data_3H6D # _entry.id 3H6D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3H6D pdb_00003h6d 10.2210/pdb3h6d/pdb RCSB RCSB052748 ? ? WWPDB D_1000052748 ? ? # _pdbx_database_status.entry_id 3H6D _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-04-23 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Leveles, I.' 1 'Harmat, V.' 2 'Nagy, G.' 3 'Takacs, E.' 4 'Lopata, A.' 5 'Toth, J.' 6 'Vertessy, B.G.' 7 # _citation.id primary _citation.title ;Direct contacts between conserved motifs of different subunits provide major contribution to active site organization in human and mycobacterial dUTPases. ; _citation.journal_abbrev 'Febs Lett.' _citation.journal_volume 584 _citation.page_first 3047 _citation.page_last 3054 _citation.year 2010 _citation.journal_id_ASTM FEBLAL _citation.country NE _citation.journal_id_ISSN 0014-5793 _citation.journal_id_CSD 0165 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20493855 _citation.pdbx_database_id_DOI 10.1016/j.febslet.2010.05.018 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Takacs, E.' 1 ? primary 'Nagy, G.' 2 ? primary 'Leveles, I.' 3 ? primary 'Harmat, V.' 4 ? primary 'Lopata, A.' 5 ? primary 'Toth, J.' 6 ? primary 'Vertessy, B.G.' 7 ? # _cell.entry_id 3H6D _cell.length_a 55.228 _cell.length_b 55.228 _cell.length_c 83.650 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3H6D _symmetry.space_group_name_H-M 'P 63' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man ;Deoxyuridine 5'-triphosphate nucleotidohydrolase ; 17991.330 1 3.6.1.23 D28N ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 non-polymer syn ;2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE ; 467.157 1 ? ? ? ? 4 non-polymer syn 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 122.143 2 ? ? ? ? 5 water nat water 18.015 89 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'dUTPase, dUTP pyrophosphatase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGSSHHHHHHSSGLVPRGSHMSTTLAIVRLDPGLPLPSRAHDGDAGVNLYSAEDVELAPGRRALVRTGVAVAVPFGMVGL VHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTSR GDGGHGSSGGHASL ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGLVPRGSHMSTTLAIVRLDPGLPLPSRAHDGDAGVNLYSAEDVELAPGRRALVRTGVAVAVPFGMVGL VHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTSR GDGGHGSSGGHASL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 HIS n 1 21 MET n 1 22 SER n 1 23 THR n 1 24 THR n 1 25 LEU n 1 26 ALA n 1 27 ILE n 1 28 VAL n 1 29 ARG n 1 30 LEU n 1 31 ASP n 1 32 PRO n 1 33 GLY n 1 34 LEU n 1 35 PRO n 1 36 LEU n 1 37 PRO n 1 38 SER n 1 39 ARG n 1 40 ALA n 1 41 HIS n 1 42 ASP n 1 43 GLY n 1 44 ASP n 1 45 ALA n 1 46 GLY n 1 47 VAL n 1 48 ASN n 1 49 LEU n 1 50 TYR n 1 51 SER n 1 52 ALA n 1 53 GLU n 1 54 ASP n 1 55 VAL n 1 56 GLU n 1 57 LEU n 1 58 ALA n 1 59 PRO n 1 60 GLY n 1 61 ARG n 1 62 ARG n 1 63 ALA n 1 64 LEU n 1 65 VAL n 1 66 ARG n 1 67 THR n 1 68 GLY n 1 69 VAL n 1 70 ALA n 1 71 VAL n 1 72 ALA n 1 73 VAL n 1 74 PRO n 1 75 PHE n 1 76 GLY n 1 77 MET n 1 78 VAL n 1 79 GLY n 1 80 LEU n 1 81 VAL n 1 82 HIS n 1 83 PRO n 1 84 ARG n 1 85 SER n 1 86 GLY n 1 87 LEU n 1 88 ALA n 1 89 THR n 1 90 ARG n 1 91 VAL n 1 92 GLY n 1 93 LEU n 1 94 SER n 1 95 ILE n 1 96 VAL n 1 97 ASN n 1 98 SER n 1 99 PRO n 1 100 GLY n 1 101 THR n 1 102 ILE n 1 103 ASP n 1 104 ALA n 1 105 GLY n 1 106 TYR n 1 107 ARG n 1 108 GLY n 1 109 GLU n 1 110 ILE n 1 111 LYS n 1 112 VAL n 1 113 ALA n 1 114 LEU n 1 115 ILE n 1 116 ASN n 1 117 LEU n 1 118 ASP n 1 119 PRO n 1 120 ALA n 1 121 ALA n 1 122 PRO n 1 123 ILE n 1 124 VAL n 1 125 VAL n 1 126 HIS n 1 127 ARG n 1 128 GLY n 1 129 ASP n 1 130 ARG n 1 131 ILE n 1 132 ALA n 1 133 GLN n 1 134 LEU n 1 135 LEU n 1 136 VAL n 1 137 GLN n 1 138 ARG n 1 139 VAL n 1 140 GLU n 1 141 LEU n 1 142 VAL n 1 143 GLU n 1 144 LEU n 1 145 VAL n 1 146 GLU n 1 147 VAL n 1 148 SER n 1 149 SER n 1 150 PHE n 1 151 ASP n 1 152 GLU n 1 153 ALA n 1 154 GLY n 1 155 LEU n 1 156 ALA n 1 157 SER n 1 158 THR n 1 159 SER n 1 160 ARG n 1 161 GLY n 1 162 ASP n 1 163 GLY n 1 164 GLY n 1 165 HIS n 1 166 GLY n 1 167 SER n 1 168 SER n 1 169 GLY n 1 170 GLY n 1 171 HIS n 1 172 ALA n 1 173 SER n 1 174 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'dut, MT2771, MTCY05A6.18c, Rv2697c' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mycobacterium tuberculosis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1773 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DUT_MYCTU _struct_ref.pdbx_db_accession P0A552 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSTTLAIVRLDPGLPLPSRAHDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPG TIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTSRGDGGHGSSGGHASL ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3H6D _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 21 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 174 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P0A552 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 154 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 154 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3H6D MET A 1 ? UNP P0A552 ? ? 'expression tag' -19 1 1 3H6D GLY A 2 ? UNP P0A552 ? ? 'expression tag' -18 2 1 3H6D SER A 3 ? UNP P0A552 ? ? 'expression tag' -17 3 1 3H6D SER A 4 ? UNP P0A552 ? ? 'expression tag' -16 4 1 3H6D HIS A 5 ? UNP P0A552 ? ? 'expression tag' -15 5 1 3H6D HIS A 6 ? UNP P0A552 ? ? 'expression tag' -14 6 1 3H6D HIS A 7 ? UNP P0A552 ? ? 'expression tag' -13 7 1 3H6D HIS A 8 ? UNP P0A552 ? ? 'expression tag' -12 8 1 3H6D HIS A 9 ? UNP P0A552 ? ? 'expression tag' -11 9 1 3H6D HIS A 10 ? UNP P0A552 ? ? 'expression tag' -10 10 1 3H6D SER A 11 ? UNP P0A552 ? ? 'expression tag' -9 11 1 3H6D SER A 12 ? UNP P0A552 ? ? 'expression tag' -8 12 1 3H6D GLY A 13 ? UNP P0A552 ? ? 'expression tag' -7 13 1 3H6D LEU A 14 ? UNP P0A552 ? ? 'expression tag' -6 14 1 3H6D VAL A 15 ? UNP P0A552 ? ? 'expression tag' -5 15 1 3H6D PRO A 16 ? UNP P0A552 ? ? 'expression tag' -4 16 1 3H6D ARG A 17 ? UNP P0A552 ? ? 'expression tag' -3 17 1 3H6D GLY A 18 ? UNP P0A552 ? ? 'expression tag' -2 18 1 3H6D SER A 19 ? UNP P0A552 ? ? 'expression tag' -1 19 1 3H6D HIS A 20 ? UNP P0A552 ? ? 'expression tag' 0 20 1 3H6D ASN A 48 ? UNP P0A552 ASP 28 'engineered mutation' 28 21 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DUP non-polymer . ;2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE ; ? 'C9 H16 N3 O13 P3' 467.157 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRS non-polymer . 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 'TRIS BUFFER' 'C4 H12 N O3 1' 122.143 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3H6D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.05 _exptl_crystal.density_percent_sol 39.91 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '1.45 M Ammonium sulphate, 50 mM Tris, 12% Glycerol, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2008-12-12 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'DOUBLE CRYSTAL SI[111]' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97861 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'EMBL/DESY, HAMBURG BEAMLINE X12' _diffrn_source.pdbx_synchrotron_site 'EMBL/DESY, HAMBURG' _diffrn_source.pdbx_synchrotron_beamline X12 _diffrn_source.pdbx_wavelength 0.97861 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3H6D _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.000 _reflns.d_resolution_high 1.800 _reflns.number_obs 13348 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.06900 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 14.5800 _reflns.B_iso_Wilson_estimate 26.12 _reflns.pdbx_redundancy 3.390 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.85 _reflns_shell.percent_possible_all 99.2 _reflns_shell.Rmerge_I_obs 0.47100 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.410 _reflns_shell.pdbx_redundancy 2.54 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3H6D _refine.ls_number_reflns_obs 12638 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.16 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs 99.14 _refine.ls_R_factor_obs 0.16020 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.15765 _refine.ls_R_factor_R_free 0.20733 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.2 _refine.ls_number_reflns_R_free 688 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 0.33 _refine.occupancy_max 1.00 _refine.correlation_coeff_Fo_to_Fc 0.966 _refine.correlation_coeff_Fo_to_Fc_free 0.941 _refine.B_iso_mean 16.224 _refine.aniso_B[1][1] 0.72 _refine.aniso_B[2][2] 0.72 _refine.aniso_B[3][3] -1.09 _refine.aniso_B[1][2] 0.36 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. ARG 140 WAS ASSIGNED TO ELECTRON DENSITY BASED ON STRUCTURAL ALIGNMENT TO THE NATIVE ENZYME. ; _refine.pdbx_starting_model 'PDB ENTRY 2PY4' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model Isotropic _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.114 _refine.pdbx_overall_ESU_R_Free 0.118 _refine.overall_SU_ML 0.077 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 5.508 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1046 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 45 _refine_hist.number_atoms_solvent 89 _refine_hist.number_atoms_total 1180 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 19.16 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.015 0.022 ? 1132 'X-RAY DIFFRACTION' ? r_bond_other_d 0.000 0.020 ? 1100 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.741 2.031 ? 1555 'X-RAY DIFFRACTION' ? r_angle_other_deg 2.592 3.000 ? 2523 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.294 5.000 ? 151 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 33.503 21.500 ? 40 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.635 15.000 ? 166 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17.386 15.000 ? 13 'X-RAY DIFFRACTION' ? r_chiral_restr 0.091 0.200 ? 186 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.009 0.021 ? 1248 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 221 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.160 0.200 ? 59 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.141 0.200 ? 26 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.280 0.200 ? 89 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.197 0.200 ? 25 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.138 1.500 ? 734 'X-RAY DIFFRACTION' ? r_mcbond_other 0.410 1.500 ? 299 'X-RAY DIFFRACTION' ? r_mcangle_it 1.866 2.000 ? 1183 'X-RAY DIFFRACTION' ? r_scbond_it 3.097 3.000 ? 398 'X-RAY DIFFRACTION' ? r_scangle_it 4.979 4.500 ? 368 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.800 _refine_ls_shell.d_res_low 1.846 _refine_ls_shell.number_reflns_R_work 930 _refine_ls_shell.R_factor_R_work 0.229 _refine_ls_shell.percent_reflns_obs 99.19 _refine_ls_shell.R_factor_R_free 0.248 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 54 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3H6D _struct.title 'Structure of the mycobacterium tuberculosis DUTPase D28N mutant' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3H6D _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'jelly-roll, Hydrolase, Nucleotide metabolism' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 16 ? HIS A 20 ? PRO A -4 HIS A 0 5 ? 5 HELX_P HELX_P2 2 ARG A 84 ? GLY A 92 ? ARG A 64 GLY A 72 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? B MG . MG ? ? ? 1_555 C DUP . O1B ? ? A MG 200 A DUP 201 1_555 ? ? ? ? ? ? ? 2.330 ? ? metalc2 metalc ? ? B MG . MG ? ? ? 1_555 C DUP . O1A ? ? A MG 200 A DUP 201 1_555 ? ? ? ? ? ? ? 2.018 ? ? metalc3 metalc ? ? B MG . MG ? ? ? 1_555 C DUP . O2G ? ? A MG 200 A DUP 201 1_555 ? ? ? ? ? ? ? 2.130 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 98 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 78 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 99 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 79 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -3.39 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 26 ? ARG A 29 ? ALA A 6 ARG A 9 A 2 ARG A 62 ? ALA A 72 ? ARG A 42 ALA A 52 A 3 GLU A 109 ? ASN A 116 ? GLU A 89 ASN A 96 A 4 LEU A 93 ? ILE A 95 ? LEU A 73 ILE A 75 B 1 VAL A 47 ? TYR A 50 ? VAL A 27 TYR A 30 B 2 ARG A 130 ? ARG A 138 ? ARG A 110 ARG A 118 B 3 MET A 77 ? HIS A 82 ? MET A 57 HIS A 62 B 4 GLY A 100 ? ASP A 103 ? GLY A 80 ASP A 83 C 1 VAL A 55 ? LEU A 57 ? VAL A 35 LEU A 37 C 2 ILE A 123 ? VAL A 125 ? ILE A 103 VAL A 105 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 28 ? N VAL A 8 O ALA A 70 ? O ALA A 50 A 2 3 N VAL A 69 ? N VAL A 49 O ILE A 110 ? O ILE A 90 A 3 4 O ILE A 115 ? O ILE A 95 N SER A 94 ? N SER A 74 B 1 2 N VAL A 47 ? N VAL A 27 O LEU A 134 ? O LEU A 114 B 2 3 O GLN A 137 ? O GLN A 117 N VAL A 78 ? N VAL A 58 B 3 4 N GLY A 79 ? N GLY A 59 O ILE A 102 ? O ILE A 82 C 1 2 N VAL A 55 ? N VAL A 35 O VAL A 125 ? O VAL A 105 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 200 ? 1 'BINDING SITE FOR RESIDUE MG A 200' AC2 Software A DUP 201 ? 20 'BINDING SITE FOR RESIDUE DUP A 201' AC3 Software A TRS 202 ? 13 'BINDING SITE FOR RESIDUE TRS A 202' AC4 Software A TRS 203 ? 9 'BINDING SITE FOR RESIDUE TRS A 203' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 1 DUP C . ? DUP A 201 . ? 1_555 ? 2 AC2 20 ARG A 84 ? ARG A 64 . ? 2_545 ? 3 AC2 20 SER A 85 ? SER A 65 . ? 2_545 ? 4 AC2 20 GLY A 86 ? GLY A 66 . ? 2_545 ? 5 AC2 20 ASN A 97 ? ASN A 77 . ? 1_555 ? 6 AC2 20 GLY A 100 ? GLY A 80 . ? 1_555 ? 7 AC2 20 THR A 101 ? THR A 81 . ? 1_555 ? 8 AC2 20 ILE A 102 ? ILE A 82 . ? 1_555 ? 9 AC2 20 ASP A 103 ? ASP A 83 . ? 1_555 ? 10 AC2 20 TYR A 106 ? TYR A 86 . ? 1_555 ? 11 AC2 20 GLU A 109 ? GLU A 89 . ? 1_555 ? 12 AC2 20 ILE A 110 ? ILE A 90 . ? 1_555 ? 13 AC2 20 LYS A 111 ? LYS A 91 . ? 1_555 ? 14 AC2 20 GLN A 133 ? GLN A 113 . ? 2_545 ? 15 AC2 20 ARG A 160 ? ARG A 140 . ? 3_655 ? 16 AC2 20 HOH F . ? HOH A 188 . ? 1_555 ? 17 AC2 20 MG B . ? MG A 200 . ? 1_555 ? 18 AC2 20 HOH F . ? HOH A 212 . ? 1_555 ? 19 AC2 20 HOH F . ? HOH A 219 . ? 1_555 ? 20 AC2 20 HOH F . ? HOH A 222 . ? 1_555 ? 21 AC2 20 HOH F . ? HOH A 245 . ? 1_555 ? 22 AC3 13 SER A 94 ? SER A 74 . ? 2_545 ? 23 AC3 13 SER A 94 ? SER A 74 . ? 1_555 ? 24 AC3 13 SER A 94 ? SER A 74 . ? 3_655 ? 25 AC3 13 ILE A 95 ? ILE A 75 . ? 2_545 ? 26 AC3 13 ILE A 95 ? ILE A 75 . ? 1_555 ? 27 AC3 13 ILE A 95 ? ILE A 75 . ? 3_655 ? 28 AC3 13 VAL A 96 ? VAL A 76 . ? 2_545 ? 29 AC3 13 VAL A 96 ? VAL A 76 . ? 1_555 ? 30 AC3 13 VAL A 96 ? VAL A 76 . ? 3_655 ? 31 AC3 13 LEU A 117 ? LEU A 97 . ? 3_655 ? 32 AC3 13 HOH F . ? HOH A 194 . ? 3_655 ? 33 AC3 13 HOH F . ? HOH A 194 . ? 1_555 ? 34 AC3 13 HOH F . ? HOH A 194 . ? 2_545 ? 35 AC4 9 ARG A 29 ? ARG A 9 . ? 2_655 ? 36 AC4 9 ARG A 29 ? ARG A 9 . ? 3_665 ? 37 AC4 9 ARG A 29 ? ARG A 9 . ? 1_555 ? 38 AC4 9 PRO A 32 ? PRO A 12 . ? 1_555 ? 39 AC4 9 PRO A 32 ? PRO A 12 . ? 3_665 ? 40 AC4 9 PRO A 32 ? PRO A 12 . ? 2_655 ? 41 AC4 9 HOH F . ? HOH A 208 . ? 3_665 ? 42 AC4 9 HOH F . ? HOH A 208 . ? 1_555 ? 43 AC4 9 HOH F . ? HOH A 208 . ? 2_655 ? # _atom_sites.entry_id 3H6D _atom_sites.fract_transf_matrix[1][1] 0.018107 _atom_sites.fract_transf_matrix[1][2] 0.010454 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020908 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011955 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -19 ? ? ? A . n A 1 2 GLY 2 -18 ? ? ? A . n A 1 3 SER 3 -17 ? ? ? A . n A 1 4 SER 4 -16 ? ? ? A . n A 1 5 HIS 5 -15 ? ? ? A . n A 1 6 HIS 6 -14 ? ? ? A . n A 1 7 HIS 7 -13 ? ? ? A . n A 1 8 HIS 8 -12 ? ? ? A . n A 1 9 HIS 9 -11 ? ? ? A . n A 1 10 HIS 10 -10 -10 HIS HIS A . n A 1 11 SER 11 -9 -9 SER SER A . n A 1 12 SER 12 -8 -8 SER SER A . n A 1 13 GLY 13 -7 -7 GLY GLY A . n A 1 14 LEU 14 -6 -6 LEU LEU A . n A 1 15 VAL 15 -5 -5 VAL VAL A . n A 1 16 PRO 16 -4 -4 PRO PRO A . n A 1 17 ARG 17 -3 -3 ARG ARG A . n A 1 18 GLY 18 -2 -2 GLY GLY A . n A 1 19 SER 19 -1 -1 SER SER A . n A 1 20 HIS 20 0 0 HIS HIS A . n A 1 21 MET 21 1 1 MET MET A . n A 1 22 SER 22 2 2 SER SER A . n A 1 23 THR 23 3 3 THR THR A . n A 1 24 THR 24 4 4 THR THR A . n A 1 25 LEU 25 5 5 LEU LEU A . n A 1 26 ALA 26 6 6 ALA ALA A . n A 1 27 ILE 27 7 7 ILE ILE A . n A 1 28 VAL 28 8 8 VAL VAL A . n A 1 29 ARG 29 9 9 ARG ARG A . n A 1 30 LEU 30 10 10 LEU LEU A . n A 1 31 ASP 31 11 11 ASP ASP A . n A 1 32 PRO 32 12 12 PRO PRO A . n A 1 33 GLY 33 13 13 GLY GLY A . n A 1 34 LEU 34 14 14 LEU LEU A . n A 1 35 PRO 35 15 15 PRO PRO A . n A 1 36 LEU 36 16 16 LEU LEU A . n A 1 37 PRO 37 17 17 PRO PRO A . n A 1 38 SER 38 18 18 SER SER A . n A 1 39 ARG 39 19 19 ARG ARG A . n A 1 40 ALA 40 20 20 ALA ALA A . n A 1 41 HIS 41 21 21 HIS HIS A . n A 1 42 ASP 42 22 22 ASP ASP A . n A 1 43 GLY 43 23 23 GLY GLY A . n A 1 44 ASP 44 24 24 ASP ASP A . n A 1 45 ALA 45 25 25 ALA ALA A . n A 1 46 GLY 46 26 26 GLY GLY A . n A 1 47 VAL 47 27 27 VAL VAL A . n A 1 48 ASN 48 28 28 ASN ASN A . n A 1 49 LEU 49 29 29 LEU LEU A . n A 1 50 TYR 50 30 30 TYR TYR A . n A 1 51 SER 51 31 31 SER SER A . n A 1 52 ALA 52 32 32 ALA ALA A . n A 1 53 GLU 53 33 33 GLU GLU A . n A 1 54 ASP 54 34 34 ASP ASP A . n A 1 55 VAL 55 35 35 VAL VAL A . n A 1 56 GLU 56 36 36 GLU GLU A . n A 1 57 LEU 57 37 37 LEU LEU A . n A 1 58 ALA 58 38 38 ALA ALA A . n A 1 59 PRO 59 39 39 PRO PRO A . n A 1 60 GLY 60 40 40 GLY GLY A . n A 1 61 ARG 61 41 41 ARG ARG A . n A 1 62 ARG 62 42 42 ARG ARG A . n A 1 63 ALA 63 43 43 ALA ALA A . n A 1 64 LEU 64 44 44 LEU LEU A . n A 1 65 VAL 65 45 45 VAL VAL A . n A 1 66 ARG 66 46 46 ARG ARG A . n A 1 67 THR 67 47 47 THR THR A . n A 1 68 GLY 68 48 48 GLY GLY A . n A 1 69 VAL 69 49 49 VAL VAL A . n A 1 70 ALA 70 50 50 ALA ALA A . n A 1 71 VAL 71 51 51 VAL VAL A . n A 1 72 ALA 72 52 52 ALA ALA A . n A 1 73 VAL 73 53 53 VAL VAL A . n A 1 74 PRO 74 54 54 PRO PRO A . n A 1 75 PHE 75 55 55 PHE PHE A . n A 1 76 GLY 76 56 56 GLY GLY A . n A 1 77 MET 77 57 57 MET MET A . n A 1 78 VAL 78 58 58 VAL VAL A . n A 1 79 GLY 79 59 59 GLY GLY A . n A 1 80 LEU 80 60 60 LEU LEU A . n A 1 81 VAL 81 61 61 VAL VAL A . n A 1 82 HIS 82 62 62 HIS HIS A . n A 1 83 PRO 83 63 63 PRO PRO A . n A 1 84 ARG 84 64 64 ARG ARG A . n A 1 85 SER 85 65 65 SER SER A . n A 1 86 GLY 86 66 66 GLY GLY A . n A 1 87 LEU 87 67 67 LEU LEU A . n A 1 88 ALA 88 68 68 ALA ALA A . n A 1 89 THR 89 69 69 THR THR A . n A 1 90 ARG 90 70 70 ARG ARG A . n A 1 91 VAL 91 71 71 VAL VAL A . n A 1 92 GLY 92 72 72 GLY GLY A . n A 1 93 LEU 93 73 73 LEU LEU A . n A 1 94 SER 94 74 74 SER SER A . n A 1 95 ILE 95 75 75 ILE ILE A . n A 1 96 VAL 96 76 76 VAL VAL A . n A 1 97 ASN 97 77 77 ASN ASN A . n A 1 98 SER 98 78 78 SER SER A . n A 1 99 PRO 99 79 79 PRO PRO A . n A 1 100 GLY 100 80 80 GLY GLY A . n A 1 101 THR 101 81 81 THR THR A . n A 1 102 ILE 102 82 82 ILE ILE A . n A 1 103 ASP 103 83 83 ASP ASP A . n A 1 104 ALA 104 84 84 ALA ALA A . n A 1 105 GLY 105 85 85 GLY GLY A . n A 1 106 TYR 106 86 86 TYR TYR A . n A 1 107 ARG 107 87 87 ARG ARG A . n A 1 108 GLY 108 88 88 GLY GLY A . n A 1 109 GLU 109 89 89 GLU GLU A . n A 1 110 ILE 110 90 90 ILE ILE A . n A 1 111 LYS 111 91 91 LYS LYS A . n A 1 112 VAL 112 92 92 VAL VAL A . n A 1 113 ALA 113 93 93 ALA ALA A . n A 1 114 LEU 114 94 94 LEU LEU A . n A 1 115 ILE 115 95 95 ILE ILE A . n A 1 116 ASN 116 96 96 ASN ASN A . n A 1 117 LEU 117 97 97 LEU LEU A . n A 1 118 ASP 118 98 98 ASP ASP A . n A 1 119 PRO 119 99 99 PRO PRO A . n A 1 120 ALA 120 100 100 ALA ALA A . n A 1 121 ALA 121 101 101 ALA ALA A . n A 1 122 PRO 122 102 102 PRO PRO A . n A 1 123 ILE 123 103 103 ILE ILE A . n A 1 124 VAL 124 104 104 VAL VAL A . n A 1 125 VAL 125 105 105 VAL VAL A . n A 1 126 HIS 126 106 106 HIS HIS A . n A 1 127 ARG 127 107 107 ARG ARG A . n A 1 128 GLY 128 108 108 GLY GLY A . n A 1 129 ASP 129 109 109 ASP ASP A . n A 1 130 ARG 130 110 110 ARG ARG A . n A 1 131 ILE 131 111 111 ILE ILE A . n A 1 132 ALA 132 112 112 ALA ALA A . n A 1 133 GLN 133 113 113 GLN GLN A . n A 1 134 LEU 134 114 114 LEU LEU A . n A 1 135 LEU 135 115 115 LEU LEU A . n A 1 136 VAL 136 116 116 VAL VAL A . n A 1 137 GLN 137 117 117 GLN GLN A . n A 1 138 ARG 138 118 118 ARG ARG A . n A 1 139 VAL 139 119 119 VAL VAL A . n A 1 140 GLU 140 120 120 GLU GLU A . n A 1 141 LEU 141 121 121 LEU LEU A . n A 1 142 VAL 142 122 122 VAL VAL A . n A 1 143 GLU 143 123 123 GLU GLU A . n A 1 144 LEU 144 124 124 LEU LEU A . n A 1 145 VAL 145 125 125 VAL VAL A . n A 1 146 GLU 146 126 126 GLU GLU A . n A 1 147 VAL 147 127 127 VAL VAL A . n A 1 148 SER 148 128 128 SER SER A . n A 1 149 SER 149 129 129 SER SER A . n A 1 150 PHE 150 130 130 PHE PHE A . n A 1 151 ASP 151 131 131 ASP ASP A . n A 1 152 GLU 152 132 132 GLU GLU A . n A 1 153 ALA 153 133 133 ALA ALA A . n A 1 154 GLY 154 134 ? ? ? A . n A 1 155 LEU 155 135 ? ? ? A . n A 1 156 ALA 156 136 ? ? ? A . n A 1 157 SER 157 137 ? ? ? A . n A 1 158 THR 158 138 ? ? ? A . n A 1 159 SER 159 139 ? ? ? A . n A 1 160 ARG 160 140 140 ARG ARG A . n A 1 161 GLY 161 141 ? ? ? A . n A 1 162 ASP 162 142 ? ? ? A . n A 1 163 GLY 163 143 ? ? ? A . n A 1 164 GLY 164 144 ? ? ? A . n A 1 165 HIS 165 145 ? ? ? A . n A 1 166 GLY 166 146 ? ? ? A . n A 1 167 SER 167 147 ? ? ? A . n A 1 168 SER 168 148 ? ? ? A . n A 1 169 GLY 169 149 ? ? ? A . n A 1 170 GLY 170 150 ? ? ? A . n A 1 171 HIS 171 151 ? ? ? A . n A 1 172 ALA 172 152 ? ? ? A . n A 1 173 SER 173 153 ? ? ? A . n A 1 174 LEU 174 154 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 200 200 MG MG A . C 3 DUP 1 201 201 DUP DUP A . D 4 TRS 1 202 202 TRS TRS A . E 4 TRS 1 203 203 TRS TRS A . F 5 HOH 1 175 175 HOH HOH A . F 5 HOH 2 176 176 HOH HOH A . F 5 HOH 3 177 177 HOH HOH A . F 5 HOH 4 178 178 HOH HOH A . F 5 HOH 5 179 179 HOH HOH A . F 5 HOH 6 180 180 HOH HOH A . F 5 HOH 7 181 181 HOH HOH A . F 5 HOH 8 182 182 HOH HOH A . F 5 HOH 9 183 183 HOH HOH A . F 5 HOH 10 184 184 HOH HOH A . F 5 HOH 11 185 185 HOH HOH A . F 5 HOH 12 186 186 HOH HOH A . F 5 HOH 13 187 187 HOH HOH A . F 5 HOH 14 188 188 HOH HOH A . F 5 HOH 15 189 189 HOH HOH A . F 5 HOH 16 190 190 HOH HOH A . F 5 HOH 17 191 191 HOH HOH A . F 5 HOH 18 192 192 HOH HOH A . F 5 HOH 19 193 193 HOH HOH A . F 5 HOH 20 194 194 HOH HOH A . F 5 HOH 21 195 195 HOH HOH A . F 5 HOH 22 196 196 HOH HOH A . F 5 HOH 23 197 197 HOH HOH A . F 5 HOH 24 198 198 HOH HOH A . F 5 HOH 25 199 199 HOH HOH A . F 5 HOH 26 204 204 HOH HOH A . F 5 HOH 27 205 205 HOH HOH A . F 5 HOH 28 206 206 HOH HOH A . F 5 HOH 29 207 207 HOH HOH A . F 5 HOH 30 208 208 HOH HOH A . F 5 HOH 31 209 209 HOH HOH A . F 5 HOH 32 210 210 HOH HOH A . F 5 HOH 33 211 211 HOH HOH A . F 5 HOH 34 212 212 HOH HOH A . F 5 HOH 35 213 213 HOH HOH A . F 5 HOH 36 214 214 HOH HOH A . F 5 HOH 37 215 215 HOH HOH A . F 5 HOH 38 216 216 HOH HOH A . F 5 HOH 39 217 217 HOH HOH A . F 5 HOH 40 218 218 HOH HOH A . F 5 HOH 41 219 219 HOH HOH A . F 5 HOH 42 220 220 HOH HOH A . F 5 HOH 43 221 221 HOH HOH A . F 5 HOH 44 222 222 HOH HOH A . F 5 HOH 45 223 223 HOH HOH A . F 5 HOH 46 224 224 HOH HOH A . F 5 HOH 47 225 225 HOH HOH A . F 5 HOH 48 226 226 HOH HOH A . F 5 HOH 49 227 227 HOH HOH A . F 5 HOH 50 228 228 HOH HOH A . F 5 HOH 51 229 229 HOH HOH A . F 5 HOH 52 230 230 HOH HOH A . F 5 HOH 53 231 231 HOH HOH A . F 5 HOH 54 232 232 HOH HOH A . F 5 HOH 55 233 233 HOH HOH A . F 5 HOH 56 234 234 HOH HOH A . F 5 HOH 57 235 235 HOH HOH A . F 5 HOH 58 236 236 HOH HOH A . F 5 HOH 59 237 237 HOH HOH A . F 5 HOH 60 238 238 HOH HOH A . F 5 HOH 61 239 239 HOH HOH A . F 5 HOH 62 240 240 HOH HOH A . F 5 HOH 63 241 241 HOH HOH A . F 5 HOH 64 242 242 HOH HOH A . F 5 HOH 65 243 243 HOH HOH A . F 5 HOH 66 244 244 HOH HOH A . F 5 HOH 67 245 245 HOH HOH A . F 5 HOH 68 246 246 HOH HOH A . F 5 HOH 69 247 247 HOH HOH A . F 5 HOH 70 248 248 HOH HOH A . F 5 HOH 71 250 250 HOH HOH A . F 5 HOH 72 251 251 HOH HOH A . F 5 HOH 73 252 252 HOH HOH A . F 5 HOH 74 253 253 HOH HOH A . F 5 HOH 75 254 254 HOH HOH A . F 5 HOH 76 255 255 HOH HOH A . F 5 HOH 77 257 257 HOH HOH A . F 5 HOH 78 258 258 HOH HOH A . F 5 HOH 79 259 259 HOH HOH A . F 5 HOH 80 260 260 HOH HOH A . F 5 HOH 81 261 261 HOH HOH A . F 5 HOH 82 262 262 HOH HOH A . F 5 HOH 83 263 263 HOH HOH A . F 5 HOH 84 264 264 HOH HOH A . F 5 HOH 85 265 265 HOH HOH A . F 5 HOH 86 266 266 HOH HOH A . F 5 HOH 87 267 267 HOH HOH A . F 5 HOH 88 268 268 HOH HOH A . F 5 HOH 89 269 269 HOH HOH A . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? trimeric 3 2 software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2,3 A,B,C,D,E,F 2 1 A,B,C,D,E,F # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_545 -y,x-y-1,z -0.5000000000 -0.8660254038 0.0000000000 27.6140000000 0.8660254038 -0.5000000000 0.0000000000 -47.8288510002 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_655 -x+y+1,-x,z -0.5000000000 0.8660254038 0.0000000000 55.2280000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A TRS 203 ? E TRS . 2 1 A TRS 203 ? E TRS . 3 1 A HOH 193 ? F HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O1B ? C DUP . ? A DUP 201 ? 1_555 MG ? B MG . ? A MG 200 ? 1_555 O1A ? C DUP . ? A DUP 201 ? 1_555 88.6 ? 2 O1B ? C DUP . ? A DUP 201 ? 1_555 MG ? B MG . ? A MG 200 ? 1_555 O2G ? C DUP . ? A DUP 201 ? 1_555 84.5 ? 3 O1A ? C DUP . ? A DUP 201 ? 1_555 MG ? B MG . ? A MG 200 ? 1_555 O2G ? C DUP . ? A DUP 201 ? 1_555 90.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-11-24 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2021-10-13 4 'Structure model' 1 3 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Refinement description' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' diffrn_source 3 3 'Structure model' pdbx_struct_special_symmetry 4 3 'Structure model' struct_ref_seq_dif 5 3 'Structure model' struct_site 6 4 'Structure model' chem_comp_atom 7 4 'Structure model' chem_comp_bond 8 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 4 3 'Structure model' '_struct_ref_seq_dif.details' 5 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 36.2134 1.2947 -26.2716 0.0738 0.0647 0.1280 0.0445 -0.0469 0.0216 1.8935 11.6960 4.8974 2.9882 -2.8256 -2.4762 -0.1145 -0.0584 0.1729 -0.1331 -0.2302 -0.5941 0.1738 0.3228 0.2271 'X-RAY DIFFRACTION' 2 ? refined 27.1358 -2.7374 -0.1098 0.0214 0.0092 0.0237 -0.0064 -0.0054 0.0011 0.4063 0.5944 0.2382 -0.1642 -0.0019 -0.2489 -0.0249 0.0083 0.0165 -0.0085 0.0706 -0.0252 0.0306 -0.0412 0.0289 'X-RAY DIFFRACTION' 3 ? refined 12.9889 -28.0427 -14.8399 0.0748 0.0806 0.0309 -0.0201 -0.0204 -0.0156 5.0273 2.3733 2.4580 2.8636 -0.2426 -1.4844 -0.1844 0.2084 -0.0240 0.2844 -0.1336 -0.0529 -0.2673 0.2859 -0.0740 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 10 A 22 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 A 23 A 133 ? . . . . ? 'X-RAY DIFFRACTION' 3 2 A 200 A 201 ? . . . . ? 'X-RAY DIFFRACTION' 4 3 A 140 A 140 ? . . . . ? # _pdbx_phasing_MR.entry_id 3H6D _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 3.500 _pdbx_phasing_MR.d_res_low_rotation 19.160 _pdbx_phasing_MR.d_res_high_translation 3.500 _pdbx_phasing_MR.d_res_low_translation 19.160 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 2 MOLREP . ? program 'Alexei Vaguine' alexei@ysbl.york.ac.uk phasing http://www.ccp4.ac.uk/dist/html/molrep.html Fortran_77 ? 3 REFMAC refmac_5.2.0019 24/04/2001 program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 XDS . ? ? ? ? 'data reduction' ? ? ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O1A _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 DUP _pdbx_validate_close_contact.auth_seq_id_1 201 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 245 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.03 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ALA _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 100 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -143.30 _pdbx_validate_torsion.psi -31.22 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A HIS -10 ? CG ? A HIS 10 CG 2 1 Y 1 A HIS -10 ? ND1 ? A HIS 10 ND1 3 1 Y 1 A HIS -10 ? CD2 ? A HIS 10 CD2 4 1 Y 1 A HIS -10 ? CE1 ? A HIS 10 CE1 5 1 Y 1 A HIS -10 ? NE2 ? A HIS 10 NE2 6 1 Y 1 A ARG -3 ? CG ? A ARG 17 CG 7 1 Y 1 A ARG -3 ? CD ? A ARG 17 CD 8 1 Y 1 A ARG -3 ? NE ? A ARG 17 NE 9 1 Y 1 A ARG -3 ? CZ ? A ARG 17 CZ 10 1 Y 1 A ARG -3 ? NH1 ? A ARG 17 NH1 11 1 Y 1 A ARG -3 ? NH2 ? A ARG 17 NH2 12 1 Y 1 A SER -1 ? OG ? A SER 19 OG 13 1 Y 1 A MET 1 ? CG ? A MET 21 CG 14 1 Y 1 A MET 1 ? SD ? A MET 21 SD 15 1 Y 1 A MET 1 ? CE ? A MET 21 CE 16 1 Y 1 A GLU 132 ? CG ? A GLU 152 CG 17 1 Y 1 A GLU 132 ? CD ? A GLU 152 CD 18 1 Y 1 A GLU 132 ? OE1 ? A GLU 152 OE1 19 1 Y 1 A GLU 132 ? OE2 ? A GLU 152 OE2 20 1 Y 1 A ARG 140 ? N ? A ARG 160 N 21 1 Y 1 A ARG 140 ? CA ? A ARG 160 CA 22 1 Y 1 A ARG 140 ? C ? A ARG 160 C 23 1 Y 1 A ARG 140 ? O ? A ARG 160 O 24 1 Y 1 A ARG 140 ? CB ? A ARG 160 CB 25 1 Y 1 A ARG 140 ? CG ? A ARG 160 CG # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -19 ? A MET 1 2 1 Y 1 A GLY -18 ? A GLY 2 3 1 Y 1 A SER -17 ? A SER 3 4 1 Y 1 A SER -16 ? A SER 4 5 1 Y 1 A HIS -15 ? A HIS 5 6 1 Y 1 A HIS -14 ? A HIS 6 7 1 Y 1 A HIS -13 ? A HIS 7 8 1 Y 1 A HIS -12 ? A HIS 8 9 1 Y 1 A HIS -11 ? A HIS 9 10 1 Y 1 A GLY 134 ? A GLY 154 11 1 Y 1 A LEU 135 ? A LEU 155 12 1 Y 1 A ALA 136 ? A ALA 156 13 1 Y 1 A SER 137 ? A SER 157 14 1 Y 1 A THR 138 ? A THR 158 15 1 Y 1 A SER 139 ? A SER 159 16 1 Y 1 A GLY 141 ? A GLY 161 17 1 Y 1 A ASP 142 ? A ASP 162 18 1 Y 1 A GLY 143 ? A GLY 163 19 1 Y 1 A GLY 144 ? A GLY 164 20 1 Y 1 A HIS 145 ? A HIS 165 21 1 Y 1 A GLY 146 ? A GLY 166 22 1 Y 1 A SER 147 ? A SER 167 23 1 Y 1 A SER 148 ? A SER 168 24 1 Y 1 A GLY 149 ? A GLY 169 25 1 Y 1 A GLY 150 ? A GLY 170 26 1 Y 1 A HIS 151 ? A HIS 171 27 1 Y 1 A ALA 152 ? A ALA 172 28 1 Y 1 A SER 153 ? A SER 173 29 1 Y 1 A LEU 154 ? A LEU 174 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DUP O4 O N N 74 DUP C4 C Y N 75 DUP C5 C Y N 76 DUP C6 C Y N 77 DUP N3 N Y N 78 DUP C2 C Y N 79 DUP O2 O N N 80 DUP N1 N Y N 81 DUP "C1'" C N R 82 DUP "C2'" C N N 83 DUP "C3'" C N S 84 DUP "O3'" O N N 85 DUP "O4'" O N N 86 DUP "C4'" C N R 87 DUP "C5'" C N N 88 DUP "O5'" O N N 89 DUP PA P N S 90 DUP O1A O N N 91 DUP O2A O N N 92 DUP N3A N N N 93 DUP PB P N R 94 DUP O1B O N N 95 DUP O2B O N N 96 DUP O3B O N N 97 DUP PG P N N 98 DUP O2G O N N 99 DUP O1G O N N 100 DUP O3G O N N 101 DUP H5 H N N 102 DUP H6 H N N 103 DUP HN3 H N N 104 DUP "H1'" H N N 105 DUP "H2'1" H N N 106 DUP "H2'2" H N N 107 DUP H1 H N N 108 DUP "H3'" H N N 109 DUP "H4'" H N N 110 DUP "H5'1" H N N 111 DUP "H5'2" H N N 112 DUP H2A H N N 113 DUP H3A H N N 114 DUP H2B H N N 115 DUP H1G H N N 116 DUP H3G H N N 117 GLN N N N N 118 GLN CA C N S 119 GLN C C N N 120 GLN O O N N 121 GLN CB C N N 122 GLN CG C N N 123 GLN CD C N N 124 GLN OE1 O N N 125 GLN NE2 N N N 126 GLN OXT O N N 127 GLN H H N N 128 GLN H2 H N N 129 GLN HA H N N 130 GLN HB2 H N N 131 GLN HB3 H N N 132 GLN HG2 H N N 133 GLN HG3 H N N 134 GLN HE21 H N N 135 GLN HE22 H N N 136 GLN HXT H N N 137 GLU N N N N 138 GLU CA C N S 139 GLU C C N N 140 GLU O O N N 141 GLU CB C N N 142 GLU CG C N N 143 GLU CD C N N 144 GLU OE1 O N N 145 GLU OE2 O N N 146 GLU OXT O N N 147 GLU H H N N 148 GLU H2 H N N 149 GLU HA H N N 150 GLU HB2 H N N 151 GLU HB3 H N N 152 GLU HG2 H N N 153 GLU HG3 H N N 154 GLU HE2 H N N 155 GLU HXT H N N 156 GLY N N N N 157 GLY CA C N N 158 GLY C C N N 159 GLY O O N N 160 GLY OXT O N N 161 GLY H H N N 162 GLY H2 H N N 163 GLY HA2 H N N 164 GLY HA3 H N N 165 GLY HXT H N N 166 HIS N N N N 167 HIS CA C N S 168 HIS C C N N 169 HIS O O N N 170 HIS CB C N N 171 HIS CG C Y N 172 HIS ND1 N Y N 173 HIS CD2 C Y N 174 HIS CE1 C Y N 175 HIS NE2 N Y N 176 HIS OXT O N N 177 HIS H H N N 178 HIS H2 H N N 179 HIS HA H N N 180 HIS HB2 H N N 181 HIS HB3 H N N 182 HIS HD1 H N N 183 HIS HD2 H N N 184 HIS HE1 H N N 185 HIS HE2 H N N 186 HIS HXT H N N 187 HOH O O N N 188 HOH H1 H N N 189 HOH H2 H N N 190 ILE N N N N 191 ILE CA C N S 192 ILE C C N N 193 ILE O O N N 194 ILE CB C N S 195 ILE CG1 C N N 196 ILE CG2 C N N 197 ILE CD1 C N N 198 ILE OXT O N N 199 ILE H H N N 200 ILE H2 H N N 201 ILE HA H N N 202 ILE HB H N N 203 ILE HG12 H N N 204 ILE HG13 H N N 205 ILE HG21 H N N 206 ILE HG22 H N N 207 ILE HG23 H N N 208 ILE HD11 H N N 209 ILE HD12 H N N 210 ILE HD13 H N N 211 ILE HXT H N N 212 LEU N N N N 213 LEU CA C N S 214 LEU C C N N 215 LEU O O N N 216 LEU CB C N N 217 LEU CG C N N 218 LEU CD1 C N N 219 LEU CD2 C N N 220 LEU OXT O N N 221 LEU H H N N 222 LEU H2 H N N 223 LEU HA H N N 224 LEU HB2 H N N 225 LEU HB3 H N N 226 LEU HG H N N 227 LEU HD11 H N N 228 LEU HD12 H N N 229 LEU HD13 H N N 230 LEU HD21 H N N 231 LEU HD22 H N N 232 LEU HD23 H N N 233 LEU HXT H N N 234 LYS N N N N 235 LYS CA C N S 236 LYS C C N N 237 LYS O O N N 238 LYS CB C N N 239 LYS CG C N N 240 LYS CD C N N 241 LYS CE C N N 242 LYS NZ N N N 243 LYS OXT O N N 244 LYS H H N N 245 LYS H2 H N N 246 LYS HA H N N 247 LYS HB2 H N N 248 LYS HB3 H N N 249 LYS HG2 H N N 250 LYS HG3 H N N 251 LYS HD2 H N N 252 LYS HD3 H N N 253 LYS HE2 H N N 254 LYS HE3 H N N 255 LYS HZ1 H N N 256 LYS HZ2 H N N 257 LYS HZ3 H N N 258 LYS HXT H N N 259 MET N N N N 260 MET CA C N S 261 MET C C N N 262 MET O O N N 263 MET CB C N N 264 MET CG C N N 265 MET SD S N N 266 MET CE C N N 267 MET OXT O N N 268 MET H H N N 269 MET H2 H N N 270 MET HA H N N 271 MET HB2 H N N 272 MET HB3 H N N 273 MET HG2 H N N 274 MET HG3 H N N 275 MET HE1 H N N 276 MET HE2 H N N 277 MET HE3 H N N 278 MET HXT H N N 279 MG MG MG N N 280 PHE N N N N 281 PHE CA C N S 282 PHE C C N N 283 PHE O O N N 284 PHE CB C N N 285 PHE CG C Y N 286 PHE CD1 C Y N 287 PHE CD2 C Y N 288 PHE CE1 C Y N 289 PHE CE2 C Y N 290 PHE CZ C Y N 291 PHE OXT O N N 292 PHE H H N N 293 PHE H2 H N N 294 PHE HA H N N 295 PHE HB2 H N N 296 PHE HB3 H N N 297 PHE HD1 H N N 298 PHE HD2 H N N 299 PHE HE1 H N N 300 PHE HE2 H N N 301 PHE HZ H N N 302 PHE HXT H N N 303 PRO N N N N 304 PRO CA C N S 305 PRO C C N N 306 PRO O O N N 307 PRO CB C N N 308 PRO CG C N N 309 PRO CD C N N 310 PRO OXT O N N 311 PRO H H N N 312 PRO HA H N N 313 PRO HB2 H N N 314 PRO HB3 H N N 315 PRO HG2 H N N 316 PRO HG3 H N N 317 PRO HD2 H N N 318 PRO HD3 H N N 319 PRO HXT H N N 320 SER N N N N 321 SER CA C N S 322 SER C C N N 323 SER O O N N 324 SER CB C N N 325 SER OG O N N 326 SER OXT O N N 327 SER H H N N 328 SER H2 H N N 329 SER HA H N N 330 SER HB2 H N N 331 SER HB3 H N N 332 SER HG H N N 333 SER HXT H N N 334 THR N N N N 335 THR CA C N S 336 THR C C N N 337 THR O O N N 338 THR CB C N R 339 THR OG1 O N N 340 THR CG2 C N N 341 THR OXT O N N 342 THR H H N N 343 THR H2 H N N 344 THR HA H N N 345 THR HB H N N 346 THR HG1 H N N 347 THR HG21 H N N 348 THR HG22 H N N 349 THR HG23 H N N 350 THR HXT H N N 351 TRS C C N N 352 TRS C1 C N N 353 TRS C2 C N N 354 TRS C3 C N N 355 TRS N N N N 356 TRS O1 O N N 357 TRS O2 O N N 358 TRS O3 O N N 359 TRS H11 H N N 360 TRS H12 H N N 361 TRS H21 H N N 362 TRS H22 H N N 363 TRS H31 H N N 364 TRS H32 H N N 365 TRS HN1 H N N 366 TRS HN2 H N N 367 TRS HN3 H N N 368 TRS HO1 H N N 369 TRS HO2 H N N 370 TRS HO3 H N N 371 TYR N N N N 372 TYR CA C N S 373 TYR C C N N 374 TYR O O N N 375 TYR CB C N N 376 TYR CG C Y N 377 TYR CD1 C Y N 378 TYR CD2 C Y N 379 TYR CE1 C Y N 380 TYR CE2 C Y N 381 TYR CZ C Y N 382 TYR OH O N N 383 TYR OXT O N N 384 TYR H H N N 385 TYR H2 H N N 386 TYR HA H N N 387 TYR HB2 H N N 388 TYR HB3 H N N 389 TYR HD1 H N N 390 TYR HD2 H N N 391 TYR HE1 H N N 392 TYR HE2 H N N 393 TYR HH H N N 394 TYR HXT H N N 395 VAL N N N N 396 VAL CA C N S 397 VAL C C N N 398 VAL O O N N 399 VAL CB C N N 400 VAL CG1 C N N 401 VAL CG2 C N N 402 VAL OXT O N N 403 VAL H H N N 404 VAL H2 H N N 405 VAL HA H N N 406 VAL HB H N N 407 VAL HG11 H N N 408 VAL HG12 H N N 409 VAL HG13 H N N 410 VAL HG21 H N N 411 VAL HG22 H N N 412 VAL HG23 H N N 413 VAL HXT H N N 414 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DUP O4 C4 doub N N 70 DUP C4 C5 sing Y N 71 DUP C4 N3 sing Y N 72 DUP C5 C6 doub Y N 73 DUP C5 H5 sing N N 74 DUP C6 N1 sing Y N 75 DUP C6 H6 sing N N 76 DUP N3 C2 sing Y N 77 DUP N3 HN3 sing N N 78 DUP C2 O2 doub N N 79 DUP C2 N1 sing Y N 80 DUP N1 "C1'" sing N N 81 DUP "C1'" "C2'" sing N N 82 DUP "C1'" "O4'" sing N N 83 DUP "C1'" "H1'" sing N N 84 DUP "C2'" "C3'" sing N N 85 DUP "C2'" "H2'1" sing N N 86 DUP "C2'" "H2'2" sing N N 87 DUP "C3'" "O3'" sing N N 88 DUP "C3'" "C4'" sing N N 89 DUP "C3'" H1 sing N N 90 DUP "O3'" "H3'" sing N N 91 DUP "O4'" "C4'" sing N N 92 DUP "C4'" "C5'" sing N N 93 DUP "C4'" "H4'" sing N N 94 DUP "C5'" "O5'" sing N N 95 DUP "C5'" "H5'1" sing N N 96 DUP "C5'" "H5'2" sing N N 97 DUP "O5'" PA sing N N 98 DUP PA O1A doub N N 99 DUP PA O2A sing N N 100 DUP PA N3A sing N N 101 DUP O2A H2A sing N N 102 DUP N3A PB sing N N 103 DUP N3A H3A sing N N 104 DUP PB O1B doub N N 105 DUP PB O2B sing N N 106 DUP PB O3B sing N N 107 DUP O2B H2B sing N N 108 DUP O3B PG sing N N 109 DUP PG O2G doub N N 110 DUP PG O1G sing N N 111 DUP PG O3G sing N N 112 DUP O1G H1G sing N N 113 DUP O3G H3G sing N N 114 GLN N CA sing N N 115 GLN N H sing N N 116 GLN N H2 sing N N 117 GLN CA C sing N N 118 GLN CA CB sing N N 119 GLN CA HA sing N N 120 GLN C O doub N N 121 GLN C OXT sing N N 122 GLN CB CG sing N N 123 GLN CB HB2 sing N N 124 GLN CB HB3 sing N N 125 GLN CG CD sing N N 126 GLN CG HG2 sing N N 127 GLN CG HG3 sing N N 128 GLN CD OE1 doub N N 129 GLN CD NE2 sing N N 130 GLN NE2 HE21 sing N N 131 GLN NE2 HE22 sing N N 132 GLN OXT HXT sing N N 133 GLU N CA sing N N 134 GLU N H sing N N 135 GLU N H2 sing N N 136 GLU CA C sing N N 137 GLU CA CB sing N N 138 GLU CA HA sing N N 139 GLU C O doub N N 140 GLU C OXT sing N N 141 GLU CB CG sing N N 142 GLU CB HB2 sing N N 143 GLU CB HB3 sing N N 144 GLU CG CD sing N N 145 GLU CG HG2 sing N N 146 GLU CG HG3 sing N N 147 GLU CD OE1 doub N N 148 GLU CD OE2 sing N N 149 GLU OE2 HE2 sing N N 150 GLU OXT HXT sing N N 151 GLY N CA sing N N 152 GLY N H sing N N 153 GLY N H2 sing N N 154 GLY CA C sing N N 155 GLY CA HA2 sing N N 156 GLY CA HA3 sing N N 157 GLY C O doub N N 158 GLY C OXT sing N N 159 GLY OXT HXT sing N N 160 HIS N CA sing N N 161 HIS N H sing N N 162 HIS N H2 sing N N 163 HIS CA C sing N N 164 HIS CA CB sing N N 165 HIS CA HA sing N N 166 HIS C O doub N N 167 HIS C OXT sing N N 168 HIS CB CG sing N N 169 HIS CB HB2 sing N N 170 HIS CB HB3 sing N N 171 HIS CG ND1 sing Y N 172 HIS CG CD2 doub Y N 173 HIS ND1 CE1 doub Y N 174 HIS ND1 HD1 sing N N 175 HIS CD2 NE2 sing Y N 176 HIS CD2 HD2 sing N N 177 HIS CE1 NE2 sing Y N 178 HIS CE1 HE1 sing N N 179 HIS NE2 HE2 sing N N 180 HIS OXT HXT sing N N 181 HOH O H1 sing N N 182 HOH O H2 sing N N 183 ILE N CA sing N N 184 ILE N H sing N N 185 ILE N H2 sing N N 186 ILE CA C sing N N 187 ILE CA CB sing N N 188 ILE CA HA sing N N 189 ILE C O doub N N 190 ILE C OXT sing N N 191 ILE CB CG1 sing N N 192 ILE CB CG2 sing N N 193 ILE CB HB sing N N 194 ILE CG1 CD1 sing N N 195 ILE CG1 HG12 sing N N 196 ILE CG1 HG13 sing N N 197 ILE CG2 HG21 sing N N 198 ILE CG2 HG22 sing N N 199 ILE CG2 HG23 sing N N 200 ILE CD1 HD11 sing N N 201 ILE CD1 HD12 sing N N 202 ILE CD1 HD13 sing N N 203 ILE OXT HXT sing N N 204 LEU N CA sing N N 205 LEU N H sing N N 206 LEU N H2 sing N N 207 LEU CA C sing N N 208 LEU CA CB sing N N 209 LEU CA HA sing N N 210 LEU C O doub N N 211 LEU C OXT sing N N 212 LEU CB CG sing N N 213 LEU CB HB2 sing N N 214 LEU CB HB3 sing N N 215 LEU CG CD1 sing N N 216 LEU CG CD2 sing N N 217 LEU CG HG sing N N 218 LEU CD1 HD11 sing N N 219 LEU CD1 HD12 sing N N 220 LEU CD1 HD13 sing N N 221 LEU CD2 HD21 sing N N 222 LEU CD2 HD22 sing N N 223 LEU CD2 HD23 sing N N 224 LEU OXT HXT sing N N 225 LYS N CA sing N N 226 LYS N H sing N N 227 LYS N H2 sing N N 228 LYS CA C sing N N 229 LYS CA CB sing N N 230 LYS CA HA sing N N 231 LYS C O doub N N 232 LYS C OXT sing N N 233 LYS CB CG sing N N 234 LYS CB HB2 sing N N 235 LYS CB HB3 sing N N 236 LYS CG CD sing N N 237 LYS CG HG2 sing N N 238 LYS CG HG3 sing N N 239 LYS CD CE sing N N 240 LYS CD HD2 sing N N 241 LYS CD HD3 sing N N 242 LYS CE NZ sing N N 243 LYS CE HE2 sing N N 244 LYS CE HE3 sing N N 245 LYS NZ HZ1 sing N N 246 LYS NZ HZ2 sing N N 247 LYS NZ HZ3 sing N N 248 LYS OXT HXT sing N N 249 MET N CA sing N N 250 MET N H sing N N 251 MET N H2 sing N N 252 MET CA C sing N N 253 MET CA CB sing N N 254 MET CA HA sing N N 255 MET C O doub N N 256 MET C OXT sing N N 257 MET CB CG sing N N 258 MET CB HB2 sing N N 259 MET CB HB3 sing N N 260 MET CG SD sing N N 261 MET CG HG2 sing N N 262 MET CG HG3 sing N N 263 MET SD CE sing N N 264 MET CE HE1 sing N N 265 MET CE HE2 sing N N 266 MET CE HE3 sing N N 267 MET OXT HXT sing N N 268 PHE N CA sing N N 269 PHE N H sing N N 270 PHE N H2 sing N N 271 PHE CA C sing N N 272 PHE CA CB sing N N 273 PHE CA HA sing N N 274 PHE C O doub N N 275 PHE C OXT sing N N 276 PHE CB CG sing N N 277 PHE CB HB2 sing N N 278 PHE CB HB3 sing N N 279 PHE CG CD1 doub Y N 280 PHE CG CD2 sing Y N 281 PHE CD1 CE1 sing Y N 282 PHE CD1 HD1 sing N N 283 PHE CD2 CE2 doub Y N 284 PHE CD2 HD2 sing N N 285 PHE CE1 CZ doub Y N 286 PHE CE1 HE1 sing N N 287 PHE CE2 CZ sing Y N 288 PHE CE2 HE2 sing N N 289 PHE CZ HZ sing N N 290 PHE OXT HXT sing N N 291 PRO N CA sing N N 292 PRO N CD sing N N 293 PRO N H sing N N 294 PRO CA C sing N N 295 PRO CA CB sing N N 296 PRO CA HA sing N N 297 PRO C O doub N N 298 PRO C OXT sing N N 299 PRO CB CG sing N N 300 PRO CB HB2 sing N N 301 PRO CB HB3 sing N N 302 PRO CG CD sing N N 303 PRO CG HG2 sing N N 304 PRO CG HG3 sing N N 305 PRO CD HD2 sing N N 306 PRO CD HD3 sing N N 307 PRO OXT HXT sing N N 308 SER N CA sing N N 309 SER N H sing N N 310 SER N H2 sing N N 311 SER CA C sing N N 312 SER CA CB sing N N 313 SER CA HA sing N N 314 SER C O doub N N 315 SER C OXT sing N N 316 SER CB OG sing N N 317 SER CB HB2 sing N N 318 SER CB HB3 sing N N 319 SER OG HG sing N N 320 SER OXT HXT sing N N 321 THR N CA sing N N 322 THR N H sing N N 323 THR N H2 sing N N 324 THR CA C sing N N 325 THR CA CB sing N N 326 THR CA HA sing N N 327 THR C O doub N N 328 THR C OXT sing N N 329 THR CB OG1 sing N N 330 THR CB CG2 sing N N 331 THR CB HB sing N N 332 THR OG1 HG1 sing N N 333 THR CG2 HG21 sing N N 334 THR CG2 HG22 sing N N 335 THR CG2 HG23 sing N N 336 THR OXT HXT sing N N 337 TRS C C1 sing N N 338 TRS C C2 sing N N 339 TRS C C3 sing N N 340 TRS C N sing N N 341 TRS C1 O1 sing N N 342 TRS C1 H11 sing N N 343 TRS C1 H12 sing N N 344 TRS C2 O2 sing N N 345 TRS C2 H21 sing N N 346 TRS C2 H22 sing N N 347 TRS C3 O3 sing N N 348 TRS C3 H31 sing N N 349 TRS C3 H32 sing N N 350 TRS N HN1 sing N N 351 TRS N HN2 sing N N 352 TRS N HN3 sing N N 353 TRS O1 HO1 sing N N 354 TRS O2 HO2 sing N N 355 TRS O3 HO3 sing N N 356 TYR N CA sing N N 357 TYR N H sing N N 358 TYR N H2 sing N N 359 TYR CA C sing N N 360 TYR CA CB sing N N 361 TYR CA HA sing N N 362 TYR C O doub N N 363 TYR C OXT sing N N 364 TYR CB CG sing N N 365 TYR CB HB2 sing N N 366 TYR CB HB3 sing N N 367 TYR CG CD1 doub Y N 368 TYR CG CD2 sing Y N 369 TYR CD1 CE1 sing Y N 370 TYR CD1 HD1 sing N N 371 TYR CD2 CE2 doub Y N 372 TYR CD2 HD2 sing N N 373 TYR CE1 CZ doub Y N 374 TYR CE1 HE1 sing N N 375 TYR CE2 CZ sing Y N 376 TYR CE2 HE2 sing N N 377 TYR CZ OH sing N N 378 TYR OH HH sing N N 379 TYR OXT HXT sing N N 380 VAL N CA sing N N 381 VAL N H sing N N 382 VAL N H2 sing N N 383 VAL CA C sing N N 384 VAL CA CB sing N N 385 VAL CA HA sing N N 386 VAL C O doub N N 387 VAL C OXT sing N N 388 VAL CB CG1 sing N N 389 VAL CB CG2 sing N N 390 VAL CB HB sing N N 391 VAL CG1 HG11 sing N N 392 VAL CG1 HG12 sing N N 393 VAL CG1 HG13 sing N N 394 VAL CG2 HG21 sing N N 395 VAL CG2 HG22 sing N N 396 VAL CG2 HG23 sing N N 397 VAL OXT HXT sing N N 398 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 ;2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE ; DUP 4 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL TRS 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2PY4 _pdbx_initial_refinement_model.details 'PDB ENTRY 2PY4' #