data_3H50 # _entry.id 3H50 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3H50 pdb_00003h50 10.2210/pdb3h50/pdb RCSB RCSB052699 ? ? WWPDB D_1000052699 ? ? # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2009-05-05 _pdbx_database_PDB_obs_spr.pdb_id 3H50 _pdbx_database_PDB_obs_spr.replace_pdb_id 2ILB _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 367064 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3H50 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-04-21 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Conformational changes associated with the binding of zinc acetate at the putative active site of XcTcmJ, a cupin from Xanthomonas campestris pv. campestris. ; _citation.journal_abbrev 'Acta Crystallogr.,Sect.F' _citation.journal_volume 66 _citation.page_first 1347 _citation.page_last 1353 _citation.year 2010 _citation.journal_id_ASTM ? _citation.country DK _citation.journal_id_ISSN 1744-3091 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20944231 _citation.pdbx_database_id_DOI 10.1107/S1744309109021988 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Axelrod, H.L.' 1 ? primary 'Kozbial, P.' 2 ? primary 'McMullan, D.' 3 ? primary 'Krishna, S.S.' 4 ? primary 'Miller, M.D.' 5 ? primary 'Abdubek, P.' 6 ? primary 'Acosta, C.' 7 ? primary 'Astakhova, T.' 8 ? primary 'Carlton, D.' 9 ? primary 'Caruthers, J.' 10 ? primary 'Chiu, H.J.' 11 ? primary 'Clayton, T.' 12 ? primary 'Deller, M.C.' 13 ? primary 'Duan, L.' 14 ? primary 'Elias, Y.' 15 ? primary 'Feuerhelm, J.' 16 ? primary 'Grzechnik, S.K.' 17 ? primary 'Grant, J.C.' 18 ? primary 'Han, G.W.' 19 ? primary 'Jaroszewski, L.' 20 ? primary 'Jin, K.K.' 21 ? primary 'Klock, H.E.' 22 ? primary 'Knuth, M.W.' 23 ? primary 'Kumar, A.' 24 ? primary 'Marciano, D.' 25 ? primary 'Morse, A.T.' 26 ? primary 'Murphy, K.D.' 27 ? primary 'Nigoghossian, E.' 28 ? primary 'Okach, L.' 29 ? primary 'Oommachen, S.' 30 ? primary 'Paulsen, J.' 31 ? primary 'Reyes, R.' 32 ? primary 'Rife, C.L.' 33 ? primary 'Tien, H.J.' 34 ? primary 'Trout, C.V.' 35 ? primary 'van den Bedem, H.' 36 ? primary 'Weekes, D.' 37 ? primary 'White, A.' 38 ? primary 'Xu, Q.' 39 ? primary 'Zubieta, C.' 40 ? primary 'Hodgson, K.O.' 41 ? primary 'Wooley, J.' 42 ? primary 'Elsliger, M.A.' 43 ? primary 'Deacon, A.M.' 44 ? primary 'Godzik, A.' 45 ? primary 'Lesley, S.A.' 46 ? primary 'Wilson, I.A.' 47 ? # _cell.entry_id 3H50 _cell.length_a 48.920 _cell.length_b 72.030 _cell.length_c 32.750 _cell.angle_alpha 90.000 _cell.angle_beta 110.760 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3H50 _symmetry.Int_Tables_number 5 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Tetracenomycin polyketide synthesis protein' 12329.295 1 ? ? ? ? 2 non-polymer syn 'ZINC ION' 65.409 4 ? ? ? ? 3 non-polymer syn 'ACETATE ION' 59.044 2 ? ? ? ? 4 water nat water 18.015 152 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)QYATLELNNAFKVLFSLRQVQAAE(MSE)VIAPGDREGGPDNRHRGADQWLFVVDGAGEAIVDGHTQALQAGSL IAIERGQAHEIRNTGDTPLKTVNFYHPPAYDAQGEPLPAGEG ; _entity_poly.pdbx_seq_one_letter_code_can ;GMQYATLELNNAFKVLFSLRQVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIVDGHTQALQAGSLIAIERGQA HEIRNTGDTPLKTVNFYHPPAYDAQGEPLPAGEG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 367064 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 GLN n 1 4 TYR n 1 5 ALA n 1 6 THR n 1 7 LEU n 1 8 GLU n 1 9 LEU n 1 10 ASN n 1 11 ASN n 1 12 ALA n 1 13 PHE n 1 14 LYS n 1 15 VAL n 1 16 LEU n 1 17 PHE n 1 18 SER n 1 19 LEU n 1 20 ARG n 1 21 GLN n 1 22 VAL n 1 23 GLN n 1 24 ALA n 1 25 ALA n 1 26 GLU n 1 27 MSE n 1 28 VAL n 1 29 ILE n 1 30 ALA n 1 31 PRO n 1 32 GLY n 1 33 ASP n 1 34 ARG n 1 35 GLU n 1 36 GLY n 1 37 GLY n 1 38 PRO n 1 39 ASP n 1 40 ASN n 1 41 ARG n 1 42 HIS n 1 43 ARG n 1 44 GLY n 1 45 ALA n 1 46 ASP n 1 47 GLN n 1 48 TRP n 1 49 LEU n 1 50 PHE n 1 51 VAL n 1 52 VAL n 1 53 ASP n 1 54 GLY n 1 55 ALA n 1 56 GLY n 1 57 GLU n 1 58 ALA n 1 59 ILE n 1 60 VAL n 1 61 ASP n 1 62 GLY n 1 63 HIS n 1 64 THR n 1 65 GLN n 1 66 ALA n 1 67 LEU n 1 68 GLN n 1 69 ALA n 1 70 GLY n 1 71 SER n 1 72 LEU n 1 73 ILE n 1 74 ALA n 1 75 ILE n 1 76 GLU n 1 77 ARG n 1 78 GLY n 1 79 GLN n 1 80 ALA n 1 81 HIS n 1 82 GLU n 1 83 ILE n 1 84 ARG n 1 85 ASN n 1 86 THR n 1 87 GLY n 1 88 ASP n 1 89 THR n 1 90 PRO n 1 91 LEU n 1 92 LYS n 1 93 THR n 1 94 VAL n 1 95 ASN n 1 96 PHE n 1 97 TYR n 1 98 HIS n 1 99 PRO n 1 100 PRO n 1 101 ALA n 1 102 TYR n 1 103 ASP n 1 104 ALA n 1 105 GLN n 1 106 GLY n 1 107 GLU n 1 108 PRO n 1 109 LEU n 1 110 PRO n 1 111 ALA n 1 112 GLY n 1 113 GLU n 1 114 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'NP_636471.1, tcmJ, XCC1096' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Xanthomonas campestris pv. campestris' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 340 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8PBM3_XANCP _struct_ref.pdbx_db_accession Q8PBM3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MQYATLELNNAFKVLFSLRQVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIVDGHTQALQAGSLIAIERGQAH EIRNTGDTPLKTVNFYHPPAYDAQGEPLPAGEG ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3H50 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 114 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8PBM3 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 113 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 113 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3H50 _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q8PBM3 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3H50 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.19 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 43.79 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '35.0% 2-propanol, 0.2M Zn(OAc)2, 0.1M Imidazole pH 8.0, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2006-08-05 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.918370 1.0 2 0.979616 1.0 3 0.979305 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list 0.918370,0.979616,0.979305 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3H50 _reflns.d_resolution_high 1.60 _reflns.d_resolution_low 28.502 _reflns.number_obs 13913 _reflns.pdbx_Rmerge_I_obs 0.105 _reflns.percent_possible_obs 96.800 _reflns.B_iso_Wilson_estimate 11.422 _reflns.observed_criterion_sigma_I -3.00 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 9.990 _reflns.pdbx_redundancy 7.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.59 1.65 8850 ? 2430 0.610 1.9 ? ? ? ? ? 80.30 1 1 1.65 1.71 9471 ? 2496 0.535 2.3 ? ? ? ? ? 98.60 2 1 1.71 1.79 10553 ? 2860 0.424 3.0 ? ? ? ? ? 98.60 3 1 1.79 1.88 10112 ? 2689 0.341 3.8 ? ? ? ? ? 98.90 4 1 1.88 2.00 9653 ? 2816 0.233 5.7 ? ? ? ? ? 98.00 5 1 2.00 2.16 10465 ? 2905 0.167 7.9 ? ? ? ? ? 98.70 6 1 2.16 2.37 9838 ? 2696 0.123 10.4 ? ? ? ? ? 99.30 7 1 2.37 2.72 10648 ? 2904 0.096 12.7 ? ? ? ? ? 99.10 8 1 2.72 3.42 10213 ? 2742 0.055 20.6 ? ? ? ? ? 99.40 9 1 3.42 28.502 10350 ? 2813 0.034 29.8 ? ? ? ? ? 98.40 10 1 # _refine.entry_id 3H50 _refine.ls_d_res_high 1.600 _refine.ls_d_res_low 28.502 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.900 _refine.ls_number_reflns_obs 13912 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1). HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 2). ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY 3). ZINC WAS MODELED IN FOUR SITES THAT COINCIDE WITH PEAKS IN THE ANOMALOUS DIFFERENCE FOURIER. X-RAY FLUORESCENCE MEASUREMENTS CONFIRM THAT ZINC IS PRESENT AND NICKEL IS ABSENT FROM THE SAMPLE. 4). ACETATE MOLECULES FROM THE CRYSTALLIZATION SOLUTIONS HAVE BEEN MODELED INTO THE STRUCTURE. 5). UNEXPLAINED ELECTRON DENSITIES WERE OBSERVED WITHIN COORDINATION DISTANCE OF ZN 2, ZN 3, AND ZN 4. LIGANDS WERE NOT MODELED INTO THESE ELECTRON DENSITIES. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.184 _refine.ls_R_factor_R_work 0.182 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.220 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 696 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 13.120 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -1.160 _refine.aniso_B[2][2] 1.290 _refine.aniso_B[3][3] 0.050 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.270 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.950 _refine.correlation_coeff_Fo_to_Fc_free 0.932 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.100 _refine.pdbx_overall_ESU_R_Free 0.100 _refine.overall_SU_ML 0.074 _refine.overall_SU_B 3.667 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 52.35 _refine.B_iso_min 3.48 _refine.occupancy_max 1.00 _refine.occupancy_min 0.50 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 855 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 12 _refine_hist.number_atoms_solvent 152 _refine_hist.number_atoms_total 1019 _refine_hist.d_res_high 1.600 _refine_hist.d_res_low 28.502 # loop_ _refine_ls_restr.type _refine_ls_restr.pdbx_refine_id _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 'X-RAY DIFFRACTION' 892 0.014 0.021 ? ? r_bond_other_d 'X-RAY DIFFRACTION' 579 0.001 0.020 ? ? r_angle_refined_deg 'X-RAY DIFFRACTION' 1215 1.418 1.953 ? ? r_angle_other_deg 'X-RAY DIFFRACTION' 1414 0.874 3.000 ? ? r_dihedral_angle_1_deg 'X-RAY DIFFRACTION' 117 6.621 5.000 ? ? r_dihedral_angle_2_deg 'X-RAY DIFFRACTION' 45 36.853 25.111 ? ? r_dihedral_angle_3_deg 'X-RAY DIFFRACTION' 130 10.090 15.000 ? ? r_dihedral_angle_4_deg 'X-RAY DIFFRACTION' 5 11.829 15.000 ? ? r_chiral_restr 'X-RAY DIFFRACTION' 129 0.085 0.200 ? ? r_gen_planes_refined 'X-RAY DIFFRACTION' 1047 0.006 0.020 ? ? r_gen_planes_other 'X-RAY DIFFRACTION' 173 0.001 0.020 ? ? r_nbd_refined 'X-RAY DIFFRACTION' 138 0.207 0.200 ? ? r_nbd_other 'X-RAY DIFFRACTION' 602 0.193 0.200 ? ? r_nbtor_refined 'X-RAY DIFFRACTION' 407 0.173 0.200 ? ? r_nbtor_other 'X-RAY DIFFRACTION' 461 0.083 0.200 ? ? r_xyhbond_nbd_refined 'X-RAY DIFFRACTION' 95 0.157 0.200 ? ? r_metal_ion_refined 'X-RAY DIFFRACTION' 2 0.064 0.200 ? ? r_symmetry_vdw_refined 'X-RAY DIFFRACTION' 15 0.204 0.200 ? ? r_symmetry_vdw_other 'X-RAY DIFFRACTION' 42 0.217 0.200 ? ? r_symmetry_hbond_refined 'X-RAY DIFFRACTION' 17 0.137 0.200 ? ? r_symmetry_metal_ion_refined 'X-RAY DIFFRACTION' 4 0.048 0.200 ? ? r_mcbond_it 'X-RAY DIFFRACTION' 627 0.941 2.000 ? ? r_mcbond_other 'X-RAY DIFFRACTION' 236 0.225 2.000 ? ? r_mcangle_it 'X-RAY DIFFRACTION' 909 1.281 3.000 ? ? r_scbond_it 'X-RAY DIFFRACTION' 341 0.957 2.000 ? ? r_scangle_it 'X-RAY DIFFRACTION' 304 1.377 3.000 ? ? # _refine_ls_shell.d_res_high 1.599 _refine_ls_shell.d_res_low 1.641 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 96.470 _refine_ls_shell.number_reflns_R_work 965 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.235 _refine_ls_shell.R_factor_R_free 0.242 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 45 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1010 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3H50 _struct.title ;CRYSTAL STRUCTURE OF A TETRACENOMYCIN POLYKETIDE SYNTHESIS PROTEIN (TCMJ) FROM XANTHOMONAS CAMPESTRIS PV. CAMPESTRIS AT 1.60 A RESOLUTION ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;TETRACENOMYCIN POLYKETIDE SYNTHESIS PROTEIN, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-2, BIOSYNTHETIC PROTEIN ; _struct_keywords.pdbx_keywords 'BIOSYNTHETIC PROTEIN' _struct_keywords.entry_id 3H50 # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 3 ? G N N 3 ? H N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id LEU _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 109 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id GLU _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 113 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id LEU _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 108 _struct_conf.end_auth_comp_id GLU _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 112 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLY 1 C ? ? ? 1_555 A MSE 2 N ? ? A GLY 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale2 covale both ? A MSE 2 C ? ? ? 1_555 A GLN 3 N ? ? A MSE 1 A GLN 2 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale3 covale both ? A GLU 26 C ? ? ? 1_555 A MSE 27 N ? ? A GLU 25 A MSE 26 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale4 covale both ? A MSE 27 C ? ? ? 1_555 A VAL 28 N ? ? A MSE 26 A VAL 27 1_555 ? ? ? ? ? ? ? 1.341 ? ? metalc1 metalc ? ? A ASP 39 OD2 ? ? ? 1_555 C ZN . ZN ? ? A ASP 38 A ZN 115 1_555 ? ? ? ? ? ? ? 1.940 ? ? metalc2 metalc ? ? A HIS 42 NE2 ? ? ? 1_555 B ZN . ZN ? ? A HIS 41 A ZN 114 1_555 ? ? ? ? ? ? ? 2.017 ? ? metalc3 metalc ? ? A GLN 47 OE1 ? ? ? 1_555 B ZN . ZN ? ? A GLN 46 A ZN 114 1_555 ? ? ? ? ? ? ? 2.061 ? ? metalc4 metalc ? ? A GLU 76 OE2 ? ? ? 1_555 D ZN . ZN ? ? A GLU 75 A ZN 116 1_555 ? ? ? ? ? ? ? 2.054 ? ? metalc5 metalc ? ? A HIS 81 NE2 ? ? ? 1_555 B ZN . ZN ? ? A HIS 80 A ZN 114 1_555 ? ? ? ? ? ? ? 2.172 ? ? metalc6 metalc ? ? A HIS 98 NE2 ? ? ? 1_555 E ZN . ZN ? ? A HIS 97 A ZN 117 1_555 ? ? ? ? ? ? ? 2.255 ? ? metalc7 metalc ? ? B ZN . ZN ? ? ? 1_555 F ACT . O ? ? A ZN 114 A ACT 118 1_555 ? ? ? ? ? ? ? 2.168 ? ? metalc8 metalc ? ? B ZN . ZN ? ? ? 1_555 F ACT . OXT ? ? A ZN 114 A ACT 118 1_555 ? ? ? ? ? ? ? 2.243 ? ? metalc9 metalc ? ? B ZN . ZN ? ? ? 1_555 H HOH . O ? ? A ZN 114 A HOH 181 1_555 ? ? ? ? ? ? ? 2.311 ? ? metalc10 metalc ? ? D ZN . ZN ? ? ? 1_555 G ACT . OXT ? ? A ZN 116 A ACT 119 1_555 ? ? ? ? ? ? ? 2.055 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id HIS _struct_mon_prot_cis.label_seq_id 98 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id HIS _struct_mon_prot_cis.auth_seq_id 97 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 99 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 98 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -10.93 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 14 ? LEU A 19 ? LYS A 13 LEU A 18 A 2 VAL A 22 ? ILE A 29 ? VAL A 21 ILE A 28 A 3 LEU A 91 ? HIS A 98 ? LEU A 90 HIS A 97 A 4 ASP A 46 ? ASP A 53 ? ASP A 45 ASP A 52 A 5 LEU A 72 ? ILE A 75 ? LEU A 71 ILE A 74 B 1 ARG A 34 ? GLY A 36 ? ARG A 33 GLY A 35 B 2 HIS A 81 ? ASN A 85 ? HIS A 80 ASN A 84 B 3 GLY A 56 ? VAL A 60 ? GLY A 55 VAL A 59 B 4 HIS A 63 ? LEU A 67 ? HIS A 62 LEU A 66 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 14 ? N LYS A 13 O GLU A 26 ? O GLU A 25 A 2 3 N GLN A 23 ? N GLN A 22 O TYR A 97 ? O TYR A 96 A 3 4 O PHE A 96 ? O PHE A 95 N TRP A 48 ? N TRP A 47 A 4 5 N GLN A 47 ? N GLN A 46 O ILE A 75 ? O ILE A 74 B 1 2 N GLU A 35 ? N GLU A 34 O ILE A 83 ? O ILE A 82 B 2 3 O ARG A 84 ? O ARG A 83 N GLU A 57 ? N GLU A 56 B 3 4 N GLY A 56 ? N GLY A 55 O LEU A 67 ? O LEU A 66 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 114 ? 5 'BINDING SITE FOR RESIDUE ZN A 114' AC2 Software A ZN 115 ? 3 'BINDING SITE FOR RESIDUE ZN A 115' AC3 Software A ZN 116 ? 4 'BINDING SITE FOR RESIDUE ZN A 116' AC4 Software A ZN 117 ? 2 'BINDING SITE FOR RESIDUE ZN A 117' AC5 Software A ACT 118 ? 9 'BINDING SITE FOR RESIDUE ACT A 118' AC6 Software A ACT 119 ? 8 'BINDING SITE FOR RESIDUE ACT A 119' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 HIS A 42 ? HIS A 41 . ? 1_555 ? 2 AC1 5 GLN A 47 ? GLN A 46 . ? 1_555 ? 3 AC1 5 HIS A 81 ? HIS A 80 . ? 1_555 ? 4 AC1 5 ACT F . ? ACT A 118 . ? 1_555 ? 5 AC1 5 HOH H . ? HOH A 181 . ? 1_555 ? 6 AC2 3 ASP A 39 ? ASP A 38 . ? 1_555 ? 7 AC2 3 HIS A 63 ? HIS A 62 . ? 2_556 ? 8 AC2 3 GLU A 107 ? GLU A 106 . ? 2_555 ? 9 AC3 4 ARG A 20 ? ARG A 19 . ? 2_656 ? 10 AC3 4 GLU A 76 ? GLU A 75 . ? 1_555 ? 11 AC3 4 ASP A 88 ? ASP A 87 . ? 4_546 ? 12 AC3 4 ACT G . ? ACT A 119 . ? 1_555 ? 13 AC4 2 HIS A 98 ? HIS A 97 . ? 1_555 ? 14 AC4 2 HIS A 98 ? HIS A 97 . ? 2_656 ? 15 AC5 9 GLU A 35 ? GLU A 34 . ? 1_555 ? 16 AC5 9 GLY A 36 ? GLY A 35 . ? 1_555 ? 17 AC5 9 ASN A 40 ? ASN A 39 . ? 1_555 ? 18 AC5 9 HIS A 42 ? HIS A 41 . ? 1_555 ? 19 AC5 9 GLN A 47 ? GLN A 46 . ? 1_555 ? 20 AC5 9 HIS A 81 ? HIS A 80 . ? 1_555 ? 21 AC5 9 ZN B . ? ZN A 114 . ? 1_555 ? 22 AC5 9 HOH H . ? HOH A 181 . ? 1_555 ? 23 AC5 9 HOH H . ? HOH A 219 . ? 1_555 ? 24 AC6 8 ARG A 20 ? ARG A 19 . ? 2_656 ? 25 AC6 8 GLU A 76 ? GLU A 75 . ? 1_555 ? 26 AC6 8 ASP A 88 ? ASP A 87 . ? 4_546 ? 27 AC6 8 THR A 89 ? THR A 88 . ? 4_546 ? 28 AC6 8 ZN D . ? ZN A 116 . ? 1_555 ? 29 AC6 8 HOH H . ? HOH A 153 . ? 1_555 ? 30 AC6 8 HOH H . ? HOH A 226 . ? 1_555 ? 31 AC6 8 HOH H . ? HOH A 229 . ? 4_546 ? # _atom_sites.entry_id 3H50 _atom_sites.fract_transf_matrix[1][1] 0.020442 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.007747 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013883 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.032654 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O SE ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 0 GLY GLY A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 GLN 3 2 2 GLN GLN A . n A 1 4 TYR 4 3 3 TYR TYR A . n A 1 5 ALA 5 4 4 ALA ALA A . n A 1 6 THR 6 5 5 THR THR A . n A 1 7 LEU 7 6 6 LEU LEU A . n A 1 8 GLU 8 7 7 GLU GLU A . n A 1 9 LEU 9 8 8 LEU LEU A . n A 1 10 ASN 10 9 9 ASN ASN A . n A 1 11 ASN 11 10 10 ASN ASN A . n A 1 12 ALA 12 11 11 ALA ALA A . n A 1 13 PHE 13 12 12 PHE PHE A . n A 1 14 LYS 14 13 13 LYS LYS A . n A 1 15 VAL 15 14 14 VAL VAL A . n A 1 16 LEU 16 15 15 LEU LEU A . n A 1 17 PHE 17 16 16 PHE PHE A . n A 1 18 SER 18 17 17 SER SER A . n A 1 19 LEU 19 18 18 LEU LEU A . n A 1 20 ARG 20 19 19 ARG ARG A . n A 1 21 GLN 21 20 20 GLN GLN A . n A 1 22 VAL 22 21 21 VAL VAL A . n A 1 23 GLN 23 22 22 GLN GLN A . n A 1 24 ALA 24 23 23 ALA ALA A . n A 1 25 ALA 25 24 24 ALA ALA A . n A 1 26 GLU 26 25 25 GLU GLU A . n A 1 27 MSE 27 26 26 MSE MSE A . n A 1 28 VAL 28 27 27 VAL VAL A . n A 1 29 ILE 29 28 28 ILE ILE A . n A 1 30 ALA 30 29 29 ALA ALA A . n A 1 31 PRO 31 30 30 PRO PRO A . n A 1 32 GLY 32 31 31 GLY GLY A . n A 1 33 ASP 33 32 32 ASP ASP A . n A 1 34 ARG 34 33 33 ARG ARG A . n A 1 35 GLU 35 34 34 GLU GLU A . n A 1 36 GLY 36 35 35 GLY GLY A . n A 1 37 GLY 37 36 36 GLY GLY A . n A 1 38 PRO 38 37 37 PRO PRO A . n A 1 39 ASP 39 38 38 ASP ASP A . n A 1 40 ASN 40 39 39 ASN ASN A . n A 1 41 ARG 41 40 40 ARG ARG A . n A 1 42 HIS 42 41 41 HIS HIS A . n A 1 43 ARG 43 42 42 ARG ARG A . n A 1 44 GLY 44 43 43 GLY GLY A . n A 1 45 ALA 45 44 44 ALA ALA A . n A 1 46 ASP 46 45 45 ASP ASP A . n A 1 47 GLN 47 46 46 GLN GLN A . n A 1 48 TRP 48 47 47 TRP TRP A . n A 1 49 LEU 49 48 48 LEU LEU A . n A 1 50 PHE 50 49 49 PHE PHE A . n A 1 51 VAL 51 50 50 VAL VAL A . n A 1 52 VAL 52 51 51 VAL VAL A . n A 1 53 ASP 53 52 52 ASP ASP A . n A 1 54 GLY 54 53 53 GLY GLY A . n A 1 55 ALA 55 54 54 ALA ALA A . n A 1 56 GLY 56 55 55 GLY GLY A . n A 1 57 GLU 57 56 56 GLU GLU A . n A 1 58 ALA 58 57 57 ALA ALA A . n A 1 59 ILE 59 58 58 ILE ILE A . n A 1 60 VAL 60 59 59 VAL VAL A . n A 1 61 ASP 61 60 60 ASP ASP A . n A 1 62 GLY 62 61 61 GLY GLY A . n A 1 63 HIS 63 62 62 HIS HIS A . n A 1 64 THR 64 63 63 THR THR A . n A 1 65 GLN 65 64 64 GLN GLN A . n A 1 66 ALA 66 65 65 ALA ALA A . n A 1 67 LEU 67 66 66 LEU LEU A . n A 1 68 GLN 68 67 67 GLN GLN A . n A 1 69 ALA 69 68 68 ALA ALA A . n A 1 70 GLY 70 69 69 GLY GLY A . n A 1 71 SER 71 70 70 SER SER A . n A 1 72 LEU 72 71 71 LEU LEU A . n A 1 73 ILE 73 72 72 ILE ILE A . n A 1 74 ALA 74 73 73 ALA ALA A . n A 1 75 ILE 75 74 74 ILE ILE A . n A 1 76 GLU 76 75 75 GLU GLU A . n A 1 77 ARG 77 76 76 ARG ARG A . n A 1 78 GLY 78 77 77 GLY GLY A . n A 1 79 GLN 79 78 78 GLN GLN A . n A 1 80 ALA 80 79 79 ALA ALA A . n A 1 81 HIS 81 80 80 HIS HIS A . n A 1 82 GLU 82 81 81 GLU GLU A . n A 1 83 ILE 83 82 82 ILE ILE A . n A 1 84 ARG 84 83 83 ARG ARG A . n A 1 85 ASN 85 84 84 ASN ASN A . n A 1 86 THR 86 85 85 THR THR A . n A 1 87 GLY 87 86 86 GLY GLY A . n A 1 88 ASP 88 87 87 ASP ASP A . n A 1 89 THR 89 88 88 THR THR A . n A 1 90 PRO 90 89 89 PRO PRO A . n A 1 91 LEU 91 90 90 LEU LEU A . n A 1 92 LYS 92 91 91 LYS LYS A . n A 1 93 THR 93 92 92 THR THR A . n A 1 94 VAL 94 93 93 VAL VAL A . n A 1 95 ASN 95 94 94 ASN ASN A . n A 1 96 PHE 96 95 95 PHE PHE A . n A 1 97 TYR 97 96 96 TYR TYR A . n A 1 98 HIS 98 97 97 HIS HIS A . n A 1 99 PRO 99 98 98 PRO PRO A . n A 1 100 PRO 100 99 99 PRO PRO A . n A 1 101 ALA 101 100 100 ALA ALA A . n A 1 102 TYR 102 101 101 TYR TYR A . n A 1 103 ASP 103 102 102 ASP ASP A . n A 1 104 ALA 104 103 103 ALA ALA A . n A 1 105 GLN 105 104 104 GLN GLN A . n A 1 106 GLY 106 105 105 GLY GLY A . n A 1 107 GLU 107 106 106 GLU GLU A . n A 1 108 PRO 108 107 107 PRO PRO A . n A 1 109 LEU 109 108 108 LEU LEU A . n A 1 110 PRO 110 109 109 PRO PRO A . n A 1 111 ALA 111 110 110 ALA ALA A . n A 1 112 GLY 112 111 111 GLY GLY A . n A 1 113 GLU 113 112 112 GLU GLU A . n A 1 114 GLY 114 113 113 GLY GLY A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 114 1 ZN ZN A . C 2 ZN 1 115 2 ZN ZN A . D 2 ZN 1 116 3 ZN ZN A . E 2 ZN 1 117 4 ZN ZN A . F 3 ACT 1 118 5 ACT ACT A . G 3 ACT 1 119 6 ACT ACT A . H 4 HOH 1 120 120 HOH HOH A . H 4 HOH 2 121 121 HOH HOH A . H 4 HOH 3 122 122 HOH HOH A . H 4 HOH 4 123 123 HOH HOH A . H 4 HOH 5 124 124 HOH HOH A . H 4 HOH 6 125 125 HOH HOH A . H 4 HOH 7 126 126 HOH HOH A . H 4 HOH 8 127 127 HOH HOH A . H 4 HOH 9 128 128 HOH HOH A . H 4 HOH 10 129 129 HOH HOH A . H 4 HOH 11 130 130 HOH HOH A . H 4 HOH 12 131 131 HOH HOH A . H 4 HOH 13 132 132 HOH HOH A . H 4 HOH 14 133 133 HOH HOH A . H 4 HOH 15 134 134 HOH HOH A . H 4 HOH 16 135 135 HOH HOH A . H 4 HOH 17 136 136 HOH HOH A . H 4 HOH 18 137 137 HOH HOH A . H 4 HOH 19 138 138 HOH HOH A . H 4 HOH 20 139 139 HOH HOH A . H 4 HOH 21 140 140 HOH HOH A . H 4 HOH 22 141 141 HOH HOH A . H 4 HOH 23 142 142 HOH HOH A . H 4 HOH 24 143 143 HOH HOH A . H 4 HOH 25 144 144 HOH HOH A . H 4 HOH 26 145 145 HOH HOH A . H 4 HOH 27 146 146 HOH HOH A . H 4 HOH 28 147 147 HOH HOH A . H 4 HOH 29 148 148 HOH HOH A . H 4 HOH 30 149 149 HOH HOH A . H 4 HOH 31 150 150 HOH HOH A . H 4 HOH 32 151 151 HOH HOH A . H 4 HOH 33 152 152 HOH HOH A . H 4 HOH 34 153 153 HOH HOH A . H 4 HOH 35 154 154 HOH HOH A . H 4 HOH 36 155 155 HOH HOH A . H 4 HOH 37 156 156 HOH HOH A . H 4 HOH 38 157 157 HOH HOH A . H 4 HOH 39 158 158 HOH HOH A . H 4 HOH 40 159 7 HOH HOH A . H 4 HOH 41 160 8 HOH HOH A . H 4 HOH 42 161 9 HOH HOH A . H 4 HOH 43 162 10 HOH HOH A . H 4 HOH 44 163 11 HOH HOH A . H 4 HOH 45 164 12 HOH HOH A . H 4 HOH 46 165 13 HOH HOH A . H 4 HOH 47 166 14 HOH HOH A . H 4 HOH 48 167 15 HOH HOH A . H 4 HOH 49 168 16 HOH HOH A . H 4 HOH 50 169 17 HOH HOH A . H 4 HOH 51 170 18 HOH HOH A . H 4 HOH 52 171 19 HOH HOH A . H 4 HOH 53 172 20 HOH HOH A . H 4 HOH 54 173 21 HOH HOH A . H 4 HOH 55 174 22 HOH HOH A . H 4 HOH 56 175 23 HOH HOH A . H 4 HOH 57 176 24 HOH HOH A . H 4 HOH 58 177 25 HOH HOH A . H 4 HOH 59 178 26 HOH HOH A . H 4 HOH 60 179 27 HOH HOH A . H 4 HOH 61 180 28 HOH HOH A . H 4 HOH 62 181 29 HOH HOH A . H 4 HOH 63 182 30 HOH HOH A . H 4 HOH 64 183 31 HOH HOH A . H 4 HOH 65 184 32 HOH HOH A . H 4 HOH 66 185 33 HOH HOH A . H 4 HOH 67 186 34 HOH HOH A . H 4 HOH 68 187 35 HOH HOH A . H 4 HOH 69 188 36 HOH HOH A . H 4 HOH 70 189 37 HOH HOH A . H 4 HOH 71 190 38 HOH HOH A . H 4 HOH 72 191 39 HOH HOH A . H 4 HOH 73 192 40 HOH HOH A . H 4 HOH 74 193 41 HOH HOH A . H 4 HOH 75 194 42 HOH HOH A . H 4 HOH 76 195 43 HOH HOH A . H 4 HOH 77 196 44 HOH HOH A . H 4 HOH 78 197 45 HOH HOH A . H 4 HOH 79 198 46 HOH HOH A . H 4 HOH 80 199 47 HOH HOH A . H 4 HOH 81 200 48 HOH HOH A . H 4 HOH 82 201 49 HOH HOH A . H 4 HOH 83 202 50 HOH HOH A . H 4 HOH 84 203 51 HOH HOH A . H 4 HOH 85 204 52 HOH HOH A . H 4 HOH 86 205 53 HOH HOH A . H 4 HOH 87 206 54 HOH HOH A . H 4 HOH 88 207 55 HOH HOH A . H 4 HOH 89 208 56 HOH HOH A . H 4 HOH 90 209 57 HOH HOH A . H 4 HOH 91 210 58 HOH HOH A . H 4 HOH 92 211 59 HOH HOH A . H 4 HOH 93 212 60 HOH HOH A . H 4 HOH 94 213 61 HOH HOH A . H 4 HOH 95 214 62 HOH HOH A . H 4 HOH 96 215 63 HOH HOH A . H 4 HOH 97 216 64 HOH HOH A . H 4 HOH 98 217 65 HOH HOH A . H 4 HOH 99 218 66 HOH HOH A . H 4 HOH 100 219 67 HOH HOH A . H 4 HOH 101 220 68 HOH HOH A . H 4 HOH 102 221 69 HOH HOH A . H 4 HOH 103 222 70 HOH HOH A . H 4 HOH 104 223 71 HOH HOH A . H 4 HOH 105 224 72 HOH HOH A . H 4 HOH 106 225 73 HOH HOH A . H 4 HOH 107 226 74 HOH HOH A . H 4 HOH 108 227 75 HOH HOH A . H 4 HOH 109 228 76 HOH HOH A . H 4 HOH 110 229 77 HOH HOH A . H 4 HOH 111 230 78 HOH HOH A . H 4 HOH 112 231 79 HOH HOH A . H 4 HOH 113 232 80 HOH HOH A . H 4 HOH 114 233 81 HOH HOH A . H 4 HOH 115 234 82 HOH HOH A . H 4 HOH 116 235 83 HOH HOH A . H 4 HOH 117 236 84 HOH HOH A . H 4 HOH 118 237 85 HOH HOH A . H 4 HOH 119 238 86 HOH HOH A . H 4 HOH 120 239 87 HOH HOH A . H 4 HOH 121 240 88 HOH HOH A . H 4 HOH 122 241 89 HOH HOH A . H 4 HOH 123 242 90 HOH HOH A . H 4 HOH 124 243 91 HOH HOH A . H 4 HOH 125 244 92 HOH HOH A . H 4 HOH 126 245 93 HOH HOH A . H 4 HOH 127 246 94 HOH HOH A . H 4 HOH 128 247 95 HOH HOH A . H 4 HOH 129 248 96 HOH HOH A . H 4 HOH 130 249 97 HOH HOH A . H 4 HOH 131 250 98 HOH HOH A . H 4 HOH 132 251 99 HOH HOH A . H 4 HOH 133 252 100 HOH HOH A . H 4 HOH 134 253 101 HOH HOH A . H 4 HOH 135 254 102 HOH HOH A . H 4 HOH 136 255 103 HOH HOH A . H 4 HOH 137 256 104 HOH HOH A . H 4 HOH 138 257 105 HOH HOH A . H 4 HOH 139 258 106 HOH HOH A . H 4 HOH 140 259 107 HOH HOH A . H 4 HOH 141 260 108 HOH HOH A . H 4 HOH 142 261 109 HOH HOH A . H 4 HOH 143 262 110 HOH HOH A . H 4 HOH 144 263 111 HOH HOH A . H 4 HOH 145 264 112 HOH HOH A . H 4 HOH 146 265 113 HOH HOH A . H 4 HOH 147 266 114 HOH HOH A . H 4 HOH 148 267 115 HOH HOH A . H 4 HOH 149 268 116 HOH HOH A . H 4 HOH 150 269 117 HOH HOH A . H 4 HOH 151 270 118 HOH HOH A . H 4 HOH 152 271 119 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 27 A MSE 26 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5000 ? 1 MORE -281 ? 1 'SSA (A^2)' 9510 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1.0000000000 0.0000000000 0.0000000000 37.3116234931 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 30.6236525397 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 42 ? A HIS 41 ? 1_555 ZN ? B ZN . ? A ZN 114 ? 1_555 OE1 ? A GLN 47 ? A GLN 46 ? 1_555 94.7 ? 2 NE2 ? A HIS 42 ? A HIS 41 ? 1_555 ZN ? B ZN . ? A ZN 114 ? 1_555 NE2 ? A HIS 81 ? A HIS 80 ? 1_555 95.6 ? 3 OE1 ? A GLN 47 ? A GLN 46 ? 1_555 ZN ? B ZN . ? A ZN 114 ? 1_555 NE2 ? A HIS 81 ? A HIS 80 ? 1_555 95.4 ? 4 NE2 ? A HIS 42 ? A HIS 41 ? 1_555 ZN ? B ZN . ? A ZN 114 ? 1_555 O ? F ACT . ? A ACT 118 ? 1_555 110.1 ? 5 OE1 ? A GLN 47 ? A GLN 46 ? 1_555 ZN ? B ZN . ? A ZN 114 ? 1_555 O ? F ACT . ? A ACT 118 ? 1_555 153.5 ? 6 NE2 ? A HIS 81 ? A HIS 80 ? 1_555 ZN ? B ZN . ? A ZN 114 ? 1_555 O ? F ACT . ? A ACT 118 ? 1_555 91.7 ? 7 NE2 ? A HIS 42 ? A HIS 41 ? 1_555 ZN ? B ZN . ? A ZN 114 ? 1_555 OXT ? F ACT . ? A ACT 118 ? 1_555 166.0 ? 8 OE1 ? A GLN 47 ? A GLN 46 ? 1_555 ZN ? B ZN . ? A ZN 114 ? 1_555 OXT ? F ACT . ? A ACT 118 ? 1_555 96.3 ? 9 NE2 ? A HIS 81 ? A HIS 80 ? 1_555 ZN ? B ZN . ? A ZN 114 ? 1_555 OXT ? F ACT . ? A ACT 118 ? 1_555 92.1 ? 10 O ? F ACT . ? A ACT 118 ? 1_555 ZN ? B ZN . ? A ZN 114 ? 1_555 OXT ? F ACT . ? A ACT 118 ? 1_555 57.9 ? 11 NE2 ? A HIS 42 ? A HIS 41 ? 1_555 ZN ? B ZN . ? A ZN 114 ? 1_555 O ? H HOH . ? A HOH 181 ? 1_555 90.8 ? 12 OE1 ? A GLN 47 ? A GLN 46 ? 1_555 ZN ? B ZN . ? A ZN 114 ? 1_555 O ? H HOH . ? A HOH 181 ? 1_555 90.0 ? 13 NE2 ? A HIS 81 ? A HIS 80 ? 1_555 ZN ? B ZN . ? A ZN 114 ? 1_555 O ? H HOH . ? A HOH 181 ? 1_555 171.3 ? 14 O ? F ACT . ? A ACT 118 ? 1_555 ZN ? B ZN . ? A ZN 114 ? 1_555 O ? H HOH . ? A HOH 181 ? 1_555 80.5 ? 15 OXT ? F ACT . ? A ACT 118 ? 1_555 ZN ? B ZN . ? A ZN 114 ? 1_555 O ? H HOH . ? A HOH 181 ? 1_555 80.5 ? 16 OE2 ? A GLU 76 ? A GLU 75 ? 1_555 ZN ? D ZN . ? A ZN 116 ? 1_555 OXT ? G ACT . ? A ACT 119 ? 1_555 97.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-05-05 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' software 3 4 'Structure model' struct_conn 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_struct_conn_angle 6 5 'Structure model' struct_conn 7 5 'Structure model' struct_ref_seq_dif 8 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 20 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 21 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 22 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 23 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 24 5 'Structure model' '_pdbx_struct_conn_angle.value' 25 5 'Structure model' '_struct_conn.pdbx_dist_value' 26 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 27 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 28 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 29 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 30 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 31 5 'Structure model' '_struct_ref_seq_dif.details' 32 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 33 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 34 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 10.7660 _pdbx_refine_tls.origin_y 71.0120 _pdbx_refine_tls.origin_z 9.4190 _pdbx_refine_tls.T[1][1] 0.0396 _pdbx_refine_tls.T[2][2] -0.0062 _pdbx_refine_tls.T[3][3] 0.0071 _pdbx_refine_tls.T[1][2] -0.0009 _pdbx_refine_tls.T[1][3] 0.0054 _pdbx_refine_tls.T[2][3] 0.0000 _pdbx_refine_tls.L[1][1] 1.0010 _pdbx_refine_tls.L[2][2] 0.3212 _pdbx_refine_tls.L[3][3] 1.0830 _pdbx_refine_tls.L[1][2] -0.0224 _pdbx_refine_tls.L[1][3] 0.4056 _pdbx_refine_tls.L[2][3] 0.0472 _pdbx_refine_tls.S[1][1] 0.0391 _pdbx_refine_tls.S[2][2] 0.0128 _pdbx_refine_tls.S[3][3] -0.0519 _pdbx_refine_tls.S[1][2] 0.0046 _pdbx_refine_tls.S[1][3] -0.0466 _pdbx_refine_tls.S[2][3] 0.0287 _pdbx_refine_tls.S[2][1] -0.0083 _pdbx_refine_tls.S[3][1] -0.0030 _pdbx_refine_tls.S[3][2] -0.0346 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.beg_auth_seq_id 0 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 113 _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.selection ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0019 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 5 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? 7 SHELXD . ? ? ? ? phasing ? ? ? 8 autoSHARP . ? ? ? ? phasing ? ? ? 9 # _pdbx_entry_details.entry_id 3H50 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 9 ? ? -144.79 17.79 2 1 LEU A 15 ? ? -103.29 -146.68 3 1 PRO A 98 ? ? -63.23 -178.90 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 13 ? CE ? A LYS 14 CE 2 1 Y 1 A LYS 13 ? NZ ? A LYS 14 NZ 3 1 Y 1 A GLN 20 ? CD ? A GLN 21 CD 4 1 Y 1 A GLN 20 ? OE1 ? A GLN 21 OE1 5 1 Y 1 A GLN 20 ? NE2 ? A GLN 21 NE2 6 1 Y 1 A ARG 42 ? CZ ? A ARG 43 CZ 7 1 Y 1 A ARG 42 ? NH1 ? A ARG 43 NH1 8 1 Y 1 A ARG 42 ? NH2 ? A ARG 43 NH2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 'ACETATE ION' ACT 4 water HOH #