data_3H9V # _entry.id 3H9V # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.350 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3H9V pdb_00003h9v 10.2210/pdb3h9v/pdb RCSB RCSB052874 ? ? WWPDB D_1000052874 ? ? # _pdbx_database_status.entry_id 3H9V _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-04-30 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kawate, T.' 1 'Michel, J.C.' 2 'Gouaux, E.' 3 # _citation.id primary _citation.title 'Crystal structure of the ATP-gated P2X(4) ion channel in the closed state.' _citation.journal_abbrev Nature _citation.journal_volume 460 _citation.page_first 592 _citation.page_last 598 _citation.year 2009 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19641588 _citation.pdbx_database_id_DOI 10.1038/nature08198 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kawate, T.' 1 ? primary 'Michel, J.C.' 2 ? primary 'Birdsong, W.T.' 3 ? primary 'Gouaux, E.' 4 ? # _cell.entry_id 3H9V _cell.length_a 100.836 _cell.length_b 100.836 _cell.length_c 431.316 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3H9V _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'P2X purinoceptor' 40297.004 1 ? C51F,N78K,N187R,H252R 'UNP residues 28-381' ? 2 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 2 ? ? ? ? 3 non-polymer syn 'GADOLINIUM ATOM' 157.250 2 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSKKVGTLNRFTQALVIAYVIGYVFVYNKGYQDTDTVLSSVTTKVKGIALTKTSELGERIWDVADYIIPPQEDGSFFVL TNMIITTNQTQSKCAENPTPASTCTSHRDCKRGFNDARGDGVRTGRCVSYSASVKTCEVLSWCPLEKIVDPPNPPLLADA ERFTVLIKNNIRYPKFNFNKRNILPNINSSYLTHCVFSRKTDPDCPIFRLGDIVGEAEEDFQIMAVRGGVMGVQIRWDCD LDMPQSWCVPRYTFRRLDNKDPDNNVAPGYNFRFAKYYKNSDGTETRTLIKGYGIRFDVMVFGQAGKFNIIPTLLNIGAG LALLGLVNVICDWIVLTFMKRKQHYKEQKYTYVDDF ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSKKVGTLNRFTQALVIAYVIGYVFVYNKGYQDTDTVLSSVTTKVKGIALTKTSELGERIWDVADYIIPPQEDGSFFVL TNMIITTNQTQSKCAENPTPASTCTSHRDCKRGFNDARGDGVRTGRCVSYSASVKTCEVLSWCPLEKIVDPPNPPLLADA ERFTVLIKNNIRYPKFNFNKRNILPNINSSYLTHCVFSRKTDPDCPIFRLGDIVGEAEEDFQIMAVRGGVMGVQIRWDCD LDMPQSWCVPRYTFRRLDNKDPDNNVAPGYNFRFAKYYKNSDGTETRTLIKGYGIRFDVMVFGQAGKFNIIPTLLNIGAG LALLGLVNVICDWIVLTFMKRKQHYKEQKYTYVDDF ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 LYS n 1 5 LYS n 1 6 VAL n 1 7 GLY n 1 8 THR n 1 9 LEU n 1 10 ASN n 1 11 ARG n 1 12 PHE n 1 13 THR n 1 14 GLN n 1 15 ALA n 1 16 LEU n 1 17 VAL n 1 18 ILE n 1 19 ALA n 1 20 TYR n 1 21 VAL n 1 22 ILE n 1 23 GLY n 1 24 TYR n 1 25 VAL n 1 26 PHE n 1 27 VAL n 1 28 TYR n 1 29 ASN n 1 30 LYS n 1 31 GLY n 1 32 TYR n 1 33 GLN n 1 34 ASP n 1 35 THR n 1 36 ASP n 1 37 THR n 1 38 VAL n 1 39 LEU n 1 40 SER n 1 41 SER n 1 42 VAL n 1 43 THR n 1 44 THR n 1 45 LYS n 1 46 VAL n 1 47 LYS n 1 48 GLY n 1 49 ILE n 1 50 ALA n 1 51 LEU n 1 52 THR n 1 53 LYS n 1 54 THR n 1 55 SER n 1 56 GLU n 1 57 LEU n 1 58 GLY n 1 59 GLU n 1 60 ARG n 1 61 ILE n 1 62 TRP n 1 63 ASP n 1 64 VAL n 1 65 ALA n 1 66 ASP n 1 67 TYR n 1 68 ILE n 1 69 ILE n 1 70 PRO n 1 71 PRO n 1 72 GLN n 1 73 GLU n 1 74 ASP n 1 75 GLY n 1 76 SER n 1 77 PHE n 1 78 PHE n 1 79 VAL n 1 80 LEU n 1 81 THR n 1 82 ASN n 1 83 MET n 1 84 ILE n 1 85 ILE n 1 86 THR n 1 87 THR n 1 88 ASN n 1 89 GLN n 1 90 THR n 1 91 GLN n 1 92 SER n 1 93 LYS n 1 94 CYS n 1 95 ALA n 1 96 GLU n 1 97 ASN n 1 98 PRO n 1 99 THR n 1 100 PRO n 1 101 ALA n 1 102 SER n 1 103 THR n 1 104 CYS n 1 105 THR n 1 106 SER n 1 107 HIS n 1 108 ARG n 1 109 ASP n 1 110 CYS n 1 111 LYS n 1 112 ARG n 1 113 GLY n 1 114 PHE n 1 115 ASN n 1 116 ASP n 1 117 ALA n 1 118 ARG n 1 119 GLY n 1 120 ASP n 1 121 GLY n 1 122 VAL n 1 123 ARG n 1 124 THR n 1 125 GLY n 1 126 ARG n 1 127 CYS n 1 128 VAL n 1 129 SER n 1 130 TYR n 1 131 SER n 1 132 ALA n 1 133 SER n 1 134 VAL n 1 135 LYS n 1 136 THR n 1 137 CYS n 1 138 GLU n 1 139 VAL n 1 140 LEU n 1 141 SER n 1 142 TRP n 1 143 CYS n 1 144 PRO n 1 145 LEU n 1 146 GLU n 1 147 LYS n 1 148 ILE n 1 149 VAL n 1 150 ASP n 1 151 PRO n 1 152 PRO n 1 153 ASN n 1 154 PRO n 1 155 PRO n 1 156 LEU n 1 157 LEU n 1 158 ALA n 1 159 ASP n 1 160 ALA n 1 161 GLU n 1 162 ARG n 1 163 PHE n 1 164 THR n 1 165 VAL n 1 166 LEU n 1 167 ILE n 1 168 LYS n 1 169 ASN n 1 170 ASN n 1 171 ILE n 1 172 ARG n 1 173 TYR n 1 174 PRO n 1 175 LYS n 1 176 PHE n 1 177 ASN n 1 178 PHE n 1 179 ASN n 1 180 LYS n 1 181 ARG n 1 182 ASN n 1 183 ILE n 1 184 LEU n 1 185 PRO n 1 186 ASN n 1 187 ILE n 1 188 ASN n 1 189 SER n 1 190 SER n 1 191 TYR n 1 192 LEU n 1 193 THR n 1 194 HIS n 1 195 CYS n 1 196 VAL n 1 197 PHE n 1 198 SER n 1 199 ARG n 1 200 LYS n 1 201 THR n 1 202 ASP n 1 203 PRO n 1 204 ASP n 1 205 CYS n 1 206 PRO n 1 207 ILE n 1 208 PHE n 1 209 ARG n 1 210 LEU n 1 211 GLY n 1 212 ASP n 1 213 ILE n 1 214 VAL n 1 215 GLY n 1 216 GLU n 1 217 ALA n 1 218 GLU n 1 219 GLU n 1 220 ASP n 1 221 PHE n 1 222 GLN n 1 223 ILE n 1 224 MET n 1 225 ALA n 1 226 VAL n 1 227 ARG n 1 228 GLY n 1 229 GLY n 1 230 VAL n 1 231 MET n 1 232 GLY n 1 233 VAL n 1 234 GLN n 1 235 ILE n 1 236 ARG n 1 237 TRP n 1 238 ASP n 1 239 CYS n 1 240 ASP n 1 241 LEU n 1 242 ASP n 1 243 MET n 1 244 PRO n 1 245 GLN n 1 246 SER n 1 247 TRP n 1 248 CYS n 1 249 VAL n 1 250 PRO n 1 251 ARG n 1 252 TYR n 1 253 THR n 1 254 PHE n 1 255 ARG n 1 256 ARG n 1 257 LEU n 1 258 ASP n 1 259 ASN n 1 260 LYS n 1 261 ASP n 1 262 PRO n 1 263 ASP n 1 264 ASN n 1 265 ASN n 1 266 VAL n 1 267 ALA n 1 268 PRO n 1 269 GLY n 1 270 TYR n 1 271 ASN n 1 272 PHE n 1 273 ARG n 1 274 PHE n 1 275 ALA n 1 276 LYS n 1 277 TYR n 1 278 TYR n 1 279 LYS n 1 280 ASN n 1 281 SER n 1 282 ASP n 1 283 GLY n 1 284 THR n 1 285 GLU n 1 286 THR n 1 287 ARG n 1 288 THR n 1 289 LEU n 1 290 ILE n 1 291 LYS n 1 292 GLY n 1 293 TYR n 1 294 GLY n 1 295 ILE n 1 296 ARG n 1 297 PHE n 1 298 ASP n 1 299 VAL n 1 300 MET n 1 301 VAL n 1 302 PHE n 1 303 GLY n 1 304 GLN n 1 305 ALA n 1 306 GLY n 1 307 LYS n 1 308 PHE n 1 309 ASN n 1 310 ILE n 1 311 ILE n 1 312 PRO n 1 313 THR n 1 314 LEU n 1 315 LEU n 1 316 ASN n 1 317 ILE n 1 318 GLY n 1 319 ALA n 1 320 GLY n 1 321 LEU n 1 322 ALA n 1 323 LEU n 1 324 LEU n 1 325 GLY n 1 326 LEU n 1 327 VAL n 1 328 ASN n 1 329 VAL n 1 330 ILE n 1 331 CYS n 1 332 ASP n 1 333 TRP n 1 334 ILE n 1 335 VAL n 1 336 LEU n 1 337 THR n 1 338 PHE n 1 339 MET n 1 340 LYS n 1 341 ARG n 1 342 LYS n 1 343 GLN n 1 344 HIS n 1 345 TYR n 1 346 LYS n 1 347 GLU n 1 348 GLN n 1 349 LYS n 1 350 TYR n 1 351 THR n 1 352 TYR n 1 353 VAL n 1 354 ASP n 1 355 ASP n 1 356 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'leopard danio,zebra danio,zebra fish' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'p2rx4a, P2X4.1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Danio rerio' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 7955 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name 'fall armyworm' _entity_src_gen.pdbx_host_org_scientific_name 'Spodoptera frugiperda' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain Sf9 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type bacmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pFastBac _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q6NYR1_DANRE _struct_ref.pdbx_db_accession Q6NYR1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SKKVGTLNRFTQALVIAYVIGYVCVYNKGYQDTDTVLSSVTTKVKGIALTNTSELGERIWDVADYIIPPQEDGSFFVLTN MIITTNQTQSKCAENPTPASTCTSHRDCKRGFNDARGDGVRTGRCVSYSASVKTCEVLSWCPLEKIVDPPNPPLLADAEN FTVLIKNNIRYPKFNFNKRNILPNINSSYLTHCVFSRKTDPDCPIFRLGDIVGEAEEDFQIMAVHGGVMGVQIRWDCDLD MPQSWCVPRYTFRRLDNKDPDNNVAPGYNFRFAKYYKNSDGTETRTLIKGYGIRFDVMVFGQAGKFNIIPTLLNIGAGLA LLGLVNVICDWIVLTFMKRKQHYKEQKYTYVDDF ; _struct_ref.pdbx_align_begin 28 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3H9V _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 356 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q6NYR1 _struct_ref_seq.db_align_beg 28 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 381 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 28 _struct_ref_seq.pdbx_auth_seq_align_end 381 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3H9V GLY A 1 ? UNP Q6NYR1 ? ? 'expression tag' 26 1 1 3H9V SER A 2 ? UNP Q6NYR1 ? ? 'expression tag' 27 2 1 3H9V PHE A 26 ? UNP Q6NYR1 CYS 51 'engineered mutation' 51 3 1 3H9V LYS A 53 ? UNP Q6NYR1 ASN 78 'engineered mutation' 78 4 1 3H9V ARG A 162 ? UNP Q6NYR1 ASN 187 'engineered mutation' 187 5 1 3H9V ARG A 227 ? UNP Q6NYR1 HIS 252 'engineered mutation' 252 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GD non-polymer . 'GADOLINIUM ATOM' ? Gd 157.250 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3H9V _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 5.24 _exptl_crystal.density_percent_sol 76.51 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.4 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '20% PEG 2,000, 300mM Mg(NO3)2, and 100mM Tris pH 8.4, and 1mM GdCl3, vapor diffusion, temperature 277K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date 2009-03-26 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 24-ID-E _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3H9V _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 3.09 _reflns.number_obs 14414 _reflns.number_all ? _reflns.percent_possible_obs 90.1 _reflns.pdbx_Rmerge_I_obs 0.080 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 18.2 _reflns.B_iso_Wilson_estimate 97.2 _reflns.pdbx_redundancy 3.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 3.09 _reflns_shell.d_res_low 3.20 _reflns_shell.percent_possible_all 69.9 _reflns_shell.Rmerge_I_obs 0.484 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.8 _reflns_shell.pdbx_redundancy 2.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3H9V _refine.ls_number_reflns_obs 14372 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.33 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 29.109 _refine.ls_d_res_high 3.100 _refine.ls_percent_reflns_obs 90.74 _refine.ls_R_factor_obs 0.2494 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2479 _refine.ls_R_factor_R_free 0.2782 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.07 _refine.ls_number_reflns_R_free 729 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 0.79 _refine.occupancy_max 1.00 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 103.646 _refine.aniso_B[1][1] -28.240 _refine.aniso_B[2][2] -28.240 _refine.aniso_B[3][3] 56.480 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.260 _refine.solvent_model_param_bsol 65.839 _refine.pdbx_solvent_vdw_probe_radii 0.80 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 1.00 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.46 _refine.pdbx_overall_phase_error 33.41 _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2443 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 58 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2501 _refine_hist.d_res_high 3.100 _refine_hist.d_res_low 29.109 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.008 ? ? 2562 'X-RAY DIFFRACTION' ? f_angle_d 1.483 ? ? 3499 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 21.766 ? ? 1548 'X-RAY DIFFRACTION' ? f_chiral_restr 0.091 ? ? 410 'X-RAY DIFFRACTION' ? f_plane_restr 0.005 ? ? 448 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 3.100 3.3393 2465 0.3281 84.00 0.3933 . . 131 . . . . 'X-RAY DIFFRACTION' . 3.3393 3.6748 2750 0.2590 94.00 0.3149 . . 167 . . . . 'X-RAY DIFFRACTION' . 3.6748 4.2052 2816 0.2362 94.00 0.2685 . . 149 . . . . 'X-RAY DIFFRACTION' . 4.2052 5.2929 2794 0.2013 93.00 0.2489 . . 154 . . . . 'X-RAY DIFFRACTION' . 5.2929 29.1101 2818 0.2596 89.00 0.2689 . . 128 . . . . # _struct.entry_id 3H9V _struct.title 'Crystal structure of the ATP-gated P2X4 ion channel in the closed, apo state at 3.1 Angstroms' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3H9V _struct_keywords.text ;P2X, Purinergic receptor, ion channel, closed state, apo state, Ion transport, Ionic channel, Receptor, Transmembrane, Transport, TRANSPORT PROTEIN ; _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 7 ? ILE A 22 ? GLY A 32 ILE A 47 1 ? 16 HELX_P HELX_P2 2 ASN A 115 ? GLY A 119 ? ASN A 140 GLY A 144 5 ? 5 HELX_P HELX_P3 3 LEU A 157 ? ARG A 162 ? LEU A 182 ARG A 187 5 ? 6 HELX_P HELX_P4 4 SER A 190 ? HIS A 194 ? SER A 215 HIS A 219 5 ? 5 HELX_P HELX_P5 5 LEU A 210 ? ALA A 217 ? LEU A 235 ALA A 242 1 ? 8 HELX_P HELX_P6 6 ASP A 220 ? VAL A 226 ? ASP A 245 VAL A 251 1 ? 7 HELX_P HELX_P7 7 ASN A 309 ? VAL A 335 ? ASN A 334 VAL A 360 1 ? 27 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 94 SG ? ? ? 1_555 A CYS 143 SG ? ? A CYS 119 A CYS 168 1_555 ? ? ? ? ? ? ? 2.044 ? ? disulf2 disulf ? ? A CYS 104 SG ? ? ? 1_555 A CYS 127 SG ? ? A CYS 129 A CYS 152 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf3 disulf ? ? A CYS 110 SG ? ? ? 1_555 A CYS 137 SG ? ? A CYS 135 A CYS 162 1_555 ? ? ? ? ? ? ? 2.040 ? ? disulf4 disulf ? ? A CYS 195 SG ? ? ? 1_555 A CYS 205 SG ? ? A CYS 220 A CYS 230 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf5 disulf ? ? A CYS 239 SG ? ? ? 1_555 A CYS 248 SG ? ? A CYS 264 A CYS 273 1_555 ? ? ? ? ? ? ? 2.056 ? ? covale1 covale one ? A ASN 88 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 113 B NAG 1 1_555 ? ? ? ? ? ? ? 1.447 ? N-Glycosylation covale2 covale one ? A ASN 188 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 213 C NAG 1 1_555 ? ? ? ? ? ? ? 1.433 ? N-Glycosylation covale3 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.503 ? ? covale4 covale both ? C NAG . O4 ? ? ? 1_555 C NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.442 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 PRO 70 A . ? PRO 95 A PRO 71 A ? PRO 96 A 1 -11.77 2 CYS 143 A . ? CYS 168 A PRO 144 A ? PRO 169 A 1 -0.81 3 ASN 153 A . ? ASN 178 A PRO 154 A ? PRO 179 A 1 3.97 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 3 ? C ? 2 ? D ? 4 ? E ? 4 ? F ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? parallel E 1 2 ? anti-parallel E 2 3 ? parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 39 ? LYS A 47 ? LEU A 64 LYS A 72 A 2 THR A 164 ? TYR A 173 ? THR A 189 TYR A 198 A 3 PHE A 178 ? ARG A 181 ? PHE A 203 ARG A 206 B 1 LEU A 39 ? LYS A 47 ? LEU A 64 LYS A 72 B 2 THR A 164 ? TYR A 173 ? THR A 189 TYR A 198 B 3 ILE A 207 ? ARG A 209 ? ILE A 232 ARG A 234 C 1 ILE A 49 ? THR A 54 ? ILE A 74 THR A 79 C 2 GLY A 58 ? ASP A 63 ? GLY A 83 ASP A 88 D 1 PHE A 77 ? GLN A 89 ? PHE A 102 GLN A 114 D 2 GLU A 285 ? PHE A 302 ? GLU A 310 PHE A 327 D 3 GLY A 229 ? ASP A 240 ? GLY A 254 ASP A 265 D 4 ASN A 271 ? LYS A 279 ? ASN A 296 LYS A 304 E 1 VAL A 249 ? ARG A 256 ? VAL A 274 ARG A 281 E 2 GLY A 229 ? ASP A 240 ? GLY A 254 ASP A 265 E 3 GLU A 285 ? PHE A 302 ? GLU A 310 PHE A 327 E 4 ALA A 305 ? GLY A 306 ? ALA A 330 GLY A 331 F 1 SER A 92 ? ALA A 95 ? SER A 117 ALA A 120 F 2 THR A 136 ? SER A 141 ? THR A 161 SER A 166 F 3 VAL A 122 ? VAL A 128 ? VAL A 147 VAL A 153 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 39 ? N LEU A 64 O ARG A 172 ? O ARG A 197 A 2 3 N TYR A 173 ? N TYR A 198 O PHE A 178 ? O PHE A 203 B 1 2 N LEU A 39 ? N LEU A 64 O ARG A 172 ? O ARG A 197 B 2 3 N VAL A 165 ? N VAL A 190 O PHE A 208 ? O PHE A 233 C 1 2 N THR A 52 ? N THR A 77 O ARG A 60 ? O ARG A 85 D 1 2 N PHE A 77 ? N PHE A 102 O PHE A 297 ? O PHE A 322 D 2 3 O ASP A 298 ? O ASP A 323 N VAL A 233 ? N VAL A 258 E 1 2 O ARG A 255 ? O ARG A 280 N GLY A 232 ? N GLY A 257 E 2 3 N VAL A 233 ? N VAL A 258 O ASP A 298 ? O ASP A 323 F 1 2 N SER A 92 ? N SER A 117 O SER A 141 ? O SER A 166 F 2 3 O THR A 136 ? O THR A 161 N VAL A 128 ? N VAL A 153 # _atom_sites.entry_id 3H9V _atom_sites.fract_transf_matrix[1][1] 0.009917 _atom_sites.fract_transf_matrix[1][2] 0.005726 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011451 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.002318 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C GD N O S # loop_ _database_PDB_caveat.id _database_PDB_caveat.text 1 'NAG B 1 HAS WRONG CHIRALITY AT ATOM C1' 2 'NAG B 2 HAS WRONG CHIRALITY AT ATOM C1' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 26 ? ? ? A . n A 1 2 SER 2 27 ? ? ? A . n A 1 3 SER 3 28 ? ? ? A . n A 1 4 LYS 4 29 ? ? ? A . n A 1 5 LYS 5 30 ? ? ? A . n A 1 6 VAL 6 31 ? ? ? A . n A 1 7 GLY 7 32 32 GLY GLY A . n A 1 8 THR 8 33 33 THR THR A . n A 1 9 LEU 9 34 34 LEU LEU A . n A 1 10 ASN 10 35 35 ASN ASN A . n A 1 11 ARG 11 36 36 ARG ARG A . n A 1 12 PHE 12 37 37 PHE PHE A . n A 1 13 THR 13 38 38 THR THR A . n A 1 14 GLN 14 39 39 GLN GLN A . n A 1 15 ALA 15 40 40 ALA ALA A . n A 1 16 LEU 16 41 41 LEU LEU A . n A 1 17 VAL 17 42 42 VAL VAL A . n A 1 18 ILE 18 43 43 ILE ILE A . n A 1 19 ALA 19 44 44 ALA ALA A . n A 1 20 TYR 20 45 45 TYR TYR A . n A 1 21 VAL 21 46 46 VAL VAL A . n A 1 22 ILE 22 47 47 ILE ILE A . n A 1 23 GLY 23 48 48 GLY GLY A . n A 1 24 TYR 24 49 49 TYR TYR A . n A 1 25 VAL 25 50 50 VAL VAL A . n A 1 26 PHE 26 51 51 PHE PHE A . n A 1 27 VAL 27 52 52 VAL VAL A . n A 1 28 TYR 28 53 53 TYR TYR A . n A 1 29 ASN 29 54 54 ASN ASN A . n A 1 30 LYS 30 55 55 LYS LYS A . n A 1 31 GLY 31 56 56 GLY GLY A . n A 1 32 TYR 32 57 57 TYR TYR A . n A 1 33 GLN 33 58 58 GLN GLN A . n A 1 34 ASP 34 59 59 ASP ASP A . n A 1 35 THR 35 60 60 THR THR A . n A 1 36 ASP 36 61 61 ASP ASP A . n A 1 37 THR 37 62 62 THR THR A . n A 1 38 VAL 38 63 63 VAL VAL A . n A 1 39 LEU 39 64 64 LEU LEU A . n A 1 40 SER 40 65 65 SER SER A . n A 1 41 SER 41 66 66 SER SER A . n A 1 42 VAL 42 67 67 VAL VAL A . n A 1 43 THR 43 68 68 THR THR A . n A 1 44 THR 44 69 69 THR THR A . n A 1 45 LYS 45 70 70 LYS LYS A . n A 1 46 VAL 46 71 71 VAL VAL A . n A 1 47 LYS 47 72 72 LYS LYS A . n A 1 48 GLY 48 73 73 GLY GLY A . n A 1 49 ILE 49 74 74 ILE ILE A . n A 1 50 ALA 50 75 75 ALA ALA A . n A 1 51 LEU 51 76 76 LEU LEU A . n A 1 52 THR 52 77 77 THR THR A . n A 1 53 LYS 53 78 78 LYS LYS A . n A 1 54 THR 54 79 79 THR THR A . n A 1 55 SER 55 80 80 SER SER A . n A 1 56 GLU 56 81 81 GLU GLU A . n A 1 57 LEU 57 82 82 LEU LEU A . n A 1 58 GLY 58 83 83 GLY GLY A . n A 1 59 GLU 59 84 84 GLU GLU A . n A 1 60 ARG 60 85 85 ARG ARG A . n A 1 61 ILE 61 86 86 ILE ILE A . n A 1 62 TRP 62 87 87 TRP TRP A . n A 1 63 ASP 63 88 88 ASP ASP A . n A 1 64 VAL 64 89 89 VAL VAL A . n A 1 65 ALA 65 90 90 ALA ALA A . n A 1 66 ASP 66 91 91 ASP ASP A . n A 1 67 TYR 67 92 92 TYR TYR A . n A 1 68 ILE 68 93 93 ILE ILE A . n A 1 69 ILE 69 94 94 ILE ILE A . n A 1 70 PRO 70 95 95 PRO PRO A . n A 1 71 PRO 71 96 96 PRO PRO A . n A 1 72 GLN 72 97 97 GLN GLN A . n A 1 73 GLU 73 98 98 GLU GLU A . n A 1 74 ASP 74 99 99 ASP ASP A . n A 1 75 GLY 75 100 100 GLY GLY A . n A 1 76 SER 76 101 101 SER SER A . n A 1 77 PHE 77 102 102 PHE PHE A . n A 1 78 PHE 78 103 103 PHE PHE A . n A 1 79 VAL 79 104 104 VAL VAL A . n A 1 80 LEU 80 105 105 LEU LEU A . n A 1 81 THR 81 106 106 THR THR A . n A 1 82 ASN 82 107 107 ASN ASN A . n A 1 83 MET 83 108 108 MET MET A . n A 1 84 ILE 84 109 109 ILE ILE A . n A 1 85 ILE 85 110 110 ILE ILE A . n A 1 86 THR 86 111 111 THR THR A . n A 1 87 THR 87 112 112 THR THR A . n A 1 88 ASN 88 113 113 ASN ASN A . n A 1 89 GLN 89 114 114 GLN GLN A . n A 1 90 THR 90 115 115 THR THR A . n A 1 91 GLN 91 116 116 GLN GLN A . n A 1 92 SER 92 117 117 SER SER A . n A 1 93 LYS 93 118 118 LYS LYS A . n A 1 94 CYS 94 119 119 CYS CYS A . n A 1 95 ALA 95 120 120 ALA ALA A . n A 1 96 GLU 96 121 121 GLU GLU A . n A 1 97 ASN 97 122 122 ASN ASN A . n A 1 98 PRO 98 123 123 PRO PRO A . n A 1 99 THR 99 124 124 THR THR A . n A 1 100 PRO 100 125 125 PRO PRO A . n A 1 101 ALA 101 126 126 ALA ALA A . n A 1 102 SER 102 127 127 SER SER A . n A 1 103 THR 103 128 128 THR THR A . n A 1 104 CYS 104 129 129 CYS CYS A . n A 1 105 THR 105 130 130 THR THR A . n A 1 106 SER 106 131 131 SER SER A . n A 1 107 HIS 107 132 132 HIS HIS A . n A 1 108 ARG 108 133 133 ARG ARG A . n A 1 109 ASP 109 134 134 ASP ASP A . n A 1 110 CYS 110 135 135 CYS CYS A . n A 1 111 LYS 111 136 136 LYS LYS A . n A 1 112 ARG 112 137 ? ? ? A . n A 1 113 GLY 113 138 138 GLY GLY A . n A 1 114 PHE 114 139 139 PHE PHE A . n A 1 115 ASN 115 140 140 ASN ASN A . n A 1 116 ASP 116 141 141 ASP ASP A . n A 1 117 ALA 117 142 142 ALA ALA A . n A 1 118 ARG 118 143 143 ARG ARG A . n A 1 119 GLY 119 144 144 GLY GLY A . n A 1 120 ASP 120 145 145 ASP ASP A . n A 1 121 GLY 121 146 146 GLY GLY A . n A 1 122 VAL 122 147 147 VAL VAL A . n A 1 123 ARG 123 148 148 ARG ARG A . n A 1 124 THR 124 149 149 THR THR A . n A 1 125 GLY 125 150 150 GLY GLY A . n A 1 126 ARG 126 151 151 ARG ARG A . n A 1 127 CYS 127 152 152 CYS CYS A . n A 1 128 VAL 128 153 153 VAL VAL A . n A 1 129 SER 129 154 154 SER SER A . n A 1 130 TYR 130 155 155 TYR TYR A . n A 1 131 SER 131 156 156 SER SER A . n A 1 132 ALA 132 157 157 ALA ALA A . n A 1 133 SER 133 158 158 SER SER A . n A 1 134 VAL 134 159 159 VAL VAL A . n A 1 135 LYS 135 160 160 LYS LYS A . n A 1 136 THR 136 161 161 THR THR A . n A 1 137 CYS 137 162 162 CYS CYS A . n A 1 138 GLU 138 163 163 GLU GLU A . n A 1 139 VAL 139 164 164 VAL VAL A . n A 1 140 LEU 140 165 165 LEU LEU A . n A 1 141 SER 141 166 166 SER SER A . n A 1 142 TRP 142 167 167 TRP TRP A . n A 1 143 CYS 143 168 168 CYS CYS A . n A 1 144 PRO 144 169 169 PRO PRO A . n A 1 145 LEU 145 170 170 LEU LEU A . n A 1 146 GLU 146 171 171 GLU GLU A . n A 1 147 LYS 147 172 172 LYS LYS A . n A 1 148 ILE 148 173 173 ILE ILE A . n A 1 149 VAL 149 174 174 VAL VAL A . n A 1 150 ASP 150 175 175 ASP ASP A . n A 1 151 PRO 151 176 176 PRO PRO A . n A 1 152 PRO 152 177 177 PRO PRO A . n A 1 153 ASN 153 178 178 ASN ASN A . n A 1 154 PRO 154 179 179 PRO PRO A . n A 1 155 PRO 155 180 180 PRO PRO A . n A 1 156 LEU 156 181 181 LEU LEU A . n A 1 157 LEU 157 182 182 LEU LEU A . n A 1 158 ALA 158 183 183 ALA ALA A . n A 1 159 ASP 159 184 184 ASP ASP A . n A 1 160 ALA 160 185 185 ALA ALA A . n A 1 161 GLU 161 186 186 GLU GLU A . n A 1 162 ARG 162 187 187 ARG ARG A . n A 1 163 PHE 163 188 188 PHE PHE A . n A 1 164 THR 164 189 189 THR THR A . n A 1 165 VAL 165 190 190 VAL VAL A . n A 1 166 LEU 166 191 191 LEU LEU A . n A 1 167 ILE 167 192 192 ILE ILE A . n A 1 168 LYS 168 193 193 LYS LYS A . n A 1 169 ASN 169 194 194 ASN ASN A . n A 1 170 ASN 170 195 195 ASN ASN A . n A 1 171 ILE 171 196 196 ILE ILE A . n A 1 172 ARG 172 197 197 ARG ARG A . n A 1 173 TYR 173 198 198 TYR TYR A . n A 1 174 PRO 174 199 199 PRO PRO A . n A 1 175 LYS 175 200 200 LYS LYS A . n A 1 176 PHE 176 201 201 PHE PHE A . n A 1 177 ASN 177 202 202 ASN ASN A . n A 1 178 PHE 178 203 203 PHE PHE A . n A 1 179 ASN 179 204 204 ASN ASN A . n A 1 180 LYS 180 205 205 LYS LYS A . n A 1 181 ARG 181 206 206 ARG ARG A . n A 1 182 ASN 182 207 207 ASN ASN A . n A 1 183 ILE 183 208 208 ILE ILE A . n A 1 184 LEU 184 209 209 LEU LEU A . n A 1 185 PRO 185 210 210 PRO PRO A . n A 1 186 ASN 186 211 211 ASN ASN A . n A 1 187 ILE 187 212 212 ILE ILE A . n A 1 188 ASN 188 213 213 ASN ASN A . n A 1 189 SER 189 214 214 SER SER A . n A 1 190 SER 190 215 215 SER SER A . n A 1 191 TYR 191 216 216 TYR TYR A . n A 1 192 LEU 192 217 217 LEU LEU A . n A 1 193 THR 193 218 218 THR THR A . n A 1 194 HIS 194 219 219 HIS HIS A . n A 1 195 CYS 195 220 220 CYS CYS A . n A 1 196 VAL 196 221 221 VAL VAL A . n A 1 197 PHE 197 222 222 PHE PHE A . n A 1 198 SER 198 223 223 SER SER A . n A 1 199 ARG 199 224 224 ARG ARG A . n A 1 200 LYS 200 225 225 LYS LYS A . n A 1 201 THR 201 226 226 THR THR A . n A 1 202 ASP 202 227 227 ASP ASP A . n A 1 203 PRO 203 228 228 PRO PRO A . n A 1 204 ASP 204 229 229 ASP ASP A . n A 1 205 CYS 205 230 230 CYS CYS A . n A 1 206 PRO 206 231 231 PRO PRO A . n A 1 207 ILE 207 232 232 ILE ILE A . n A 1 208 PHE 208 233 233 PHE PHE A . n A 1 209 ARG 209 234 234 ARG ARG A . n A 1 210 LEU 210 235 235 LEU LEU A . n A 1 211 GLY 211 236 236 GLY GLY A . n A 1 212 ASP 212 237 237 ASP ASP A . n A 1 213 ILE 213 238 238 ILE ILE A . n A 1 214 VAL 214 239 239 VAL VAL A . n A 1 215 GLY 215 240 240 GLY GLY A . n A 1 216 GLU 216 241 241 GLU GLU A . n A 1 217 ALA 217 242 242 ALA ALA A . n A 1 218 GLU 218 243 243 GLU GLU A . n A 1 219 GLU 219 244 244 GLU GLU A . n A 1 220 ASP 220 245 245 ASP ASP A . n A 1 221 PHE 221 246 246 PHE PHE A . n A 1 222 GLN 222 247 247 GLN GLN A . n A 1 223 ILE 223 248 248 ILE ILE A . n A 1 224 MET 224 249 249 MET MET A . n A 1 225 ALA 225 250 250 ALA ALA A . n A 1 226 VAL 226 251 251 VAL VAL A . n A 1 227 ARG 227 252 252 ARG ARG A . n A 1 228 GLY 228 253 253 GLY GLY A . n A 1 229 GLY 229 254 254 GLY GLY A . n A 1 230 VAL 230 255 255 VAL VAL A . n A 1 231 MET 231 256 256 MET MET A . n A 1 232 GLY 232 257 257 GLY GLY A . n A 1 233 VAL 233 258 258 VAL VAL A . n A 1 234 GLN 234 259 259 GLN GLN A . n A 1 235 ILE 235 260 260 ILE ILE A . n A 1 236 ARG 236 261 261 ARG ARG A . n A 1 237 TRP 237 262 262 TRP TRP A . n A 1 238 ASP 238 263 263 ASP ASP A . n A 1 239 CYS 239 264 264 CYS CYS A . n A 1 240 ASP 240 265 265 ASP ASP A . n A 1 241 LEU 241 266 266 LEU LEU A . n A 1 242 ASP 242 267 267 ASP ASP A . n A 1 243 MET 243 268 268 MET MET A . n A 1 244 PRO 244 269 269 PRO PRO A . n A 1 245 GLN 245 270 270 GLN GLN A . n A 1 246 SER 246 271 271 SER SER A . n A 1 247 TRP 247 272 272 TRP TRP A . n A 1 248 CYS 248 273 273 CYS CYS A . n A 1 249 VAL 249 274 274 VAL VAL A . n A 1 250 PRO 250 275 275 PRO PRO A . n A 1 251 ARG 251 276 276 ARG ARG A . n A 1 252 TYR 252 277 277 TYR TYR A . n A 1 253 THR 253 278 278 THR THR A . n A 1 254 PHE 254 279 279 PHE PHE A . n A 1 255 ARG 255 280 280 ARG ARG A . n A 1 256 ARG 256 281 281 ARG ARG A . n A 1 257 LEU 257 282 282 LEU LEU A . n A 1 258 ASP 258 283 283 ASP ASP A . n A 1 259 ASN 259 284 284 ASN ASN A . n A 1 260 LYS 260 285 285 LYS LYS A . n A 1 261 ASP 261 286 286 ASP ASP A . n A 1 262 PRO 262 287 287 PRO PRO A . n A 1 263 ASP 263 288 288 ASP ASP A . n A 1 264 ASN 264 289 289 ASN ASN A . n A 1 265 ASN 265 290 290 ASN ASN A . n A 1 266 VAL 266 291 291 VAL VAL A . n A 1 267 ALA 267 292 292 ALA ALA A . n A 1 268 PRO 268 293 293 PRO PRO A . n A 1 269 GLY 269 294 294 GLY GLY A . n A 1 270 TYR 270 295 295 TYR TYR A . n A 1 271 ASN 271 296 296 ASN ASN A . n A 1 272 PHE 272 297 297 PHE PHE A . n A 1 273 ARG 273 298 298 ARG ARG A . n A 1 274 PHE 274 299 299 PHE PHE A . n A 1 275 ALA 275 300 300 ALA ALA A . n A 1 276 LYS 276 301 301 LYS LYS A . n A 1 277 TYR 277 302 302 TYR TYR A . n A 1 278 TYR 278 303 303 TYR TYR A . n A 1 279 LYS 279 304 304 LYS LYS A . n A 1 280 ASN 280 305 305 ASN ASN A . n A 1 281 SER 281 306 306 SER SER A . n A 1 282 ASP 282 307 307 ASP ASP A . n A 1 283 GLY 283 308 308 GLY GLY A . n A 1 284 THR 284 309 309 THR THR A . n A 1 285 GLU 285 310 310 GLU GLU A . n A 1 286 THR 286 311 311 THR THR A . n A 1 287 ARG 287 312 312 ARG ARG A . n A 1 288 THR 288 313 313 THR THR A . n A 1 289 LEU 289 314 314 LEU LEU A . n A 1 290 ILE 290 315 315 ILE ILE A . n A 1 291 LYS 291 316 316 LYS LYS A . n A 1 292 GLY 292 317 317 GLY GLY A . n A 1 293 TYR 293 318 318 TYR TYR A . n A 1 294 GLY 294 319 319 GLY GLY A . n A 1 295 ILE 295 320 320 ILE ILE A . n A 1 296 ARG 296 321 321 ARG ARG A . n A 1 297 PHE 297 322 322 PHE PHE A . n A 1 298 ASP 298 323 323 ASP ASP A . n A 1 299 VAL 299 324 324 VAL VAL A . n A 1 300 MET 300 325 325 MET MET A . n A 1 301 VAL 301 326 326 VAL VAL A . n A 1 302 PHE 302 327 327 PHE PHE A . n A 1 303 GLY 303 328 328 GLY GLY A . n A 1 304 GLN 304 329 329 GLN GLN A . n A 1 305 ALA 305 330 330 ALA ALA A . n A 1 306 GLY 306 331 331 GLY GLY A . n A 1 307 LYS 307 332 332 LYS LYS A . n A 1 308 PHE 308 333 333 PHE PHE A . n A 1 309 ASN 309 334 334 ASN ASN A . n A 1 310 ILE 310 335 335 ILE ILE A . n A 1 311 ILE 311 336 336 ILE ILE A . n A 1 312 PRO 312 337 337 PRO PRO A . n A 1 313 THR 313 338 338 THR THR A . n A 1 314 LEU 314 339 339 LEU LEU A . n A 1 315 LEU 315 340 340 LEU LEU A . n A 1 316 ASN 316 341 341 ASN ASN A . n A 1 317 ILE 317 342 342 ILE ILE A . n A 1 318 GLY 318 343 343 GLY GLY A . n A 1 319 ALA 319 344 344 ALA ALA A . n A 1 320 GLY 320 345 345 GLY GLY A . n A 1 321 LEU 321 346 346 LEU LEU A . n A 1 322 ALA 322 347 347 ALA ALA A . n A 1 323 LEU 323 348 348 LEU LEU A . n A 1 324 LEU 324 349 349 LEU LEU A . n A 1 325 GLY 325 350 350 GLY GLY A . n A 1 326 LEU 326 351 351 LEU LEU A . n A 1 327 VAL 327 352 352 VAL VAL A . n A 1 328 ASN 328 353 353 ASN ASN A . n A 1 329 VAL 329 354 354 VAL VAL A . n A 1 330 ILE 330 355 355 ILE ILE A . n A 1 331 CYS 331 356 356 CYS CYS A . n A 1 332 ASP 332 357 357 ASP ASP A . n A 1 333 TRP 333 358 358 TRP TRP A . n A 1 334 ILE 334 359 359 ILE ILE A . n A 1 335 VAL 335 360 360 VAL VAL A . n A 1 336 LEU 336 361 361 LEU LEU A . n A 1 337 THR 337 362 ? ? ? A . n A 1 338 PHE 338 363 ? ? ? A . n A 1 339 MET 339 364 ? ? ? A . n A 1 340 LYS 340 365 ? ? ? A . n A 1 341 ARG 341 366 ? ? ? A . n A 1 342 LYS 342 367 ? ? ? A . n A 1 343 GLN 343 368 ? ? ? A . n A 1 344 HIS 344 369 ? ? ? A . n A 1 345 TYR 345 370 ? ? ? A . n A 1 346 LYS 346 371 ? ? ? A . n A 1 347 GLU 347 372 ? ? ? A . n A 1 348 GLN 348 373 ? ? ? A . n A 1 349 LYS 349 374 ? ? ? A . n A 1 350 TYR 350 375 ? ? ? A . n A 1 351 THR 351 376 ? ? ? A . n A 1 352 TYR 352 377 ? ? ? A . n A 1 353 VAL 353 378 ? ? ? A . n A 1 354 ASP 354 379 ? ? ? A . n A 1 355 ASP 355 380 ? ? ? A . n A 1 356 PHE 356 381 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 GD 1 382 382 GD GD A . E 3 GD 1 383 383 GD GD A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 88 A ASN 113 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 188 A ASN 213 ? ASN 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 14010 ? 1 MORE -36 ? 1 'SSA (A^2)' 45980 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5000000000 0.8660254038 0.0000000000 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A GD 382 ? D GD . 2 1 A GD 383 ? E GD . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-07-28 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 4 'Structure model' 2 0 2020-07-29 5 'Structure model' 2 1 2021-10-13 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Non-polymer description' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' Advisory 5 4 'Structure model' 'Atomic model' 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Database references' 8 4 'Structure model' 'Derived calculations' 9 4 'Structure model' 'Structure summary' 10 5 'Structure model' 'Database references' 11 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' atom_site 3 4 'Structure model' chem_comp 4 4 'Structure model' database_PDB_caveat 5 4 'Structure model' entity 6 4 'Structure model' pdbx_branch_scheme 7 4 'Structure model' pdbx_chem_comp_identifier 8 4 'Structure model' pdbx_entity_branch 9 4 'Structure model' pdbx_entity_branch_descriptor 10 4 'Structure model' pdbx_entity_branch_link 11 4 'Structure model' pdbx_entity_branch_list 12 4 'Structure model' pdbx_entity_nonpoly 13 4 'Structure model' pdbx_nonpoly_scheme 14 4 'Structure model' pdbx_struct_assembly_gen 15 4 'Structure model' pdbx_struct_special_symmetry 16 4 'Structure model' pdbx_validate_chiral 17 4 'Structure model' pdbx_validate_close_contact 18 4 'Structure model' struct_asym 19 4 'Structure model' struct_conn 20 4 'Structure model' struct_ref_seq_dif 21 4 'Structure model' struct_site 22 4 'Structure model' struct_site_gen 23 5 'Structure model' chem_comp 24 5 'Structure model' database_2 25 5 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.contact_author' 3 3 'Structure model' '_software.contact_author_email' 4 3 'Structure model' '_software.date' 5 3 'Structure model' '_software.language' 6 3 'Structure model' '_software.location' 7 3 'Structure model' '_software.name' 8 3 'Structure model' '_software.type' 9 3 'Structure model' '_software.version' 10 4 'Structure model' '_atom_site.auth_asym_id' 11 4 'Structure model' '_atom_site.auth_seq_id' 12 4 'Structure model' '_atom_site.label_asym_id' 13 4 'Structure model' '_chem_comp.name' 14 4 'Structure model' '_chem_comp.type' 15 4 'Structure model' '_entity.formula_weight' 16 4 'Structure model' '_entity.pdbx_description' 17 4 'Structure model' '_entity.pdbx_number_of_molecules' 18 4 'Structure model' '_entity.type' 19 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 20 4 'Structure model' '_pdbx_struct_special_symmetry.label_asym_id' 21 4 'Structure model' '_pdbx_validate_chiral.auth_asym_id' 22 4 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_1' 23 4 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_2' 24 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 25 4 'Structure model' '_struct_conn.pdbx_role' 26 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 27 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 28 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 29 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 30 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 31 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 32 4 'Structure model' '_struct_ref_seq_dif.details' 33 5 'Structure model' '_chem_comp.pdbx_synonyms' 34 5 'Structure model' '_database_2.pdbx_DOI' 35 5 'Structure model' '_database_2.pdbx_database_accession' 36 5 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 PHENIX . ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 4 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 ADSC Quantum ? ? ? ? 'data collection' ? ? ? 6 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 7 PHASER . ? ? ? ? phasing ? ? ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O3 _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 NAG _pdbx_validate_close_contact.auth_seq_id_1 1 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O5 _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 NAG _pdbx_validate_close_contact.auth_seq_id_2 2 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.13 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 46 ? ? -66.19 -77.87 2 1 VAL A 89 ? ? -39.23 -33.36 3 1 ALA A 90 ? ? -43.72 -89.81 4 1 PRO A 96 ? ? -103.87 -157.09 5 1 ASP A 99 ? ? -59.64 -75.81 6 1 SER A 101 ? ? -51.48 179.58 7 1 THR A 106 ? ? -130.27 -33.07 8 1 ASN A 113 ? ? 45.08 21.90 9 1 SER A 166 ? ? -177.88 -172.90 10 1 LEU A 182 ? ? -92.41 53.90 11 1 ASN A 202 ? ? 31.03 55.93 12 1 LEU A 217 ? ? -69.98 2.53 13 1 HIS A 219 ? ? -159.62 8.80 14 1 ASP A 227 ? ? -115.60 79.76 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 C1 ? B NAG 1 ? 'WRONG HAND' . 2 1 C1 ? B NAG 2 ? 'WRONG HAND' . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A THR 33 ? OG1 ? A THR 8 OG1 2 1 Y 1 A THR 33 ? CG2 ? A THR 8 CG2 3 1 Y 1 A LEU 34 ? CG ? A LEU 9 CG 4 1 Y 1 A LEU 34 ? CD1 ? A LEU 9 CD1 5 1 Y 1 A LEU 34 ? CD2 ? A LEU 9 CD2 6 1 Y 1 A ASN 35 ? CG ? A ASN 10 CG 7 1 Y 1 A ASN 35 ? OD1 ? A ASN 10 OD1 8 1 Y 1 A ASN 35 ? ND2 ? A ASN 10 ND2 9 1 Y 1 A ARG 36 ? CG ? A ARG 11 CG 10 1 Y 1 A ARG 36 ? CD ? A ARG 11 CD 11 1 Y 1 A ARG 36 ? NE ? A ARG 11 NE 12 1 Y 1 A ARG 36 ? CZ ? A ARG 11 CZ 13 1 Y 1 A ARG 36 ? NH1 ? A ARG 11 NH1 14 1 Y 1 A ARG 36 ? NH2 ? A ARG 11 NH2 15 1 Y 1 A GLN 39 ? CG ? A GLN 14 CG 16 1 Y 1 A GLN 39 ? CD ? A GLN 14 CD 17 1 Y 1 A GLN 39 ? OE1 ? A GLN 14 OE1 18 1 Y 1 A GLN 39 ? NE2 ? A GLN 14 NE2 19 1 Y 1 A ASN 54 ? CG ? A ASN 29 CG 20 1 Y 1 A ASN 54 ? OD1 ? A ASN 29 OD1 21 1 Y 1 A ASN 54 ? ND2 ? A ASN 29 ND2 22 1 Y 1 A ASP 59 ? CG ? A ASP 34 CG 23 1 Y 1 A ASP 59 ? OD1 ? A ASP 34 OD1 24 1 Y 1 A ASP 59 ? OD2 ? A ASP 34 OD2 25 1 Y 1 A THR 60 ? OG1 ? A THR 35 OG1 26 1 Y 1 A THR 60 ? CG2 ? A THR 35 CG2 27 1 Y 1 A LYS 70 ? CG ? A LYS 45 CG 28 1 Y 1 A LYS 70 ? CD ? A LYS 45 CD 29 1 Y 1 A LYS 70 ? CE ? A LYS 45 CE 30 1 Y 1 A LYS 70 ? NZ ? A LYS 45 NZ 31 1 Y 1 A GLU 81 ? CG ? A GLU 56 CG 32 1 Y 1 A GLU 81 ? CD ? A GLU 56 CD 33 1 Y 1 A GLU 81 ? OE1 ? A GLU 56 OE1 34 1 Y 1 A GLU 81 ? OE2 ? A GLU 56 OE2 35 1 Y 1 A ASP 91 ? CG ? A ASP 66 CG 36 1 Y 1 A ASP 91 ? OD1 ? A ASP 66 OD1 37 1 Y 1 A ASP 91 ? OD2 ? A ASP 66 OD2 38 1 Y 1 A LYS 118 ? CG ? A LYS 93 CG 39 1 Y 1 A LYS 118 ? CD ? A LYS 93 CD 40 1 Y 1 A LYS 118 ? CE ? A LYS 93 CE 41 1 Y 1 A LYS 118 ? NZ ? A LYS 93 NZ 42 1 Y 1 A ARG 133 ? CG ? A ARG 108 CG 43 1 Y 1 A ARG 133 ? CD ? A ARG 108 CD 44 1 Y 1 A ARG 133 ? NE ? A ARG 108 NE 45 1 Y 1 A ARG 133 ? CZ ? A ARG 108 CZ 46 1 Y 1 A ARG 133 ? NH1 ? A ARG 108 NH1 47 1 Y 1 A ARG 133 ? NH2 ? A ARG 108 NH2 48 1 Y 1 A LYS 136 ? CG ? A LYS 111 CG 49 1 Y 1 A LYS 136 ? CD ? A LYS 111 CD 50 1 Y 1 A LYS 136 ? CE ? A LYS 111 CE 51 1 Y 1 A LYS 136 ? NZ ? A LYS 111 NZ 52 1 Y 1 A PHE 139 ? CG ? A PHE 114 CG 53 1 Y 1 A PHE 139 ? CD1 ? A PHE 114 CD1 54 1 Y 1 A PHE 139 ? CD2 ? A PHE 114 CD2 55 1 Y 1 A PHE 139 ? CE1 ? A PHE 114 CE1 56 1 Y 1 A PHE 139 ? CE2 ? A PHE 114 CE2 57 1 Y 1 A PHE 139 ? CZ ? A PHE 114 CZ 58 1 Y 1 A ASN 140 ? CG ? A ASN 115 CG 59 1 Y 1 A ASN 140 ? OD1 ? A ASN 115 OD1 60 1 Y 1 A ASN 140 ? ND2 ? A ASN 115 ND2 61 1 Y 1 A ASP 141 ? CG ? A ASP 116 CG 62 1 Y 1 A ASP 141 ? OD1 ? A ASP 116 OD1 63 1 Y 1 A ASP 141 ? OD2 ? A ASP 116 OD2 64 1 Y 1 A ARG 143 ? CG ? A ARG 118 CG 65 1 Y 1 A ARG 143 ? CD ? A ARG 118 CD 66 1 Y 1 A ARG 143 ? NE ? A ARG 118 NE 67 1 Y 1 A ARG 143 ? CZ ? A ARG 118 CZ 68 1 Y 1 A ARG 143 ? NH1 ? A ARG 118 NH1 69 1 Y 1 A ARG 143 ? NH2 ? A ARG 118 NH2 70 1 Y 1 A ARG 148 ? CG ? A ARG 123 CG 71 1 Y 1 A ARG 148 ? CD ? A ARG 123 CD 72 1 Y 1 A ARG 148 ? NE ? A ARG 123 NE 73 1 Y 1 A ARG 148 ? CZ ? A ARG 123 CZ 74 1 Y 1 A ARG 148 ? NH1 ? A ARG 123 NH1 75 1 Y 1 A ARG 148 ? NH2 ? A ARG 123 NH2 76 1 Y 1 A ARG 151 ? CG ? A ARG 126 CG 77 1 Y 1 A ARG 151 ? CD ? A ARG 126 CD 78 1 Y 1 A ARG 151 ? NE ? A ARG 126 NE 79 1 Y 1 A ARG 151 ? CZ ? A ARG 126 CZ 80 1 Y 1 A ARG 151 ? NH1 ? A ARG 126 NH1 81 1 Y 1 A ARG 151 ? NH2 ? A ARG 126 NH2 82 1 Y 1 A LYS 160 ? CG ? A LYS 135 CG 83 1 Y 1 A LYS 160 ? CD ? A LYS 135 CD 84 1 Y 1 A LYS 160 ? CE ? A LYS 135 CE 85 1 Y 1 A LYS 160 ? NZ ? A LYS 135 NZ 86 1 Y 1 A ARG 187 ? CG ? A ARG 162 CG 87 1 Y 1 A ARG 187 ? CD ? A ARG 162 CD 88 1 Y 1 A ARG 187 ? NE ? A ARG 162 NE 89 1 Y 1 A ARG 187 ? CZ ? A ARG 162 CZ 90 1 Y 1 A ARG 187 ? NH1 ? A ARG 162 NH1 91 1 Y 1 A ARG 187 ? NH2 ? A ARG 162 NH2 92 1 Y 1 A ASN 211 ? CG ? A ASN 186 CG 93 1 Y 1 A ASN 211 ? OD1 ? A ASN 186 OD1 94 1 Y 1 A ASN 211 ? ND2 ? A ASN 186 ND2 95 1 Y 1 A LYS 225 ? CG ? A LYS 200 CG 96 1 Y 1 A LYS 225 ? CD ? A LYS 200 CD 97 1 Y 1 A LYS 225 ? CE ? A LYS 200 CE 98 1 Y 1 A LYS 225 ? NZ ? A LYS 200 NZ 99 1 Y 1 A GLN 270 ? CG ? A GLN 245 CG 100 1 Y 1 A GLN 270 ? CD ? A GLN 245 CD 101 1 Y 1 A GLN 270 ? OE1 ? A GLN 245 OE1 102 1 Y 1 A GLN 270 ? NE2 ? A GLN 245 NE2 103 1 Y 1 A ARG 276 ? CG ? A ARG 251 CG 104 1 Y 1 A ARG 276 ? CD ? A ARG 251 CD 105 1 Y 1 A ARG 276 ? NE ? A ARG 251 NE 106 1 Y 1 A ARG 276 ? CZ ? A ARG 251 CZ 107 1 Y 1 A ARG 276 ? NH1 ? A ARG 251 NH1 108 1 Y 1 A ARG 276 ? NH2 ? A ARG 251 NH2 109 1 Y 1 A LYS 304 ? CG ? A LYS 279 CG 110 1 Y 1 A LYS 304 ? CD ? A LYS 279 CD 111 1 Y 1 A LYS 304 ? CE ? A LYS 279 CE 112 1 Y 1 A LYS 304 ? NZ ? A LYS 279 NZ 113 1 Y 1 A GLN 329 ? CG ? A GLN 304 CG 114 1 Y 1 A GLN 329 ? CD ? A GLN 304 CD 115 1 Y 1 A GLN 329 ? OE1 ? A GLN 304 OE1 116 1 Y 1 A GLN 329 ? NE2 ? A GLN 304 NE2 117 1 Y 1 A ILE 335 ? CG1 ? A ILE 310 CG1 118 1 Y 1 A ILE 335 ? CG2 ? A ILE 310 CG2 119 1 Y 1 A ILE 335 ? CD1 ? A ILE 310 CD1 120 1 Y 1 A ILE 336 ? CG1 ? A ILE 311 CG1 121 1 Y 1 A ILE 336 ? CG2 ? A ILE 311 CG2 122 1 Y 1 A ILE 336 ? CD1 ? A ILE 311 CD1 123 1 Y 1 A LEU 348 ? CG ? A LEU 323 CG 124 1 Y 1 A LEU 348 ? CD1 ? A LEU 323 CD1 125 1 Y 1 A LEU 348 ? CD2 ? A LEU 323 CD2 126 1 Y 1 A VAL 352 ? CG1 ? A VAL 327 CG1 127 1 Y 1 A VAL 352 ? CG2 ? A VAL 327 CG2 128 1 Y 1 A VAL 354 ? CG1 ? A VAL 329 CG1 129 1 Y 1 A VAL 354 ? CG2 ? A VAL 329 CG2 130 1 Y 1 A ILE 355 ? CG1 ? A ILE 330 CG1 131 1 Y 1 A ILE 355 ? CG2 ? A ILE 330 CG2 132 1 Y 1 A ILE 355 ? CD1 ? A ILE 330 CD1 133 1 Y 1 A TRP 358 ? CG ? A TRP 333 CG 134 1 Y 1 A TRP 358 ? CD1 ? A TRP 333 CD1 135 1 Y 1 A TRP 358 ? CD2 ? A TRP 333 CD2 136 1 Y 1 A TRP 358 ? NE1 ? A TRP 333 NE1 137 1 Y 1 A TRP 358 ? CE2 ? A TRP 333 CE2 138 1 Y 1 A TRP 358 ? CE3 ? A TRP 333 CE3 139 1 Y 1 A TRP 358 ? CZ2 ? A TRP 333 CZ2 140 1 Y 1 A TRP 358 ? CZ3 ? A TRP 333 CZ3 141 1 Y 1 A TRP 358 ? CH2 ? A TRP 333 CH2 142 1 Y 1 A ILE 359 ? CG1 ? A ILE 334 CG1 143 1 Y 1 A ILE 359 ? CG2 ? A ILE 334 CG2 144 1 Y 1 A ILE 359 ? CD1 ? A ILE 334 CD1 145 1 Y 1 A VAL 360 ? CG1 ? A VAL 335 CG1 146 1 Y 1 A VAL 360 ? CG2 ? A VAL 335 CG2 147 1 Y 1 A LEU 361 ? CG ? A LEU 336 CG 148 1 Y 1 A LEU 361 ? CD1 ? A LEU 336 CD1 149 1 Y 1 A LEU 361 ? CD2 ? A LEU 336 CD2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 26 ? A GLY 1 2 1 Y 1 A SER 27 ? A SER 2 3 1 Y 1 A SER 28 ? A SER 3 4 1 Y 1 A LYS 29 ? A LYS 4 5 1 Y 1 A LYS 30 ? A LYS 5 6 1 Y 1 A VAL 31 ? A VAL 6 7 1 Y 1 A ARG 137 ? A ARG 112 8 1 Y 1 A THR 362 ? A THR 337 9 1 Y 1 A PHE 363 ? A PHE 338 10 1 Y 1 A MET 364 ? A MET 339 11 1 Y 1 A LYS 365 ? A LYS 340 12 1 Y 1 A ARG 366 ? A ARG 341 13 1 Y 1 A LYS 367 ? A LYS 342 14 1 Y 1 A GLN 368 ? A GLN 343 15 1 Y 1 A HIS 369 ? A HIS 344 16 1 Y 1 A TYR 370 ? A TYR 345 17 1 Y 1 A LYS 371 ? A LYS 346 18 1 Y 1 A GLU 372 ? A GLU 347 19 1 Y 1 A GLN 373 ? A GLN 348 20 1 Y 1 A LYS 374 ? A LYS 349 21 1 Y 1 A TYR 375 ? A TYR 350 22 1 Y 1 A THR 376 ? A THR 351 23 1 Y 1 A TYR 377 ? A TYR 352 24 1 Y 1 A VAL 378 ? A VAL 353 25 1 Y 1 A ASP 379 ? A ASP 354 26 1 Y 1 A ASP 380 ? A ASP 355 27 1 Y 1 A PHE 381 ? A PHE 356 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NAG 1 n B 2 NAG 2 B NAG 2 A NAG 2 n C 2 NAG 1 C NAG 1 A NAG 3 n C 2 NAG 2 C NAG 2 A NAG 4 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][a-D-GlcpNAc]{[(4+1)][a-D-GlcpNAc]{}}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name 'GADOLINIUM ATOM' _pdbx_entity_nonpoly.comp_id GD #