data_3H8M # _entry.id 3H8M # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3H8M pdb_00003h8m 10.2210/pdb3h8m/pdb RCSB RCSB052829 ? ? WWPDB D_1000052829 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2REI 'Kinase domain of human ephrin type-a receptor 7 (EPHA7)' unspecified PDB 3DKO 'Complex between the kinase domain of human ephrin type-a receptor 7 (EPHA7) and inhibitor ALW-II-49-7' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3H8M _pdbx_database_status.recvd_initial_deposition_date 2009-04-29 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Walker, J.R.' 1 'Yermekbayeva, L.' 2 'Butler-Cole, C.' 3 'Bountra, C.' 4 'Weigelt, J.' 5 'Arrowsmith, C.H.' 6 'Edwards, A.M.' 7 'Bochkarev, A.' 8 'Dhe-Paganon, S.' 9 'Structural Genomics Consortium (SGC)' 10 # _citation.id primary _citation.title 'SAM Domain of Human Ephrin Type-A Receptor 7 (Epha7)' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Walker, J.R.' 1 ? primary 'Yermekbayeva, L.' 2 ? primary 'Butler-Cole, C.' 3 ? primary 'Bountra, C.' 4 ? primary 'Weigelt, J.' 5 ? primary 'Arrowsmith, C.H.' 6 ? primary 'Edwards, A.M.' 7 ? primary 'Bochkarev, A.' 8 ? primary 'Dhe-Paganon, S.' 9 ? # _cell.entry_id 3H8M _cell.length_a 40.071 _cell.length_b 54.089 _cell.length_c 40.455 _cell.angle_alpha 90.00 _cell.angle_beta 104.84 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3H8M _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ephrin type-A receptor 7' 10368.828 2 2.7.10.1 ? 'SAM DOMAIN, RESIDUES 919-990' ? 2 water nat water 18.015 53 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Tyrosine-protein kinase receptor EHK-3, EPH homology kinase 3, Receptor protein-tyrosine kinase HEK11' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MHHHHHHSSGRENLYFQGTPDFTTFCSVGEWLQAIKMERYKDNFTAAGYNSLESVARMTIEDVMSLGITLVGHQKKIMSS IQTMRAQMLH ; _entity_poly.pdbx_seq_one_letter_code_can ;MHHHHHHSSGRENLYFQGTPDFTTFCSVGEWLQAIKMERYKDNFTAAGYNSLESVARMTIEDVMSLGITLVGHQKKIMSS IQTMRAQMLH ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 SER n 1 9 SER n 1 10 GLY n 1 11 ARG n 1 12 GLU n 1 13 ASN n 1 14 LEU n 1 15 TYR n 1 16 PHE n 1 17 GLN n 1 18 GLY n 1 19 THR n 1 20 PRO n 1 21 ASP n 1 22 PHE n 1 23 THR n 1 24 THR n 1 25 PHE n 1 26 CYS n 1 27 SER n 1 28 VAL n 1 29 GLY n 1 30 GLU n 1 31 TRP n 1 32 LEU n 1 33 GLN n 1 34 ALA n 1 35 ILE n 1 36 LYS n 1 37 MET n 1 38 GLU n 1 39 ARG n 1 40 TYR n 1 41 LYS n 1 42 ASP n 1 43 ASN n 1 44 PHE n 1 45 THR n 1 46 ALA n 1 47 ALA n 1 48 GLY n 1 49 TYR n 1 50 ASN n 1 51 SER n 1 52 LEU n 1 53 GLU n 1 54 SER n 1 55 VAL n 1 56 ALA n 1 57 ARG n 1 58 MET n 1 59 THR n 1 60 ILE n 1 61 GLU n 1 62 ASP n 1 63 VAL n 1 64 MET n 1 65 SER n 1 66 LEU n 1 67 GLY n 1 68 ILE n 1 69 THR n 1 70 LEU n 1 71 VAL n 1 72 GLY n 1 73 HIS n 1 74 GLN n 1 75 LYS n 1 76 LYS n 1 77 ILE n 1 78 MET n 1 79 SER n 1 80 SER n 1 81 ILE n 1 82 GLN n 1 83 THR n 1 84 MET n 1 85 ARG n 1 86 ALA n 1 87 GLN n 1 88 MET n 1 89 LEU n 1 90 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'EHK3, EPHA7, HEK11' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)V2R' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET28-MHL _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code EPHA7_HUMAN _struct_ref.pdbx_db_accession Q15375 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code TPDFTTFCSVGEWLQAIKMERYKDNFTAAGYNSLESVARMTIEDVMSLGITLVGHQKKIMSSIQTMRAQMLH _struct_ref.pdbx_align_begin 919 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3H8M A 19 ? 90 ? Q15375 919 ? 990 ? 919 990 2 1 3H8M B 19 ? 90 ? Q15375 919 ? 990 ? 919 990 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3H8M MET A 1 ? UNP Q15375 ? ? 'expression tag' 901 1 1 3H8M HIS A 2 ? UNP Q15375 ? ? 'expression tag' 902 2 1 3H8M HIS A 3 ? UNP Q15375 ? ? 'expression tag' 903 3 1 3H8M HIS A 4 ? UNP Q15375 ? ? 'expression tag' 904 4 1 3H8M HIS A 5 ? UNP Q15375 ? ? 'expression tag' 905 5 1 3H8M HIS A 6 ? UNP Q15375 ? ? 'expression tag' 906 6 1 3H8M HIS A 7 ? UNP Q15375 ? ? 'expression tag' 907 7 1 3H8M SER A 8 ? UNP Q15375 ? ? 'expression tag' 908 8 1 3H8M SER A 9 ? UNP Q15375 ? ? 'expression tag' 909 9 1 3H8M GLY A 10 ? UNP Q15375 ? ? 'expression tag' 910 10 1 3H8M ARG A 11 ? UNP Q15375 ? ? 'expression tag' 911 11 1 3H8M GLU A 12 ? UNP Q15375 ? ? 'expression tag' 912 12 1 3H8M ASN A 13 ? UNP Q15375 ? ? 'expression tag' 913 13 1 3H8M LEU A 14 ? UNP Q15375 ? ? 'expression tag' 914 14 1 3H8M TYR A 15 ? UNP Q15375 ? ? 'expression tag' 915 15 1 3H8M PHE A 16 ? UNP Q15375 ? ? 'expression tag' 916 16 1 3H8M GLN A 17 ? UNP Q15375 ? ? 'expression tag' 917 17 1 3H8M GLY A 18 ? UNP Q15375 ? ? 'expression tag' 918 18 2 3H8M MET B 1 ? UNP Q15375 ? ? 'expression tag' 901 19 2 3H8M HIS B 2 ? UNP Q15375 ? ? 'expression tag' 902 20 2 3H8M HIS B 3 ? UNP Q15375 ? ? 'expression tag' 903 21 2 3H8M HIS B 4 ? UNP Q15375 ? ? 'expression tag' 904 22 2 3H8M HIS B 5 ? UNP Q15375 ? ? 'expression tag' 905 23 2 3H8M HIS B 6 ? UNP Q15375 ? ? 'expression tag' 906 24 2 3H8M HIS B 7 ? UNP Q15375 ? ? 'expression tag' 907 25 2 3H8M SER B 8 ? UNP Q15375 ? ? 'expression tag' 908 26 2 3H8M SER B 9 ? UNP Q15375 ? ? 'expression tag' 909 27 2 3H8M GLY B 10 ? UNP Q15375 ? ? 'expression tag' 910 28 2 3H8M ARG B 11 ? UNP Q15375 ? ? 'expression tag' 911 29 2 3H8M GLU B 12 ? UNP Q15375 ? ? 'expression tag' 912 30 2 3H8M ASN B 13 ? UNP Q15375 ? ? 'expression tag' 913 31 2 3H8M LEU B 14 ? UNP Q15375 ? ? 'expression tag' 914 32 2 3H8M TYR B 15 ? UNP Q15375 ? ? 'expression tag' 915 33 2 3H8M PHE B 16 ? UNP Q15375 ? ? 'expression tag' 916 34 2 3H8M GLN B 17 ? UNP Q15375 ? ? 'expression tag' 917 35 2 3H8M GLY B 18 ? UNP Q15375 ? ? 'expression tag' 918 36 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3H8M _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.043553 _exptl_crystal.density_percent_sol 39.810699 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293.1 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details 'WELL SOLUTION: 20% PEG 4000, 0.2 M SODIUM ACETATE, 0.1 M TRIS HCL PH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 293.1K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2009-04-03 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54178 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU FR-E SUPERBRIGHT' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.54178 _diffrn_source.pdbx_wavelength_list 1.54178 # _reflns.entry_id 3H8M _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 22.24 _reflns.d_resolution_high 2.100 _reflns.number_obs 9717 _reflns.number_all 9717 _reflns.percent_possible_obs 97.4 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.05000 _reflns.pdbx_netI_over_sigmaI 25.4000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.10 _reflns_shell.d_res_low 2.18 _reflns_shell.percent_possible_all 81.1 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.31500 _reflns_shell.meanI_over_sigI_obs 2.59 _reflns_shell.pdbx_redundancy 2.2 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3H8M _refine.ls_number_reflns_obs 9162 _refine.ls_number_reflns_all 9717 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 22.24 _refine.ls_d_res_high 2.10 _refine.ls_percent_reflns_obs 97.73 _refine.ls_R_factor_obs 0.19867 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19708 _refine.ls_R_factor_R_free 0.22767 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 458 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.955 _refine.correlation_coeff_Fo_to_Fc_free 0.942 _refine.B_iso_mean 20.025 _refine.aniso_B[1][1] 0.13 _refine.aniso_B[2][2] -1.82 _refine.aniso_B[3][3] 0.92 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -1.49 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS ; _refine.pdbx_starting_model 1B4F _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.228 _refine.pdbx_overall_ESU_R_Free 0.179 _refine.overall_SU_ML 0.149 _refine.overall_SU_B 13.109 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1174 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 55 _refine_hist.number_atoms_total 1229 _refine_hist.d_res_high 2.10 _refine_hist.d_res_low 22.24 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.011 0.022 ? 1193 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.245 1.944 ? 1604 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.632 5.000 ? 148 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 32.899 24.082 ? 49 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.278 15.000 ? 223 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 19.234 15.000 ? 6 'X-RAY DIFFRACTION' ? r_chiral_restr 0.074 0.200 ? 184 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 861 'X-RAY DIFFRACTION' ? r_mcbond_it 0.492 1.500 ? 741 'X-RAY DIFFRACTION' ? r_mcangle_it 0.989 2.000 ? 1193 'X-RAY DIFFRACTION' ? r_scbond_it 1.946 3.000 ? 452 'X-RAY DIFFRACTION' ? r_scangle_it 3.137 4.500 ? 411 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.100 _refine_ls_shell.d_res_low 2.154 _refine_ls_shell.number_reflns_R_work 555 _refine_ls_shell.R_factor_R_work 0.295 _refine_ls_shell.percent_reflns_obs 80.70 _refine_ls_shell.R_factor_R_free 0.354 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 18 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3H8M _struct.title 'SAM domain of human ephrin type-a receptor 7 (EPHA7)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3H8M _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text ;SAM DOMAIN, KINASE, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC, Alternative splicing, ATP-binding, Glycoprotein, Membrane, Nucleotide-binding, Phosphoprotein, Polymorphism, Receptor, Transferase, Transmembrane, Tyrosine-protein kinase ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 27 ? ILE A 35 ? SER A 927 ILE A 935 1 ? 9 HELX_P HELX_P2 2 LYS A 36 ? ARG A 39 ? LYS A 936 ARG A 939 5 ? 4 HELX_P HELX_P3 3 TYR A 40 ? ALA A 47 ? TYR A 940 ALA A 947 1 ? 8 HELX_P HELX_P4 4 SER A 51 ? ARG A 57 ? SER A 951 ARG A 957 1 ? 7 HELX_P HELX_P5 5 THR A 59 ? LEU A 66 ? THR A 959 LEU A 966 1 ? 8 HELX_P HELX_P6 6 LEU A 70 ? LEU A 89 ? LEU A 970 LEU A 989 1 ? 20 HELX_P HELX_P7 7 ASP B 21 ? PHE B 25 ? ASP B 921 PHE B 925 5 ? 5 HELX_P HELX_P8 8 SER B 27 ? ILE B 35 ? SER B 927 ILE B 935 1 ? 9 HELX_P HELX_P9 9 MET B 37 ? ARG B 39 ? MET B 937 ARG B 939 5 ? 3 HELX_P HELX_P10 10 TYR B 40 ? ALA B 47 ? TYR B 940 ALA B 947 1 ? 8 HELX_P HELX_P11 11 SER B 51 ? ARG B 57 ? SER B 951 ARG B 957 1 ? 7 HELX_P HELX_P12 12 THR B 59 ? SER B 65 ? THR B 959 SER B 965 1 ? 7 HELX_P HELX_P13 13 LEU B 70 ? HIS B 90 ? LEU B 970 HIS B 990 1 ? 21 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 26 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 26 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 926 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 926 _struct_conn.ptnr2_symmetry 2_657 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.397 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 3H8M _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3H8M _atom_sites.fract_transf_matrix[1][1] 0.024956 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.006613 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018488 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.025572 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 901 ? ? ? A . n A 1 2 HIS 2 902 ? ? ? A . n A 1 3 HIS 3 903 ? ? ? A . n A 1 4 HIS 4 904 ? ? ? A . n A 1 5 HIS 5 905 ? ? ? A . n A 1 6 HIS 6 906 ? ? ? A . n A 1 7 HIS 7 907 ? ? ? A . n A 1 8 SER 8 908 ? ? ? A . n A 1 9 SER 9 909 ? ? ? A . n A 1 10 GLY 10 910 ? ? ? A . n A 1 11 ARG 11 911 ? ? ? A . n A 1 12 GLU 12 912 ? ? ? A . n A 1 13 ASN 13 913 ? ? ? A . n A 1 14 LEU 14 914 ? ? ? A . n A 1 15 TYR 15 915 ? ? ? A . n A 1 16 PHE 16 916 ? ? ? A . n A 1 17 GLN 17 917 ? ? ? A . n A 1 18 GLY 18 918 ? ? ? A . n A 1 19 THR 19 919 919 THR THR A . n A 1 20 PRO 20 920 920 PRO PRO A . n A 1 21 ASP 21 921 921 ASP ASP A . n A 1 22 PHE 22 922 922 PHE PHE A . n A 1 23 THR 23 923 923 THR THR A . n A 1 24 THR 24 924 924 THR THR A . n A 1 25 PHE 25 925 925 PHE PHE A . n A 1 26 CYS 26 926 926 CYS CYS A . n A 1 27 SER 27 927 927 SER SER A . n A 1 28 VAL 28 928 928 VAL VAL A . n A 1 29 GLY 29 929 929 GLY GLY A . n A 1 30 GLU 30 930 930 GLU GLU A . n A 1 31 TRP 31 931 931 TRP TRP A . n A 1 32 LEU 32 932 932 LEU LEU A . n A 1 33 GLN 33 933 933 GLN GLN A . n A 1 34 ALA 34 934 934 ALA ALA A . n A 1 35 ILE 35 935 935 ILE ILE A . n A 1 36 LYS 36 936 936 LYS LYS A . n A 1 37 MET 37 937 937 MET MET A . n A 1 38 GLU 38 938 938 GLU GLU A . n A 1 39 ARG 39 939 939 ARG ARG A . n A 1 40 TYR 40 940 940 TYR TYR A . n A 1 41 LYS 41 941 941 LYS LYS A . n A 1 42 ASP 42 942 942 ASP ASP A . n A 1 43 ASN 43 943 943 ASN ASN A . n A 1 44 PHE 44 944 944 PHE PHE A . n A 1 45 THR 45 945 945 THR THR A . n A 1 46 ALA 46 946 946 ALA ALA A . n A 1 47 ALA 47 947 947 ALA ALA A . n A 1 48 GLY 48 948 948 GLY GLY A . n A 1 49 TYR 49 949 949 TYR TYR A . n A 1 50 ASN 50 950 950 ASN ASN A . n A 1 51 SER 51 951 951 SER SER A . n A 1 52 LEU 52 952 952 LEU LEU A . n A 1 53 GLU 53 953 953 GLU GLU A . n A 1 54 SER 54 954 954 SER SER A . n A 1 55 VAL 55 955 955 VAL VAL A . n A 1 56 ALA 56 956 956 ALA ALA A . n A 1 57 ARG 57 957 957 ARG ARG A . n A 1 58 MET 58 958 958 MET MET A . n A 1 59 THR 59 959 959 THR THR A . n A 1 60 ILE 60 960 960 ILE ILE A . n A 1 61 GLU 61 961 961 GLU GLU A . n A 1 62 ASP 62 962 962 ASP ASP A . n A 1 63 VAL 63 963 963 VAL VAL A . n A 1 64 MET 64 964 964 MET MET A . n A 1 65 SER 65 965 965 SER SER A . n A 1 66 LEU 66 966 966 LEU LEU A . n A 1 67 GLY 67 967 967 GLY GLY A . n A 1 68 ILE 68 968 968 ILE ILE A . n A 1 69 THR 69 969 969 THR THR A . n A 1 70 LEU 70 970 970 LEU LEU A . n A 1 71 VAL 71 971 971 VAL VAL A . n A 1 72 GLY 72 972 972 GLY GLY A . n A 1 73 HIS 73 973 973 HIS HIS A . n A 1 74 GLN 74 974 974 GLN GLN A . n A 1 75 LYS 75 975 975 LYS LYS A . n A 1 76 LYS 76 976 976 LYS LYS A . n A 1 77 ILE 77 977 977 ILE ILE A . n A 1 78 MET 78 978 978 MET MET A . n A 1 79 SER 79 979 979 SER SER A . n A 1 80 SER 80 980 980 SER SER A . n A 1 81 ILE 81 981 981 ILE ILE A . n A 1 82 GLN 82 982 982 GLN GLN A . n A 1 83 THR 83 983 983 THR THR A . n A 1 84 MET 84 984 984 MET MET A . n A 1 85 ARG 85 985 985 ARG ARG A . n A 1 86 ALA 86 986 986 ALA ALA A . n A 1 87 GLN 87 987 987 GLN GLN A . n A 1 88 MET 88 988 988 MET MET A . n A 1 89 LEU 89 989 989 LEU LEU A . n A 1 90 HIS 90 990 ? ? ? A . n B 1 1 MET 1 901 ? ? ? B . n B 1 2 HIS 2 902 ? ? ? B . n B 1 3 HIS 3 903 ? ? ? B . n B 1 4 HIS 4 904 ? ? ? B . n B 1 5 HIS 5 905 ? ? ? B . n B 1 6 HIS 6 906 ? ? ? B . n B 1 7 HIS 7 907 ? ? ? B . n B 1 8 SER 8 908 ? ? ? B . n B 1 9 SER 9 909 ? ? ? B . n B 1 10 GLY 10 910 ? ? ? B . n B 1 11 ARG 11 911 ? ? ? B . n B 1 12 GLU 12 912 912 GLU GLU B . n B 1 13 ASN 13 913 913 ASN ASN B . n B 1 14 LEU 14 914 914 LEU LEU B . n B 1 15 TYR 15 915 915 TYR TYR B . n B 1 16 PHE 16 916 916 PHE PHE B . n B 1 17 GLN 17 917 917 GLN GLN B . n B 1 18 GLY 18 918 918 GLY GLY B . n B 1 19 THR 19 919 919 THR THR B . n B 1 20 PRO 20 920 920 PRO PRO B . n B 1 21 ASP 21 921 921 ASP ASP B . n B 1 22 PHE 22 922 922 PHE PHE B . n B 1 23 THR 23 923 923 THR THR B . n B 1 24 THR 24 924 924 THR THR B . n B 1 25 PHE 25 925 925 PHE PHE B . n B 1 26 CYS 26 926 926 CYS CYS B . n B 1 27 SER 27 927 927 SER SER B . n B 1 28 VAL 28 928 928 VAL VAL B . n B 1 29 GLY 29 929 929 GLY GLY B . n B 1 30 GLU 30 930 930 GLU GLU B . n B 1 31 TRP 31 931 931 TRP TRP B . n B 1 32 LEU 32 932 932 LEU LEU B . n B 1 33 GLN 33 933 933 GLN GLN B . n B 1 34 ALA 34 934 934 ALA ALA B . n B 1 35 ILE 35 935 935 ILE ILE B . n B 1 36 LYS 36 936 936 LYS LYS B . n B 1 37 MET 37 937 937 MET MET B . n B 1 38 GLU 38 938 938 GLU GLU B . n B 1 39 ARG 39 939 939 ARG ARG B . n B 1 40 TYR 40 940 940 TYR TYR B . n B 1 41 LYS 41 941 941 LYS LYS B . n B 1 42 ASP 42 942 942 ASP ASP B . n B 1 43 ASN 43 943 943 ASN ASN B . n B 1 44 PHE 44 944 944 PHE PHE B . n B 1 45 THR 45 945 945 THR THR B . n B 1 46 ALA 46 946 946 ALA ALA B . n B 1 47 ALA 47 947 947 ALA ALA B . n B 1 48 GLY 48 948 948 GLY GLY B . n B 1 49 TYR 49 949 949 TYR TYR B . n B 1 50 ASN 50 950 950 ASN ASN B . n B 1 51 SER 51 951 951 SER SER B . n B 1 52 LEU 52 952 952 LEU LEU B . n B 1 53 GLU 53 953 953 GLU GLU B . n B 1 54 SER 54 954 954 SER SER B . n B 1 55 VAL 55 955 955 VAL VAL B . n B 1 56 ALA 56 956 956 ALA ALA B . n B 1 57 ARG 57 957 957 ARG ARG B . n B 1 58 MET 58 958 958 MET MET B . n B 1 59 THR 59 959 959 THR THR B . n B 1 60 ILE 60 960 960 ILE ILE B . n B 1 61 GLU 61 961 961 GLU GLU B . n B 1 62 ASP 62 962 962 ASP ASP B . n B 1 63 VAL 63 963 963 VAL VAL B . n B 1 64 MET 64 964 964 MET MET B . n B 1 65 SER 65 965 965 SER SER B . n B 1 66 LEU 66 966 966 LEU LEU B . n B 1 67 GLY 67 967 967 GLY GLY B . n B 1 68 ILE 68 968 968 ILE ILE B . n B 1 69 THR 69 969 969 THR THR B . n B 1 70 LEU 70 970 970 LEU LEU B . n B 1 71 VAL 71 971 971 VAL VAL B . n B 1 72 GLY 72 972 972 GLY GLY B . n B 1 73 HIS 73 973 973 HIS HIS B . n B 1 74 GLN 74 974 974 GLN GLN B . n B 1 75 LYS 75 975 975 LYS LYS B . n B 1 76 LYS 76 976 976 LYS LYS B . n B 1 77 ILE 77 977 977 ILE ILE B . n B 1 78 MET 78 978 978 MET MET B . n B 1 79 SER 79 979 979 SER SER B . n B 1 80 SER 80 980 980 SER SER B . n B 1 81 ILE 81 981 981 ILE ILE B . n B 1 82 GLN 82 982 982 GLN GLN B . n B 1 83 THR 83 983 983 THR THR B . n B 1 84 MET 84 984 984 MET MET B . n B 1 85 ARG 85 985 985 ARG ARG B . n B 1 86 ALA 86 986 986 ALA ALA B . n B 1 87 GLN 87 987 987 GLN GLN B . n B 1 88 MET 88 988 988 MET MET B . n B 1 89 LEU 89 989 989 LEU LEU B . n B 1 90 HIS 90 990 990 HIS HIS B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 1 1 HOH HOH A . C 2 HOH 2 3 3 HOH HOH A . C 2 HOH 3 4 4 HOH HOH A . C 2 HOH 4 7 7 HOH HOH A . C 2 HOH 5 10 10 HOH HOH A . C 2 HOH 6 11 11 HOH HOH A . C 2 HOH 7 14 14 HOH HOH A . C 2 HOH 8 18 18 HOH HOH A . C 2 HOH 9 19 19 HOH HOH A . C 2 HOH 10 21 21 HOH HOH A . C 2 HOH 11 23 23 HOH HOH A . C 2 HOH 12 24 24 HOH HOH A . C 2 HOH 13 26 26 HOH HOH A . C 2 HOH 14 27 27 HOH HOH A . C 2 HOH 15 28 28 HOH HOH A . C 2 HOH 16 30 30 HOH HOH A . C 2 HOH 17 32 32 HOH HOH A . C 2 HOH 18 33 33 HOH HOH A . C 2 HOH 19 35 35 HOH HOH A . C 2 HOH 20 36 36 HOH HOH A . C 2 HOH 21 39 39 HOH HOH A . C 2 HOH 22 41 41 HOH HOH A . C 2 HOH 23 42 42 HOH HOH A . C 2 HOH 24 50 50 HOH HOH A . C 2 HOH 25 51 51 HOH HOH A . C 2 HOH 26 53 53 HOH HOH A . D 2 HOH 1 2 2 HOH HOH B . D 2 HOH 2 5 5 HOH HOH B . D 2 HOH 3 6 6 HOH HOH B . D 2 HOH 4 8 8 HOH HOH B . D 2 HOH 5 9 9 HOH HOH B . D 2 HOH 6 12 12 HOH HOH B . D 2 HOH 7 13 13 HOH HOH B . D 2 HOH 8 15 15 HOH HOH B . D 2 HOH 9 16 16 HOH HOH B . D 2 HOH 10 17 17 HOH HOH B . D 2 HOH 11 20 20 HOH HOH B . D 2 HOH 12 22 22 HOH HOH B . D 2 HOH 13 25 25 HOH HOH B . D 2 HOH 14 29 29 HOH HOH B . D 2 HOH 15 31 31 HOH HOH B . D 2 HOH 16 34 34 HOH HOH B . D 2 HOH 17 37 37 HOH HOH B . D 2 HOH 18 38 38 HOH HOH B . D 2 HOH 19 40 40 HOH HOH B . D 2 HOH 20 43 43 HOH HOH B . D 2 HOH 21 44 44 HOH HOH B . D 2 HOH 22 45 45 HOH HOH B . D 2 HOH 23 46 46 HOH HOH B . D 2 HOH 24 47 47 HOH HOH B . D 2 HOH 25 48 48 HOH HOH B . D 2 HOH 26 49 49 HOH HOH B . D 2 HOH 27 52 52 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C 2 1 B,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-05-26 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 4 'Structure model' 1 3 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_initial_refinement_model 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.name' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 14.3423 11.9869 44.5416 0.2273 0.2221 0.2890 0.0449 0.0321 0.0119 4.6306 6.2919 7.1513 1.8676 2.4442 1.2997 -0.2248 -0.4499 -0.5946 0.6820 0.1213 -0.1129 0.3229 -0.1707 0.1035 'X-RAY DIFFRACTION' 2 ? refined 16.0691 10.9414 32.9668 0.1617 0.2130 0.2207 -0.0379 -0.0110 -0.0166 4.3244 5.4547 8.7925 3.1104 0.6865 0.9971 0.1210 -0.1176 0.0898 0.1550 -0.0082 -0.5692 -0.0421 0.4289 -0.1128 'X-RAY DIFFRACTION' 3 ? refined 15.2428 3.3895 34.5953 0.1681 0.2083 0.1810 -0.0068 -0.0038 -0.0067 8.2892 11.7361 5.4023 -3.6405 3.0837 -0.8806 -0.0709 -0.0881 -0.1743 0.0590 0.0513 -0.4404 0.1495 0.4667 0.0196 'X-RAY DIFFRACTION' 4 ? refined 13.0868 -1.5280 29.3564 0.2073 0.2225 0.3445 0.0138 0.0139 0.0039 0.6189 8.2283 7.2946 2.2235 0.7852 1.8217 0.0291 0.0164 -0.2639 0.0870 0.0300 -0.8628 0.3473 0.3240 -0.0591 'X-RAY DIFFRACTION' 5 ? refined 9.0339 5.4946 23.8872 0.1857 0.1926 0.1778 -0.0150 -0.0010 -0.0128 2.0098 4.5935 7.8721 0.1692 1.3769 -2.3318 0.0033 0.2934 0.0514 -0.3009 -0.0052 -0.2670 -0.1262 0.2276 0.0019 'X-RAY DIFFRACTION' 6 ? refined 7.4826 12.9667 29.6941 0.2240 0.2188 0.2328 0.0081 -0.0139 0.0100 7.6681 8.0561 7.9253 -0.8973 -2.6126 1.0070 -0.0475 0.0964 0.7153 -0.3380 0.1091 -0.0639 -0.3112 0.4162 -0.0616 'X-RAY DIFFRACTION' 7 ? refined 2.0308 10.3818 33.5785 0.1941 0.2058 0.2048 0.0104 -0.0073 -0.0093 9.9818 4.5515 5.3318 4.9816 -3.2410 1.3522 0.0069 0.1761 0.4584 -0.2127 0.0354 0.3066 -0.3441 -0.0996 -0.0423 'X-RAY DIFFRACTION' 8 ? refined -1.8801 1.7756 31.4268 0.2134 0.2745 0.2470 -0.0356 -0.0119 -0.0081 9.1047 7.8412 7.5902 -5.0946 -3.7560 -3.3881 -0.0725 0.2052 -0.3820 0.0561 0.1357 0.4178 0.0160 -0.3812 -0.0632 'X-RAY DIFFRACTION' 9 ? refined 3.3995 -3.7226 29.3757 0.2198 0.2226 0.2881 -0.0129 -0.0212 0.0033 1.0890 7.8088 8.2896 -2.1114 0.7034 -6.7160 0.0374 0.0445 -0.1156 -0.0560 -0.0594 0.0391 -0.0566 -0.0340 0.0221 'X-RAY DIFFRACTION' 10 ? refined 6.4049 -2.8766 36.4376 0.1859 0.2581 0.2436 -0.0159 -0.0345 0.0216 0.1742 8.1147 9.1536 -1.0052 0.8442 -1.4984 -0.0389 -0.0126 -0.0181 0.3316 0.0858 0.1599 0.1281 0.1219 -0.0469 'X-RAY DIFFRACTION' 11 ? refined 5.6655 5.3301 40.8270 0.2169 0.2405 0.2263 -0.0105 -0.0033 0.0053 3.1805 8.7130 2.5134 1.3116 -0.9754 0.1143 0.0867 -0.4608 0.1703 0.3811 -0.0461 0.1740 -0.0923 -0.1810 -0.0406 'X-RAY DIFFRACTION' 12 ? refined 5.6812 13.3750 41.5459 0.2112 0.2332 0.2473 -0.0056 0.0173 -0.0159 9.6181 6.3171 5.3019 0.4284 2.7619 -0.4865 -0.1086 0.1594 -0.0180 -0.3765 0.0158 0.0380 0.0510 -0.1376 0.0928 'X-RAY DIFFRACTION' 13 ? refined -3.6219 -0.9956 22.7928 0.3797 0.3535 0.3445 0.0226 -0.0087 -0.0005 4.6927 2.4689 5.9003 3.3649 2.7866 1.5155 0.1201 -0.0359 0.0365 0.0532 -0.0161 0.0586 0.1993 0.0098 -0.1040 'X-RAY DIFFRACTION' 14 ? refined -8.1332 -3.5503 33.0030 0.2799 0.2666 0.2956 -0.0110 0.0194 0.0147 5.2674 7.1413 3.3680 -1.4422 0.7717 -0.6140 -0.0055 0.5175 0.4667 -0.5155 -0.0168 0.0787 -0.2940 -0.1638 0.0223 'X-RAY DIFFRACTION' 15 ? refined -3.3282 -5.8207 43.0269 0.1921 0.2062 0.2654 0.0372 -0.0035 -0.0231 1.4811 4.3539 4.8492 2.5246 1.2245 1.6766 -0.0164 0.0218 -0.1660 -0.0780 0.0448 -0.2615 0.3021 0.1562 -0.0283 'X-RAY DIFFRACTION' 16 ? refined -3.7994 3.0415 42.7731 0.1797 0.2023 0.1898 -0.0126 0.0114 0.0086 4.9273 6.9387 3.9230 0.6543 0.3749 -1.3618 0.1288 0.1182 0.0458 0.0410 -0.1153 -0.4573 -0.0628 0.2282 -0.0135 'X-RAY DIFFRACTION' 17 ? refined -4.4765 8.4431 48.1167 0.2521 0.2172 0.2179 -0.0395 0.0005 -0.0221 8.0651 1.0929 9.0860 -0.4122 3.3622 -0.3719 -0.2065 -0.1578 0.3559 -0.0788 0.2541 -0.3919 0.1398 0.1274 -0.0476 'X-RAY DIFFRACTION' 18 ? refined -7.9107 3.6269 54.9412 0.2367 0.2067 0.1509 -0.0100 -0.0007 0.0001 4.3052 1.6428 8.6389 0.2149 0.4357 0.2088 0.1624 -0.5566 -0.0366 0.4905 -0.1596 -0.1536 0.2525 0.0578 -0.0028 'X-RAY DIFFRACTION' 19 ? refined -9.3120 -4.4862 51.3441 0.2412 0.2129 0.2260 -0.0275 0.0042 0.0318 7.4794 4.3372 6.7614 -2.6509 -1.9335 1.9965 -0.0120 -0.2181 -0.0157 0.1198 0.1171 -0.1928 -0.1813 0.1934 -0.1051 'X-RAY DIFFRACTION' 20 ? refined -15.8766 -3.8480 48.3577 0.2092 0.2318 0.2974 -0.0084 0.0189 0.0110 8.4197 2.2578 6.2202 -0.2655 0.3672 -0.1373 -0.0726 -0.1637 -0.1736 0.1297 0.0256 0.3898 0.1528 -0.4704 0.0470 'X-RAY DIFFRACTION' 21 ? refined -19.7052 4.9886 49.6660 0.3027 0.2995 0.3398 0.0415 0.0010 -0.0011 4.6497 2.2665 7.4329 -0.0452 0.9882 -2.3797 0.0860 0.1256 0.1224 -0.1083 -0.0591 0.6822 -0.0617 -0.4145 -0.0269 'X-RAY DIFFRACTION' 22 ? refined -14.2842 11.5008 48.4759 0.3526 0.2483 0.2360 0.0451 0.0007 0.0097 1.4200 8.0337 8.8852 -1.9675 3.2414 -7.2087 -0.0267 -0.2559 0.0915 0.2413 0.0853 0.2513 -0.0022 -0.4666 -0.0586 'X-RAY DIFFRACTION' 23 ? refined -14.0165 8.0715 42.0485 0.2280 0.2456 0.2146 -0.0009 0.0075 0.0213 7.9732 8.7250 8.1376 0.3013 6.0109 5.8318 -0.0926 0.0457 -0.1113 -0.0754 0.0903 0.1109 -0.1239 0.0698 0.0022 'X-RAY DIFFRACTION' 24 ? refined -14.3638 -1.3053 39.7372 0.1792 0.2080 0.2234 -0.0004 -0.0162 -0.0016 2.2187 11.7424 5.7794 2.3946 -2.5556 2.3296 0.0615 0.0975 0.0662 0.0284 -0.0280 0.2091 -0.0765 -0.1610 -0.0335 'X-RAY DIFFRACTION' 25 ? refined -15.6542 -8.9926 40.1982 0.1884 0.2038 0.2362 -0.0031 0.0003 -0.0018 6.6856 9.2339 8.4584 1.0718 -1.0328 -2.9132 -0.1284 -0.3533 -0.1386 0.2920 0.0601 0.5523 0.1297 -0.4682 0.0684 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 919 ? ? A 924 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 925 ? ? A 930 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 931 ? ? A 936 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 937 ? ? A 940 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 941 ? ? A 948 ? ? ? ? 'X-RAY DIFFRACTION' 6 6 A 949 ? ? A 953 ? ? ? ? 'X-RAY DIFFRACTION' 7 7 A 954 ? ? A 959 ? ? ? ? 'X-RAY DIFFRACTION' 8 8 A 960 ? ? A 964 ? ? ? ? 'X-RAY DIFFRACTION' 9 9 A 965 ? ? A 971 ? ? ? ? 'X-RAY DIFFRACTION' 10 10 A 972 ? ? A 977 ? ? ? ? 'X-RAY DIFFRACTION' 11 11 A 978 ? ? A 983 ? ? ? ? 'X-RAY DIFFRACTION' 12 12 A 984 ? ? A 989 ? ? ? ? 'X-RAY DIFFRACTION' 13 13 B 912 ? ? B 916 ? ? ? ? 'X-RAY DIFFRACTION' 14 14 B 917 ? ? B 922 ? ? ? ? 'X-RAY DIFFRACTION' 15 15 B 923 ? ? B 928 ? ? ? ? 'X-RAY DIFFRACTION' 16 16 B 929 ? ? B 937 ? ? ? ? 'X-RAY DIFFRACTION' 17 17 B 938 ? ? B 941 ? ? ? ? 'X-RAY DIFFRACTION' 18 18 B 942 ? ? B 948 ? ? ? ? 'X-RAY DIFFRACTION' 19 19 B 949 ? ? B 953 ? ? ? ? 'X-RAY DIFFRACTION' 20 20 B 954 ? ? B 959 ? ? ? ? 'X-RAY DIFFRACTION' 21 21 B 960 ? ? B 964 ? ? ? ? 'X-RAY DIFFRACTION' 22 22 B 965 ? ? B 972 ? ? ? ? 'X-RAY DIFFRACTION' 23 23 B 973 ? ? B 978 ? ? ? ? 'X-RAY DIFFRACTION' 24 24 B 979 ? ? B 984 ? ? ? ? 'X-RAY DIFFRACTION' 25 25 B 985 ? ? B 990 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SBC-Collect 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.5.0063 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B GLU 912 ? CG ? B GLU 12 CG 2 1 Y 1 B GLU 912 ? CD ? B GLU 12 CD 3 1 Y 1 B GLU 912 ? OE1 ? B GLU 12 OE1 4 1 Y 1 B GLU 912 ? OE2 ? B GLU 12 OE2 5 1 Y 1 B GLN 917 ? CG ? B GLN 17 CG 6 1 Y 1 B GLN 917 ? CD ? B GLN 17 CD 7 1 Y 1 B GLN 917 ? OE1 ? B GLN 17 OE1 8 1 Y 1 B GLN 917 ? NE2 ? B GLN 17 NE2 9 1 Y 1 B GLU 953 ? CD ? B GLU 53 CD 10 1 Y 1 B GLU 953 ? OE1 ? B GLU 53 OE1 11 1 Y 1 B GLU 953 ? OE2 ? B GLU 53 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 901 ? A MET 1 2 1 Y 1 A HIS 902 ? A HIS 2 3 1 Y 1 A HIS 903 ? A HIS 3 4 1 Y 1 A HIS 904 ? A HIS 4 5 1 Y 1 A HIS 905 ? A HIS 5 6 1 Y 1 A HIS 906 ? A HIS 6 7 1 Y 1 A HIS 907 ? A HIS 7 8 1 Y 1 A SER 908 ? A SER 8 9 1 Y 1 A SER 909 ? A SER 9 10 1 Y 1 A GLY 910 ? A GLY 10 11 1 Y 1 A ARG 911 ? A ARG 11 12 1 Y 1 A GLU 912 ? A GLU 12 13 1 Y 1 A ASN 913 ? A ASN 13 14 1 Y 1 A LEU 914 ? A LEU 14 15 1 Y 1 A TYR 915 ? A TYR 15 16 1 Y 1 A PHE 916 ? A PHE 16 17 1 Y 1 A GLN 917 ? A GLN 17 18 1 Y 1 A GLY 918 ? A GLY 18 19 1 Y 1 A HIS 990 ? A HIS 90 20 1 Y 1 B MET 901 ? B MET 1 21 1 Y 1 B HIS 902 ? B HIS 2 22 1 Y 1 B HIS 903 ? B HIS 3 23 1 Y 1 B HIS 904 ? B HIS 4 24 1 Y 1 B HIS 905 ? B HIS 5 25 1 Y 1 B HIS 906 ? B HIS 6 26 1 Y 1 B HIS 907 ? B HIS 7 27 1 Y 1 B SER 908 ? B SER 8 28 1 Y 1 B SER 909 ? B SER 9 29 1 Y 1 B GLY 910 ? B GLY 10 30 1 Y 1 B ARG 911 ? B ARG 11 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1B4F _pdbx_initial_refinement_model.details ? #