HEADER IMMUNE SYSTEM 05-MAY-09 3HC3 TITLE BHA10 IGG1 FAB DOUBLE MUTANT VARIANT - ANTIBODY DIRECTED AT HUMAN LTBR COMPND MOL_ID: 1; COMPND 2 MOLECULE: IMMUNOGLOBULIN IGG1 FAB, LIGHT CHAIN; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: IMMUNOGLOBULIN IGG1 FAB, HEAVY CHAIN; COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: CHINESE HAMSTER; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: CHINESE HAMSTER OVARY (CHO); SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 15 EXPRESSION_SYSTEM_CELL_LINE: CHINESE HAMSTER OVARY (CHO) KEYWDS IGG1 FAB, BHA10, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR J.W.ARNDT,J.L.JORDAN,A.LUGOVSKOY,D.WANG REVDAT 3 06-SEP-23 3HC3 1 REMARK LINK REVDAT 2 27-OCT-09 3HC3 1 JRNL REVDAT 1 04-AUG-09 3HC3 0 JRNL AUTH J.L.JORDAN,J.W.ARNDT,K.HANF,G.LI,J.HALL,S.DEMAREST,F.HUANG, JRNL AUTH 2 X.WU,B.MILLER,S.GLASER,E.J.FERNANDEZ,D.WANG,A.LUGOVSKOY JRNL TITL STRUCTURAL UNDERSTANDING OF STABILIZATION PATTERNS IN JRNL TITL 2 ENGINEERED BISPECIFIC IG-LIKE ANTIBODY MOLECULES JRNL REF PROTEINS V. 77 832 2009 JRNL REFN ISSN 0887-3585 JRNL PMID 19626705 JRNL DOI 10.1002/PROT.22502 REMARK 2 REMARK 2 RESOLUTION. 1.72 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.72 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.36 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 59353 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.190 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3171 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.72 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.76 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4073 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.33 REMARK 3 BIN R VALUE (WORKING SET) : 0.2210 REMARK 3 BIN FREE R VALUE SET COUNT : 238 REMARK 3 BIN FREE R VALUE : 0.2560 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3254 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 14 REMARK 3 SOLVENT ATOMS : 423 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.16000 REMARK 3 B22 (A**2) : -0.37000 REMARK 3 B33 (A**2) : 0.54000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.108 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.084 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.052 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.452 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.952 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3475 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2317 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4749 ; 1.348 ; 1.950 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5687 ; 0.832 ; 3.002 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 453 ; 6.427 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 137 ;36.906 ;24.599 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 561 ;12.407 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;21.966 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 527 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3929 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 686 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 530 ; 0.215 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2305 ; 0.196 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1630 ; 0.175 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1891 ; 0.084 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 353 ; 0.172 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 2 ; 0.084 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 13 ; 0.158 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 26 ; 0.192 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 19 ; 0.515 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2318 ; 1.068 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 881 ; 0.323 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3579 ; 1.545 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1439 ; 2.180 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1164 ; 2.999 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 6628 ; 1.082 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 438 ; 5.389 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 5696 ; 1.707 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3HC3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-MAY-09. REMARK 100 THE DEPOSITION ID IS D_1000052951. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-FEB-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : DIAMOND 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62526 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.720 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.72 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.48300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3HC0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 4000, 200 MM CALCIUM ACETATE REMARK 280 10 MM ZINC CHLORIDE AND 100 MM TRIS AT PH 8, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 37.23150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 63.80400 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 61.62650 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 37.23150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 63.80400 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 61.62650 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 37.23150 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 63.80400 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 61.62650 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 37.23150 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 63.80400 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 61.62650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19320 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -88.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH H 276 LIES ON A SPECIAL POSITION. REMARK 375 HOH L 334 LIES ON A SPECIAL POSITION. REMARK 375 HOH L 358 LIES ON A SPECIAL POSITION. REMARK 375 HOH L 393 LIES ON A SPECIAL POSITION. REMARK 375 HOH L 423 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS H 132 REMARK 465 SER H 133 REMARK 465 THR H 134 REMARK 465 SER H 135 REMARK 465 GLY H 136 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL H 56 28.70 49.90 REMARK 500 TRP H 100 108.39 -171.48 REMARK 500 SER H 130 -99.38 -145.96 REMARK 500 ALA L 51 -38.46 67.08 REMARK 500 ALA L 51 -38.46 68.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN L 214 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS H 167 NE2 REMARK 620 2 HOH H 351 O 97.0 REMARK 620 3 ASN L 137 OD1 106.3 87.4 REMARK 620 4 ASN L 138 OD1 91.1 170.9 86.5 REMARK 620 5 ACT L 217 OXT 100.6 88.5 153.1 94.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN L 215 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP L 151 OD1 REMARK 620 2 HIS L 189 ND1 109.3 REMARK 620 3 ACT L 216 OXT 102.7 115.6 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT H 218 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN L 214 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN L 215 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT L 216 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT L 217 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3HC0 RELATED DB: PDB REMARK 900 BHA10 IGG1 WILD-TYPE FAB - ANTIBODY DIRECTED AT HUMAN LTBR REMARK 900 RELATED ID: 3HC4 RELATED DB: PDB REMARK 900 BHA10 IGG1 FAB QUADRUPLE MUTANT VARIANT - ANTIBODY DIRECTED AT REMARK 900 HUMAN LTBR DBREF 3HC3 H 1 217 PDB 3HC3 3HC3 1 217 DBREF 3HC3 L 1 213 PDB 3HC3 3HC3 1 213 SEQRES 1 H 217 GLN VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS SEQRES 2 H 217 PRO GLY GLU SER VAL LYS VAL SER CYS LYS ALA SER GLY SEQRES 3 H 217 TYR THR PHE THR THR TYR TYR LEU HIS TRP VAL ARG GLN SEQRES 4 H 217 ALA PRO GLY GLN GLY LEU GLU TRP MET GLY TRP ILE TYR SEQRES 5 H 217 PRO GLY ASN VAL HIS ALA GLN TYR ASN GLU LYS PHE LYS SEQRES 6 H 217 GLY ARG VAL THR ILE THR ALA ASP LYS SER THR SER THR SEQRES 7 H 217 ALA TYR MET GLU LEU SER SER LEU ARG SER GLU ASP THR SEQRES 8 H 217 ALA VAL TYR TYR CYS ALA ARG SER TRP GLU GLY PHE PRO SEQRES 9 H 217 TYR TRP GLY GLN GLY THR THR VAL THR VAL SER SER ALA SEQRES 10 H 217 SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SEQRES 11 H 217 SER LYS SER THR SER GLY GLY THR ALA ALA LEU GLY CYS SEQRES 12 H 217 LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER SEQRES 13 H 217 TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS THR PHE SEQRES 14 H 217 PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SEQRES 15 H 217 SER VAL VAL THR VAL PRO SER SER SER LEU GLY THR GLN SEQRES 16 H 217 THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR SEQRES 17 H 217 LYS VAL ASP LYS LYS VAL GLU PRO LYS SEQRES 1 L 213 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 L 213 SER VAL GLY ASP ARG VAL THR ILE THR CYS LYS ALA SER SEQRES 3 L 213 GLN ASN VAL GLY ILE ASN VAL ALA TRP TYR GLN GLN LYS SEQRES 4 L 213 PRO GLY LYS ALA PRO LYS LEU LEU ILE SER SER ALA SER SEQRES 5 L 213 TYR ARG TYR SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 213 GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 L 213 GLN PRO GLU ASP PHE ALA THR TYR PHE CYS GLN GLN TYR SEQRES 8 L 213 ASP THR TYR PRO PHE THR PHE GLY GLN GLY THR LYS VAL SEQRES 9 L 213 GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 L 213 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 L 213 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 L 213 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 L 213 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 L 213 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 L 213 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 L 213 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 L 213 PHE ASN ARG GLY GLU HET ACT H 218 4 HET ZN L 214 1 HET ZN L 215 1 HET ACT L 216 4 HET ACT L 217 4 HETNAM ACT ACETATE ION HETNAM ZN ZINC ION FORMUL 3 ACT 3(C2 H3 O2 1-) FORMUL 4 ZN 2(ZN 2+) FORMUL 8 HOH *423(H2 O) HELIX 1 1 THR H 28 TYR H 32 5 5 HELIX 2 2 GLU H 62 LYS H 65 5 4 HELIX 3 3 ARG H 87 THR H 91 5 5 HELIX 4 4 SER H 159 ALA H 161 5 3 HELIX 5 5 SER H 190 LEU H 192 5 3 HELIX 6 6 LYS H 204 ASN H 207 5 4 HELIX 7 7 GLN L 79 PHE L 83 5 5 HELIX 8 8 SER L 121 SER L 127 1 7 HELIX 9 9 LYS L 183 GLU L 187 1 5 SHEET 1 A 4 GLN H 3 GLN H 6 0 SHEET 2 A 4 VAL H 18 SER H 25 -1 O LYS H 23 N VAL H 5 SHEET 3 A 4 THR H 78 LEU H 83 -1 O MET H 81 N VAL H 20 SHEET 4 A 4 VAL H 68 ASP H 73 -1 N ASP H 73 O THR H 78 SHEET 1 B 6 GLU H 10 LYS H 12 0 SHEET 2 B 6 THR H 110 VAL H 114 1 O THR H 113 N LYS H 12 SHEET 3 B 6 ALA H 92 ARG H 98 -1 N TYR H 94 O THR H 110 SHEET 4 B 6 LEU H 34 ALA H 40 -1 N VAL H 37 O TYR H 95 SHEET 5 B 6 GLY H 44 ILE H 51 -1 O GLU H 46 N ARG H 38 SHEET 6 B 6 ALA H 58 TYR H 60 -1 O GLN H 59 N TRP H 50 SHEET 1 C 4 GLU H 10 LYS H 12 0 SHEET 2 C 4 THR H 110 VAL H 114 1 O THR H 113 N LYS H 12 SHEET 3 C 4 ALA H 92 ARG H 98 -1 N TYR H 94 O THR H 110 SHEET 4 C 4 TYR H 105 TRP H 106 -1 O TYR H 105 N ARG H 98 SHEET 1 D 4 SER H 123 LEU H 127 0 SHEET 2 D 4 THR H 138 TYR H 148 -1 O GLY H 142 N LEU H 127 SHEET 3 D 4 TYR H 179 PRO H 188 -1 O VAL H 187 N ALA H 139 SHEET 4 D 4 VAL H 166 THR H 168 -1 N HIS H 167 O VAL H 184 SHEET 1 E 4 SER H 123 LEU H 127 0 SHEET 2 E 4 THR H 138 TYR H 148 -1 O GLY H 142 N LEU H 127 SHEET 3 E 4 TYR H 179 PRO H 188 -1 O VAL H 187 N ALA H 139 SHEET 4 E 4 VAL H 172 LEU H 173 -1 N VAL H 172 O SER H 180 SHEET 1 F 3 THR H 154 TRP H 157 0 SHEET 2 F 3 ILE H 198 HIS H 203 -1 O ASN H 200 N SER H 156 SHEET 3 F 3 THR H 208 LYS H 213 -1 O VAL H 210 N VAL H 201 SHEET 1 G 4 MET L 4 SER L 7 0 SHEET 2 G 4 VAL L 19 ALA L 25 -1 O THR L 22 N SER L 7 SHEET 3 G 4 ASP L 70 ILE L 75 -1 O LEU L 73 N ILE L 21 SHEET 4 G 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 H 6 SER L 10 ALA L 13 0 SHEET 2 H 6 THR L 102 ILE L 106 1 O GLU L 105 N LEU L 11 SHEET 3 H 6 ALA L 84 GLN L 90 -1 N ALA L 84 O VAL L 104 SHEET 4 H 6 VAL L 33 GLN L 38 -1 N GLN L 38 O THR L 85 SHEET 5 H 6 LYS L 45 SER L 49 -1 O LEU L 47 N TRP L 35 SHEET 6 H 6 TYR L 53 ARG L 54 -1 O TYR L 53 N SER L 49 SHEET 1 I 4 SER L 10 ALA L 13 0 SHEET 2 I 4 THR L 102 ILE L 106 1 O GLU L 105 N LEU L 11 SHEET 3 I 4 ALA L 84 GLN L 90 -1 N ALA L 84 O VAL L 104 SHEET 4 I 4 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SHEET 1 J 4 SER L 114 PHE L 118 0 SHEET 2 J 4 THR L 129 PHE L 139 -1 O LEU L 135 N PHE L 116 SHEET 3 J 4 TYR L 173 SER L 182 -1 O TYR L 173 N PHE L 139 SHEET 4 J 4 SER L 159 VAL L 163 -1 N SER L 162 O SER L 176 SHEET 1 K 4 ALA L 153 LEU L 154 0 SHEET 2 K 4 LYS L 145 VAL L 150 -1 N VAL L 150 O ALA L 153 SHEET 3 K 4 VAL L 191 THR L 197 -1 O GLU L 195 N GLN L 147 SHEET 4 K 4 VAL L 205 ASN L 210 -1 O VAL L 205 N VAL L 196 SSBOND 1 CYS H 22 CYS H 96 1555 1555 2.10 SSBOND 2 CYS H 143 CYS H 199 1555 1555 2.05 SSBOND 3 CYS L 23 CYS L 88 1555 1555 2.58 SSBOND 4 CYS L 134 CYS L 194 1555 1555 2.09 LINK NE2 HIS H 167 ZN ZN L 214 1555 1555 2.13 LINK O HOH H 351 ZN ZN L 214 1555 1555 2.26 LINK OD1 ASN L 137 ZN ZN L 214 1555 1555 2.05 LINK OD1 ASN L 138 ZN ZN L 214 1555 1555 2.12 LINK OD1 ASP L 151 ZN ZN L 215 1555 1555 1.93 LINK ND1 HIS L 189 ZN ZN L 215 1555 1555 2.09 LINK ZN ZN L 214 OXT ACT L 217 1555 1555 2.10 LINK ZN ZN L 215 OXT ACT L 216 1555 1555 1.95 CISPEP 1 PHE H 149 PRO H 150 0 -9.63 CISPEP 2 GLU H 151 PRO H 152 0 -2.89 CISPEP 3 SER L 7 PRO L 8 0 -6.24 CISPEP 4 TYR L 94 PRO L 95 0 -2.85 CISPEP 5 TYR L 140 PRO L 141 0 2.92 SITE 1 AC1 8 TYR H 33 HIS H 35 TRP H 50 SER H 99 SITE 2 AC1 8 HOH H 264 HOH H 392 HOH H 406 TYR L 94 SITE 1 AC2 5 HIS H 167 HOH H 351 ASN L 137 ASN L 138 SITE 2 AC2 5 ACT L 217 SITE 1 AC3 4 HIS H 57 ASP L 151 HIS L 189 ACT L 216 SITE 1 AC4 9 TYR H 33 TRP H 50 ASN H 55 HIS H 57 SITE 2 AC4 9 HOH H 244 ASP L 151 HIS L 189 ZN L 215 SITE 3 AC4 9 HOH L 347 SITE 1 AC5 8 GLY H 165 HIS H 167 THR H 186 HOH H 351 SITE 2 AC5 8 ASN L 137 ASN L 138 ZN L 214 HOH L 400 CRYST1 74.463 127.608 123.253 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013430 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007836 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008113 0.00000