data_3H8Z # _entry.id 3H8Z # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3H8Z RCSB RCSB052842 WWPDB D_1000052842 # _pdbx_database_status.entry_id 3H8Z _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-04-29 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Amaya, M.F.' 1 'Dong, A.' 2 'Adams-Cioaba, M.A.' 3 'Guo, Y.' 4 'MacKenzie, F.' 5 'Kozieradzki, I.' 6 'Edwards, A.M.' 7 'Arrowsmith, C.H.' 8 'Bochkarev, A.' 9 'Min, J.' 10 'Structural Genomics Consortium (SGC)' 11 # _citation.id primary _citation.title 'Structural Studies of the Tandem Tudor Domains of Fragile X Mental Retardation Related Proteins FXR1 and FXR2.' _citation.journal_abbrev 'Plos One' _citation.journal_volume 5 _citation.page_first e13559 _citation.page_last e13559 _citation.year 2010 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1932-6203 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21072162 _citation.pdbx_database_id_DOI 10.1371/journal.pone.0013559 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Adams-Cioaba, M.A.' 1 primary 'Guo, Y.' 2 primary 'Bian, C.' 3 primary 'Amaya, M.F.' 4 primary 'Lam, R.' 5 primary 'Wasney, G.A.' 6 primary 'Vedadi, M.' 7 primary 'Xu, C.' 8 primary 'Min, J.' 9 # _cell.length_a 34.563 _cell.length_b 54.676 _cell.length_c 70.171 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3H8Z _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 3H8Z _symmetry.Int_Tables_number 19 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Fragile X mental retardation syndrome-related protein 2' 14812.163 1 ? ? 'UNP residues 13-136' ? 2 water nat water 18.015 63 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;AYFQGLPVEVRGSNGAFYKGFVKDVHEDSVTIFFENNWQSERQIPFGDVRLPPPADYNKEITEGDEVEVYSRANEQEPCG WWLARVR(MSE)(MSE)KGDFYVIEYAACDATYNEIVTLERLRPVNPNPLATKGSF ; _entity_poly.pdbx_seq_one_letter_code_can ;AYFQGLPVEVRGSNGAFYKGFVKDVHEDSVTIFFENNWQSERQIPFGDVRLPPPADYNKEITEGDEVEVYSRANEQEPCG WWLARVRMMKGDFYVIEYAACDATYNEIVTLERLRPVNPNPLATKGSF ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 TYR n 1 3 PHE n 1 4 GLN n 1 5 GLY n 1 6 LEU n 1 7 PRO n 1 8 VAL n 1 9 GLU n 1 10 VAL n 1 11 ARG n 1 12 GLY n 1 13 SER n 1 14 ASN n 1 15 GLY n 1 16 ALA n 1 17 PHE n 1 18 TYR n 1 19 LYS n 1 20 GLY n 1 21 PHE n 1 22 VAL n 1 23 LYS n 1 24 ASP n 1 25 VAL n 1 26 HIS n 1 27 GLU n 1 28 ASP n 1 29 SER n 1 30 VAL n 1 31 THR n 1 32 ILE n 1 33 PHE n 1 34 PHE n 1 35 GLU n 1 36 ASN n 1 37 ASN n 1 38 TRP n 1 39 GLN n 1 40 SER n 1 41 GLU n 1 42 ARG n 1 43 GLN n 1 44 ILE n 1 45 PRO n 1 46 PHE n 1 47 GLY n 1 48 ASP n 1 49 VAL n 1 50 ARG n 1 51 LEU n 1 52 PRO n 1 53 PRO n 1 54 PRO n 1 55 ALA n 1 56 ASP n 1 57 TYR n 1 58 ASN n 1 59 LYS n 1 60 GLU n 1 61 ILE n 1 62 THR n 1 63 GLU n 1 64 GLY n 1 65 ASP n 1 66 GLU n 1 67 VAL n 1 68 GLU n 1 69 VAL n 1 70 TYR n 1 71 SER n 1 72 ARG n 1 73 ALA n 1 74 ASN n 1 75 GLU n 1 76 GLN n 1 77 GLU n 1 78 PRO n 1 79 CYS n 1 80 GLY n 1 81 TRP n 1 82 TRP n 1 83 LEU n 1 84 ALA n 1 85 ARG n 1 86 VAL n 1 87 ARG n 1 88 MSE n 1 89 MSE n 1 90 LYS n 1 91 GLY n 1 92 ASP n 1 93 PHE n 1 94 TYR n 1 95 VAL n 1 96 ILE n 1 97 GLU n 1 98 TYR n 1 99 ALA n 1 100 ALA n 1 101 CYS n 1 102 ASP n 1 103 ALA n 1 104 THR n 1 105 TYR n 1 106 ASN n 1 107 GLU n 1 108 ILE n 1 109 VAL n 1 110 THR n 1 111 LEU n 1 112 GLU n 1 113 ARG n 1 114 LEU n 1 115 ARG n 1 116 PRO n 1 117 VAL n 1 118 ASN n 1 119 PRO n 1 120 ASN n 1 121 PRO n 1 122 LEU n 1 123 ALA n 1 124 THR n 1 125 LYS n 1 126 GLY n 1 127 SER n 1 128 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'FXR2, FMR1L2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code FXR2_HUMAN _struct_ref.pdbx_db_accession P51116 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GLPVEVRGSNGAFYKGFVKDVHEDSVTIFFENNWQSERQIPFGDVRLPPPADYNKEITEGDEVEVYSRANEQEPCGWWLA RVRMMKGDFYVIEYAACDATYNEIVTLERLRPVNPNPLATKGSF ; _struct_ref.pdbx_align_begin 13 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3H8Z _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 128 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P51116 _struct_ref_seq.db_align_beg 13 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 136 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 14 _struct_ref_seq.pdbx_auth_seq_align_end 137 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3H8Z ALA A 1 ? UNP P51116 ? ? 'EXPRESSION TAG' 10 1 1 3H8Z TYR A 2 ? UNP P51116 ? ? 'EXPRESSION TAG' 11 2 1 3H8Z PHE A 3 ? UNP P51116 ? ? 'EXPRESSION TAG' 12 3 1 3H8Z GLN A 4 ? UNP P51116 ? ? 'EXPRESSION TAG' 13 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3H8Z _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.24 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 45.04 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details ;10 mg/ml protein in 20 mM Tris, pH 8.0, 200 mM NaCl, 1 mM DTT; Hanging drop vapour diffusion,20-30% Peg 3350, 0.2M MgCl2, Hepes 7.5., VAPOR DIFFUSION, HANGING DROP, temperature 298K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector ? _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date 2009-03-18 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97942 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97942 _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID # _reflns.entry_id 3H8Z _reflns.d_resolution_high 1.920 _reflns.d_resolution_low 100.000 _reflns.number_obs 10551 _reflns.pdbx_Rmerge_I_obs 0.090 _reflns.pdbx_netI_over_sigmaI 24.231 _reflns.pdbx_chi_squared 1.682 _reflns.pdbx_redundancy 6.100 _reflns.percent_possible_obs 99.000 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 1.92 1.96 ? ? ? 0.648 ? ? 1.073 2.50 ? 456 87.00 ? 1 1.96 2.00 ? ? ? 0.652 ? ? 1.265 3.00 ? 478 96.40 ? 2 2.00 2.04 ? ? ? 0.628 ? ? 1.149 3.70 ? 538 98.70 ? 3 2.04 2.08 ? ? ? 0.572 ? ? 1.928 5.10 ? 502 99.40 ? 4 2.08 2.12 ? ? ? 0.472 ? ? 1.250 6.00 ? 505 99.80 ? 5 2.12 2.17 ? ? ? 0.410 ? ? 1.486 6.20 ? 549 99.60 ? 6 2.17 2.23 ? ? ? 0.402 ? ? 1.573 6.40 ? 505 99.60 ? 7 2.23 2.29 ? ? ? 0.381 ? ? 1.878 6.50 ? 531 99.80 ? 8 2.29 2.36 ? ? ? 0.268 ? ? 1.362 6.80 ? 525 100.00 ? 9 2.36 2.43 ? ? ? 0.249 ? ? 1.600 6.90 ? 508 100.00 ? 10 2.43 2.52 ? ? ? 0.212 ? ? 1.460 7.00 ? 534 100.00 ? 11 2.52 2.62 ? ? ? 0.175 ? ? 1.262 7.00 ? 536 100.00 ? 12 2.62 2.74 ? ? ? 0.150 ? ? 1.254 7.00 ? 533 100.00 ? 13 2.74 2.88 ? ? ? 0.112 ? ? 1.280 7.00 ? 527 100.00 ? 14 2.88 3.06 ? ? ? 0.087 ? ? 1.199 7.00 ? 529 100.00 ? 15 3.06 3.30 ? ? ? 0.070 ? ? 1.322 6.90 ? 537 100.00 ? 16 3.30 3.63 ? ? ? 0.059 ? ? 1.546 6.80 ? 539 100.00 ? 17 3.63 4.16 ? ? ? 0.060 ? ? 2.219 6.70 ? 548 100.00 ? 18 4.16 5.24 ? ? ? 0.054 ? ? 2.171 6.50 ? 558 100.00 ? 19 5.24 100.00 ? ? ? 0.065 ? ? 4.406 6.00 ? 613 99.50 ? 20 # _refine.entry_id 3H8Z _refine.ls_d_res_high 1.920 _refine.ls_d_res_low 43.110 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 97.720 _refine.ls_number_reflns_obs 10430 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.212 _refine.ls_R_factor_R_work 0.210 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.250 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.800 _refine.ls_number_reflns_R_free 498 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 32.047 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -1.180 _refine.aniso_B[2][2] 1.880 _refine.aniso_B[3][3] -0.700 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.946 _refine.correlation_coeff_Fo_to_Fc_free 0.925 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.161 _refine.pdbx_overall_ESU_R_Free 0.151 _refine.overall_SU_ML 0.103 _refine.overall_SU_B 3.498 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 70.61 _refine.B_iso_min 16.57 _refine.occupancy_max 1.00 _refine.occupancy_min 0.50 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 873 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 63 _refine_hist.number_atoms_total 936 _refine_hist.d_res_high 1.920 _refine_hist.d_res_low 43.110 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 897 0.021 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1222 1.729 1.939 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 108 6.819 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 43 26.756 23.023 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 123 13.308 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 7 13.748 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 130 0.135 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 708 0.008 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 328 0.221 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 593 0.314 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 59 0.121 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 23 0.152 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 7 0.102 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 573 1.525 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 890 2.321 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 386 3.349 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 332 4.630 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.92 _refine_ls_shell.d_res_low 1.969 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 80.760 _refine_ls_shell.number_reflns_R_work 589 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.263 _refine_ls_shell.R_factor_R_free 0.336 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 28 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 617 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3H8Z _struct.title 'The Crystal Structure of the Tudor Domains from FXR2' _struct.pdbx_descriptor 'Fragile X mental retardation syndrome-related protein 2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3H8Z _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text ;Tudor domains, Fragile X mental retardation, FXR2, Structural Genomics, Structural Genomics Consortium, SGC, Phosphoprotein, RNA-binding, PROTEIN BINDING ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id THR _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 110 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id GLU _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 112 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id THR _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 119 _struct_conf.end_auth_comp_id GLU _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 121 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ARG 87 C ? ? ? 1_555 A MSE 88 N ? ? A ARG 96 A MSE 97 1_555 ? ? ? ? ? ? ? 1.323 ? covale2 covale ? ? A MSE 88 C ? ? ? 1_555 A MSE 89 N ? ? A MSE 97 A MSE 98 1_555 ? ? ? ? ? ? ? 1.316 ? covale3 covale ? ? A MSE 89 C ? ? ? 1_555 A LYS 90 N ? ? A MSE 98 A LYS 99 1_555 ? ? ? ? ? ? ? 1.324 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 42 ? PRO A 45 ? ARG A 51 PRO A 54 A 2 SER A 29 ? PHE A 34 ? SER A 38 PHE A 43 A 3 PHE A 17 ? VAL A 25 ? PHE A 26 VAL A 34 A 4 PRO A 7 ? ARG A 11 ? PRO A 16 ARG A 20 A 5 VAL A 49 ? ARG A 50 ? VAL A 58 ARG A 59 B 1 GLU A 107 ? VAL A 109 ? GLU A 116 VAL A 118 B 2 PHE A 93 ? TYR A 98 ? PHE A 102 TYR A 107 B 3 GLY A 80 ? LYS A 90 ? GLY A 89 LYS A 99 B 4 GLU A 66 ? SER A 71 ? GLU A 75 SER A 80 B 5 LEU A 114 ? PRO A 116 ? LEU A 123 PRO A 125 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ARG A 42 ? O ARG A 51 N ILE A 32 ? N ILE A 41 A 2 3 O THR A 31 ? O THR A 40 N LYS A 23 ? N LYS A 32 A 3 4 O TYR A 18 ? O TYR A 27 N VAL A 10 ? N VAL A 19 A 4 5 N GLU A 9 ? N GLU A 18 O ARG A 50 ? O ARG A 59 B 1 2 O GLU A 107 ? O GLU A 116 N ILE A 96 ? N ILE A 105 B 2 3 O VAL A 95 ? O VAL A 104 N MSE A 88 ? N MSE A 97 B 3 4 O ALA A 84 ? O ALA A 93 N VAL A 67 ? N VAL A 76 B 4 5 N GLU A 68 ? N GLU A 77 O ARG A 115 ? O ARG A 124 # _atom_sites.entry_id 3H8Z _atom_sites.fract_transf_matrix[1][1] 0.028933 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018290 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014251 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 10 10 ALA ALA A . n A 1 2 TYR 2 11 11 TYR TYR A . n A 1 3 PHE 3 12 12 PHE PHE A . n A 1 4 GLN 4 13 13 GLN GLN A . n A 1 5 GLY 5 14 14 GLY GLY A . n A 1 6 LEU 6 15 15 LEU LEU A . n A 1 7 PRO 7 16 16 PRO PRO A . n A 1 8 VAL 8 17 17 VAL VAL A . n A 1 9 GLU 9 18 18 GLU GLU A . n A 1 10 VAL 10 19 19 VAL VAL A . n A 1 11 ARG 11 20 20 ARG ARG A . n A 1 12 GLY 12 21 21 GLY GLY A . n A 1 13 SER 13 22 22 SER SER A . n A 1 14 ASN 14 23 23 ASN ASN A . n A 1 15 GLY 15 24 24 GLY GLY A . n A 1 16 ALA 16 25 25 ALA ALA A . n A 1 17 PHE 17 26 26 PHE PHE A . n A 1 18 TYR 18 27 27 TYR TYR A . n A 1 19 LYS 19 28 28 LYS LYS A . n A 1 20 GLY 20 29 29 GLY GLY A . n A 1 21 PHE 21 30 30 PHE PHE A . n A 1 22 VAL 22 31 31 VAL VAL A . n A 1 23 LYS 23 32 32 LYS LYS A . n A 1 24 ASP 24 33 33 ASP ASP A . n A 1 25 VAL 25 34 34 VAL VAL A . n A 1 26 HIS 26 35 35 HIS HIS A . n A 1 27 GLU 27 36 36 GLU GLU A . n A 1 28 ASP 28 37 37 ASP ASP A . n A 1 29 SER 29 38 38 SER SER A . n A 1 30 VAL 30 39 39 VAL VAL A . n A 1 31 THR 31 40 40 THR THR A . n A 1 32 ILE 32 41 41 ILE ILE A . n A 1 33 PHE 33 42 42 PHE PHE A . n A 1 34 PHE 34 43 43 PHE PHE A . n A 1 35 GLU 35 44 44 GLU GLU A . n A 1 36 ASN 36 45 45 ASN ASN A . n A 1 37 ASN 37 46 46 ASN ASN A . n A 1 38 TRP 38 47 47 TRP TRP A . n A 1 39 GLN 39 48 48 GLN GLN A . n A 1 40 SER 40 49 49 SER SER A . n A 1 41 GLU 41 50 50 GLU GLU A . n A 1 42 ARG 42 51 51 ARG ARG A . n A 1 43 GLN 43 52 52 GLN GLN A . n A 1 44 ILE 44 53 53 ILE ILE A . n A 1 45 PRO 45 54 54 PRO PRO A . n A 1 46 PHE 46 55 55 PHE PHE A . n A 1 47 GLY 47 56 56 GLY GLY A . n A 1 48 ASP 48 57 57 ASP ASP A . n A 1 49 VAL 49 58 58 VAL VAL A . n A 1 50 ARG 50 59 59 ARG ARG A . n A 1 51 LEU 51 60 60 LEU LEU A . n A 1 52 PRO 52 61 61 PRO PRO A . n A 1 53 PRO 53 62 62 PRO PRO A . n A 1 54 PRO 54 63 63 PRO PRO A . n A 1 55 ALA 55 64 64 ALA ALA A . n A 1 56 ASP 56 65 ? ? ? A . n A 1 57 TYR 57 66 ? ? ? A . n A 1 58 ASN 58 67 ? ? ? A . n A 1 59 LYS 59 68 ? ? ? A . n A 1 60 GLU 60 69 69 GLU GLU A . n A 1 61 ILE 61 70 70 ILE ILE A . n A 1 62 THR 62 71 71 THR THR A . n A 1 63 GLU 63 72 72 GLU GLU A . n A 1 64 GLY 64 73 73 GLY GLY A . n A 1 65 ASP 65 74 74 ASP ASP A . n A 1 66 GLU 66 75 75 GLU GLU A . n A 1 67 VAL 67 76 76 VAL VAL A . n A 1 68 GLU 68 77 77 GLU GLU A . n A 1 69 VAL 69 78 78 VAL VAL A . n A 1 70 TYR 70 79 79 TYR TYR A . n A 1 71 SER 71 80 80 SER SER A . n A 1 72 ARG 72 81 81 ARG ARG A . n A 1 73 ALA 73 82 82 ALA ALA A . n A 1 74 ASN 74 83 ? ? ? A . n A 1 75 GLU 75 84 ? ? ? A . n A 1 76 GLN 76 85 ? ? ? A . n A 1 77 GLU 77 86 86 GLU ALA A . n A 1 78 PRO 78 87 87 PRO PRO A . n A 1 79 CYS 79 88 88 CYS CYS A . n A 1 80 GLY 80 89 89 GLY GLY A . n A 1 81 TRP 81 90 90 TRP TRP A . n A 1 82 TRP 82 91 91 TRP TRP A . n A 1 83 LEU 83 92 92 LEU LEU A . n A 1 84 ALA 84 93 93 ALA ALA A . n A 1 85 ARG 85 94 94 ARG ARG A . n A 1 86 VAL 86 95 95 VAL VAL A . n A 1 87 ARG 87 96 96 ARG ARG A . n A 1 88 MSE 88 97 97 MSE MSE A . n A 1 89 MSE 89 98 98 MSE MSE A . n A 1 90 LYS 90 99 99 LYS LYS A . n A 1 91 GLY 91 100 100 GLY GLY A . n A 1 92 ASP 92 101 101 ASP ASP A . n A 1 93 PHE 93 102 102 PHE PHE A . n A 1 94 TYR 94 103 103 TYR TYR A . n A 1 95 VAL 95 104 104 VAL VAL A . n A 1 96 ILE 96 105 105 ILE ILE A . n A 1 97 GLU 97 106 106 GLU GLU A . n A 1 98 TYR 98 107 107 TYR TYR A . n A 1 99 ALA 99 108 108 ALA ALA A . n A 1 100 ALA 100 109 109 ALA ALA A . n A 1 101 CYS 101 110 110 CYS CYS A . n A 1 102 ASP 102 111 ? ? ? A . n A 1 103 ALA 103 112 ? ? ? A . n A 1 104 THR 104 113 ? ? ? A . n A 1 105 TYR 105 114 ? ? ? A . n A 1 106 ASN 106 115 115 ASN ASN A . n A 1 107 GLU 107 116 116 GLU GLU A . n A 1 108 ILE 108 117 117 ILE ILE A . n A 1 109 VAL 109 118 118 VAL VAL A . n A 1 110 THR 110 119 119 THR THR A . n A 1 111 LEU 111 120 120 LEU LEU A . n A 1 112 GLU 112 121 121 GLU GLU A . n A 1 113 ARG 113 122 122 ARG ARG A . n A 1 114 LEU 114 123 123 LEU LEU A . n A 1 115 ARG 115 124 124 ARG ARG A . n A 1 116 PRO 116 125 125 PRO PRO A . n A 1 117 VAL 117 126 126 VAL VAL A . n A 1 118 ASN 118 127 127 ASN ASN A . n A 1 119 PRO 119 128 128 PRO PRO A . n A 1 120 ASN 120 129 129 ASN ASN A . n A 1 121 PRO 121 130 130 PRO PRO A . n A 1 122 LEU 122 131 131 LEU LEU A . n A 1 123 ALA 123 132 132 ALA ALA A . n A 1 124 THR 124 133 ? ? ? A . n A 1 125 LYS 125 134 ? ? ? A . n A 1 126 GLY 126 135 ? ? ? A . n A 1 127 SER 127 136 ? ? ? A . n A 1 128 PHE 128 137 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 1 1 HOH HOH A . B 2 HOH 2 2 2 HOH HOH A . B 2 HOH 3 3 3 HOH HOH A . B 2 HOH 4 4 4 HOH HOH A . B 2 HOH 5 5 5 HOH HOH A . B 2 HOH 6 6 6 HOH HOH A . B 2 HOH 7 7 7 HOH HOH A . B 2 HOH 8 8 8 HOH HOH A . B 2 HOH 9 9 9 HOH HOH A . B 2 HOH 10 138 10 HOH HOH A . B 2 HOH 11 139 11 HOH HOH A . B 2 HOH 12 140 12 HOH HOH A . B 2 HOH 13 141 13 HOH HOH A . B 2 HOH 14 142 14 HOH HOH A . B 2 HOH 15 143 15 HOH HOH A . B 2 HOH 16 144 16 HOH HOH A . B 2 HOH 17 145 17 HOH HOH A . B 2 HOH 18 146 18 HOH HOH A . B 2 HOH 19 147 19 HOH HOH A . B 2 HOH 20 148 20 HOH HOH A . B 2 HOH 21 149 22 HOH HOH A . B 2 HOH 22 150 23 HOH HOH A . B 2 HOH 23 151 24 HOH HOH A . B 2 HOH 24 152 26 HOH HOH A . B 2 HOH 25 153 27 HOH HOH A . B 2 HOH 26 154 28 HOH HOH A . B 2 HOH 27 155 29 HOH HOH A . B 2 HOH 28 156 30 HOH HOH A . B 2 HOH 29 157 31 HOH HOH A . B 2 HOH 30 158 33 HOH HOH A . B 2 HOH 31 159 34 HOH HOH A . B 2 HOH 32 160 35 HOH HOH A . B 2 HOH 33 161 36 HOH HOH A . B 2 HOH 34 162 37 HOH HOH A . B 2 HOH 35 163 38 HOH HOH A . B 2 HOH 36 164 39 HOH HOH A . B 2 HOH 37 165 40 HOH HOH A . B 2 HOH 38 166 41 HOH HOH A . B 2 HOH 39 167 42 HOH HOH A . B 2 HOH 40 168 43 HOH HOH A . B 2 HOH 41 169 44 HOH HOH A . B 2 HOH 42 170 45 HOH HOH A . B 2 HOH 43 171 46 HOH HOH A . B 2 HOH 44 172 47 HOH HOH A . B 2 HOH 45 173 48 HOH HOH A . B 2 HOH 46 174 49 HOH HOH A . B 2 HOH 47 175 50 HOH HOH A . B 2 HOH 48 176 51 HOH HOH A . B 2 HOH 49 177 52 HOH HOH A . B 2 HOH 50 178 53 HOH HOH A . B 2 HOH 51 179 54 HOH HOH A . B 2 HOH 52 180 55 HOH HOH A . B 2 HOH 53 181 56 HOH HOH A . B 2 HOH 54 182 57 HOH HOH A . B 2 HOH 55 183 58 HOH HOH A . B 2 HOH 56 184 61 HOH HOH A . B 2 HOH 57 185 62 HOH HOH A . B 2 HOH 58 186 63 HOH HOH A . B 2 HOH 59 187 64 HOH HOH A . B 2 HOH 60 188 65 HOH HOH A . B 2 HOH 61 189 66 HOH HOH A . B 2 HOH 62 190 67 HOH HOH A . B 2 HOH 63 191 72 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 88 A MSE 97 ? MET SELENOMETHIONINE 2 A MSE 89 A MSE 98 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-06-16 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 REFMAC 5.2.0019 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 36 ? CG ? A GLU 27 CG 2 1 Y 1 A GLU 36 ? CD ? A GLU 27 CD 3 1 Y 1 A GLU 36 ? OE1 ? A GLU 27 OE1 4 1 Y 1 A GLU 36 ? OE2 ? A GLU 27 OE2 5 1 Y 1 A ASP 37 ? CG ? A ASP 28 CG 6 1 Y 1 A ASP 37 ? OD1 ? A ASP 28 OD1 7 1 Y 1 A ASP 37 ? OD2 ? A ASP 28 OD2 8 1 Y 1 A GLU 75 ? CG ? A GLU 66 CG 9 1 Y 1 A GLU 75 ? CD ? A GLU 66 CD 10 1 Y 1 A GLU 75 ? OE1 ? A GLU 66 OE1 11 1 Y 1 A GLU 75 ? OE2 ? A GLU 66 OE2 12 1 Y 1 A GLU 86 ? CG ? A GLU 77 CG 13 1 Y 1 A GLU 86 ? CD ? A GLU 77 CD 14 1 Y 1 A GLU 86 ? OE1 ? A GLU 77 OE1 15 1 Y 1 A GLU 86 ? OE2 ? A GLU 77 OE2 16 1 Y 1 A ARG 94 ? CG ? A ARG 85 CG 17 1 Y 1 A ARG 94 ? CD ? A ARG 85 CD 18 1 Y 1 A ARG 94 ? NE ? A ARG 85 NE 19 1 Y 1 A ARG 94 ? CZ ? A ARG 85 CZ 20 1 Y 1 A ARG 94 ? NH1 ? A ARG 85 NH1 21 1 Y 1 A ARG 94 ? NH2 ? A ARG 85 NH2 22 1 Y 1 A LYS 99 ? CG ? A LYS 90 CG 23 1 Y 1 A LYS 99 ? CD ? A LYS 90 CD 24 1 Y 1 A LYS 99 ? CE ? A LYS 90 CE 25 1 Y 1 A LYS 99 ? NZ ? A LYS 90 NZ 26 1 Y 1 A GLU 106 ? CG ? A GLU 97 CG 27 1 Y 1 A GLU 106 ? CD ? A GLU 97 CD 28 1 Y 1 A GLU 106 ? OE1 ? A GLU 97 OE1 29 1 Y 1 A GLU 106 ? OE2 ? A GLU 97 OE2 30 1 Y 1 A CYS 110 ? SG ? A CYS 101 SG 31 1 Y 1 A GLU 121 ? CG ? A GLU 112 CG 32 1 Y 1 A GLU 121 ? CD ? A GLU 112 CD 33 1 Y 1 A GLU 121 ? OE1 ? A GLU 112 OE1 34 1 Y 1 A GLU 121 ? OE2 ? A GLU 112 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP 65 ? A ASP 56 2 1 Y 1 A TYR 66 ? A TYR 57 3 1 Y 1 A ASN 67 ? A ASN 58 4 1 Y 1 A LYS 68 ? A LYS 59 5 1 Y 1 A ASN 83 ? A ASN 74 6 1 Y 1 A GLU 84 ? A GLU 75 7 1 Y 1 A GLN 85 ? A GLN 76 8 1 Y 1 A ASP 111 ? A ASP 102 9 1 Y 1 A ALA 112 ? A ALA 103 10 1 Y 1 A THR 113 ? A THR 104 11 1 Y 1 A TYR 114 ? A TYR 105 12 1 Y 1 A THR 133 ? A THR 124 13 1 Y 1 A LYS 134 ? A LYS 125 14 1 Y 1 A GLY 135 ? A GLY 126 15 1 Y 1 A SER 136 ? A SER 127 16 1 Y 1 A PHE 137 ? A PHE 128 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #