data_3H4Y # _entry.id 3H4Y # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3H4Y pdb_00003h4y 10.2210/pdb3h4y/pdb RCSB RCSB052697 ? ? WWPDB D_1000052697 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 394351 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3H4Y _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-04-21 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of putative chemotaxis protein (YP_009526.1) from DESULFOVIBRIO VULGARIS HILDENBOROUGH at 1.55 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3H4Y _cell.length_a 43.820 _cell.length_b 43.820 _cell.length_c 158.604 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3H4Y _symmetry.Int_Tables_number 92 _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'putative chemotaxis protein' 16642.891 1 ? ? ? ? 2 non-polymer syn 'CITRIC ACID' 192.124 1 ? ? ? ? 3 non-polymer syn '(4R)-2-METHYLPENTANE-2,4-DIOL' 118.174 1 ? ? ? ? 4 water nat water 18.015 139 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Chemotaxis protein CheX, putative' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)SVNGIEVAKPFIAATVNVLST(MSE)AGIQPQPGKPYVKKNNVAKGDVSAVIGITGHKNGSISVTFTKSCAIAL VKG(MSE)LGDDIQDILQDTKDAVGEVTN(MSE)ISGQARAGLAE(MSE)G(MSE)VFQGSTPSVI(MSE)GDGHTISHV TKSPI(MSE)AIPFLTNHGEFTVEFCFE ; _entity_poly.pdbx_seq_one_letter_code_can ;GMSVNGIEVAKPFIAATVNVLSTMAGIQPQPGKPYVKKNNVAKGDVSAVIGITGHKNGSISVTFTKSCAIALVKGMLGDD IQDILQDTKDAVGEVTNMISGQARAGLAEMGMVFQGSTPSVIMGDGHTISHVTKSPIMAIPFLTNHGEFTVEFCFE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 394351 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 SER n 1 4 VAL n 1 5 ASN n 1 6 GLY n 1 7 ILE n 1 8 GLU n 1 9 VAL n 1 10 ALA n 1 11 LYS n 1 12 PRO n 1 13 PHE n 1 14 ILE n 1 15 ALA n 1 16 ALA n 1 17 THR n 1 18 VAL n 1 19 ASN n 1 20 VAL n 1 21 LEU n 1 22 SER n 1 23 THR n 1 24 MSE n 1 25 ALA n 1 26 GLY n 1 27 ILE n 1 28 GLN n 1 29 PRO n 1 30 GLN n 1 31 PRO n 1 32 GLY n 1 33 LYS n 1 34 PRO n 1 35 TYR n 1 36 VAL n 1 37 LYS n 1 38 LYS n 1 39 ASN n 1 40 ASN n 1 41 VAL n 1 42 ALA n 1 43 LYS n 1 44 GLY n 1 45 ASP n 1 46 VAL n 1 47 SER n 1 48 ALA n 1 49 VAL n 1 50 ILE n 1 51 GLY n 1 52 ILE n 1 53 THR n 1 54 GLY n 1 55 HIS n 1 56 LYS n 1 57 ASN n 1 58 GLY n 1 59 SER n 1 60 ILE n 1 61 SER n 1 62 VAL n 1 63 THR n 1 64 PHE n 1 65 THR n 1 66 LYS n 1 67 SER n 1 68 CYS n 1 69 ALA n 1 70 ILE n 1 71 ALA n 1 72 LEU n 1 73 VAL n 1 74 LYS n 1 75 GLY n 1 76 MSE n 1 77 LEU n 1 78 GLY n 1 79 ASP n 1 80 ASP n 1 81 ILE n 1 82 GLN n 1 83 ASP n 1 84 ILE n 1 85 LEU n 1 86 GLN n 1 87 ASP n 1 88 THR n 1 89 LYS n 1 90 ASP n 1 91 ALA n 1 92 VAL n 1 93 GLY n 1 94 GLU n 1 95 VAL n 1 96 THR n 1 97 ASN n 1 98 MSE n 1 99 ILE n 1 100 SER n 1 101 GLY n 1 102 GLN n 1 103 ALA n 1 104 ARG n 1 105 ALA n 1 106 GLY n 1 107 LEU n 1 108 ALA n 1 109 GLU n 1 110 MSE n 1 111 GLY n 1 112 MSE n 1 113 VAL n 1 114 PHE n 1 115 GLN n 1 116 GLY n 1 117 SER n 1 118 THR n 1 119 PRO n 1 120 SER n 1 121 VAL n 1 122 ILE n 1 123 MSE n 1 124 GLY n 1 125 ASP n 1 126 GLY n 1 127 HIS n 1 128 THR n 1 129 ILE n 1 130 SER n 1 131 HIS n 1 132 VAL n 1 133 THR n 1 134 LYS n 1 135 SER n 1 136 PRO n 1 137 ILE n 1 138 MSE n 1 139 ALA n 1 140 ILE n 1 141 PRO n 1 142 PHE n 1 143 LEU n 1 144 THR n 1 145 ASN n 1 146 HIS n 1 147 GLY n 1 148 GLU n 1 149 PHE n 1 150 THR n 1 151 VAL n 1 152 GLU n 1 153 PHE n 1 154 CYS n 1 155 PHE n 1 156 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'DVU_0302, YP_009526.1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Desulfovibrio vulgaris str. Hildenborough' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 882 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q72FB2_DESVH _struct_ref.pdbx_db_accession Q72FB2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSVNGIEVAKPFIAATVNVLSTMAGIQPQPGKPYVKKNNVAKGDVSAVIGITGHKNGSISVTFTKSCAIALVKGMLGDDI QDILQDTKDAVGEVTNMISGQARAGLAEMGMVFQGSTPSVIMGDGHTISHVTKSPIMAIPFLTNHGEFTVEFCFE ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3H4Y _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 156 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q72FB2 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 155 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 155 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3H4Y _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q72FB2 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CIT non-polymer . 'CITRIC ACID' ? 'C6 H8 O7' 192.124 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MRD non-polymer . '(4R)-2-METHYLPENTANE-2,4-DIOL' ? 'C6 H14 O2' 118.174 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3H4Y # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.29 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 46.23 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 4.0 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '10.0000% MPD, 0.1M Citrate pH 4.0, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2009-03-26 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97904 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength 0.97904 _diffrn_source.pdbx_wavelength_list ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3H4Y _reflns.d_resolution_high 1.55 _reflns.d_resolution_low 29.399 _reflns.number_obs 23188 _reflns.pdbx_Rmerge_I_obs 0.113 _reflns.pdbx_netI_over_sigmaI 4.790 _reflns.pdbx_Rsym_value 0.113 _reflns.pdbx_redundancy 12.300 _reflns.percent_possible_obs 99.100 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.B_iso_Wilson_estimate 17.632 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.55 1.59 ? 11765 ? 0.935 0.8 0.935 ? 7.30 ? 1621 97.50 1 1 1.59 1.63 ? 11747 ? 0.801 1.0 0.801 ? 7.20 ? 1631 98.20 2 1 1.63 1.68 ? 11357 ? 0.669 1.1 0.669 ? 7.20 ? 1568 98.50 3 1 1.68 1.73 ? 11160 ? 0.564 1.3 0.564 ? 7.30 ? 1519 98.50 4 1 1.73 1.79 ? 14987 ? 0.579 1.3 0.579 ? 10.10 ? 1477 98.70 5 1 1.79 1.85 ? 16013 ? 0.483 1.5 0.483 ? 11.00 ? 1458 98.90 6 1 1.85 1.92 ? 17162 ? 0.368 1.9 0.368 ? 12.10 ? 1416 99.10 7 1 1.92 2.00 ? 19056 ? 0.285 2.5 0.285 ? 14.00 ? 1365 99.10 8 1 2.00 2.09 ? 20522 ? 0.239 3.0 0.239 ? 15.80 ? 1299 99.30 9 1 2.09 2.19 ? 20055 ? 0.194 3.7 0.194 ? 15.90 ? 1265 99.50 10 1 2.19 2.31 ? 18994 ? 0.168 3.9 0.168 ? 15.90 ? 1198 99.50 11 1 2.31 2.45 ? 17959 ? 0.140 5.0 0.140 ? 15.70 ? 1143 99.70 12 1 2.45 2.62 ? 16751 ? 0.128 5.5 0.128 ? 15.70 ? 1070 99.70 13 1 2.62 2.83 ? 15867 ? 0.107 6.5 0.107 ? 15.50 ? 1023 99.90 14 1 2.83 3.10 ? 14722 ? 0.084 7.9 0.084 ? 15.50 ? 948 99.90 15 1 3.10 3.47 ? 13052 ? 0.073 8.7 0.073 ? 15.20 ? 857 99.90 16 1 3.47 4.00 ? 11651 ? 0.069 9.0 0.069 ? 15.10 ? 773 99.90 17 1 4.00 4.90 ? 10008 ? 0.065 9.2 0.065 ? 14.70 ? 681 100.00 18 1 4.90 6.93 ? 7436 ? 0.073 8.1 0.073 ? 13.80 ? 538 100.00 19 1 6.93 29.41 ? 3992 ? 0.059 10.0 0.059 ? 11.80 ? 338 98.40 20 1 # _refine.entry_id 3H4Y _refine.ls_d_res_high 1.550 _refine.ls_d_res_low 29.399 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.720 _refine.ls_number_reflns_obs 23154 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1.HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2.ATOM RECORDS CONTAIN RESIDUAL B FACTORS ONLY. 3.A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4.CIT (CITRATE) AND (4R)-2-METHYLPENTANE-2,4-DIOL (MRD) FROM THE CRYSTALLIZATION AND CRYOPROTECTION CONDITIONS HAVE BEEN MODELED IN THE SOLVENT STRUCTURE. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.163 _refine.ls_R_factor_R_work 0.162 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.196 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1191 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 16.565 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.250 _refine.aniso_B[2][2] 0.250 _refine.aniso_B[3][3] -0.490 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.967 _refine.correlation_coeff_Fo_to_Fc_free 0.961 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.072 _refine.pdbx_overall_ESU_R_Free 0.076 _refine.overall_SU_ML 0.046 _refine.overall_SU_B 2.894 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 69.01 _refine.B_iso_min 3.83 _refine.occupancy_max 1.00 _refine.occupancy_min 0.25 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1115 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 21 _refine_hist.number_atoms_solvent 139 _refine_hist.number_atoms_total 1275 _refine_hist.d_res_high 1.550 _refine_hist.d_res_low 29.399 # loop_ _refine_ls_restr.type _refine_ls_restr.pdbx_refine_id _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 'X-RAY DIFFRACTION' 1207 0.015 0.022 ? ? r_bond_other_d 'X-RAY DIFFRACTION' 778 0.001 0.020 ? ? r_angle_refined_deg 'X-RAY DIFFRACTION' 1651 1.631 1.979 ? ? r_angle_other_deg 'X-RAY DIFFRACTION' 1952 0.931 3.000 ? ? r_dihedral_angle_1_deg 'X-RAY DIFFRACTION' 172 5.250 5.000 ? ? r_dihedral_angle_2_deg 'X-RAY DIFFRACTION' 38 35.099 26.316 ? ? r_dihedral_angle_3_deg 'X-RAY DIFFRACTION' 211 11.134 15.000 ? ? r_dihedral_angle_4_deg 'X-RAY DIFFRACTION' 1 13.648 15.000 ? ? r_chiral_restr 'X-RAY DIFFRACTION' 200 0.095 0.200 ? ? r_gen_planes_refined 'X-RAY DIFFRACTION' 1350 0.006 0.021 ? ? r_gen_planes_other 'X-RAY DIFFRACTION' 207 0.001 0.020 ? ? r_mcbond_it 'X-RAY DIFFRACTION' 790 1.589 3.000 ? ? r_mcbond_other 'X-RAY DIFFRACTION' 327 0.434 3.000 ? ? r_mcangle_it 'X-RAY DIFFRACTION' 1292 2.719 5.000 ? ? r_scbond_it 'X-RAY DIFFRACTION' 417 4.537 8.000 ? ? r_scangle_it 'X-RAY DIFFRACTION' 349 7.023 11.000 ? ? # _refine_ls_shell.d_res_high 1.550 _refine_ls_shell.d_res_low 1.590 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 97.140 _refine_ls_shell.number_reflns_R_work 1540 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.271 _refine_ls_shell.R_factor_R_free 0.300 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 92 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1632 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3H4Y _struct.title 'Crystal structure of putative chemotaxis protein (YP_009526.1) from DESULFOVIBRIO VULGARIS HILDENBOROUGH at 1.55 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;YP_009526.1, putative chemotaxis protein, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, HYDROLASE ; _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.entry_id 3H4Y # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 VAL A 9 ? GLY A 26 ? VAL A 8 GLY A 25 1 ? 18 HELX_P HELX_P2 2 THR A 65 ? GLY A 78 ? THR A 64 GLY A 77 1 ? 14 HELX_P HELX_P3 3 ASP A 83 ? MSE A 110 ? ASP A 82 MSE A 109 1 ? 28 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A THR 23 C ? ? ? 1_555 A MSE 24 N ? ? A THR 22 A MSE 23 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale2 covale both ? A MSE 24 C ? ? ? 1_555 A ALA 25 N ? ? A MSE 23 A ALA 24 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale3 covale both ? A GLY 75 C ? ? ? 1_555 A MSE 76 N ? ? A GLY 74 A MSE 75 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale4 covale both ? A MSE 76 C ? ? ? 1_555 A LEU 77 N ? ? A MSE 75 A LEU 76 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale5 covale both ? A ASN 97 C ? ? ? 1_555 A MSE 98 N ? ? A ASN 96 A MSE 97 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale6 covale both ? A MSE 98 C ? ? ? 1_555 A ILE 99 N ? ? A MSE 97 A ILE 98 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale7 covale both ? A GLU 109 C ? ? ? 1_555 A MSE 110 N ? ? A GLU 108 A MSE 109 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale8 covale both ? A MSE 110 C ? ? ? 1_555 A GLY 111 N ? ? A MSE 109 A GLY 110 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale9 covale both ? A GLY 111 C ? ? ? 1_555 A MSE 112 N ? ? A GLY 110 A MSE 111 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale10 covale both ? A MSE 112 C ? ? ? 1_555 A VAL 113 N ? ? A MSE 111 A VAL 112 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale11 covale both ? A ILE 122 C ? ? ? 1_555 A MSE 123 N ? ? A ILE 121 A MSE 122 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale12 covale both ? A MSE 123 C ? ? ? 1_555 A GLY 124 N ? ? A MSE 122 A GLY 123 1_555 ? ? ? ? ? ? ? 1.317 ? ? covale13 covale both ? A ILE 137 C ? ? ? 1_555 A MSE 138 N ? ? A ILE 136 A MSE 137 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale14 covale both ? A MSE 138 C ? ? ? 1_555 A ALA 139 N ? ? A MSE 137 A ALA 138 1_555 ? ? ? ? ? ? ? 1.328 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 30 ? PRO A 31 ? GLN A 29 PRO A 30 A 2 ILE A 137 ? THR A 144 ? ILE A 136 THR A 143 A 3 GLY A 147 ? GLU A 156 ? GLY A 146 GLU A 155 A 4 ASN A 57 ? PHE A 64 ? ASN A 56 PHE A 63 A 5 ALA A 42 ? GLY A 54 ? ALA A 41 GLY A 53 A 6 PHE A 114 ? GLY A 116 ? PHE A 113 GLY A 115 B 1 TYR A 35 ? LYS A 37 ? TYR A 34 LYS A 36 B 2 ILE A 137 ? THR A 144 ? ILE A 136 THR A 143 B 3 GLY A 147 ? GLU A 156 ? GLY A 146 GLU A 155 B 4 ASN A 57 ? PHE A 64 ? ASN A 56 PHE A 63 B 5 ALA A 42 ? GLY A 54 ? ALA A 41 GLY A 53 B 6 SER A 120 ? ILE A 129 ? SER A 119 ILE A 128 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLN A 30 ? N GLN A 29 O LEU A 143 ? O LEU A 142 A 2 3 N PHE A 142 ? N PHE A 141 O PHE A 149 ? O PHE A 148 A 3 4 O GLU A 152 ? O GLU A 151 N SER A 61 ? N SER A 60 A 4 5 O PHE A 64 ? O PHE A 63 N VAL A 46 ? N VAL A 45 A 5 6 N THR A 53 ? N THR A 52 O GLN A 115 ? O GLN A 114 B 1 2 N TYR A 35 ? N TYR A 34 O ALA A 139 ? O ALA A 138 B 2 3 N PHE A 142 ? N PHE A 141 O PHE A 149 ? O PHE A 148 B 3 4 O GLU A 152 ? O GLU A 151 N SER A 61 ? N SER A 60 B 4 5 O PHE A 64 ? O PHE A 63 N VAL A 46 ? N VAL A 45 B 5 6 N SER A 47 ? N SER A 46 O ILE A 122 ? O ILE A 121 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CIT 156 ? 9 'BINDING SITE FOR RESIDUE CIT A 156' AC2 Software A MRD 157 ? 5 'BINDING SITE FOR RESIDUE MRD A 157' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 LYS A 38 ? LYS A 37 . ? 1_555 ? 2 AC1 9 ASN A 39 ? ASN A 38 . ? 1_555 ? 3 AC1 9 GLN A 86 ? GLN A 85 . ? 7_555 ? 4 AC1 9 ASP A 90 ? ASP A 89 . ? 7_555 ? 5 AC1 9 THR A 133 ? THR A 132 . ? 1_555 ? 6 AC1 9 LYS A 134 ? LYS A 133 . ? 1_555 ? 7 AC1 9 HOH D . ? HOH A 269 . ? 1_555 ? 8 AC1 9 HOH D . ? HOH A 270 . ? 7_555 ? 9 AC1 9 HOH D . ? HOH A 295 . ? 7_555 ? 10 AC2 5 SER A 135 ? SER A 134 . ? 1_555 ? 11 AC2 5 PRO A 136 ? PRO A 135 . ? 1_555 ? 12 AC2 5 PHE A 153 ? PHE A 152 . ? 1_555 ? 13 AC2 5 CYS A 154 ? CYS A 153 . ? 1_555 ? 14 AC2 5 PHE A 155 ? PHE A 154 . ? 1_555 ? # _atom_sites.entry_id 3H4Y _atom_sites.fract_transf_matrix[1][1] 0.022821 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022821 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006305 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 ? ? ? A . n A 1 3 SER 3 2 2 SER SER A . n A 1 4 VAL 4 3 3 VAL VAL A . n A 1 5 ASN 5 4 4 ASN ASN A . n A 1 6 GLY 6 5 5 GLY GLY A . n A 1 7 ILE 7 6 6 ILE ILE A . n A 1 8 GLU 8 7 7 GLU GLU A . n A 1 9 VAL 9 8 8 VAL VAL A . n A 1 10 ALA 10 9 9 ALA ALA A . n A 1 11 LYS 11 10 10 LYS LYS A . n A 1 12 PRO 12 11 11 PRO PRO A . n A 1 13 PHE 13 12 12 PHE PHE A . n A 1 14 ILE 14 13 13 ILE ILE A . n A 1 15 ALA 15 14 14 ALA ALA A . n A 1 16 ALA 16 15 15 ALA ALA A . n A 1 17 THR 17 16 16 THR THR A . n A 1 18 VAL 18 17 17 VAL VAL A . n A 1 19 ASN 19 18 18 ASN ASN A . n A 1 20 VAL 20 19 19 VAL VAL A . n A 1 21 LEU 21 20 20 LEU LEU A . n A 1 22 SER 22 21 21 SER SER A . n A 1 23 THR 23 22 22 THR THR A . n A 1 24 MSE 24 23 23 MSE MSE A . n A 1 25 ALA 25 24 24 ALA ALA A . n A 1 26 GLY 26 25 25 GLY GLY A . n A 1 27 ILE 27 26 26 ILE ILE A . n A 1 28 GLN 28 27 27 GLN GLN A . n A 1 29 PRO 29 28 28 PRO PRO A . n A 1 30 GLN 30 29 29 GLN GLN A . n A 1 31 PRO 31 30 30 PRO PRO A . n A 1 32 GLY 32 31 31 GLY GLY A . n A 1 33 LYS 33 32 32 LYS LYS A . n A 1 34 PRO 34 33 33 PRO PRO A . n A 1 35 TYR 35 34 34 TYR TYR A . n A 1 36 VAL 36 35 35 VAL VAL A . n A 1 37 LYS 37 36 36 LYS LYS A . n A 1 38 LYS 38 37 37 LYS LYS A . n A 1 39 ASN 39 38 38 ASN ASN A . n A 1 40 ASN 40 39 39 ASN ASN A . n A 1 41 VAL 41 40 40 VAL VAL A . n A 1 42 ALA 42 41 41 ALA ALA A . n A 1 43 LYS 43 42 42 LYS LYS A . n A 1 44 GLY 44 43 43 GLY GLY A . n A 1 45 ASP 45 44 44 ASP ASP A . n A 1 46 VAL 46 45 45 VAL VAL A . n A 1 47 SER 47 46 46 SER SER A . n A 1 48 ALA 48 47 47 ALA ALA A . n A 1 49 VAL 49 48 48 VAL VAL A . n A 1 50 ILE 50 49 49 ILE ILE A . n A 1 51 GLY 51 50 50 GLY GLY A . n A 1 52 ILE 52 51 51 ILE ILE A . n A 1 53 THR 53 52 52 THR THR A . n A 1 54 GLY 54 53 53 GLY GLY A . n A 1 55 HIS 55 54 54 HIS HIS A . n A 1 56 LYS 56 55 55 LYS LYS A . n A 1 57 ASN 57 56 56 ASN ASN A . n A 1 58 GLY 58 57 57 GLY GLY A . n A 1 59 SER 59 58 58 SER SER A . n A 1 60 ILE 60 59 59 ILE ILE A . n A 1 61 SER 61 60 60 SER SER A . n A 1 62 VAL 62 61 61 VAL VAL A . n A 1 63 THR 63 62 62 THR THR A . n A 1 64 PHE 64 63 63 PHE PHE A . n A 1 65 THR 65 64 64 THR THR A . n A 1 66 LYS 66 65 65 LYS LYS A . n A 1 67 SER 67 66 66 SER SER A . n A 1 68 CYS 68 67 67 CYS CYS A . n A 1 69 ALA 69 68 68 ALA ALA A . n A 1 70 ILE 70 69 69 ILE ILE A . n A 1 71 ALA 71 70 70 ALA ALA A . n A 1 72 LEU 72 71 71 LEU LEU A . n A 1 73 VAL 73 72 72 VAL VAL A . n A 1 74 LYS 74 73 73 LYS LYS A . n A 1 75 GLY 75 74 74 GLY GLY A . n A 1 76 MSE 76 75 75 MSE MSE A . n A 1 77 LEU 77 76 76 LEU LEU A . n A 1 78 GLY 78 77 77 GLY GLY A . n A 1 79 ASP 79 78 78 ASP ASP A . n A 1 80 ASP 80 79 79 ASP ASP A . n A 1 81 ILE 81 80 80 ILE ILE A . n A 1 82 GLN 82 81 81 GLN GLN A . n A 1 83 ASP 83 82 82 ASP ASP A . n A 1 84 ILE 84 83 83 ILE ILE A . n A 1 85 LEU 85 84 84 LEU LEU A . n A 1 86 GLN 86 85 85 GLN GLN A . n A 1 87 ASP 87 86 86 ASP ASP A . n A 1 88 THR 88 87 87 THR THR A . n A 1 89 LYS 89 88 88 LYS LYS A . n A 1 90 ASP 90 89 89 ASP ASP A . n A 1 91 ALA 91 90 90 ALA ALA A . n A 1 92 VAL 92 91 91 VAL VAL A . n A 1 93 GLY 93 92 92 GLY GLY A . n A 1 94 GLU 94 93 93 GLU GLU A . n A 1 95 VAL 95 94 94 VAL VAL A . n A 1 96 THR 96 95 95 THR THR A . n A 1 97 ASN 97 96 96 ASN ASN A . n A 1 98 MSE 98 97 97 MSE MSE A . n A 1 99 ILE 99 98 98 ILE ILE A . n A 1 100 SER 100 99 99 SER SER A . n A 1 101 GLY 101 100 100 GLY GLY A . n A 1 102 GLN 102 101 101 GLN GLN A . n A 1 103 ALA 103 102 102 ALA ALA A . n A 1 104 ARG 104 103 103 ARG ARG A . n A 1 105 ALA 105 104 104 ALA ALA A . n A 1 106 GLY 106 105 105 GLY GLY A . n A 1 107 LEU 107 106 106 LEU LEU A . n A 1 108 ALA 108 107 107 ALA ALA A . n A 1 109 GLU 109 108 108 GLU GLU A . n A 1 110 MSE 110 109 109 MSE MSE A . n A 1 111 GLY 111 110 110 GLY GLY A . n A 1 112 MSE 112 111 111 MSE MSE A . n A 1 113 VAL 113 112 112 VAL VAL A . n A 1 114 PHE 114 113 113 PHE PHE A . n A 1 115 GLN 115 114 114 GLN GLN A . n A 1 116 GLY 116 115 115 GLY GLY A . n A 1 117 SER 117 116 116 SER SER A . n A 1 118 THR 118 117 117 THR THR A . n A 1 119 PRO 119 118 118 PRO PRO A . n A 1 120 SER 120 119 119 SER SER A . n A 1 121 VAL 121 120 120 VAL VAL A . n A 1 122 ILE 122 121 121 ILE ILE A . n A 1 123 MSE 123 122 122 MSE MSE A . n A 1 124 GLY 124 123 123 GLY GLY A . n A 1 125 ASP 125 124 124 ASP ASP A . n A 1 126 GLY 126 125 125 GLY GLY A . n A 1 127 HIS 127 126 126 HIS HIS A . n A 1 128 THR 128 127 127 THR THR A . n A 1 129 ILE 129 128 128 ILE ILE A . n A 1 130 SER 130 129 129 SER SER A . n A 1 131 HIS 131 130 130 HIS HIS A . n A 1 132 VAL 132 131 131 VAL VAL A . n A 1 133 THR 133 132 132 THR THR A . n A 1 134 LYS 134 133 133 LYS LYS A . n A 1 135 SER 135 134 134 SER SER A . n A 1 136 PRO 136 135 135 PRO PRO A . n A 1 137 ILE 137 136 136 ILE ILE A . n A 1 138 MSE 138 137 137 MSE MSE A . n A 1 139 ALA 139 138 138 ALA ALA A . n A 1 140 ILE 140 139 139 ILE ILE A . n A 1 141 PRO 141 140 140 PRO PRO A . n A 1 142 PHE 142 141 141 PHE PHE A . n A 1 143 LEU 143 142 142 LEU LEU A . n A 1 144 THR 144 143 143 THR THR A . n A 1 145 ASN 145 144 144 ASN ASN A . n A 1 146 HIS 146 145 145 HIS HIS A . n A 1 147 GLY 147 146 146 GLY GLY A . n A 1 148 GLU 148 147 147 GLU GLU A . n A 1 149 PHE 149 148 148 PHE PHE A . n A 1 150 THR 150 149 149 THR THR A . n A 1 151 VAL 151 150 150 VAL VAL A . n A 1 152 GLU 152 151 151 GLU GLU A . n A 1 153 PHE 153 152 152 PHE PHE A . n A 1 154 CYS 154 153 153 CYS CYS A . n A 1 155 PHE 155 154 154 PHE PHE A . n A 1 156 GLU 156 155 155 GLU GLU A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CIT 1 156 1 CIT CIT A . C 3 MRD 1 157 2 MRD MRD A . D 4 HOH 1 158 3 HOH HOH A . D 4 HOH 2 159 4 HOH HOH A . D 4 HOH 3 160 5 HOH HOH A . D 4 HOH 4 161 6 HOH HOH A . D 4 HOH 5 162 7 HOH HOH A . D 4 HOH 6 163 8 HOH HOH A . D 4 HOH 7 164 9 HOH HOH A . D 4 HOH 8 165 10 HOH HOH A . D 4 HOH 9 166 11 HOH HOH A . D 4 HOH 10 167 12 HOH HOH A . D 4 HOH 11 168 13 HOH HOH A . D 4 HOH 12 169 14 HOH HOH A . D 4 HOH 13 170 15 HOH HOH A . D 4 HOH 14 171 16 HOH HOH A . D 4 HOH 15 172 17 HOH HOH A . D 4 HOH 16 173 18 HOH HOH A . D 4 HOH 17 174 19 HOH HOH A . D 4 HOH 18 175 20 HOH HOH A . D 4 HOH 19 176 21 HOH HOH A . D 4 HOH 20 177 22 HOH HOH A . D 4 HOH 21 178 23 HOH HOH A . D 4 HOH 22 179 24 HOH HOH A . D 4 HOH 23 180 25 HOH HOH A . D 4 HOH 24 181 26 HOH HOH A . D 4 HOH 25 182 27 HOH HOH A . D 4 HOH 26 183 28 HOH HOH A . D 4 HOH 27 184 29 HOH HOH A . D 4 HOH 28 185 30 HOH HOH A . D 4 HOH 29 186 31 HOH HOH A . D 4 HOH 30 187 32 HOH HOH A . D 4 HOH 31 188 33 HOH HOH A . D 4 HOH 32 189 34 HOH HOH A . D 4 HOH 33 190 35 HOH HOH A . D 4 HOH 34 191 36 HOH HOH A . D 4 HOH 35 192 37 HOH HOH A . D 4 HOH 36 193 38 HOH HOH A . D 4 HOH 37 194 39 HOH HOH A . D 4 HOH 38 195 40 HOH HOH A . D 4 HOH 39 196 41 HOH HOH A . D 4 HOH 40 197 42 HOH HOH A . D 4 HOH 41 198 43 HOH HOH A . D 4 HOH 42 199 44 HOH HOH A . D 4 HOH 43 200 45 HOH HOH A . D 4 HOH 44 201 46 HOH HOH A . D 4 HOH 45 202 47 HOH HOH A . D 4 HOH 46 203 48 HOH HOH A . D 4 HOH 47 204 49 HOH HOH A . D 4 HOH 48 205 50 HOH HOH A . D 4 HOH 49 206 51 HOH HOH A . D 4 HOH 50 207 52 HOH HOH A . D 4 HOH 51 208 53 HOH HOH A . D 4 HOH 52 209 54 HOH HOH A . D 4 HOH 53 210 55 HOH HOH A . D 4 HOH 54 211 56 HOH HOH A . D 4 HOH 55 212 57 HOH HOH A . D 4 HOH 56 213 58 HOH HOH A . D 4 HOH 57 214 59 HOH HOH A . D 4 HOH 58 215 60 HOH HOH A . D 4 HOH 59 216 61 HOH HOH A . D 4 HOH 60 217 62 HOH HOH A . D 4 HOH 61 218 63 HOH HOH A . D 4 HOH 62 219 64 HOH HOH A . D 4 HOH 63 220 65 HOH HOH A . D 4 HOH 64 221 66 HOH HOH A . D 4 HOH 65 222 67 HOH HOH A . D 4 HOH 66 223 68 HOH HOH A . D 4 HOH 67 224 69 HOH HOH A . D 4 HOH 68 225 70 HOH HOH A . D 4 HOH 69 226 71 HOH HOH A . D 4 HOH 70 227 72 HOH HOH A . D 4 HOH 71 228 73 HOH HOH A . D 4 HOH 72 229 74 HOH HOH A . D 4 HOH 73 230 75 HOH HOH A . D 4 HOH 74 231 76 HOH HOH A . D 4 HOH 75 232 77 HOH HOH A . D 4 HOH 76 233 78 HOH HOH A . D 4 HOH 77 234 79 HOH HOH A . D 4 HOH 78 235 80 HOH HOH A . D 4 HOH 79 236 81 HOH HOH A . D 4 HOH 80 237 82 HOH HOH A . D 4 HOH 81 238 83 HOH HOH A . D 4 HOH 82 239 84 HOH HOH A . D 4 HOH 83 240 85 HOH HOH A . D 4 HOH 84 241 86 HOH HOH A . D 4 HOH 85 242 87 HOH HOH A . D 4 HOH 86 243 88 HOH HOH A . D 4 HOH 87 244 89 HOH HOH A . D 4 HOH 88 245 90 HOH HOH A . D 4 HOH 89 246 91 HOH HOH A . D 4 HOH 90 247 92 HOH HOH A . D 4 HOH 91 248 93 HOH HOH A . D 4 HOH 92 249 94 HOH HOH A . D 4 HOH 93 250 95 HOH HOH A . D 4 HOH 94 251 96 HOH HOH A . D 4 HOH 95 252 97 HOH HOH A . D 4 HOH 96 253 98 HOH HOH A . D 4 HOH 97 254 99 HOH HOH A . D 4 HOH 98 255 100 HOH HOH A . D 4 HOH 99 256 101 HOH HOH A . D 4 HOH 100 257 102 HOH HOH A . D 4 HOH 101 258 103 HOH HOH A . D 4 HOH 102 259 104 HOH HOH A . D 4 HOH 103 260 105 HOH HOH A . D 4 HOH 104 261 106 HOH HOH A . D 4 HOH 105 262 107 HOH HOH A . D 4 HOH 106 263 108 HOH HOH A . D 4 HOH 107 264 109 HOH HOH A . D 4 HOH 108 265 110 HOH HOH A . D 4 HOH 109 266 111 HOH HOH A . D 4 HOH 110 267 112 HOH HOH A . D 4 HOH 111 268 113 HOH HOH A . D 4 HOH 112 269 114 HOH HOH A . D 4 HOH 113 270 115 HOH HOH A . D 4 HOH 114 271 116 HOH HOH A . D 4 HOH 115 272 117 HOH HOH A . D 4 HOH 116 273 118 HOH HOH A . D 4 HOH 117 274 119 HOH HOH A . D 4 HOH 118 275 120 HOH HOH A . D 4 HOH 119 276 121 HOH HOH A . D 4 HOH 120 277 122 HOH HOH A . D 4 HOH 121 278 123 HOH HOH A . D 4 HOH 122 279 124 HOH HOH A . D 4 HOH 123 280 125 HOH HOH A . D 4 HOH 124 281 126 HOH HOH A . D 4 HOH 125 282 127 HOH HOH A . D 4 HOH 126 283 128 HOH HOH A . D 4 HOH 127 284 129 HOH HOH A . D 4 HOH 128 285 130 HOH HOH A . D 4 HOH 129 286 131 HOH HOH A . D 4 HOH 130 287 132 HOH HOH A . D 4 HOH 131 288 133 HOH HOH A . D 4 HOH 132 289 134 HOH HOH A . D 4 HOH 133 290 135 HOH HOH A . D 4 HOH 134 291 136 HOH HOH A . D 4 HOH 135 292 137 HOH HOH A . D 4 HOH 136 293 138 HOH HOH A . D 4 HOH 137 294 139 HOH HOH A . D 4 HOH 138 295 140 HOH HOH A . D 4 HOH 139 296 141 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 24 A MSE 23 ? MET SELENOMETHIONINE 2 A MSE 76 A MSE 75 ? MET SELENOMETHIONINE 3 A MSE 98 A MSE 97 ? MET SELENOMETHIONINE 4 A MSE 110 A MSE 109 ? MET SELENOMETHIONINE 5 A MSE 112 A MSE 111 ? MET SELENOMETHIONINE 6 A MSE 123 A MSE 122 ? MET SELENOMETHIONINE 7 A MSE 138 A MSE 137 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3630 ? 1 MORE -1 ? 1 'SSA (A^2)' 12150 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_555 y,x,-z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-05-05 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' software 3 4 'Structure model' struct_conn 4 5 'Structure model' database_2 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 12.1943 _pdbx_refine_tls.origin_y 5.2364 _pdbx_refine_tls.origin_z 10.5058 _pdbx_refine_tls.T[1][1] 0.0096 _pdbx_refine_tls.T[2][2] 0.0592 _pdbx_refine_tls.T[3][3] 0.0398 _pdbx_refine_tls.T[1][2] 0.0022 _pdbx_refine_tls.T[1][3] 0.0051 _pdbx_refine_tls.T[2][3] -0.0048 _pdbx_refine_tls.L[1][1] 0.1283 _pdbx_refine_tls.L[2][2] 0.4970 _pdbx_refine_tls.L[3][3] 0.9723 _pdbx_refine_tls.L[1][2] 0.0227 _pdbx_refine_tls.L[1][3] -0.1900 _pdbx_refine_tls.L[2][3] -0.0963 _pdbx_refine_tls.S[1][1] -0.0178 _pdbx_refine_tls.S[2][2] 0.0356 _pdbx_refine_tls.S[3][3] -0.0178 _pdbx_refine_tls.S[1][2] -0.0740 _pdbx_refine_tls.S[1][3] 0.0196 _pdbx_refine_tls.S[2][3] -0.0287 _pdbx_refine_tls.S[2][1] -0.0507 _pdbx_refine_tls.S[3][1] 0.0567 _pdbx_refine_tls.S[3][2] 0.0453 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.beg_auth_seq_id 2 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 155 _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.selection ? # _phasing.method SAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.5.0053 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SOLVE . ? program 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 SCALA 3.2.5 5/04/2004 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 5 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 7 # _pdbx_entry_details.entry_id 3H4Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 79 ? CG ? A ASP 80 CG 2 1 Y 1 A ASP 79 ? OD1 ? A ASP 80 OD1 3 1 Y 1 A ASP 79 ? OD2 ? A ASP 80 OD2 4 1 Y 1 A GLN 81 ? CD ? A GLN 82 CD 5 1 Y 1 A GLN 81 ? OE1 ? A GLN 82 OE1 6 1 Y 1 A GLN 81 ? NE2 ? A GLN 82 NE2 7 1 Y 1 A LYS 133 ? CE ? A LYS 134 CE 8 1 Y 1 A LYS 133 ? NZ ? A LYS 134 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A MSE 1 ? A MSE 2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CITRIC ACID' CIT 3 '(4R)-2-METHYLPENTANE-2,4-DIOL' MRD 4 water HOH #