYS 224 CE 24 1 Y 1 A LYS 248 ? NZ ? A LYS 224 NZ 25 1 Y 1 A LYS 267 ? CE ? A LYS 243 CE 26 1 Y 1 A LYS 267 ? NZ ? A LYS 243 NZ 27 1 Y 1 A LYS 271 ? CG ? A LYS 247 CG 28 1 Y 1 A LYS 271 ? CD ? A LYS 247 CD 29 1 Y 1 A LYS 271 ? CE ? A LYS 247 CE 30 1 Y 1 A LYS 271 ? NZ ? A LYS 247 NZ 31 1 Y 1 A GLN 279 ? CD ? A GLN 255 CD 32 1 Y 1 A GLN 279 ? OE1 ? A GLN 255 OE1 33 1 Y 1 A GLN 279 ? NE2 ? A GLN 255 NE2 34 1 Y 1 A LYS 309 ? CG ? A LYS 285 CG 35 1 Y 1 A LYS 309 ? CD ? A LYS 285 CD 36 1 Y 1 A LYS 309 ? CE ? A LYS 285 CE 37 1 Y 1 A LYS 309 ? NZ ? A LYS 285 NZ 38 1 Y 1 A LYS 310 ? CD ? A LYS 286 CD 39 1 Y 1 A LYS 310 ? CE ? A LYS 286 CE 40 1 Y 1 A LYS 310 ? NZ ? A LYS 286 NZ 41 1 Y 1 A VAL 315 ? CG1 ? A VAL 291 CG1 42 1 Y 1 A VAL 315 ? CG2 ? A VAL 291 CG2 43 1 Y 1 A GLU 316 ? CG ? A GLU 292 CG 44 1 Y 1 A GLU 316 ? CD ? A GLU 292 CD 45 1 Y 1 A GLU 316 ? OE1 ? A GLU 292 OE1 46 1 Y 1 A GLU 316 ? OE2 ? A GLU 292 OE2 47 1 Y 1 A LYS 318 ? CG ? A LYS 294 CG 48 1 Y 1 A LYS 318 ? CD ? A LYS 294 CD 49 1 Y 1 A LYS 318 ? CE ? A LYS 294 CE 50 1 Y 1 A LYS 318 ? NZ ? A LYS 294 NZ 51 1 Y 1 A LYS 338 ? CG ? A LYS 314 CG 52 1 Y 1 A LYS 338 ? CD ? A LYS 314 CD 53 1 Y 1 A LYS 338 ? CE ? A LYS 314 CE 54 1 Y 1 A LYS 338 ? NZ ? A LYS 314 NZ 55 1 Y 1 A TYR 349 ? CG ? A TYR 325 CG 56 1 Y 1 A TYR 349 ? CD1 ? A TYR 325 CD1 57 1 Y 1 A TYR 349 ? CD2 ? A TYR 325 CD2 58 1 Y 1 A TYR 349 ? CE1 ? A TYR 325 CE1 59 1 Y 1 A TYR 349 ? CE2 ? A TYR 325 CE2 60 1 Y 1 A TYR 349 ? CZ ? A TYR 325 CZ 61 1 Y 1 A TYR 349 ? OH ? A TYR 325 OH 62 1 Y 1 A SER 350 ? OG ? A SER 326 OG 63 1 Y 1 A SER 351 ? OG ? A SER 327 OG 64 1 Y 1 A GLU 352 ? CG ? A GLU 328 CG 65 1 Y 1 A GLU 352 ? CD ? A GLU 328 CD 66 1 Y 1 A GLU 352 ? OE1 ? A GLU 328 OE1 67 1 Y 1 A GLU 352 ? OE2 ? A GLU 328 OE2 68 1 Y 1 A LYS 353 ? CG ? A LYS 329 CG 69 1 Y 1 A LYS 353 ? CD ? A LYS 329 CD 70 1 Y 1 A LYS 353 ? CE ? A LYS 329 CE 71 1 Y 1 A LYS 353 ? NZ ? A LYS 329 NZ 72 1 Y 1 A HIS 354 ? CG ? A HIS 330 CG 73 1 Y 1 A HIS 354 ? ND1 ? A HIS 330 ND1 74 1 Y 1 A HIS 354 ? CD2 ? A HIS 330 CD2 75 1 Y 1 A HIS 354 ? CE1 ? A HIS 330 CE1 76 1 Y 1 A HIS 354 ? NE2 ? A HIS 330 NE2 77 1 Y 1 A TYR 355 ? CG ? A TYR 331 CG 78 1 Y 1 A TYR 355 ? CD1 ? A TYR 331 CD1 79 1 Y 1 A TYR 355 ? CD2 ? A TYR 331 CD2 80 1 Y 1 A TYR 355 ? CE1 ? A TYR 331 CE1 81 1 Y 1 A TYR 355 ? CE2 ? A TYR 331 CE2 82 1 Y 1 A TYR 355 ? CZ ? A TYR 331 CZ 83 1 Y 1 A TYR 355 ? OH ? A TYR 331 OH 84 1 Y 1 A ARG 357 ? CG ? A ARG 333 CG 85 1 Y 1 A ARG 357 ? CD ? A ARG 333 CD 86 1 Y 1 A ARG 357 ? NE ? A ARG 333 NE 87 1 Y 1 A ARG 357 ? CZ ? A ARG 333 CZ 88 1 Y 1 A ARG 357 ? NH1 ? A ARG 333 NH1 89 1 Y 1 A ARG 357 ? NH2 ? A ARG 333 NH2 90 1 Y 1 A HIS 367 ? CG ? A HIS 343 CG 91 1 Y 1 A HIS 367 ? ND1 ? A HIS 343 ND1 92 1 Y 1 A HIS 367 ? CD2 ? A HIS 343 CD2 93 1 Y 1 A HIS 367 ? CE1 ? A HIS 343 CE1 94 1 Y 1 A HIS 367 ? NE2 ? A HIS 343 NE2 95 1 Y 1 A VAL 379 ? CG1 ? A VAL 355 CG1 96 1 Y 1 A VAL 379 ? CG2 ? A VAL 355 CG2 97 1 Y 1 A ILE 386 ? CG1 ? A ILE 362 CG1 98 1 Y 1 A ILE 386 ? CG2 ? A ILE 362 CG2 99 1 Y 1 A ILE 386 ? CD1 ? A ILE 362 CD1 100 1 Y 1 A LYS 389 ? CG ? A LYS 365 CG 101 1 Y 1 A LYS 389 ? CD ? A LYS 365 CD 102 1 Y 1 A LYS 389 ? CE ? A LYS 365 CE 103 1 Y 1 A LYS 389 ? NZ ? A LYS 365 NZ 104 1 Y 1 A LEU 405 ? CG ? A LEU 381 CG 105 1 Y 1 A LEU 405 ? CD1 ? A LEU 381 CD1 106 1 Y 1 A LEU 405 ? CD2 ? A LEU 381 CD2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LYS 371 ? A LYS 347 2 1 Y 1 A LEU 372 ? A LEU 348 3 1 Y 1 A GLY 373 ? A GLY 349 4 1 Y 1 A THR 374 ? A THR 350 5 1 Y 1 A GLY 375 ? A GLY 351 6 1 Y 1 A ASN 376 ? A ASN 352 7 1 Y 1 A TYR 377 ? A TYR 353 8 1 Y 1 A ASP 378 ? A ASP 354 9 1 Y 1 A VAL 395 ? A VAL 371 10 1 Y 1 A ASN 396 ? A ASN 372 11 1 Y 1 A VAL 397 ? A VAL 373 12 1 Y 1 A LYS 398 ? A LYS 374 13 1 Y 1 A MET 399 ? A MET 375 14 1 Y 1 A PRO 400 ? A PRO 376 15 1 Y 1 A PHE 401 ? A PHE 377 16 1 Y 1 A HIS 402 ? A HIS 378 17 1 Y 1 A LEU 403 ? A LEU 379 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BRU N1 N N N 74 BRU C2 C N N 75 BRU N3 N N N 76 BRU C4 C N N 77 BRU C5 C N N 78 BRU C6 C N N 79 BRU O2 O N N 80 BRU O4 O N N 81 BRU BR BR N N 82 BRU "C1'" C N R 83 BRU "C2'" C N N 84 BRU "C3'" C N S 85 BRU "C4'" C N R 86 BRU "O3'" O N N 87 BRU "O4'" O N N 88 BRU "C5'" C N N 89 BRU "O5'" O N N 90 BRU P P N N 91 BRU OP1 O N N 92 BRU OP2 O N N 93 BRU OP3 O N N 94 BRU HN3 H N N 95 BRU H6 H N N 96 BRU "H1'" H N N 97 BRU "H2'" H N N 98 BRU "H2''" H N N 99 BRU "H3'" H N N 100 BRU "H4'" H N N 101 BRU "HO3'" H N N 102 BRU "H5'" H N N 103 BRU "H5''" H N N 104 BRU HOP2 H N N 105 BRU HOP3 H N N 106 CYS N N N N 107 CYS CA C N R 108 CYS C C N N 109 CYS O O N N 110 CYS CB C N N 111 CYS SG S N N 112 CYS OXT O N N 113 CYS H H N N 114 CYS H2 H N N 115 CYS HA H N N 116 CYS HB2 H N N 117 CYS HB3 H N N 118 CYS HG H N N 119 CYS HXT H N N 120 DA OP3 O N N 121 DA P P N N 122 DA OP1 O N N 123 DA OP2 O N N 124 DA "O5'" O N N 125 DA "C5'" C N N 126 DA "C4'" C N R 127 DA "O4'" O N N 128 DA "C3'" C N S 129 DA "O3'" O N N 130 DA "C2'" C N N 131 DA "C1'" C N R 132 DA N9 N Y N 133 DA C8 C Y N 134 DA N7 N Y N 135 DA C5 C Y N 136 DA C6 C Y N 137 DA N6 N N N 138 DA N1 N Y N 139 DA C2 C Y N 140 DA N3 N Y N 141 DA C4 C Y N 142 DA HOP3 H N N 143 DA HOP2 H N N 144 DA "H5'" H N N 145 DA "H5''" H N N 146 DA "H4'" H N N 147 DA "H3'" H N N 148 DA "HO3'" H N N 149 DA "H2'" H N N 150 DA "H2''" H N N 151 DA "H1'" H N N 152 DA H8 H N N 153 DA H61 H N N 154 DA H62 H N N 155 DA H2 H N N 156 DC OP3 O N N 157 DC P P N N 158 DC OP1 O N N 159 DC OP2 O N N 160 DC "O5'" O N N 161 DC "C5'" C N N 162 DC "C4'" C N R 163 DC "O4'" O N N 164 DC "C3'" C N S 165 DC "O3'" O N N 166 DC "C2'" C N N 167 DC "C1'" C N R 168 DC N1 N N N 169 DC C2 C N N 170 DC O2 O N N 171 DC N3 N N N 172 DC C4 C N N 173 DC N4 N N N 174 DC C5 C N N 175 DC C6 C N N 176 DC HOP3 H N N 177 DC HOP2 H N N 178 DC "H5'" H N N 179 DC "H5''" H N N 180 DC "H4'" H N N 181 DC "H3'" H N N 182 DC "HO3'" H N N 183 DC "H2'" H N N 184 DC "H2''" H N N 185 DC "H1'" H N N 186 DC H41 H N N 187 DC H42 H N N 188 DC H5 H N N 189 DC H6 H N N 190 DG OP3 O N N 191 DG P P N N 192 DG OP1 O N N 193 DG OP2 O N N 194 DG "O5'" O N N 195 DG "C5'" C N N 196 DG "C4'" C N R 197 DG "O4'" O N N 198 DG "C3'" C N S 199 DG "O3'" O N N 200 DG "C2'" C N N 201 DG "C1'" C N R 202 DG N9 N Y N 203 DG C8 C Y N 204 DG N7 N Y N 205 DG C5 C Y N 206 DG C6 C N N 207 DG O6 O N N 208 DG N1 N N N 209 DG C2 C N N 210 DG N2 N N N 211 DG N3 N N N 212 DG C4 C Y N 213 DG HOP3 H N N 214 DG HOP2 H N N 215 DG "H5'" H N N 216 DG "H5''" H N N 217 DG "H4'" H N N 218 DG "H3'" H N N 219 DG "HO3'" H N N 220 DG "H2'" H N N 221 DG "H2''" H N N 222 DG "H1'" H N N 223 DG H8 H N N 224 DG H1 H N N 225 DG H21 H N N 226 DG H22 H N N 227 DGT PG P N N 228 DGT O1G O N N 229 DGT O2G O N N 230 DGT O3G O N N 231 DGT O3B O N N 232 DGT PB P N S 233 DGT O1B O N N 234 DGT O2B O N N 235 DGT O3A O N N 236 DGT PA P N R 237 DGT O1A O N N 238 DGT O2A O N N 239 DGT "O5'" O N N 240 DGT "C5'" C N N 241 DGT "C4'" C N R 242 DGT "O4'" O N N 243 DGT "C3'" C N S 244 DGT "O3'" O N N 245 DGT "C2'" C N N 246 DGT "C1'" C N R 247 DGT N9 N Y N 248 DGT C8 C Y N 249 DGT N7 N Y N 250 DGT C5 C Y N 251 DGT C6 C N N 252 DGT O6 O N N 253 DGT N1 N N N 254 DGT C2 C N N 255 DGT N2 N N N 256 DGT N3 N N N 257 DGT C4 C Y N 258 DGT HO1G H N N 259 DGT HO2G H N N 260 DGT HO1B H N N 261 DGT HO1A H N N 262 DGT "H5'" H N N 263 DGT "H5'A" H N N 264 DGT "H4'" H N N 265 DGT "H3'" H N N 266 DGT "HO3'" H N N 267 DGT "H2'" H N N 268 DGT "H2'A" H N N 269 DGT "H1'" H N N 270 DGT H8 H N N 271 DGT HN2 H N N 272 DGT HN2A H N N 273 DGT H16 H N N 274 DOC N1 N N N 275 DOC C2 C N N 276 DOC N3 N N N 277 DOC C4 C N N 278 DOC C5 C N N 279 DOC C6 C N N 280 DOC O2 O N N 281 DOC N4 N N N 282 DOC "C1'" C N R 283 DOC "C2'" C N N 284 DOC "C3'" C N N 285 DOC "C4'" C N S 286 DOC "O4'" O N N 287 DOC "C5'" C N N 288 DOC "O5'" O N N 289 DOC P P N N 290 DOC OP1 O N N 291 DOC OP2 O N N 292 DOC OP3 O N N 293 DOC H5 H N N 294 DOC H6 H N N 295 DOC HN41 H N N 296 DOC HN42 H N N 297 DOC "H1'" H N N 298 DOC "H2'" H N N 299 DOC "H2''" H N N 300 DOC "H3'1" H N N 301 DOC "H3'2" H N N 302 DOC "H4'" H N N 303 DOC "H5'" H N N 304 DOC "H5''" H N N 305 DOC HOP2 H N N 306 DOC HOP3 H N N 307 DT OP3 O N N 308 DT P P N N 309 DT OP1 O N N 310 DT OP2 O N N 311 DT "O5'" O N N 312 DT "C5'" C N N 313 DT "C4'" C N R 314 DT "O4'" O N N 315 DT "C3'" C N S 316 DT "O3'" O N N 317 DT "C2'" C N N 318 DT "C1'" C N R 319 DT N1 N N N 320 DT C2 C N N 321 DT O2 O N N 322 DT N3 N N N 323 DT C4 C N N 324 DT O4 O N N 325 DT C5 C N N 326 DT C7 C N N 327 DT C6 C N N 328 DT HOP3 H N N 329 DT HOP2 H N N 330 DT "H5'" H N N 331 DT "H5''" H N N 332 DT "H4'" H N N 333 DT "H3'" H N N 334 DT "HO3'" H N N 335 DT "H2'" H N N 336 DT "H2''" H N N 337 DT "H1'" H N N 338 DT H3 H N N 339 DT H71 H N N 340 DT H72 H N N 341 DT H73 H N N 342 DT H6 H N N 343 GLN N N N N 344 GLN CA C N S 345 GLN C C N N 346 GLN O O N N 347 GLN CB C N N 348 GLN CG C N N 349 GLN CD C N N 350 GLN OE1 O N N 351 GLN NE2 N N N 352 GLN OXT O N N 353 GLN H H N N 354 GLN H2 H N N 355 GLN HA H N N 356 GLN HB2 H N N 357 GLN HB3 H N N 358 GLN HG2 H N N 359 GLN HG3 H N N 360 GLN HE21 H N N 361 GLN HE22 H N N 362 GLN HXT H N N 363 GLU N N N N 364 GLU CA C N S 365 GLU C C N N 366 GLU O O N N 367 GLU CB C N N 368 GLU CG C N N 369 GLU CD C N N 370 GLU OE1 O N N 371 GLU OE2 O N N 372 GLU OXT O N N 373 GLU H H N N 374 GLU H2 H N N 375 GLU HA H N N 376 GLU HB2 H N N 377 GLU HB3 H N N 378 GLU HG2 H N N 379 GLU HG3 H N N 380 GLU HE2 H N N 381 GLU HXT H N N 382 GLY N N N N 383 GLY CA C N N 384 GLY C C N N 385 GLY O O N N 386 GLY OXT O N N 387 GLY H H N N 388 GLY H2 H N N 389 GLY HA2 H N N 390 GLY HA3 H N N 391 GLY HXT H N N 392 HIS N N N N 393 HIS CA C N S 394 HIS C C N N 395 HIS O O N N 396 HIS CB C N N 397 HIS CG C Y N 398 HIS ND1 N Y N 399 HIS CD2 C Y N 400 HIS CE1 C Y N 401 HIS NE2 N Y N 402 HIS OXT O N N 403 HIS H H N N 404 HIS H2 H N N 405 HIS HA H N N 406 HIS HB2 H N N 407 HIS HB3 H N N 408 HIS HD1 H N N 409 HIS HD2 H N N 410 HIS HE1 H N N 411 HIS HE2 H N N 412 HIS HXT H N N 413 HOH O O N N 414 HOH H1 H N N 415 HOH H2 H N N 416 ILE N N N N 417 ILE CA C N S 418 ILE C C N N 419 ILE O O N N 420 ILE CB C N S 421 ILE CG1 C N N 422 ILE CG2 C N N 423 ILE CD1 C N N 424 ILE OXT O N N 425 ILE H H N N 426 ILE H2 H N N 427 ILE HA H N N 428 ILE HB H N N 429 ILE HG12 H N N 430 ILE HG13 H N N 431 ILE HG21 H N N 432 ILE HG22 H N N 433 ILE HG23 H N N 434 ILE HD11 H N N 435 ILE HD12 H N N 436 ILE HD13 H N N 437 ILE HXT H N N 438 LEU N N N N 439 LEU CA C N S 440 LEU C C N N 441 LEU O O N N 442 LEU CB C N N 443 LEU CG C N N 444 LEU CD1 C N N 445 LEU CD2 C N N 446 LEU OXT O N N 447 LEU H H N N 448 LEU H2 H N N 449 LEU HA H N N 450 LEU HB2 H N N 451 LEU HB3 H N N 452 LEU HG H N N 453 LEU HD11 H N N 454 LEU HD12 H N N 455 LEU HD13 H N N 456 LEU HD21 H N N 457 LEU HD22 H N N 458 LEU HD23 H N N 459 LEU HXT H N N 460 LYS N N N N 461 LYS CA C N S 462 LYS C C N N 463 LYS O O N N 464 LYS CB C N N 465 LYS CG C N N 466 LYS CD C N N 467 LYS CE C N N 468 LYS NZ N N N 469 LYS OXT O N N 470 LYS H H N N 471 LYS H2 H N N 472 LYS HA H N N 473 LYS HB2 H N N 474 LYS HB3 H N N 475 LYS HG2 H N N 476 LYS HG3 H N N 477 LYS HD2 H N N 478 LYS HD3 H N N 479 LYS HE2 H N N 480 LYS HE3 H N N 481 LYS HZ1 H N N 482 LYS HZ2 H N N 483 LYS HZ3 H N N 484 LYS HXT H N N 485 MET N N N N 486 MET CA C N S 487 MET C C N N 488 MET O O N N 489 MET CB C N N 490 MET CG C N N 491 MET SD S N N 492 MET CE C N N 493 MET OXT O N N 494 MET H H N N 495 MET H2 H N N 496 MET HA H N N 497 MET HB2 H N N 498 MET HB3 H N N 499 MET HG2 H N N 500 MET HG3 H N N 501 MET HE1 H N N 502 MET HE2 H N N 503 MET HE3 H N N 504 MET HXT H N N 505 MG MG MG N N 506 PHE N N N N 507 PHE CA C N S 508 PHE C C N N 509 PHE O O N N 510 PHE CB C N N 511 PHE CG C Y N 512 PHE CD1 C Y N 513 PHE CD2 C Y N 514 PHE CE1 C Y N 515 PHE CE2 C Y N 516 PHE CZ C Y N 517 PHE OXT O N N 518 PHE H H N N 519 PHE H2 H N N 520 PHE HA H N N 521 PHE HB2 H N N 522 PHE HB3 H N N 523 PHE HD1 H N N 524 PHE HD2 H N N 525 PHE HE1 H N N 526 PHE HE2 H N N 527 PHE HZ H N N 528 PHE HXT H N N 529 PRO N N N N 530 PRO CA C N S 531 PRO C C N N 532 PRO O O N N 533 PRO CB C N N 534 PRO CG C N N 535 PRO CD C N N 536 PRO OXT O N N 537 PRO H H N N 538 PRO HA H N N 539 PRO HB2 H N N 540 PRO HB3 H N N 541 PRO HG2 H N N 542 PRO HG3 H N N 543 PRO HD2 H N N 544 PRO HD3 H N N 545 PRO HXT H N N 546 SER N N N N 547 SER CA C N S 548 SER C C N N 549 SER O O N N 550 SER CB C N N 551 SER OG O N N 552 SER OXT O N N 553 SER H H N N 554 SER H2 H N N 555 SER HA H N N 556 SER HB2 H N N 557 SER HB3 H N N 558 SER HG H N N 559 SER HXT H N N 560 THR N N N N 561 THR CA C N S 562 THR C C N N 563 THR O O N N 564 THR CB C N R 565 THR OG1 O N N 566 THR CG2 C N N 567 THR OXT O N N 568 THR H H N N 569 THR H2 H N N 570 THR HA H N N 571 THR HB H N N 572 THR HG1 H N N 573 THR HG21 H N N 574 THR HG22 H N N 575 THR HG23 H N N 576 THR HXT H N N 577 TYR N N N N 578 TYR CA C N S 579 TYR C C N N 580 TYR O O N N 581 TYR CB C N N 582 TYR CG C Y N 583 TYR CD1 C Y N 584 TYR CD2 C Y N 585 TYR CE1 C Y N 586 TYR CE2 C Y N 587 TYR CZ C Y N 588 TYR OH O N N 589 TYR OXT O N N 590 TYR H H N N 591 TYR H2 H N N 592 TYR HA H N N 593 TYR HB2 H N N 594 TYR HB3 H N N 595 TYR HD1 H N N 596 TYR HD2 H N N 597 TYR HE1 H N N 598 TYR HE2 H N N 599 TYR HH H N N 600 TYR HXT H N N 601 VAL N N N N 602 VAL CA C N S 603 VAL C C N N 604 VAL O O N N 605 VAL CB C N N 606 VAL CG1 C N N 607 VAL CG2 C N N 608 VAL OXT O N N 609 VAL H H N N 610 VAL H2 H N N 611 VAL HA H N N 612 VAL HB H N N 613 VAL HG11 H N N 614 VAL HG12 H N N 615 VAL HG13 H N N 616 VAL HG21 H N N 617 VAL HG22 H N N 618 VAL HG23 H N N 619 VAL HXT H N N 620 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BRU N1 C2 sing N N 70 BRU N1 C6 sing N N 71 BRU N1 "C1'" sing N N 72 BRU C2 N3 sing N N 73 BRU C2 O2 doub N N 74 BRU N3 C4 sing N N 75 BRU N3 HN3 sing N N 76 BRU C4 C5 sing N N 77 BRU C4 O4 doub N N 78 BRU C5 C6 doub N N 79 BRU C5 BR sing N N 80 BRU C6 H6 sing N N 81 BRU "C1'" "C2'" sing N N 82 BRU "C1'" "O4'" sing N N 83 BRU "C1'" "H1'" sing N N 84 BRU "C2'" "C3'" sing N N 85 BRU "C2'" "H2'" sing N N 86 BRU "C2'" "H2''" sing N N 87 BRU "C3'" "C4'" sing N N 88 BRU "C3'" "O3'" sing N N 89 BRU "C3'" "H3'" sing N N 90 BRU "C4'" "O4'" sing N N 91 BRU "C4'" "C5'" sing N N 92 BRU "C4'" "H4'" sing N N 93 BRU "O3'" "HO3'" sing N N 94 BRU "C5'" "O5'" sing N N 95 BRU "C5'" "H5'" sing N N 96 BRU "C5'" "H5''" sing N N 97 BRU "O5'" P sing N N 98 BRU P OP1 doub N N 99 BRU P OP2 sing N N 100 BRU P OP3 sing N N 101 BRU OP2 HOP2 sing N N 102 BRU OP3 HOP3 sing N N 103 CYS N CA sing N N 104 CYS N H sing N N 105 CYS N H2 sing N N 106 CYS CA C sing N N 107 CYS CA CB sing N N 108 CYS CA HA sing N N 109 CYS C O doub N N 110 CYS C OXT sing N N 111 CYS CB SG sing N N 112 CYS CB HB2 sing N N 113 CYS CB HB3 sing N N 114 CYS SG HG sing N N 115 CYS OXT HXT sing N N 116 DA OP3 P sing N N 117 DA OP3 HOP3 sing N N 118 DA P OP1 doub N N 119 DA P OP2 sing N N 120 DA P "O5'" sing N N 121 DA OP2 HOP2 sing N N 122 DA "O5'" "C5'" sing N N 123 DA "C5'" "C4'" sing N N 124 DA "C5'" "H5'" sing N N 125 DA "C5'" "H5''" sing N N 126 DA "C4'" "O4'" sing N N 127 DA "C4'" "C3'" sing N N 128 DA "C4'" "H4'" sing N N 129 DA "O4'" "C1'" sing N N 130 DA "C3'" "O3'" sing N N 131 DA "C3'" "C2'" sing N N 132 DA "C3'" "H3'" sing N N 133 DA "O3'" "HO3'" sing N N 134 DA "C2'" "C1'" sing N N 135 DA "C2'" "H2'" sing N N 136 DA "C2'" "H2''" sing N N 137 DA "C1'" N9 sing N N 138 DA "C1'" "H1'" sing N N 139 DA N9 C8 sing Y N 140 DA N9 C4 sing Y N 141 DA C8 N7 doub Y N 142 DA C8 H8 sing N N 143 DA N7 C5 sing Y N 144 DA C5 C6 sing Y N 145 DA C5 C4 doub Y N 146 DA C6 N6 sing N N 147 DA C6 N1 doub Y N 148 DA N6 H61 sing N N 149 DA N6 H62 sing N N 150 DA N1 C2 sing Y N 151 DA C2 N3 doub Y N 152 DA C2 H2 sing N N 153 DA N3 C4 sing Y N 154 DC OP3 P sing N N 155 DC OP3 HOP3 sing N N 156 DC P OP1 doub N N 157 DC P OP2 sing N N 158 DC P "O5'" sing N N 159 DC OP2 HOP2 sing N N 160 DC "O5'" "C5'" sing N N 161 DC "C5'" "C4'" sing N N 162 DC "C5'" "H5'" sing N N 163 DC "C5'" "H5''" sing N N 164 DC "C4'" "O4'" sing N N 165 DC "C4'" "C3'" sing N N 166 DC "C4'" "H4'" sing N N 167 DC "O4'" "C1'" sing N N 168 DC "C3'" "O3'" sing N N 169 DC "C3'" "C2'" sing N N 170 DC "C3'" "H3'" sing N N 171 DC "O3'" "HO3'" sing N N 172 DC "C2'" "C1'" sing N N 173 DC "C2'" "H2'" sing N N 174 DC "C2'" "H2''" sing N N 175 DC "C1'" N1 sing N N 176 DC "C1'" "H1'" sing N N 177 DC N1 C2 sing N N 178 DC N1 C6 sing N N 179 DC C2 O2 doub N N 180 DC C2 N3 sing N N 181 DC N3 C4 doub N N 182 DC C4 N4 sing N N 183 DC C4 C5 sing N N 184 DC N4 H41 sing N N 185 DC N4 H42 sing N N 186 DC C5 C6 doub N N 187 DC C5 H5 sing N N 188 DC C6 H6 sing N N 189 DG OP3 P sing N N 190 DG OP3 HOP3 sing N N 191 DG P OP1 doub N N 192 DG P OP2 sing N N 193 DG P "O5'" sing N N 194 DG OP2 HOP2 sing N N 195 DG "O5'" "C5'" sing N N 196 DG "C5'" "C4'" sing N N 197 DG "C5'" "H5'" sing N N 198 DG "C5'" "H5''" sing N N 199 DG "C4'" "O4'" sing N N 200 DG "C4'" "C3'" sing N N 201 DG "C4'" "H4'" sing N N 202 DG "O4'" "C1'" sing N N 203 DG "C3'" "O3'" sing N N 204 DG "C3'" "C2'" sing N N 205 DG "C3'" "H3'" sing N N 206 DG "O3'" "HO3'" sing N N 207 DG "C2'" "C1'" sing N N 208 DG "C2'" "H2'" sing N N 209 DG "C2'" "H2''" sing N N 210 DG "C1'" N9 sing N N 211 DG "C1'" "H1'" sing N N 212 DG N9 C8 sing Y N 213 DG N9 C4 sing Y N 214 DG C8 N7 doub Y N 215 DG C8 H8 sing N N 216 DG N7 C5 sing Y N 217 DG C5 C6 sing N N 218 DG C5 C4 doub Y N 219 DG C6 O6 doub N N 220 DG C6 N1 sing N N 221 DG N1 C2 sing N N 222 DG N1 H1 sing N N 223 DG C2 N2 sing N N 224 DG C2 N3 doub N N 225 DG N2 H21 sing N N 226 DG N2 H22 sing N N 227 DG N3 C4 sing N N 228 DGT PG O1G sing N N 229 DGT PG O2G sing N N 230 DGT O1G HO1G sing N N 231 DGT O2G HO2G sing N N 232 DGT O3G PG doub N N 233 DGT O3B PG sing N N 234 DGT PB O3B sing N N 235 DGT PB O1B sing N N 236 DGT PB O3A sing N N 237 DGT O1B HO1B sing N N 238 DGT O2B PB doub N N 239 DGT PA O3A sing N N 240 DGT PA O1A sing N N 241 DGT O1A HO1A sing N N 242 DGT O2A PA doub N N 243 DGT "O5'" PA sing N N 244 DGT "O5'" "C5'" sing N N 245 DGT "C5'" "H5'" sing N N 246 DGT "C5'" "H5'A" sing N N 247 DGT "C4'" "C5'" sing N N 248 DGT "C4'" "H4'" sing N N 249 DGT "O4'" "C4'" sing N N 250 DGT "C3'" "C4'" sing N N 251 DGT "C3'" "O3'" sing N N 252 DGT "C3'" "H3'" sing N N 253 DGT "O3'" "HO3'" sing N N 254 DGT "C2'" "C3'" sing N N 255 DGT "C2'" "C1'" sing N N 256 DGT "C2'" "H2'" sing N N 257 DGT "C2'" "H2'A" sing N N 258 DGT "C1'" "O4'" sing N N 259 DGT "C1'" "H1'" sing N N 260 DGT N9 "C1'" sing N N 261 DGT N9 C4 sing Y N 262 DGT C8 N9 sing Y N 263 DGT C8 H8 sing N N 264 DGT N7 C8 doub Y N 265 DGT N7 C5 sing Y N 266 DGT C5 C6 sing N N 267 DGT C5 C4 doub Y N 268 DGT C6 N1 sing N N 269 DGT O6 C6 doub N N 270 DGT N1 C2 sing N N 271 DGT C2 N3 doub N N 272 DGT C2 N2 sing N N 273 DGT N2 HN2 sing N N 274 DGT N2 HN2A sing N N 275 DGT C4 N3 sing N N 276 DGT N1 H16 sing N N 277 DOC N1 C2 sing N N 278 DOC N1 C6 sing N N 279 DOC N1 "C1'" sing N N 280 DOC C2 N3 sing N N 281 DOC C2 O2 doub N N 282 DOC N3 C4 doub N N 283 DOC C4 C5 sing N N 284 DOC C4 N4 sing N N 285 DOC C5 C6 doub N N 286 DOC C5 H5 sing N N 287 DOC C6 H6 sing N N 288 DOC N4 HN41 sing N N 289 DOC N4 HN42 sing N N 290 DOC "C1'" "C2'" sing N N 291 DOC "C1'" "O4'" sing N N 292 DOC "C1'" "H1'" sing N N 293 DOC "C2'" "C3'" sing N N 294 DOC "C2'" "H2'" sing N N 295 DOC "C2'" "H2''" sing N N 296 DOC "C3'" "C4'" sing N N 297 DOC "C3'" "H3'1" sing N N 298 DOC "C3'" "H3'2" sing N N 299 DOC "C4'" "O4'" sing N N 300 DOC "C4'" "C5'" sing N N 301 DOC "C4'" "H4'" sing N N 302 DOC "C5'" "O5'" sing N N 303 DOC "C5'" "H5'" sing N N 304 DOC "C5'" "H5''" sing N N 305 DOC "O5'" P sing N N 306 DOC P OP1 doub N N 307 DOC P OP2 sing N N 308 DOC P OP3 sing N N 309 DOC OP2 HOP2 sing N N 310 DOC OP3 HOP3 sing N N 311 DT OP3 P sing N N 312 DT OP3 HOP3 sing N N 313 DT P OP1 doub N N 314 DT P OP2 sing N N 315 DT P "O5'" sing N N 316 DT OP2 HOP2 sing N N 317 DT "O5'" "C5'" sing N N 318 DT "C5'" "C4'" sing N N 319 DT "C5'" "H5'" sing N N 320 DT "C5'" "H5''" sing N N 321 DT "C4'" "O4'" sing N N 322 DT "C4'" "C3'" sing N N 323 DT "C4'" "H4'" sing N N 324 DT "O4'" "C1'" sing N N 325 DT "C3'" "O3'" sing N N 326 DT "C3'" "C2'" sing N N 327 DT "C3'" "H3'" sing N N 328 DT "O3'" "HO3'" sing N N 329 DT "C2'" "C1'" sing N N 330 DT "C2'" "H2'" sing N N 331 DT "C2'" "H2''" sing N N 332 DT "C1'" N1 sing N N 333 DT "C1'" "H1'" sing N N 334 DT N1 C2 sing N N 335 DT N1 C6 sing N N 336 DT C2 O2 doub N N 337 DT C2 N3 sing N N 338 DT N3 C4 sing N N 339 DT N3 H3 sing N N 340 DT C4 O4 doub N N 341 DT C4 C5 sing N N 342 DT C5 C7 sing N N 343 DT C5 C6 doub N N 344 DT C7 H71 sing N N 345 DT C7 H72 sing N N 346 DT C7 H73 sing N N 347 DT C6 H6 sing N N 348 GLN N CA sing N N 349 GLN N H sing N N 350 GLN N H2 sing N N 351 GLN CA C sing N N 352 GLN CA CB sing N N 353 GLN CA HA sing N N 354 GLN C O doub N N 355 GLN C OXT sing N N 356 GLN CB CG sing N N 357 GLN CB HB2 sing N N 358 GLN CB HB3 sing N N 359 GLN CG CD sing N N 360 GLN CG HG2 sing N N 361 GLN CG HG3 sing N N 362 GLN CD OE1 doub N N 363 GLN CD NE2 sing N N 364 GLN NE2 HE21 sing N N 365 GLN NE2 HE22 sing N N 366 GLN OXT HXT sing N N 367 GLU N CA sing N N 368 GLU N H sing N N 369 GLU N H2 sing N N 370 GLU CA C sing N N 371 GLU CA CB sing N N 372 GLU CA HA sing N N 373 GLU C O doub N N 374 GLU C OXT sing N N 375 GLU CB CG sing N N 376 GLU CB HB2 sing N N 377 GLU CB HB3 sing N N 378 GLU CG CD sing N N 379 GLU CG HG2 sing N N 380 GLU CG HG3 sing N N 381 GLU CD OE1 doub N N 382 GLU CD OE2 sing N N 383 GLU OE2 HE2 sing N N 384 GLU OXT HXT sing N N 385 GLY N CA sing N N 386 GLY N H sing N N 387 GLY N H2 sing N N 388 GLY CA C sing N N 389 GLY CA HA2 sing N N 390 GLY CA HA3 sing N N 391 GLY C O doub N N 392 GLY C OXT sing N N 393 GLY OXT HXT sing N N 394 HIS N CA sing N N 395 HIS N H sing N N 396 HIS N H2 sing N N 397 HIS CA C sing N N 398 HIS CA CB sing N N 399 HIS CA HA sing N N 400 HIS C O doub N N 401 HIS C OXT sing N N 402 HIS CB CG sing N N 403 HIS CB HB2 sing N N 404 HIS CB HB3 sing N N 405 HIS CG ND1 sing Y N 406 HIS CG CD2 doub Y N 407 HIS ND1 CE1 doub Y N 408 HIS ND1 HD1 sing N N 409 HIS CD2 NE2 sing Y N 410 HIS CD2 HD2 sing N N 411 HIS CE1 NE2 sing Y N 412 HIS CE1 HE1 sing N N 413 HIS NE2 HE2 sing N N 414 HIS OXT HXT sing N N 415 HOH O H1 sing N N 416 HOH O H2 sing N N 417 ILE N CA sing N N 418 ILE N H sing N N 419 ILE N H2 sing N N 420 ILE CA C sing N N 421 ILE CA CB sing N N 422 ILE CA HA sing N N 423 ILE C O doub N N 424 ILE C OXT sing N N 425 ILE CB CG1 sing N N 426 ILE CB CG2 sing N N 427 ILE CB HB sing N N 428 ILE CG1 CD1 sing N N 429 ILE CG1 HG12 sing N N 430 ILE CG1 HG13 sing N N 431 ILE CG2 HG21 sing N N 432 ILE CG2 HG22 sing N N 433 ILE CG2 HG23 sing N N 434 ILE CD1 HD11 sing N N 435 ILE CD1 HD12 sing N N 436 ILE CD1 HD13 sing N N 437 ILE OXT HXT sing N N 438 LEU N CA sing N N 439 LEU N H sing N N 440 LEU N H2 sing N N 441 LEU CA C sing N N 442 LEU CA CB sing N N 443 LEU CA HA sing N N 444 LEU C O doub N N 445 LEU C OXT sing N N 446 LEU CB CG sing N N 447 LEU CB HB2 sing N N 448 LEU CB HB3 sing N N 449 LEU CG CD1 sing N N 450 LEU CG CD2 sing N N 451 LEU CG HG sing N N 452 LEU CD1 HD11 sing N N 453 LEU CD1 HD12 sing N N 454 LEU CD1 HD13 sing N N 455 LEU CD2 HD21 sing N N 456 LEU CD2 HD22 sing N N 457 LEU CD2 HD23 sing N N 458 LEU OXT HXT sing N N 459 LYS N CA sing N N 460 LYS N H sing N N 461 LYS N H2 sing N N 462 LYS CA C sing N N 463 LYS CA CB sing N N 464 LYS CA HA sing N N 465 LYS C O doub N N 466 LYS C OXT sing N N 467 LYS CB CG sing N N 468 LYS CB HB2 sing N N 469 LYS CB HB3 sing N N 470 LYS CG CD sing N N 471 LYS CG HG2 sing N N 472 LYS CG HG3 sing N N 473 LYS CD CE sing N N 474 LYS CD HD2 sing N N 475 LYS CD HD3 sing N N 476 LYS CE NZ sing N N 477 LYS CE HE2 sing N N 478 LYS CE HE3 sing N N 479 LYS NZ HZ1 sing N N 480 LYS NZ HZ2 sing N N 481 LYS NZ HZ3 sing N N 482 LYS OXT HXT sing N N 483 MET N CA sing N N 484 MET N H sing N N 485 MET N H2 sing N N 486 MET CA C sing N N 487 MET CA CB sing N N 488 MET CA HA sing N N 489 MET C O doub N N 490 MET C OXT sing N N 491 MET CB CG sing N N 492 MET CB HB2 sing N N 493 MET CB HB3 sing N N 494 MET CG SD sing N N 495 MET CG HG2 sing N N 496 MET CG HG3 sing N N 497 MET SD CE sing N N 498 MET CE HE1 sing N N 499 MET CE HE2 sing N N 500 MET CE HE3 sing N N 501 MET OXT HXT sing N N 502 PHE N CA sing N N 503 PHE N H sing N N 504 PHE N H2 sing N N 505 PHE CA C sing N N 506 PHE CA CB sing N N 507 PHE CA HA sing N N 508 PHE C O doub N N 509 PHE C OXT sing N N 510 PHE CB CG sing N N 511 PHE CB HB2 sing N N 512 PHE CB HB3 sing N N 513 PHE CG CD1 doub Y N 514 PHE CG CD2 sing Y N 515 PHE CD1 CE1 sing Y N 516 PHE CD1 HD1 sing N N 517 PHE CD2 CE2 doub Y N 518 PHE CD2 HD2 sing N N 519 PHE CE1 CZ doub Y N 520 PHE CE1 HE1 sing N N 521 PHE CE2 CZ sing Y N 522 PHE CE2 HE2 sing N N 523 PHE CZ HZ sing N N 524 PHE OXT HXT sing N N 525 PRO N CA sing N N 526 PRO N CD sing N N 527 PRO N H sing N N 528 PRO CA C sing N N 529 PRO CA CB sing N N 530 PRO CA HA sing N N 531 PRO C O doub N N 532 PRO C OXT sing N N 533 PRO CB CG sing N N 534 PRO CB HB2 sing N N 535 PRO CB HB3 sing N N 536 PRO CG CD sing N N 537 PRO CG HG2 sing N N 538 PRO CG HG3 sing N N 539 PRO CD HD2 sing N N 540 PRO CD HD3 sing N N 541 PRO OXT HXT sing N N 542 SER N CA sing N N 543 SER N H sing N N 544 SER N H2 sing N N 545 SER CA C sing N N 546 SER CA CB sing N N 547 SER CA HA sing N N 548 SER C O doub N N 549 SER C OXT sing N N 550 SER CB OG sing N N 551 SER CB HB2 sing N N 552 SER CB HB3 sing N N 553 SER OG HG sing N N 554 SER OXT HXT sing N N 555 THR N CA sing N N 556 THR N H sing N N 557 THR N H2 sing N N 558 THR CA C sing N N 559 THR CA CB sing N N 560 THR CA HA sing N N 561 THR C O doub N N 562 THR C OXT sing N N 563 THR CB OG1 sing N N 564 THR CB CG2 sing N N 565 THR CB HB sing N N 566 THR OG1 HG1 sing N N 567 THR CG2 HG21 sing N N 568 THR CG2 HG22 sing N N 569 THR CG2 HG23 sing N N 570 THR OXT HXT sing N N 571 TYR N CA sing N N 572 TYR N H sing N N 573 TYR N H2 sing N N 574 TYR CA C sing N N 575 TYR CA CB sing N N 576 TYR CA HA sing N N 577 TYR C O doub N N 578 TYR C OXT sing N N 579 TYR CB CG sing N N 580 TYR CB HB2 sing N N 581 TYR CB HB3 sing N N 582 TYR CG CD1 doub Y N 583 TYR CG CD2 sing Y N 584 TYR CD1 CE1 sing Y N 585 TYR CD1 HD1 sing N N 586 TYR CD2 CE2 doub Y N 587 TYR CD2 HD2 sing N N 588 TYR CE1 CZ doub Y N 589 TYR CE1 HE1 sing N N 590 TYR CE2 CZ sing Y N 591 TYR CE2 HE2 sing N N 592 TYR CZ OH sing N N 593 TYR OH HH sing N N 594 TYR OXT HXT sing N N 595 VAL N CA sing N N 596 VAL N H sing N N 597 VAL N H2 sing N N 598 VAL CA C sing N N 599 VAL CA CB sing N N 600 VAL CA HA sing N N 601 VAL C O doub N N 602 VAL C OXT sing N N 603 VAL CB CG1 sing N N 604 VAL CB CG2 sing N N 605 VAL CB HB sing N N 606 VAL CG1 HG11 sing N N 607 VAL CG1 HG12 sing N N 608 VAL CG1 HG13 sing N N 609 VAL CG2 HG21 sing N N 610 VAL CG2 HG22 sing N N 611 VAL CG2 HG23 sing N N 612 VAL OXT HXT sing N N 613 # _ndb_struct_conf_na.entry_id 3H4D _ndb_struct_conf_na.feature 'double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DA 1 1_555 C DT 9 1_555 0.100 -0.186 0.436 10.284 -0.071 -1.772 1 P_DA867:DT847_T P 867 ? T 847 ? 20 1 1 B DG 2 1_555 C DC 8 1_555 -0.170 0.066 0.026 4.821 1.150 0.322 2 P_DG868:DC846_T P 868 ? T 846 ? 19 1 1 B DG 3 1_555 C DC 7 1_555 -0.065 -0.028 -0.485 -1.633 -0.261 0.105 3 P_DG869:DC845_T P 869 ? T 845 ? 19 1 1 B DA 4 1_555 C DT 6 1_555 0.111 -0.077 -0.255 11.965 3.013 -2.577 4 P_DA870:DT844_T P 870 ? T 844 ? 20 1 1 B DC 5 1_555 C DG 5 1_555 -0.078 -0.146 -0.803 18.844 1.686 -2.268 5 P_DC871:DG843_T P 871 ? T 843 ? 19 1 1 B DC 6 1_555 C DG 4 1_555 -0.021 -0.177 -0.651 12.736 1.924 -3.448 6 P_DC872:DG842_T P 872 ? T 842 ? 19 1 1 B DOC 7 1_555 C DG 3 1_555 0.175 -0.108 -0.537 6.230 5.196 0.212 7 P_DOC873:DG841_T P 873 ? T 841 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DA 1 1_555 C DT 9 1_555 B DG 2 1_555 C DC 8 1_555 0.686 -0.930 3.500 1.572 2.089 31.022 -2.158 -0.958 3.461 3.897 -2.932 31.129 1 PP_DA867DG868:DC846DT847_TT P 867 ? T 847 ? P 868 ? T 846 ? 1 B DG 2 1_555 C DC 8 1_555 B DG 3 1_555 C DC 7 1_555 0.235 -0.653 3.608 3.964 -1.526 36.669 -0.803 0.225 3.637 -2.415 -6.275 36.905 2 PP_DG868DG869:DC845DC846_TT P 868 ? T 846 ? P 869 ? T 845 ? 1 B DG 3 1_555 C DC 7 1_555 B DA 4 1_555 C DT 6 1_555 -0.385 -0.213 3.061 -2.208 5.566 31.104 -1.350 0.325 2.998 10.260 4.071 31.661 3 PP_DG869DA870:DT844DC845_TT P 869 ? T 845 ? P 870 ? T 844 ? 1 B DA 4 1_555 C DT 6 1_555 B DC 5 1_555 C DG 5 1_555 0.463 -0.802 3.164 1.228 4.518 29.789 -2.419 -0.652 3.028 8.720 -2.371 30.146 4 PP_DA870DC871:DG843DT844_TT P 870 ? T 844 ? P 871 ? T 843 ? 1 B DC 5 1_555 C DG 5 1_555 B DC 6 1_555 C DG 4 1_555 -0.426 -1.604 3.529 -4.000 13.408 29.334 -5.201 0.068 2.603 24.778 7.391 32.434 5 PP_DC871DC872:DG842DG843_TT P 871 ? T 843 ? P 872 ? T 842 ? 1 B DC 6 1_555 C DG 4 1_555 B DOC 7 1_555 C DG 3 1_555 -0.534 -1.163 3.714 -1.702 4.392 26.752 -3.707 0.660 3.508 9.400 3.643 27.157 6 PP_DC872DOC873:DG841DG842_TT P 872 ? T 842 ? P 873 ? T 841 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'MAGNESIUM ION' MG 5 "2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE" DGT 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2ALZ _pdbx_initial_refinement_model.details 'PDB ENTRY 2ALZ' #