HEADER TRANSPORT PROTEIN 02-MAY-09 3HAR TITLE CRYSTAL STRUCTURE OF BACTERIORHODOPSIN MUTANT I148V CRYSTALLIZED FROM TITLE 2 BICELLES COMPND MOL_ID: 1; COMPND 2 MOLECULE: BACTERIORHODOPSIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BR; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HALOBACTERIUM SALINARUM; SOURCE 3 ORGANISM_COMMON: HALOBACTERIUM HALOBIUM; SOURCE 4 ORGANISM_TAXID: 2242; SOURCE 5 GENE: BOP, VNG_1467G; SOURCE 6 EXPRESSION_SYSTEM: HALOBACTERIUM SALINARUM; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 2242; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: L33 KEYWDS BACTERIORHODOPSIN, PACKING FORCE, VAN DER WAALS, EVOLUTIONARY KEYWDS 2 CONSTRAINT, MEMBRANE PROTEIN, INTEGRAL MEMBRANE PROTEIN, HELICAL KEYWDS 3 MEMBRANE PROTEIN, PROTON TRANSPORT, CELL MEMBRANE, CHROMOPHORE, KEYWDS 4 HYDROGEN ION TRANSPORT, ION TRANSPORT, MEMBRANE, PHOTORECEPTOR KEYWDS 5 PROTEIN, PYRROLIDONE CARBOXYLIC ACID, RECEPTOR, RETINAL PROTEIN, KEYWDS 6 SENSORY TRANSDUCTION, TRANSMEMBRANE, TRANSPORT, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR N.H.JOH,D.YANG,J.U.BOWIE REVDAT 4 27-NOV-24 3HAR 1 REMARK REVDAT 3 13-OCT-21 3HAR 1 REMARK SEQADV LINK REVDAT 2 01-NOV-17 3HAR 1 REMARK REVDAT 1 22-SEP-09 3HAR 0 JRNL AUTH N.H.JOH,A.OBERAI,D.YANG,J.P.WHITELEGGE,J.U.BOWIE JRNL TITL SIMILAR ENERGETIC CONTRIBUTIONS OF PACKING IN THE CORE OF JRNL TITL 2 MEMBRANE AND WATER-SOLUBLE PROTEINS. JRNL REF J.AM.CHEM.SOC. V. 131 10846 2009 JRNL REFN ISSN 0002-7863 JRNL PMID 19603754 JRNL DOI 10.1021/JA904711K REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 51.23 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.9 REMARK 3 NUMBER OF REFLECTIONS : 31134 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.800 REMARK 3 FREE R VALUE TEST SET COUNT : 2423 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1279 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 57.47 REMARK 3 BIN R VALUE (WORKING SET) : 0.2490 REMARK 3 BIN FREE R VALUE SET COUNT : 117 REMARK 3 BIN FREE R VALUE : 0.2880 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1747 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 47 REMARK 3 SOLVENT ATOMS : 133 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.01000 REMARK 3 B33 (A**2) : -0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.101 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.097 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.053 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.439 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1949 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2695 ; 1.452 ; 2.009 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 262 ; 3.812 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 60 ;33.518 ;22.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 316 ;12.662 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ; 7.205 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 327 ; 0.191 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1415 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1025 ; 0.207 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1434 ; 0.320 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 104 ; 0.118 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 44 ; 0.194 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.127 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1201 ; 0.717 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1908 ; 1.141 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 881 ; 1.994 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 768 ; 2.848 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3HAR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-MAY-09. REMARK 100 THE DEPOSITION ID IS D_1000052905. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-APR-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 3.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : KOHZU REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31173 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 95.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.9 REMARK 200 DATA REDUNDANCY : 9.000 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.3800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 60.6 REMARK 200 DATA REDUNDANCY IN SHELL : 2.30 REMARK 200 R MERGE FOR SHELL (I) : 0.40000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.92 M SODIUM PHOSPHATE, 180 MM 1,6 REMARK 280 -HEXANEDIOL, 3.5 % TRIETHYLENE GLYCOL, PFPC USED AS REMARK 280 CRYOPROTECTANT, PH 3.8, HANGING DROP, BICELLE METHOD, REMARK 280 TEMPERATURE 310K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.19000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.19000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 22.53900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 51.20900 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 22.53900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 51.20900 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 64.19000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 22.53900 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 51.20900 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 64.19000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 22.53900 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 51.20900 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 1 REMARK 465 ALA A 2 REMARK 465 GLN A 3 REMARK 465 ILE A 4 REMARK 465 THR A 5 REMARK 465 GLU A 232 REMARK 465 ALA A 233 REMARK 465 GLU A 234 REMARK 465 ALA A 235 REMARK 465 PRO A 236 REMARK 465 GLU A 237 REMARK 465 PRO A 238 REMARK 465 SER A 239 REMARK 465 ALA A 240 REMARK 465 GLY A 241 REMARK 465 ASP A 242 REMARK 465 GLY A 243 REMARK 465 ALA A 244 REMARK 465 ALA A 245 REMARK 465 ALA A 246 REMARK 465 THR A 247 REMARK 465 SER A 248 REMARK 465 ASP A 249 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLY A 231 O REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 CPS A 501 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE RET A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CPS A 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3HAN RELATED DB: PDB REMARK 900 RELATED ID: 3HAO RELATED DB: PDB REMARK 900 RELATED ID: 3HAP RELATED DB: PDB REMARK 900 RELATED ID: 3HAQ RELATED DB: PDB REMARK 900 RELATED ID: 3HAS RELATED DB: PDB DBREF 3HAR A 1 249 UNP P02945 BACR_HALSA 14 262 SEQADV 3HAR VAL A 148 UNP P02945 ILE 161 ENGINEERED MUTATION SEQRES 1 A 249 GLN ALA GLN ILE THR GLY ARG PRO GLU TRP ILE TRP LEU SEQRES 2 A 249 ALA LEU GLY THR ALA LEU MET GLY LEU GLY THR LEU TYR SEQRES 3 A 249 PHE LEU VAL LYS GLY MET GLY VAL SER ASP PRO ASP ALA SEQRES 4 A 249 LYS LYS PHE TYR ALA ILE THR THR LEU VAL PRO ALA ILE SEQRES 5 A 249 ALA PHE THR MET TYR LEU SER MET LEU LEU GLY TYR GLY SEQRES 6 A 249 LEU THR MET VAL PRO PHE GLY GLY GLU GLN ASN PRO ILE SEQRES 7 A 249 TYR TRP ALA ARG TYR ALA ASP TRP LEU PHE THR THR PRO SEQRES 8 A 249 LEU LEU LEU LEU ASP LEU ALA LEU LEU VAL ASP ALA ASP SEQRES 9 A 249 GLN GLY THR ILE LEU ALA LEU VAL GLY ALA ASP GLY ILE SEQRES 10 A 249 MET ILE GLY THR GLY LEU VAL GLY ALA LEU THR LYS VAL SEQRES 11 A 249 TYR SER TYR ARG PHE VAL TRP TRP ALA ILE SER THR ALA SEQRES 12 A 249 ALA MET LEU TYR VAL LEU TYR VAL LEU PHE PHE GLY PHE SEQRES 13 A 249 THR SER LYS ALA GLU SER MET ARG PRO GLU VAL ALA SER SEQRES 14 A 249 THR PHE LYS VAL LEU ARG ASN VAL THR VAL VAL LEU TRP SEQRES 15 A 249 SER ALA TYR PRO VAL VAL TRP LEU ILE GLY SER GLU GLY SEQRES 16 A 249 ALA GLY ILE VAL PRO LEU ASN ILE GLU THR LEU LEU PHE SEQRES 17 A 249 MET VAL LEU ASP VAL SER ALA LYS VAL GLY PHE GLY LEU SEQRES 18 A 249 ILE LEU LEU ARG SER ARG ALA ILE PHE GLY GLU ALA GLU SEQRES 19 A 249 ALA PRO GLU PRO SER ALA GLY ASP GLY ALA ALA ALA THR SEQRES 20 A 249 SER ASP HET RET A 301 20 HET CPS A 501 27 HETNAM RET RETINAL HETNAM CPS 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1- HETNAM 2 CPS PROPANESULFONATE HETSYN CPS CHAPS FORMUL 2 RET C20 H28 O FORMUL 3 CPS C32 H58 N2 O7 S FORMUL 4 HOH *133(H2 O) HELIX 1 1 GLU A 9 VAL A 34 1 26 HELIX 2 2 ASP A 36 LEU A 62 1 27 HELIX 3 3 TRP A 80 ASP A 102 1 23 HELIX 4 4 ASP A 104 THR A 128 1 25 HELIX 5 5 VAL A 130 PHE A 154 1 25 HELIX 6 6 PHE A 154 GLU A 161 1 8 HELIX 7 7 ARG A 164 GLY A 192 1 29 HELIX 8 8 PRO A 200 ARG A 225 1 26 HELIX 9 9 SER A 226 PHE A 230 5 5 SHEET 1 A 2 LEU A 66 PHE A 71 0 SHEET 2 A 2 GLU A 74 TYR A 79 -1 O ILE A 78 N THR A 67 LINK NZ LYS A 216 C15 RET A 301 1555 1555 1.28 SITE 1 AC1 11 TRP A 86 THR A 90 TRP A 138 SER A 141 SITE 2 AC1 11 TRP A 182 TYR A 185 PRO A 186 TRP A 189 SITE 3 AC1 11 ASP A 212 ALA A 215 LYS A 216 SITE 1 AC2 6 GLY A 6 LEU A 61 ILE A 108 HOH A 288 SITE 2 AC2 6 HOH A 299 HOH A 369 CRYST1 45.078 102.418 128.380 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022184 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009764 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007789 0.00000 TER 1831 GLY A 231 HETATM 1832 C1 RET A 301 26.430 10.485 -3.016 1.00 16.41 C HETATM 1833 C2 RET A 301 26.727 9.887 -4.363 1.00 17.46 C HETATM 1834 C3 RET A 301 27.244 8.466 -4.309 1.00 17.90 C HETATM 1835 C4 RET A 301 27.975 8.082 -3.016 1.00 16.99 C HETATM 1836 C5 RET A 301 27.247 8.543 -1.770 1.00 15.03 C HETATM 1837 C6 RET A 301 26.465 9.650 -1.751 1.00 15.26 C HETATM 1838 C7 RET A 301 25.806 9.993 -0.451 1.00 16.41 C HETATM 1839 C8 RET A 301 24.851 10.902 -0.301 1.00 14.62 C HETATM 1840 C9 RET A 301 24.203 11.179 1.001 1.00 16.18 C HETATM 1841 C10 RET A 301 23.284 12.155 1.004 1.00 14.66 C HETATM 1842 C11 RET A 301 22.539 12.573 2.181 1.00 17.39 C HETATM 1843 C12 RET A 301 21.663 13.547 1.948 1.00 19.51 C HETATM 1844 C13 RET A 301 20.795 14.209 2.917 1.00 22.17 C HETATM 1845 C14 RET A 301 20.098 15.245 2.404 1.00 24.64 C HETATM 1846 C15 RET A 301 19.172 16.118 3.096 1.00 27.41 C HETATM 1847 C16 RET A 301 26.327 12.022 -2.926 1.00 15.14 C HETATM 1848 C17 RET A 301 24.923 10.286 -3.296 1.00 15.44 C HETATM 1849 C18 RET A 301 27.453 7.693 -0.545 1.00 17.63 C HETATM 1850 C19 RET A 301 24.527 10.401 2.250 1.00 15.37 C HETATM 1851 C20 RET A 301 20.758 13.767 4.355 1.00 22.01 C HETATM 1852 C1 CPS A 501 4.489 23.223 -15.148 1.00 36.41 C HETATM 1853 C2 CPS A 501 6.000 23.187 -14.868 1.00 36.34 C HETATM 1854 C3 CPS A 501 6.261 25.389 -16.206 1.00 34.84 C HETATM 1855 C4 CPS A 501 7.019 26.139 -17.310 1.00 34.39 C HETATM 1856 C5 CPS A 501 8.533 26.142 -17.055 1.00 34.82 C HETATM 1857 C6 CPS A 501 8.991 24.692 -16.918 1.00 34.22 C HETATM 1858 C7 CPS A 501 10.519 24.710 -17.018 1.00 35.51 C HETATM 1859 C8 CPS A 501 10.793 25.876 -17.975 1.00 35.44 C HETATM 1860 C9 CPS A 501 9.445 26.590 -18.215 1.00 35.08 C HETATM 1861 C10 CPS A 501 8.817 26.964 -15.781 1.00 34.38 C HETATM 1862 C11 CPS A 501 6.204 23.858 -13.509 1.00 36.43 C HETATM 1863 C12 CPS A 501 4.017 22.341 -16.308 1.00 36.95 C HETATM 1864 C13 CPS A 501 4.486 20.890 -16.181 1.00 37.42 C HETATM 1865 C14 CPS A 501 6.002 20.837 -15.976 1.00 36.46 C HETATM 1866 C15 CPS A 501 6.501 21.728 -14.819 1.00 36.07 C HETATM 1867 C16 CPS A 501 8.032 21.611 -14.689 1.00 35.44 C HETATM 1868 C17 CPS A 501 8.849 22.468 -15.662 1.00 34.77 C HETATM 1869 C18 CPS A 501 8.317 23.906 -15.777 1.00 34.93 C HETATM 1870 C19 CPS A 501 6.781 23.956 -15.965 1.00 35.12 C HETATM 1871 C20 CPS A 501 9.581 28.097 -18.506 1.00 36.48 C HETATM 1872 C21 CPS A 501 8.256 28.729 -18.943 1.00 36.54 C HETATM 1873 C22 CPS A 501 10.691 28.429 -19.517 1.00 38.54 C HETATM 1874 C23 CPS A 501 10.340 28.105 -20.973 1.00 39.66 C HETATM 1875 C24 CPS A 501 11.533 28.354 -21.870 1.00 40.00 C HETATM 1876 O2 CPS A 501 4.144 20.179 -17.382 1.00 37.53 O HETATM 1877 O3 CPS A 501 8.896 21.844 -16.958 1.00 34.00 O HETATM 1878 O4 CPS A 501 6.707 25.543 -18.576 1.00 33.72 O HETATM 1879 O HOH A 250 29.960 19.761 20.207 1.00 37.53 O HETATM 1880 O HOH A 251 14.128 14.205 -5.672 1.00 19.63 O HETATM 1881 O HOH A 252 28.082 12.599 32.791 1.00 20.41 O HETATM 1882 O HOH A 253 31.687 5.979 -21.078 1.00 25.14 O HETATM 1883 O HOH A 254 35.306 12.832 -17.357 1.00 26.67 O HETATM 1884 O HOH A 255 34.166 13.724 19.923 1.00 22.83 O HETATM 1885 O HOH A 256 19.514 12.806 8.446 1.00 20.58 O HETATM 1886 O HOH A 257 20.352 12.601 -12.059 1.00 28.57 O HETATM 1887 O HOH A 258 18.121 15.928 -3.790 1.00 28.45 O HETATM 1888 O HOH A 259 18.070 5.709 -15.315 1.00 26.29 O HETATM 1889 O HOH A 260 29.922 18.833 2.662 1.00 29.73 O HETATM 1890 O HOH A 261 23.062 5.062 -18.789 1.00 39.36 O HETATM 1891 O HOH A 262 12.270 28.992 25.451 1.00 39.30 O HETATM 1892 O HOH A 263 39.227 18.566 19.585 1.00 29.00 O HETATM 1893 O HOH A 264 6.631 32.349 16.556 1.00 23.65 O HETATM 1894 O HOH A 265 20.034 27.759 27.114 1.00 36.46 O HETATM 1895 O HOH A 266 14.887 7.724 -17.106 1.00 26.93 O HETATM 1896 O HOH A 267 37.431 13.345 24.443 1.00 46.63 O HETATM 1897 O HOH A 268 11.403 13.756 19.686 1.00 28.72 O HETATM 1898 O HOH A 269 34.150 2.573 -19.199 1.00 25.27 O HETATM 1899 O HOH A 270 30.546 16.254 -17.461 1.00 19.09 O HETATM 1900 O HOH A 271 17.590 17.486 -0.272 1.00 30.15 O HETATM 1901 O HOH A 272 10.915 20.060 -13.889 1.00 32.31 O HETATM 1902 O HOH A 273 31.487 9.592 -22.864 1.00 26.61 O HETATM 1903 O HOH A 274 23.264 18.631 24.708 1.00 34.27 O HETATM 1904 O HOH A 275 29.761 7.772 -24.309 1.00 28.34 O HETATM 1905 O HOH A 276 12.201 8.860 -16.121 1.00 23.19 O HETATM 1906 O HOH A 277 11.086 21.203 21.768 1.00 27.02 O HETATM 1907 O HOH A 278 13.553 19.516 -14.116 1.00 27.48 O HETATM 1908 O HOH A 279 18.013 18.905 -3.653 1.00 25.94 O HETATM 1909 O HOH A 280 19.639 23.146 -16.254 1.00 31.46 O HETATM 1910 O HOH A 281 16.184 6.208 21.921 1.00 26.26 O HETATM 1911 O HOH A 282 18.740 12.486 -9.939 1.00 27.04 O HETATM 1912 O HOH A 283 29.394 14.038 25.799 1.00 31.34 O HETATM 1913 O HOH A 284 35.511 12.429 13.357 1.00 31.92 O HETATM 1914 O HOH A 285 7.964 28.152 19.769 1.00 31.23 O HETATM 1915 O HOH A 286 28.942 16.644 -19.689 1.00 25.87 O HETATM 1916 O HOH A 287 33.012 11.200 19.274 1.00 35.41 O HETATM 1917 O HOH A 288 35.954 20.610 21.911 1.00 38.23 O HETATM 1918 O HOH A 289 5.328 28.501 18.720 1.00 40.41 O HETATM 1919 O HOH A 290 32.301 20.076 3.948 1.00 34.34 O HETATM 1920 O HOH A 291 5.491 15.446 -17.835 1.00 46.05 O HETATM 1921 O HOH A 292 23.060 5.510 -16.064 1.00 43.34 O HETATM 1922 O HOH A 293 19.134 1.930 4.570 1.00 33.81 O HETATM 1923 O HOH A 294 21.304 13.744 -9.207 1.00 43.95 O HETATM 1924 O HOH A 295 10.542 24.023 21.142 1.00 33.66 O HETATM 1925 O HOH A 296 27.688 19.100 -18.508 1.00 31.47 O HETATM 1926 O HOH A 297 36.260 12.365 -14.075 1.00 32.57 O HETATM 1927 O HOH A 298 22.199 18.784 27.731 1.00 39.75 O HETATM 1928 O HOH A 299 10.366 19.667 -16.536 1.00 36.00 O HETATM 1929 O HOH A 300 33.817 9.220 21.474 1.00 36.43 O HETATM 1930 O HOH A 302 33.704 9.296 24.350 1.00 43.20 O HETATM 1931 O HOH A 303 16.441 19.490 9.225 1.00 49.42 O HETATM 1932 O HOH A 304 12.655 35.752 17.879 1.00 49.27 O HETATM 1933 O HOH A 305 29.974 3.182 21.295 1.00 45.46 O HETATM 1934 O HOH A 306 7.225 34.071 22.143 1.00 35.31 O HETATM 1935 O HOH A 307 38.037 10.420 -13.506 1.00 40.04 O HETATM 1936 O HOH A 308 6.855 8.886 -11.467 1.00 35.37 O HETATM 1937 O HOH A 309 16.562 4.562 19.711 1.00 38.78 O HETATM 1938 O HOH A 310 8.844 19.487 15.825 1.00 41.09 O HETATM 1939 O HOH A 311 32.191 15.275 -24.318 1.00 45.62 O HETATM 1940 O HOH A 312 27.472 30.419 21.811 1.00 46.41 O HETATM 1941 O HOH A 313 35.037 9.606 17.251 1.00 32.14 O HETATM 1942 O HOH A 314 34.478 7.082 16.346 1.00 36.28 O HETATM 1943 O HOH A 315 26.518 28.799 23.607 1.00 45.53 O HETATM 1944 O HOH A 316 31.421 9.857 27.148 1.00 41.58 O HETATM 1945 O HOH A 317 35.708 2.788 17.625 1.00 35.60 O HETATM 1946 O HOH A 318 23.069 8.578 29.565 1.00 26.15 O HETATM 1947 O HOH A 319 21.226 24.844 -14.780 1.00 36.06 O HETATM 1948 O HOH A 320 13.435 34.941 20.758 1.00 43.44 O HETATM 1949 O HOH A 321 2.501 13.564 -14.808 1.00 52.80 O HETATM 1950 O HOH A 322 9.603 12.183 17.826 1.00 43.22 O HETATM 1951 O HOH A 323 36.918 11.737 -19.132 1.00 50.99 O HETATM 1952 O HOH A 324 37.745 1.612 -19.174 1.00 44.62 O HETATM 1953 O HOH A 325 8.072 13.172 15.669 1.00 55.93 O HETATM 1954 O HOH A 326 34.027 19.266 26.546 1.00 51.57 O HETATM 1955 O HOH A 327 19.329 31.612 -17.135 1.00 46.13 O HETATM 1956 O HOH A 328 30.458 10.472 32.759 1.00 44.61 O HETATM 1957 O HOH A 329 28.602 3.438 23.690 1.00 48.96 O HETATM 1958 O HOH A 330 32.578 11.785 -24.314 1.00 43.97 O HETATM 1959 O HOH A 331 26.768 25.641 21.527 1.00 50.36 O HETATM 1960 O HOH A 332 14.276 20.580 -17.755 1.00 67.22 O HETATM 1961 O HOH A 333 38.525 0.658 -13.900 1.00 42.13 O HETATM 1962 O HOH A 334 19.874 2.192 -19.624 1.00 51.15 O HETATM 1963 O HOH A 335 16.938 9.005 -18.413 1.00 49.91 O HETATM 1964 O HOH A 336 16.749 0.173 -17.817 1.00 51.85 O HETATM 1965 O HOH A 337 18.288 2.614 20.143 1.00 47.05 O HETATM 1966 O HOH A 338 13.976 35.907 23.041 1.00 52.49 O HETATM 1967 O HOH A 339 38.761 0.125 -16.549 1.00 56.38 O HETATM 1968 O HOH A 340 6.463 10.545 -13.326 1.00 47.15 O HETATM 1969 O HOH A 341 19.644 19.664 27.014 1.00 47.45 O HETATM 1970 O HOH A 342 39.690 13.252 14.670 1.00 44.49 O HETATM 1971 O HOH A 343 34.895 5.225 18.294 1.00 40.16 O HETATM 1972 O HOH A 344 17.971 30.118 9.903 1.00 53.81 O HETATM 1973 O HOH A 345 15.110 14.530 31.391 1.00 49.81 O HETATM 1974 O HOH A 346 34.341 1.499 19.722 1.00 48.81 O HETATM 1975 O HOH A 347 34.818 6.351 21.185 1.00 51.45 O HETATM 1976 O HOH A 348 9.019 4.947 -15.554 1.00 46.39 O HETATM 1977 O HOH A 349 3.304 27.925 17.303 1.00 52.99 O HETATM 1978 O HOH A 350 23.554 3.165 -25.800 1.00 52.15 O HETATM 1979 O HOH A 351 24.803 2.847 -21.388 1.00 50.94 O HETATM 1980 O HOH A 352 10.274 27.523 25.962 1.00 52.18 O HETATM 1981 O HOH A 353 37.774 12.526 16.887 1.00 53.89 O HETATM 1982 O HOH A 354 5.531 12.559 -19.370 1.00 48.52 O HETATM 1983 O HOH A 355 7.885 29.374 22.421 1.00 53.89 O HETATM 1984 O HOH A 356 22.943 16.268 29.498 1.00 25.60 O HETATM 1985 O HOH A 357 12.960 11.622 -16.993 1.00 30.22 O HETATM 1986 O HOH A 358 33.202 16.723 24.852 1.00 47.93 O HETATM 1987 O HOH A 359 15.146 2.462 -16.953 1.00 46.20 O HETATM 1988 O HOH A 360 13.249 12.366 21.310 1.00 48.32 O HETATM 1989 O HOH A 361 29.854 16.111 27.765 1.00 43.60 O HETATM 1990 O HOH A 362 23.378 19.882 -20.782 1.00 41.64 O HETATM 1991 O HOH A 363 23.222 25.204 28.998 1.00 47.35 O HETATM 1992 O HOH A 364 9.238 31.895 24.468 1.00 44.37 O HETATM 1993 O HOH A 365 13.477 9.677 22.605 1.00 39.69 O HETATM 1994 O HOH A 366 19.139 1.125 18.212 1.00 36.95 O HETATM 1995 O HOH A 367 19.022 6.847 27.222 1.00 34.23 O HETATM 1996 O HOH A 368 4.296 16.409 19.442 1.00 52.59 O HETATM 1997 O HOH A 369 6.760 26.499 -21.177 1.00 40.37 O HETATM 1998 O HOH A 370 37.982 9.579 13.570 1.00 44.01 O HETATM 1999 O HOH A 371 28.788 21.653 22.031 1.00 37.06 O HETATM 2000 O HOH A 372 36.507 10.869 15.286 1.00 42.00 O HETATM 2001 O HOH A 373 16.978 4.134 -17.203 1.00 46.55 O HETATM 2002 O HOH A 374 11.304 34.032 28.175 1.00 51.74 O HETATM 2003 O HOH A 375 21.504 0.161 -18.039 1.00 37.86 O HETATM 2004 O HOH A 376 8.056 22.342 18.266 1.00 52.08 O HETATM 2005 O HOH A 377 21.527 20.605 24.817 1.00 52.97 O HETATM 2006 O HOH A 378 23.261 8.487 -28.512 1.00 53.90 O HETATM 2007 O HOH A 379 11.972 21.115 -19.003 1.00 58.88 O HETATM 2008 O HOH A 380 19.506 22.274 -18.873 1.00 44.67 O HETATM 2009 O HOH A 381 3.141 15.573 -16.457 1.00 57.01 O HETATM 2010 O HOH A 382 2.196 17.639 -17.567 1.00 38.93 O HETATM 2011 O HOH A 383 21.088 5.988 -17.745 1.00 47.22 O CONECT 1706 1846 CONECT 1832 1833 1837 1847 1848 CONECT 1833 1832 1834 CONECT 1834 1833 1835 CONECT 1835 1834 1836 CONECT 1836 1835 1837 1849 CONECT 1837 1832 1836 1838 CONECT 1838 1837 1839 CONECT 1839 1838 1840 CONECT 1840 1839 1841 1850 CONECT 1841 1840 1842 CONECT 1842 1841 1843 CONECT 1843 1842 1844 CONECT 1844 1843 1845 1851 CONECT 1845 1844 1846 CONECT 1846 1706 1845 CONECT 1847 1832 CONECT 1848 1832 CONECT 1849 1836 CONECT 1850 1840 CONECT 1851 1844 CONECT 1852 1853 1863 CONECT 1853 1852 1862 1866 1870 CONECT 1854 1855 1870 CONECT 1855 1854 1856 1878 CONECT 1856 1855 1857 1860 1861 CONECT 1857 1856 1858 1869 CONECT 1858 1857 1859 CONECT 1859 1858 1860 CONECT 1860 1856 1859 1871 CONECT 1861 1856 CONECT 1862 1853 CONECT 1863 1852 1864 CONECT 1864 1863 1865 1876 CONECT 1865 1864 1866 CONECT 1866 1853 1865 1867 CONECT 1867 1866 1868 CONECT 1868 1867 1869 1877 CONECT 1869 1857 1868 1870 CONECT 1870 1853 1854 1869 CONECT 1871 1860 1872 1873 CONECT 1872 1871 CONECT 1873 1871 1874 CONECT 1874 1873 1875 CONECT 1875 1874 CONECT 1876 1864 CONECT 1877 1868 CONECT 1878 1855 MASTER 312 0 2 9 2 0 5 6 1927 1 48 20 END