HEADER LYASE 22-APR-09 3H5J TITLE LEUD_1-168 SMALL SUBUNIT OF ISOPROPYLMALATE ISOMERASE (RV2987C) FROM TITLE 2 MYCOBACTERIUM TUBERCULOSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: LEUD, RESIDUES 1-168; COMPND 5 SYNONYM: ISOPROPYLMALATE ISOMERASE SMALL SUBUNIT, ALPHA-IPM COMPND 6 ISOMERASE, IPMI; COMPND 7 EC: 4.2.1.33; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 STRAIN: H37RV; SOURCE 5 GENE: RV2987C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PETM11 KEYWDS LEUCINE BIOSYNTHESIS, ISOPROPYLMALATE ISOMERASE, LEUD, KEYWDS 2 M.TUBERCULOSIS, AMINO-ACID BIOSYNTHESIS, BRANCHED-CHAIN AMINO ACID KEYWDS 3 BIOSYNTHESIS, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR K.MANIKANDAN,A.GEERLOF,M.S.WEISS REVDAT 4 01-NOV-23 3H5J 1 REMARK SEQADV REVDAT 3 08-DEC-10 3H5J 1 JRNL REVDAT 2 27-OCT-10 3H5J 1 JRNL REVDAT 1 07-APR-10 3H5J 0 JRNL AUTH K.MANIKANDAN,A.GEERLOF,A.V.ZOZULYA,D.I.SVERGUN,M.S.WEISS JRNL TITL STRUCTURAL STUDIES ON THE ENZYME COMPLEX ISOPROPYLMALATE JRNL TITL 2 ISOMERASE (LEUCD) FROM MYCOBACTERIUM TUBERCULOSIS JRNL REF PROTEINS V. 79 35 2011 JRNL REFN ISSN 0887-3585 JRNL PMID 20938981 JRNL DOI 10.1002/PROT.22856 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH K.MANIKANDAN,A.GEERLOF,L.SCHULDT,C.MUELLER-DIECKMANN, REMARK 1 AUTH 2 M.S.WEISS REMARK 1 TITL CLONING, EXPRESSION, PURIFICATION, CRYSTALLIZATION AND REMARK 1 TITL 2 PRELIMINARY X-RAY DIFFRACTION ANALYSIS OF THE SMALL SUBUNIT REMARK 1 TITL 3 OF ISOPROPYLMALATE ISOMERASE (RV2987C) FROM MYCOBACTERIUM REMARK 1 TITL 4 TUBERCULOSIS REMARK 1 REF ACTA CRYSTALLOGR.,SECT.F V. 65 136 2009 REMARK 1 REFN ESSN 1744-3091 REMARK 1 PMID 19194004 REMARK 1 DOI 10.1107/S1744309108042516 REMARK 2 REMARK 2 RESOLUTION. 1.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELXL-97 REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 13.42 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 CROSS-VALIDATION METHOD : FREE R REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.130 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.175 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 1855 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 88352 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : NULL REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : 0.127 REMARK 3 FREE R VALUE (F>4SIG(F)) : 0.170 REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : 1639 REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : 78497 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2595 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 33 REMARK 3 SOLVENT ATOMS : 413 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : 3024.5 REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : 2546.1 REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : 24 REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : 28335 REMARK 3 NUMBER OF RESTRAINTS : 35073 REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.013 REMARK 3 ANGLE DISTANCES (A) : 0.032 REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : 0.008 REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : 0.027 REMARK 3 ZERO CHIRAL VOLUMES (A**3) : 0.082 REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : 0.095 REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : 0.035 REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : 0.005 REMARK 3 SIMILAR ADP COMPONENTS (A**2) : 0.052 REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : 0.094 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: NULL REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : ENGH & HUBER REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3H5J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-APR-09. REMARK 100 THE DEPOSITION ID IS D_1000052718. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-OCT-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X12 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 90248 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.200 REMARK 200 RESOLUTION RANGE LOW (A) : 99.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.22 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.29600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3H5E REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M LITHIUM SULFATE, 0.1M TRIS-HCL PH REMARK 280 8.5, 20%(W/V) PEG 3350, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 37.85500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AS THE STRUCTURE REPRESENTS ONLY A PART OF A SUBUNIT OF AN REMARK 300 ENZYME COMPLEX, THE ASSEMBLIES DESCRIBED IN REMARK350 IS NOT REMARK 300 RELEVANT TO THE REAL BIOLOGICAL ASSEMBLIES REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 GLY B -1 REMARK 465 ALA B 0 REMARK 465 MET B 1 REMARK 465 SER B 1A REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 2 CG CD OE1 OE2 REMARK 480 GLU B 2 CG CD OE1 OE2 REMARK 480 SER B 75 CB OG REMARK 480 ASP B 168 CB CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER B 75 O HOH B 675 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 32 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG A 35 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 GLY A 37 N - CA - C ANGL. DEV. = 18.2 DEGREES REMARK 500 ASP A 40 CB - CG - OD2 ANGL. DEV. = -6.9 DEGREES REMARK 500 ARG A 61 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG A 90 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG A 96 CD - NE - CZ ANGL. DEV. = 11.5 DEGREES REMARK 500 ARG A 96 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG A 102 CD - NE - CZ ANGL. DEV. = 48.2 DEGREES REMARK 500 ARG A 102 NH1 - CZ - NH2 ANGL. DEV. = 7.5 DEGREES REMARK 500 ARG A 102 NE - CZ - NH1 ANGL. DEV. = -7.0 DEGREES REMARK 500 ARG A 102 NE - CZ - NH1 ANGL. DEV. = 6.2 DEGREES REMARK 500 ARG A 102 NE - CZ - NH2 ANGL. DEV. = -5.2 DEGREES REMARK 500 LEU A 122 CA - CB - CG ANGL. DEV. = 14.2 DEGREES REMARK 500 ARG A 142 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A 162 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 PHE B 4 CG - CD2 - CE2 ANGL. DEV. = 8.6 DEGREES REMARK 500 ARG B 15 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ARG B 16 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 THR B 21 CA - CB - CG2 ANGL. DEV. = -9.3 DEGREES REMARK 500 ARG B 35 NE - CZ - NH2 ANGL. DEV. = -4.9 DEGREES REMARK 500 ARG B 61 NE - CZ - NH1 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG B 61 NE - CZ - NH2 ANGL. DEV. = 3.2 DEGREES REMARK 500 GLY B 74 C - N - CA ANGL. DEV. = 21.8 DEGREES REMARK 500 ARG B 90 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG B 102 NE - CZ - NH1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG B 102 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 ASP B 118 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 GLU B 121 OE1 - CD - OE2 ANGL. DEV. = 9.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 147 -131.72 59.26 REMARK 500 ALA B 147 -124.63 55.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 2308 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3H5E RELATED DB: PDB REMARK 900 THE SAME PROTEIN, RESIDUES 1-156 REMARK 900 RELATED ID: 3H5H RELATED DB: PDB REMARK 900 THE SAME PROTEIN, RESIDUES 1-186 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SER 1A WAS INTRODUCED WHILE CLONING. DBREF 3H5J A 1 168 UNP P65277 LEUD_MYCTU 1 168 DBREF 3H5J B 1 168 UNP P65277 LEUD_MYCTU 1 168 SEQADV 3H5J GLY A -1 UNP P65277 EXPRESSION TAG SEQADV 3H5J ALA A 0 UNP P65277 EXPRESSION TAG SEQADV 3H5J SER A 1A UNP P65277 CLONING ARTIFACT SEQADV 3H5J GLY B -1 UNP P65277 EXPRESSION TAG SEQADV 3H5J ALA B 0 UNP P65277 EXPRESSION TAG SEQADV 3H5J SER B 1A UNP P65277 CLONING ARTIFACT SEQRES 1 A 171 GLY ALA MET SER GLU ALA PHE HIS THR HIS SER GLY ILE SEQRES 2 A 171 GLY VAL PRO LEU ARG ARG SER ASN VAL ASP THR ASP GLN SEQRES 3 A 171 ILE ILE PRO ALA VAL PHE LEU LYS ARG VAL THR ARG THR SEQRES 4 A 171 GLY PHE GLU ASP GLY LEU PHE ALA GLY TRP ARG SER ASP SEQRES 5 A 171 PRO ALA PHE VAL LEU ASN LEU SER PRO PHE ASP ARG GLY SEQRES 6 A 171 SER VAL LEU VAL ALA GLY PRO ASP PHE GLY THR GLY SER SEQRES 7 A 171 SER ARG GLU HIS ALA VAL TRP ALA LEU MET ASP TYR GLY SEQRES 8 A 171 PHE ARG VAL VAL ILE SER SER ARG PHE GLY ASP ILE PHE SEQRES 9 A 171 ARG GLY ASN ALA GLY LYS ALA GLY LEU LEU ALA ALA GLU SEQRES 10 A 171 VAL ALA GLN ASP ASP VAL GLU LEU LEU TRP LYS LEU ILE SEQRES 11 A 171 GLU GLN SER PRO GLY LEU GLU ILE THR ALA ASN LEU GLN SEQRES 12 A 171 ASP ARG ILE ILE THR ALA ALA THR VAL VAL LEU PRO PHE SEQRES 13 A 171 LYS ILE ASP ASP HIS SER ALA TRP ARG LEU LEU GLU GLY SEQRES 14 A 171 LEU ASP SEQRES 1 B 171 GLY ALA MET SER GLU ALA PHE HIS THR HIS SER GLY ILE SEQRES 2 B 171 GLY VAL PRO LEU ARG ARG SER ASN VAL ASP THR ASP GLN SEQRES 3 B 171 ILE ILE PRO ALA VAL PHE LEU LYS ARG VAL THR ARG THR SEQRES 4 B 171 GLY PHE GLU ASP GLY LEU PHE ALA GLY TRP ARG SER ASP SEQRES 5 B 171 PRO ALA PHE VAL LEU ASN LEU SER PRO PHE ASP ARG GLY SEQRES 6 B 171 SER VAL LEU VAL ALA GLY PRO ASP PHE GLY THR GLY SER SEQRES 7 B 171 SER ARG GLU HIS ALA VAL TRP ALA LEU MET ASP TYR GLY SEQRES 8 B 171 PHE ARG VAL VAL ILE SER SER ARG PHE GLY ASP ILE PHE SEQRES 9 B 171 ARG GLY ASN ALA GLY LYS ALA GLY LEU LEU ALA ALA GLU SEQRES 10 B 171 VAL ALA GLN ASP ASP VAL GLU LEU LEU TRP LYS LEU ILE SEQRES 11 B 171 GLU GLN SER PRO GLY LEU GLU ILE THR ALA ASN LEU GLN SEQRES 12 B 171 ASP ARG ILE ILE THR ALA ALA THR VAL VAL LEU PRO PHE SEQRES 13 B 171 LYS ILE ASP ASP HIS SER ALA TRP ARG LEU LEU GLU GLY SEQRES 14 B 171 LEU ASP HET EDO A1301 4 HET EDO A1302 4 HET EDO A1306 4 HET EDO A1307 4 HET EDO B2303 4 HET EDO B2304 4 HET EDO B2305 4 HET SO4 B2308 5 HETNAM EDO 1,2-ETHANEDIOL HETNAM SO4 SULFATE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO 7(C2 H6 O2) FORMUL 10 SO4 O4 S 2- FORMUL 11 HOH *413(H2 O) HELIX 1 1 ASP A 20 ILE A 25 1 6 HELIX 2 2 PRO A 26 LEU A 30 5 5 HELIX 3 3 PHE A 38 LEU A 42 5 5 HELIX 4 4 GLY A 45 ASP A 49 5 5 HELIX 5 5 PHE A 52 LEU A 56 5 5 HELIX 6 6 PRO A 58 GLY A 62 5 5 HELIX 7 7 ARG A 77 GLY A 88 1 12 HELIX 8 8 GLY A 98 ALA A 108 1 11 HELIX 9 9 ALA A 116 SER A 130 1 15 HELIX 10 10 ASP A 156 GLY A 166 1 11 HELIX 11 11 ASP B 20 ILE B 25 1 6 HELIX 12 12 PRO B 26 LEU B 30 5 5 HELIX 13 13 PHE B 38 LEU B 42 5 5 HELIX 14 14 GLY B 45 ASP B 49 5 5 HELIX 15 15 PHE B 52 LEU B 56 5 5 HELIX 16 16 PRO B 58 GLY B 62 5 5 HELIX 17 17 ARG B 77 GLY B 88 1 12 HELIX 18 18 GLY B 98 ALA B 108 1 11 HELIX 19 19 ALA B 116 SER B 130 1 15 HELIX 20 20 ASP B 156 GLY B 166 1 11 SHEET 1 A 7 LEU A 111 GLU A 114 0 SHEET 2 A 7 VAL A 91 SER A 94 1 N VAL A 92 O LEU A 111 SHEET 3 A 7 VAL A 64 ALA A 67 1 N LEU A 65 O ILE A 93 SHEET 4 A 7 THR A 6 LEU A 14 1 N VAL A 12 O VAL A 66 SHEET 5 A 7 GLU A 134 ASN A 138 -1 O ILE A 135 N GLY A 9 SHEET 6 A 7 ILE A 143 ALA A 146 -1 O ILE A 143 N ASN A 138 SHEET 7 A 7 VAL A 149 PRO A 152 -1 O LEU A 151 N ILE A 144 SHEET 1 B 7 LEU B 111 GLU B 114 0 SHEET 2 B 7 VAL B 91 SER B 94 1 N VAL B 92 O ALA B 113 SHEET 3 B 7 VAL B 64 ALA B 67 1 N LEU B 65 O ILE B 93 SHEET 4 B 7 THR B 6 LEU B 14 1 N LEU B 14 O VAL B 66 SHEET 5 B 7 GLU B 134 ASN B 138 -1 O ALA B 137 N HIS B 7 SHEET 6 B 7 ILE B 143 ALA B 146 -1 O ILE B 143 N ASN B 138 SHEET 7 B 7 VAL B 149 PRO B 152 -1 O LEU B 151 N ILE B 144 CISPEP 1 SER A 57 PRO A 58 0 -4.06 CISPEP 2 SER B 57 PRO B 58 0 3.88 SITE 1 AC1 10 GLU A 2 GLY A 106 LYS A 107 GLY A 109 SITE 2 AC1 10 ARG A 162 LEU A 163 GLY A 166 LEU A 167 SITE 3 AC1 10 HOH A 503 HOH A 505 SITE 1 AC2 5 VAL A 150 LEU A 151 PRO A 152 HOH A 421 SITE 2 AC2 5 HOH A 468 SITE 1 AC3 6 ARG A 16 ASP A 49 ALA A 51 PHE A 52 SITE 2 AC3 6 HOH A 351 HOH A 491 SITE 1 AC4 6 PHE A 29 ARG A 32 GLY A 37 PHE A 38 SITE 2 AC4 6 ASP A 40 GLY A 41 SITE 1 AC5 5 SER B 8 GLY B 9 GLU B 134 HOH B 530 SITE 2 AC5 5 HOH B 660 SITE 1 AC6 1 ARG B 15 SITE 1 AC7 4 ARG B 16 TRP B 46 HOH B 556 SO4 B2308 SITE 1 AC8 6 ASP B 49 ALA B 51 PHE B 52 HOH B 517 SITE 2 AC8 6 HOH B 674 EDO B2305 CRYST1 41.070 75.710 48.840 90.00 103.22 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024349 0.000000 0.005720 0.00000 SCALE2 0.000000 0.013208 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021032 0.00000