HEADER BIOSYNTHETIC PROTEIN 28-APR-09 3H7Y TITLE CRYSTAL STRUCTURE OF BACB, AN ENZYME INVOLVED IN BACILYSIN SYNTHESIS, TITLE 2 IN TETRAGONAL FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: BACILYSIN BIOSYNTHESIS PROTEIN BACB; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 STRAIN: 168; SOURCE 5 GENE: YWFC, BACB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-22B KEYWDS BACB, YWFC, BACILYSIN SYNTHESIS, ANTICAPSIN SYNTHESIS, BI-CUPIN, KEYWDS 2 DOUBLE STRANDED BETA HELIX, ANTIBIOTIC BIOSYNTHESIS, BIOSYNTHETIC KEYWDS 3 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.RAJAVEL,B.GOPAL REVDAT 4 20-MAR-24 3H7Y 1 REMARK SEQADV LINK REVDAT 3 13-JUL-11 3H7Y 1 VERSN REVDAT 2 17-NOV-09 3H7Y 1 JRNL REVDAT 1 22-SEP-09 3H7Y 0 JRNL AUTH M.RAJAVEL,A.MITRA,B.GOPAL JRNL TITL ROLE OF BACILLUS SUBTILIS BACB IN THE SYNTHESIS OF BACILYSIN JRNL REF J.BIOL.CHEM. V. 284 31882 2009 JRNL REFN ISSN 0021-9258 JRNL PMID 19776011 JRNL DOI 10.1074/JBC.M109.014522 REMARK 2 REMARK 2 RESOLUTION. 2.22 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0066 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.22 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.33 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 24587 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1315 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.22 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.28 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1655 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.18 REMARK 3 BIN R VALUE (WORKING SET) : 0.2170 REMARK 3 BIN FREE R VALUE SET COUNT : 92 REMARK 3 BIN FREE R VALUE : 0.2410 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3538 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 29 REMARK 3 SOLVENT ATOMS : 163 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.02000 REMARK 3 B22 (A**2) : 0.02000 REMARK 3 B33 (A**2) : -0.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.285 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.229 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.149 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.711 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.928 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.882 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3647 ; 0.006 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4938 ; 1.026 ; 1.961 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 441 ; 6.504 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 177 ;36.258 ;24.237 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 616 ;14.231 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;13.532 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 521 ; 0.067 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2832 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2208 ; 0.432 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3594 ; 0.817 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1439 ; 1.120 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1344 ; 1.871 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 10 A 110 REMARK 3 RESIDUE RANGE : A 115 A 225 REMARK 3 ORIGIN FOR THE GROUP (A): 7.2074 22.9632 90.9828 REMARK 3 T TENSOR REMARK 3 T11: 0.0088 T22: 0.0237 REMARK 3 T33: 0.0126 T12: 0.0084 REMARK 3 T13: 0.0034 T23: -0.0097 REMARK 3 L TENSOR REMARK 3 L11: 0.9691 L22: 1.2330 REMARK 3 L33: 1.5926 L12: -0.3354 REMARK 3 L13: -0.3756 L23: 0.5112 REMARK 3 S TENSOR REMARK 3 S11: -0.0879 S12: -0.0544 S13: -0.0624 REMARK 3 S21: 0.0455 S22: 0.0425 S23: 0.0112 REMARK 3 S31: 0.0176 S32: -0.0066 S33: 0.0454 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 10 B 110 REMARK 3 RESIDUE RANGE : B 115 B 225 REMARK 3 ORIGIN FOR THE GROUP (A): 2.7158 49.5678 68.6400 REMARK 3 T TENSOR REMARK 3 T11: 0.0664 T22: 0.0198 REMARK 3 T33: 0.0822 T12: -0.0027 REMARK 3 T13: -0.0441 T23: -0.0290 REMARK 3 L TENSOR REMARK 3 L11: 1.4059 L22: 1.9862 REMARK 3 L33: 1.8026 L12: 0.7624 REMARK 3 L13: 0.8306 L23: 1.1723 REMARK 3 S TENSOR REMARK 3 S11: -0.1452 S12: -0.1282 S13: 0.3054 REMARK 3 S21: -0.1105 S22: -0.1116 S23: 0.2071 REMARK 3 S31: -0.1496 S32: -0.0824 S33: 0.2568 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3H7Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-MAY-09. REMARK 100 THE DEPOSITION ID IS D_1000052805. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-SEP-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25906 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.220 REMARK 200 RESOLUTION RANGE LOW (A) : 35.250 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 22.10 REMARK 200 R MERGE (I) : 0.10200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 31.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.21 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.0 REMARK 200 DATA REDUNDANCY IN SHELL : 23.30 REMARK 200 R MERGE FOR SHELL (I) : 0.38100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 10.10 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS, 10% PEG 8000, 60% MPD, 0.2M REMARK 280 NACL, PH 6.8, MICRO BATCH, TEMPERATURE 288K, MICROBATCH REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 105.76250 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 34.33050 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 34.33050 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 52.88125 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 34.33050 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 34.33050 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 158.64375 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 34.33050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 34.33050 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 52.88125 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 34.33050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 34.33050 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 158.64375 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 105.76250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BACB IS MONOMER IN SOLUTION, BUT DIMER IN CRYSTAL STRUCTURE REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 THR A 3 REMARK 465 LYS A 4 REMARK 465 GLU A 5 REMARK 465 ALA A 226 REMARK 465 LYS A 227 REMARK 465 ALA A 228 REMARK 465 LYS A 229 REMARK 465 LYS A 230 REMARK 465 MET A 231 REMARK 465 LYS A 232 REMARK 465 ALA A 233 REMARK 465 ASP A 234 REMARK 465 GLU A 235 REMARK 465 LEU A 236 REMARK 465 GLU A 237 REMARK 465 HIS A 238 REMARK 465 HIS A 239 REMARK 465 HIS A 240 REMARK 465 HIS A 241 REMARK 465 HIS A 242 REMARK 465 HIS A 243 REMARK 465 MET B 1 REMARK 465 LYS B 2 REMARK 465 THR B 3 REMARK 465 LYS B 4 REMARK 465 LYS B 227 REMARK 465 ALA B 228 REMARK 465 LYS B 229 REMARK 465 LYS B 230 REMARK 465 MET B 231 REMARK 465 LYS B 232 REMARK 465 ALA B 233 REMARK 465 ASP B 234 REMARK 465 GLU B 235 REMARK 465 LEU B 236 REMARK 465 GLU B 237 REMARK 465 HIS B 238 REMARK 465 HIS B 239 REMARK 465 HIS B 240 REMARK 465 HIS B 241 REMARK 465 HIS B 242 REMARK 465 HIS B 243 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 88 -0.80 64.68 REMARK 500 TYR A 121 -16.08 81.53 REMARK 500 ALA B 78 119.50 -36.94 REMARK 500 HIS B 88 -0.57 74.84 REMARK 500 GLU B 113 106.11 149.24 REMARK 500 ARG B 199 -1.32 81.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO A 244 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 50 NE2 REMARK 620 2 HIS A 52 NE2 93.0 REMARK 620 3 GLN A 56 OE1 172.0 90.4 REMARK 620 4 HIS A 91 NE2 96.8 94.1 90.1 REMARK 620 5 HOH A 327 O 89.8 89.4 83.1 172.4 REMARK 620 6 HOH A 328 O 83.5 172.6 92.3 92.8 84.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO A 245 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 162 NE2 REMARK 620 2 HIS A 164 NE2 94.2 REMARK 620 3 GLN A 168 OE1 172.6 80.5 REMARK 620 4 HIS A 202 NE2 88.9 91.4 86.1 REMARK 620 5 PPY A 246 O1 90.8 90.0 94.3 178.6 REMARK 620 6 PPY A 246 O3 95.1 166.5 91.0 98.4 80.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO B 244 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 50 NE2 REMARK 620 2 HIS B 52 NE2 97.8 REMARK 620 3 GLN B 56 OE1 174.3 85.9 REMARK 620 4 HIS B 91 NE2 97.7 90.5 86.5 REMARK 620 5 HOH B 267 O 89.3 83.0 86.9 171.0 REMARK 620 6 HOH B 282 O 80.2 177.1 95.9 91.9 94.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE B 247 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 119 O REMARK 620 2 GLU B 119 OE2 81.2 REMARK 620 3 PHE B 122 O 94.5 170.5 REMARK 620 4 HOH B 296 O 84.1 86.4 84.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO B 245 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 162 NE2 REMARK 620 2 HIS B 164 NE2 91.8 REMARK 620 3 GLN B 168 OE1 167.7 76.7 REMARK 620 4 HIS B 202 NE2 96.6 95.5 89.1 REMARK 620 5 PPY B 246 O2 76.8 85.3 97.5 173.4 REMARK 620 6 PPY B 246 O3 92.4 163.8 97.4 99.5 80.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO A 244 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO A 245 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PPY A 246 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO B 244 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO B 245 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PPY B 246 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE B 247 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3H7J RELATED DB: PDB REMARK 900 MONOCLINIC FORM OF BACB REMARK 900 RELATED ID: 3H9A RELATED DB: PDB REMARK 900 TRICLINIC FORM OF BACB DBREF 3H7Y A 1 235 UNP P39639 BACB_BACSU 1 235 DBREF 3H7Y B 1 235 UNP P39639 BACB_BACSU 1 235 SEQADV 3H7Y LEU A 236 UNP P39639 EXPRESSION TAG SEQADV 3H7Y GLU A 237 UNP P39639 EXPRESSION TAG SEQADV 3H7Y HIS A 238 UNP P39639 EXPRESSION TAG SEQADV 3H7Y HIS A 239 UNP P39639 EXPRESSION TAG SEQADV 3H7Y HIS A 240 UNP P39639 EXPRESSION TAG SEQADV 3H7Y HIS A 241 UNP P39639 EXPRESSION TAG SEQADV 3H7Y HIS A 242 UNP P39639 EXPRESSION TAG SEQADV 3H7Y HIS A 243 UNP P39639 EXPRESSION TAG SEQADV 3H7Y LEU B 236 UNP P39639 EXPRESSION TAG SEQADV 3H7Y GLU B 237 UNP P39639 EXPRESSION TAG SEQADV 3H7Y HIS B 238 UNP P39639 EXPRESSION TAG SEQADV 3H7Y HIS B 239 UNP P39639 EXPRESSION TAG SEQADV 3H7Y HIS B 240 UNP P39639 EXPRESSION TAG SEQADV 3H7Y HIS B 241 UNP P39639 EXPRESSION TAG SEQADV 3H7Y HIS B 242 UNP P39639 EXPRESSION TAG SEQADV 3H7Y HIS B 243 UNP P39639 EXPRESSION TAG SEQRES 1 A 243 MET LYS THR LYS GLU ASP MET GLN GLU LEU TYR PHE PRO SEQRES 2 A 243 THR PRO LYS LEU ILE GLU TRP GLU ASN GLY VAL ARG GLN SEQRES 3 A 243 TYR SER THR VAL ARG GLY ASP THR GLU VAL LEU MET SER SEQRES 4 A 243 TYR VAL PRO PRO HIS THR ASN VAL GLU PRO HIS GLN HIS SEQRES 5 A 243 LYS GLU VAL GLN ILE GLY MET VAL VAL SER GLY GLU LEU SEQRES 6 A 243 MET MET THR VAL GLY ASP VAL THR ARG LYS MET THR ALA SEQRES 7 A 243 LEU GLU SER ALA TYR ILE ALA PRO PRO HIS VAL PRO HIS SEQRES 8 A 243 GLY ALA ARG ASN ASP THR ASP GLN GLU VAL ILE ALA ILE SEQRES 9 A 243 ASP ILE LYS ARG LEU LYS ALA ASP GLU THR TYR THR SER SEQRES 10 A 243 PRO GLU ASP TYR PHE LEU ASP ILE PHE LYS THR ARG ASP SEQRES 11 A 243 LEU LEU PRO GLY MET GLU VAL THR PHE PHE VAL GLU ASP SEQRES 12 A 243 TRP VAL GLU ILE MET LEU ALA LYS ILE PRO GLY ASN GLY SEQRES 13 A 243 GLY GLU MET PRO PHE HIS LYS HIS ARG ASN GLU GLN ILE SEQRES 14 A 243 GLY ILE CYS ILE GLY GLY GLY TYR ASP MET THR VAL GLU SEQRES 15 A 243 GLY CYS THR VAL GLU MET LYS PHE GLY THR ALA TYR PHE SEQRES 16 A 243 CYS GLU PRO ARG GLU ASP HIS GLY ALA ILE ASN ARG SER SEQRES 17 A 243 GLU LYS GLU SER LYS SER ILE ASN ILE PHE PHE PRO PRO SEQRES 18 A 243 ARG TYR ASN ARG ALA LYS ALA LYS LYS MET LYS ALA ASP SEQRES 19 A 243 GLU LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 243 MET LYS THR LYS GLU ASP MET GLN GLU LEU TYR PHE PRO SEQRES 2 B 243 THR PRO LYS LEU ILE GLU TRP GLU ASN GLY VAL ARG GLN SEQRES 3 B 243 TYR SER THR VAL ARG GLY ASP THR GLU VAL LEU MET SER SEQRES 4 B 243 TYR VAL PRO PRO HIS THR ASN VAL GLU PRO HIS GLN HIS SEQRES 5 B 243 LYS GLU VAL GLN ILE GLY MET VAL VAL SER GLY GLU LEU SEQRES 6 B 243 MET MET THR VAL GLY ASP VAL THR ARG LYS MET THR ALA SEQRES 7 B 243 LEU GLU SER ALA TYR ILE ALA PRO PRO HIS VAL PRO HIS SEQRES 8 B 243 GLY ALA ARG ASN ASP THR ASP GLN GLU VAL ILE ALA ILE SEQRES 9 B 243 ASP ILE LYS ARG LEU LYS ALA ASP GLU THR TYR THR SER SEQRES 10 B 243 PRO GLU ASP TYR PHE LEU ASP ILE PHE LYS THR ARG ASP SEQRES 11 B 243 LEU LEU PRO GLY MET GLU VAL THR PHE PHE VAL GLU ASP SEQRES 12 B 243 TRP VAL GLU ILE MET LEU ALA LYS ILE PRO GLY ASN GLY SEQRES 13 B 243 GLY GLU MET PRO PHE HIS LYS HIS ARG ASN GLU GLN ILE SEQRES 14 B 243 GLY ILE CYS ILE GLY GLY GLY TYR ASP MET THR VAL GLU SEQRES 15 B 243 GLY CYS THR VAL GLU MET LYS PHE GLY THR ALA TYR PHE SEQRES 16 B 243 CYS GLU PRO ARG GLU ASP HIS GLY ALA ILE ASN ARG SER SEQRES 17 B 243 GLU LYS GLU SER LYS SER ILE ASN ILE PHE PHE PRO PRO SEQRES 18 B 243 ARG TYR ASN ARG ALA LYS ALA LYS LYS MET LYS ALA ASP SEQRES 19 B 243 GLU LEU GLU HIS HIS HIS HIS HIS HIS HET CO A 244 1 HET CO A 245 1 HET PPY A 246 12 HET CO B 244 1 HET CO B 245 1 HET PPY B 246 12 HET FE B 247 1 HETNAM CO COBALT (II) ION HETNAM PPY 3-PHENYLPYRUVIC ACID HETNAM FE FE (III) ION FORMUL 3 CO 4(CO 2+) FORMUL 5 PPY 2(C9 H8 O3) FORMUL 9 FE FE 3+ FORMUL 10 HOH *163(H2 O) HELIX 1 1 MET A 7 PHE A 12 1 6 HELIX 2 2 MET B 7 PHE B 12 1 6 HELIX 3 3 SER B 117 ASP B 120 5 4 SHEET 1 A14 PHE A 122 ASP A 124 0 SHEET 2 A14 SER A 81 ALA A 85 -1 N ALA A 82 O LEU A 123 SHEET 3 A14 VAL A 55 SER A 62 -1 N GLN A 56 O ALA A 85 SHEET 4 A14 VAL A 101 ARG A 108 -1 O ILE A 106 N ILE A 57 SHEET 5 A14 THR A 34 VAL A 41 -1 N SER A 39 O ALA A 103 SHEET 6 A14 ARG A 25 ARG A 31 -1 N THR A 29 O VAL A 36 SHEET 7 A14 LYS A 16 GLU A 19 -1 N LYS A 16 O SER A 28 SHEET 8 A14 LYS B 16 GLU B 19 -1 O LEU B 17 N GLU A 19 SHEET 9 A14 ARG B 25 ARG B 31 -1 O GLN B 26 N ILE B 18 SHEET 10 A14 THR B 34 VAL B 41 -1 O TYR B 40 N ARG B 25 SHEET 11 A14 VAL B 101 ARG B 108 -1 O VAL B 101 N VAL B 41 SHEET 12 A14 VAL B 55 SER B 62 -1 N VAL B 61 O ILE B 102 SHEET 13 A14 SER B 81 ALA B 85 -1 O ALA B 85 N GLN B 56 SHEET 14 A14 PHE B 122 ASP B 124 -1 O LEU B 123 N ALA B 82 SHEET 1 B 4 THR A 45 HIS A 50 0 SHEET 2 B 4 HIS A 91 ASN A 95 -1 O ALA A 93 N VAL A 47 SHEET 3 B 4 GLU A 64 VAL A 69 -1 N THR A 68 O GLY A 92 SHEET 4 B 4 VAL A 72 THR A 77 -1 O MET A 76 N LEU A 65 SHEET 1 C 6 LYS A 127 LEU A 132 0 SHEET 2 C 6 MET A 135 GLU A 142 -1 O VAL A 137 N ARG A 129 SHEET 3 C 6 VAL A 145 ILE A 152 -1 O ILE A 147 N PHE A 140 SHEET 4 C 6 SER A 212 PHE A 219 -1 O ASN A 216 N MET A 148 SHEET 5 C 6 GLU A 167 GLY A 174 -1 N ILE A 169 O ILE A 217 SHEET 6 C 6 ALA A 193 CYS A 196 -1 O CYS A 196 N GLN A 168 SHEET 1 D 4 GLY A 157 HIS A 162 0 SHEET 2 D 4 HIS A 202 ASN A 206 -1 O ALA A 204 N MET A 159 SHEET 3 D 4 TYR A 177 VAL A 181 -1 N THR A 180 O GLY A 203 SHEET 4 D 4 CYS A 184 MET A 188 -1 O VAL A 186 N MET A 179 SHEET 1 E 4 THR B 45 HIS B 50 0 SHEET 2 E 4 HIS B 91 ASN B 95 -1 O ALA B 93 N VAL B 47 SHEET 3 E 4 GLU B 64 VAL B 69 -1 N THR B 68 O GLY B 92 SHEET 4 E 4 VAL B 72 THR B 77 -1 O MET B 76 N LEU B 65 SHEET 1 F 6 LYS B 127 LEU B 132 0 SHEET 2 F 6 MET B 135 VAL B 141 -1 O VAL B 137 N ARG B 129 SHEET 3 F 6 GLU B 146 ILE B 152 -1 O LEU B 149 N THR B 138 SHEET 4 F 6 SER B 212 PHE B 219 -1 O ASN B 216 N MET B 148 SHEET 5 F 6 GLU B 167 GLY B 174 -1 N ILE B 173 O LYS B 213 SHEET 6 F 6 ALA B 193 CYS B 196 -1 O CYS B 196 N GLN B 168 SHEET 1 G 4 GLU B 158 HIS B 162 0 SHEET 2 G 4 HIS B 202 ILE B 205 -1 O ALA B 204 N MET B 159 SHEET 3 G 4 TYR B 177 VAL B 181 -1 N THR B 180 O GLY B 203 SHEET 4 G 4 CYS B 184 MET B 188 -1 O VAL B 186 N MET B 179 LINK NE2 HIS A 50 CO CO A 244 1555 1555 2.17 LINK NE2 HIS A 52 CO CO A 244 1555 1555 2.25 LINK OE1 GLN A 56 CO CO A 244 1555 1555 2.20 LINK NE2 HIS A 91 CO CO A 244 1555 1555 2.23 LINK NE2 HIS A 162 CO CO A 245 1555 1555 2.27 LINK NE2 HIS A 164 CO CO A 245 1555 1555 2.21 LINK OE1 GLN A 168 CO CO A 245 1555 1555 2.18 LINK NE2 HIS A 202 CO CO A 245 1555 1555 2.15 LINK CO CO A 244 O HOH A 327 1555 1555 2.20 LINK CO CO A 244 O HOH A 328 1555 1555 2.07 LINK CO CO A 245 O1 PPY A 246 1555 1555 2.09 LINK CO CO A 245 O3 PPY A 246 1555 1555 2.10 LINK NE2 HIS B 50 CO CO B 244 1555 1555 2.24 LINK NE2 HIS B 52 CO CO B 244 1555 1555 2.25 LINK OE1 GLN B 56 CO CO B 244 1555 1555 2.09 LINK NE2 HIS B 91 CO CO B 244 1555 1555 2.21 LINK O GLU B 119 FE FE B 247 1555 1555 2.30 LINK OE2 GLU B 119 FE FE B 247 1555 1555 2.35 LINK O PHE B 122 FE FE B 247 1555 1555 2.37 LINK NE2 HIS B 162 CO CO B 245 1555 1555 2.49 LINK NE2 HIS B 164 CO CO B 245 1555 1555 2.26 LINK OE1 GLN B 168 CO CO B 245 1555 1555 2.26 LINK NE2 HIS B 202 CO CO B 245 1555 1555 2.14 LINK CO CO B 244 O HOH B 267 1555 1555 2.60 LINK CO CO B 244 O HOH B 282 1555 1555 2.05 LINK CO CO B 245 O2 PPY B 246 1555 1555 1.89 LINK CO CO B 245 O3 PPY B 246 1555 1555 2.15 LINK FE FE B 247 O HOH B 296 1555 1555 2.25 CISPEP 1 PHE A 219 PRO A 220 0 -6.79 CISPEP 2 ALA B 111 ASP B 112 0 1.76 CISPEP 3 PHE B 219 PRO B 220 0 -8.09 SITE 1 AC1 6 HIS A 50 HIS A 52 GLN A 56 HIS A 91 SITE 2 AC1 6 HOH A 327 HOH A 328 SITE 1 AC2 5 HIS A 162 HIS A 164 GLN A 168 HIS A 202 SITE 2 AC2 5 PPY A 246 SITE 1 AC3 9 LEU A 131 MET A 159 HIS A 162 HIS A 164 SITE 2 AC3 9 GLN A 168 HIS A 202 PHE A 218 TYR A 223 SITE 3 AC3 9 CO A 245 SITE 1 AC4 6 HIS B 50 HIS B 52 GLN B 56 HIS B 91 SITE 2 AC4 6 HOH B 267 HOH B 282 SITE 1 AC5 5 HIS B 162 HIS B 164 GLN B 168 HIS B 202 SITE 2 AC5 5 PPY B 246 SITE 1 AC6 9 MET B 159 HIS B 162 HIS B 164 GLN B 168 SITE 2 AC6 9 HIS B 202 PHE B 218 ARG B 222 TYR B 223 SITE 3 AC6 9 CO B 245 SITE 1 AC7 5 ASP A 120 GLU B 119 PHE B 122 HOH B 252 SITE 2 AC7 5 HOH B 296 CRYST1 68.661 68.661 211.525 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014564 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014564 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004728 0.00000