HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 07-MAY-09 3HDG TITLE CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF AN UNCHARACTERIZED TITLE 2 PROTEIN (WS1339) FROM WOLINELLA SUCCINOGENES COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B, D, E; COMPND 4 FRAGMENT: N-TERMINAL DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: WOLINELLA SUCCINOGENES; SOURCE 3 ORGANISM_TAXID: 844; SOURCE 4 GENE: WS1339; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: BC-PSGX3 (BC) KEYWDS TWO-COMPONENT SENSOR ACTIVITY, RESPONSE REGULATOR, PSI-II, 11227F, KEYWDS 2 NYSGXRC, STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, NEW YORK KEYWDS 3 SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR S.ESWARAMOORTHY,S.K.BURLEY,S.SWAMINATHAN,NEW YORK SGX RESEARCH CENTER AUTHOR 2 FOR STRUCTURAL GENOMICS (NYSGXRC) REVDAT 2 10-FEB-21 3HDG 1 AUTHOR JRNL REMARK LINK REVDAT 1 19-MAY-09 3HDG 0 JRNL AUTH S.ESWARAMOORTHY,S.K.BURLEY,S.SWAMINATHAN JRNL TITL CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF AN JRNL TITL 2 UNCHARACTERIZED PROTEIN (WS1339) FROM WOLINELLA SUCCINOGENES JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.27 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.27 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.53 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.2 REMARK 3 NUMBER OF REFLECTIONS : 23752 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.223 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 923 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.27 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.41 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 84.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2650 REMARK 3 BIN FREE R VALUE : 0.3180 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 132 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 9.028 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3870 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 113 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.02000 REMARK 3 B22 (A**2) : -0.11000 REMARK 3 B33 (A**2) : -2.92000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.37000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.29 REMARK 3 ESD FROM SIGMAA (A) : 0.23 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.37 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.20 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3HDG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-MAY-09. REMARK 100 THE DEPOSITION ID IS D_1000052998. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-APR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9790 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24794 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.270 REMARK 200 RESOLUTION RANGE LOW (A) : 40.220 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : 0.10700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.27 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.35 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.6 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.56000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX & SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG MME 550, 50MM MAGNESIUM REMARK 280 CHLORIDE, 100MM HEPES PH 7.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 38.52950 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 16.46924 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 -73.25860 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 2 REMARK 465 SER A 3 REMARK 465 LEU A 4 REMARK 465 ARG A 5 REMARK 465 GLU A 6 REMARK 465 VAL A 7 REMARK 465 GLY A 132 REMARK 465 HIS A 133 REMARK 465 HIS A 134 REMARK 465 HIS A 135 REMARK 465 HIS A 136 REMARK 465 HIS A 137 REMARK 465 HIS A 138 REMARK 465 MSE B 2 REMARK 465 SER B 3 REMARK 465 LEU B 4 REMARK 465 ARG B 5 REMARK 465 GLU B 6 REMARK 465 ALA B 88 REMARK 465 PHE B 89 REMARK 465 GLY B 132 REMARK 465 HIS B 133 REMARK 465 HIS B 134 REMARK 465 HIS B 135 REMARK 465 HIS B 136 REMARK 465 HIS B 137 REMARK 465 HIS B 138 REMARK 465 MSE D 2 REMARK 465 SER D 3 REMARK 465 LEU D 4 REMARK 465 ARG D 5 REMARK 465 GLU D 6 REMARK 465 VAL D 7 REMARK 465 GLY D 132 REMARK 465 HIS D 133 REMARK 465 HIS D 134 REMARK 465 HIS D 135 REMARK 465 HIS D 136 REMARK 465 HIS D 137 REMARK 465 HIS D 138 REMARK 465 MSE E 2 REMARK 465 SER E 3 REMARK 465 LEU E 4 REMARK 465 ARG E 5 REMARK 465 GLU E 6 REMARK 465 VAL E 7 REMARK 465 GLY E 132 REMARK 465 HIS E 133 REMARK 465 HIS E 134 REMARK 465 HIS E 135 REMARK 465 HIS E 136 REMARK 465 HIS E 137 REMARK 465 HIS E 138 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 90 OG REMARK 470 LYS A 93 CG CD CE NZ REMARK 470 LYS B 93 CG CD CE NZ REMARK 470 ARG B 115 CG CD NE CZ NH1 NH2 REMARK 470 SER D 90 OG REMARK 470 GLU D 91 CG CD OE1 OE2 REMARK 470 LYS D 93 CG CD CE NZ REMARK 470 LYS D 109 CG CD CE NZ REMARK 470 SER E 90 OG REMARK 470 GLU E 91 CG CD OE1 OE2 REMARK 470 LYS E 93 CG CD CE NZ REMARK 470 TYR E 94 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ILE E 96 CG1 CG2 CD1 REMARK 470 LYS E 109 CG CD CE NZ REMARK 470 ARG E 115 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 52 67.57 33.66 REMARK 500 LYS A 64 -59.21 64.85 REMARK 500 ALA A 88 64.90 -102.34 REMARK 500 LEU A 105 133.85 -177.17 REMARK 500 ALA B 52 67.58 33.95 REMARK 500 ILE B 60 -62.58 -103.35 REMARK 500 LYS B 64 -55.80 64.37 REMARK 500 ALA B 76 47.28 -90.81 REMARK 500 ILE D 60 -70.45 -86.18 REMARK 500 LYS D 64 -58.29 64.77 REMARK 500 ALA D 88 -29.21 -157.01 REMARK 500 PHE D 89 151.15 -39.28 REMARK 500 LEU D 105 145.90 -172.34 REMARK 500 ALA E 52 72.21 42.57 REMARK 500 ILE E 60 -68.64 -99.93 REMARK 500 LYS E 64 -58.68 65.67 REMARK 500 LEU E 105 142.97 -171.20 REMARK 500 LEU E 107 74.63 -118.70 REMARK 500 LYS E 130 40.32 -104.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 1 O REMARK 620 2 ASP A 17 OD1 107.2 REMARK 620 3 GLU B 15 OE2 163.6 88.9 REMARK 620 4 ASP B 16 OD1 92.7 94.9 82.7 REMARK 620 5 ASP B 59 OD2 78.2 164.0 87.1 99.9 REMARK 620 6 HOH B 139 O 92.7 93.5 89.2 168.2 70.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 15 OE2 REMARK 620 2 ASP A 16 OD1 85.4 REMARK 620 3 ASP A 59 OD2 100.4 92.2 REMARK 620 4 HOH A 139 O 172.1 90.5 86.6 REMARK 620 5 HOH A 140 O 99.9 174.2 84.8 84.4 REMARK 620 6 ASP B 17 OD1 79.7 94.8 173.0 93.9 88.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 203 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 15 OE2 REMARK 620 2 ASP D 16 OD1 90.8 REMARK 620 3 ASP D 59 OD2 100.7 96.1 REMARK 620 4 HOH D 141 O 170.8 80.8 76.8 REMARK 620 5 HOH D 142 O 97.8 171.3 83.3 90.7 REMARK 620 6 ASP E 17 OD1 107.4 90.0 151.1 76.4 86.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG E 204 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 17 OD1 REMARK 620 2 HOH D 139 O 126.0 REMARK 620 3 HOH D 140 O 57.9 122.4 REMARK 620 4 ASP E 16 OD1 90.5 124.8 111.8 REMARK 620 5 ASP E 59 OD2 141.5 84.7 87.1 88.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG E 204 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-11227F RELATED DB: TARGETDB DBREF 3HDG A 5 130 UNP Q7MRH8 Q7MRH8_WOLSU 5 130 DBREF 3HDG B 5 130 UNP Q7MRH8 Q7MRH8_WOLSU 5 130 DBREF 3HDG D 5 130 UNP Q7MRH8 Q7MRH8_WOLSU 5 130 DBREF 3HDG E 5 130 UNP Q7MRH8 Q7MRH8_WOLSU 5 130 SEQADV 3HDG MSE A 2 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG SER A 3 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG LEU A 4 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG GLU A 131 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG GLY A 132 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG HIS A 133 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG HIS A 134 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG HIS A 135 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG HIS A 136 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG HIS A 137 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG HIS A 138 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG MSE B 2 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG SER B 3 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG LEU B 4 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG GLU B 131 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG GLY B 132 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG HIS B 133 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG HIS B 134 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG HIS B 135 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG HIS B 136 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG HIS B 137 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG HIS B 138 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG MSE D 2 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG SER D 3 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG LEU D 4 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG GLU D 131 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG GLY D 132 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG HIS D 133 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG HIS D 134 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG HIS D 135 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG HIS D 136 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG HIS D 137 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG HIS D 138 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG MSE E 2 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG SER E 3 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG LEU E 4 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG GLU E 131 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG GLY E 132 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG HIS E 133 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG HIS E 134 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG HIS E 135 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG HIS E 136 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG HIS E 137 UNP Q7MRH8 EXPRESSION TAG SEQADV 3HDG HIS E 138 UNP Q7MRH8 EXPRESSION TAG SEQRES 1 A 137 MSE SER LEU ARG GLU VAL ALA LEU LYS ILE LEU ILE VAL SEQRES 2 A 137 GLU ASP ASP THR ASP ALA ARG GLU TRP LEU SER THR ILE SEQRES 3 A 137 ILE SER ASN HIS PHE PRO GLU VAL TRP SER ALA GLY ASP SEQRES 4 A 137 GLY GLU GLU GLY GLU ARG LEU PHE GLY LEU HIS ALA PRO SEQRES 5 A 137 ASP VAL ILE ILE THR ASP ILE ARG MSE PRO LYS LEU GLY SEQRES 6 A 137 GLY LEU GLU MSE LEU ASP ARG ILE LYS ALA GLY GLY ALA SEQRES 7 A 137 LYS PRO TYR VAL ILE VAL ILE SER ALA PHE SER GLU MSE SEQRES 8 A 137 LYS TYR PHE ILE LYS ALA ILE GLU LEU GLY VAL HIS LEU SEQRES 9 A 137 PHE LEU PRO LYS PRO ILE GLU PRO GLY ARG LEU MSE GLU SEQRES 10 A 137 THR LEU GLU ASP PHE ARG HIS ILE LYS LEU ALA LYS GLU SEQRES 11 A 137 GLY HIS HIS HIS HIS HIS HIS SEQRES 1 B 137 MSE SER LEU ARG GLU VAL ALA LEU LYS ILE LEU ILE VAL SEQRES 2 B 137 GLU ASP ASP THR ASP ALA ARG GLU TRP LEU SER THR ILE SEQRES 3 B 137 ILE SER ASN HIS PHE PRO GLU VAL TRP SER ALA GLY ASP SEQRES 4 B 137 GLY GLU GLU GLY GLU ARG LEU PHE GLY LEU HIS ALA PRO SEQRES 5 B 137 ASP VAL ILE ILE THR ASP ILE ARG MSE PRO LYS LEU GLY SEQRES 6 B 137 GLY LEU GLU MSE LEU ASP ARG ILE LYS ALA GLY GLY ALA SEQRES 7 B 137 LYS PRO TYR VAL ILE VAL ILE SER ALA PHE SER GLU MSE SEQRES 8 B 137 LYS TYR PHE ILE LYS ALA ILE GLU LEU GLY VAL HIS LEU SEQRES 9 B 137 PHE LEU PRO LYS PRO ILE GLU PRO GLY ARG LEU MSE GLU SEQRES 10 B 137 THR LEU GLU ASP PHE ARG HIS ILE LYS LEU ALA LYS GLU SEQRES 11 B 137 GLY HIS HIS HIS HIS HIS HIS SEQRES 1 D 137 MSE SER LEU ARG GLU VAL ALA LEU LYS ILE LEU ILE VAL SEQRES 2 D 137 GLU ASP ASP THR ASP ALA ARG GLU TRP LEU SER THR ILE SEQRES 3 D 137 ILE SER ASN HIS PHE PRO GLU VAL TRP SER ALA GLY ASP SEQRES 4 D 137 GLY GLU GLU GLY GLU ARG LEU PHE GLY LEU HIS ALA PRO SEQRES 5 D 137 ASP VAL ILE ILE THR ASP ILE ARG MSE PRO LYS LEU GLY SEQRES 6 D 137 GLY LEU GLU MSE LEU ASP ARG ILE LYS ALA GLY GLY ALA SEQRES 7 D 137 LYS PRO TYR VAL ILE VAL ILE SER ALA PHE SER GLU MSE SEQRES 8 D 137 LYS TYR PHE ILE LYS ALA ILE GLU LEU GLY VAL HIS LEU SEQRES 9 D 137 PHE LEU PRO LYS PRO ILE GLU PRO GLY ARG LEU MSE GLU SEQRES 10 D 137 THR LEU GLU ASP PHE ARG HIS ILE LYS LEU ALA LYS GLU SEQRES 11 D 137 GLY HIS HIS HIS HIS HIS HIS SEQRES 1 E 137 MSE SER LEU ARG GLU VAL ALA LEU LYS ILE LEU ILE VAL SEQRES 2 E 137 GLU ASP ASP THR ASP ALA ARG GLU TRP LEU SER THR ILE SEQRES 3 E 137 ILE SER ASN HIS PHE PRO GLU VAL TRP SER ALA GLY ASP SEQRES 4 E 137 GLY GLU GLU GLY GLU ARG LEU PHE GLY LEU HIS ALA PRO SEQRES 5 E 137 ASP VAL ILE ILE THR ASP ILE ARG MSE PRO LYS LEU GLY SEQRES 6 E 137 GLY LEU GLU MSE LEU ASP ARG ILE LYS ALA GLY GLY ALA SEQRES 7 E 137 LYS PRO TYR VAL ILE VAL ILE SER ALA PHE SER GLU MSE SEQRES 8 E 137 LYS TYR PHE ILE LYS ALA ILE GLU LEU GLY VAL HIS LEU SEQRES 9 E 137 PHE LEU PRO LYS PRO ILE GLU PRO GLY ARG LEU MSE GLU SEQRES 10 E 137 THR LEU GLU ASP PHE ARG HIS ILE LYS LEU ALA LYS GLU SEQRES 11 E 137 GLY HIS HIS HIS HIS HIS HIS MODRES 3HDG MSE A 62 MET SELENOMETHIONINE MODRES 3HDG MSE A 70 MET SELENOMETHIONINE MODRES 3HDG MSE A 92 MET SELENOMETHIONINE MODRES 3HDG MSE A 117 MET SELENOMETHIONINE MODRES 3HDG MSE B 62 MET SELENOMETHIONINE MODRES 3HDG MSE B 70 MET SELENOMETHIONINE MODRES 3HDG MSE B 92 MET SELENOMETHIONINE MODRES 3HDG MSE B 117 MET SELENOMETHIONINE MODRES 3HDG MSE D 62 MET SELENOMETHIONINE MODRES 3HDG MSE D 70 MET SELENOMETHIONINE MODRES 3HDG MSE D 92 MET SELENOMETHIONINE MODRES 3HDG MSE D 117 MET SELENOMETHIONINE MODRES 3HDG MSE E 62 MET SELENOMETHIONINE MODRES 3HDG MSE E 70 MET SELENOMETHIONINE MODRES 3HDG MSE E 92 MET SELENOMETHIONINE MODRES 3HDG MSE E 117 MET SELENOMETHIONINE HET MSE A 62 8 HET MSE A 70 8 HET MSE A 92 8 HET MSE A 117 8 HET MSE B 62 8 HET MSE B 70 8 HET MSE B 92 8 HET MSE B 117 8 HET MSE D 62 8 HET MSE D 70 8 HET MSE D 92 8 HET MSE D 117 8 HET MSE E 62 8 HET MSE E 70 8 HET MSE E 92 8 HET MSE E 117 8 HET MG A 202 1 HET MG B 201 1 HET MG D 203 1 HET MG E 204 1 HETNAM MSE SELENOMETHIONINE HETNAM MG MAGNESIUM ION FORMUL 1 MSE 16(C5 H11 N O2 SE) FORMUL 5 MG 4(MG 2+) FORMUL 9 HOH *113(H2 O) HELIX 1 1 ASP A 17 ASN A 30 1 14 HELIX 2 2 ASP A 40 ALA A 52 1 13 HELIX 3 3 GLY A 66 GLY A 77 1 12 HELIX 4 4 GLU A 91 GLY A 102 1 12 HELIX 5 5 GLU A 112 GLU A 131 1 20 HELIX 6 6 ASP B 17 ASN B 30 1 14 HELIX 7 7 ASP B 40 ALA B 52 1 13 HELIX 8 8 GLY B 66 ALA B 76 1 11 HELIX 9 9 GLU B 91 GLY B 102 1 12 HELIX 10 10 GLU B 112 ALA B 129 1 18 HELIX 11 11 ASP D 17 PHE D 32 1 16 HELIX 12 12 ASP D 40 ALA D 52 1 13 HELIX 13 13 GLY D 66 GLY D 77 1 12 HELIX 14 14 GLU D 91 LEU D 101 1 11 HELIX 15 15 GLU D 112 LEU D 128 1 17 HELIX 16 16 ASP E 17 PHE E 32 1 16 HELIX 17 17 ASP E 40 ALA E 52 1 13 HELIX 18 18 GLY E 66 GLY E 77 1 12 HELIX 19 19 GLU E 91 GLY E 102 1 12 HELIX 20 20 GLU E 112 LYS E 130 1 19 SHEET 1 A 5 VAL A 35 ALA A 38 0 SHEET 2 A 5 ILE A 11 VAL A 14 1 N ILE A 13 O ALA A 38 SHEET 3 A 5 VAL A 55 THR A 58 1 O ILE A 57 N VAL A 14 SHEET 4 A 5 TYR A 82 VAL A 85 1 O ILE A 84 N ILE A 56 SHEET 5 A 5 LEU A 105 PHE A 106 1 O LEU A 105 N VAL A 85 SHEET 1 B 5 VAL B 35 ALA B 38 0 SHEET 2 B 5 ILE B 11 VAL B 14 1 N ILE B 13 O ALA B 38 SHEET 3 B 5 VAL B 55 THR B 58 1 O ILE B 57 N VAL B 14 SHEET 4 B 5 TYR B 82 ILE B 86 1 O ILE B 84 N ILE B 56 SHEET 5 B 5 LEU B 105 LEU B 107 1 O LEU B 107 N VAL B 85 SHEET 1 C 5 VAL D 35 ALA D 38 0 SHEET 2 C 5 ILE D 11 VAL D 14 1 N ILE D 13 O TRP D 36 SHEET 3 C 5 VAL D 55 ASP D 59 1 O ILE D 57 N VAL D 14 SHEET 4 C 5 TYR D 82 SER D 87 1 O ILE D 84 N ILE D 56 SHEET 5 C 5 LEU D 105 PRO D 108 1 O LEU D 105 N VAL D 85 SHEET 1 D 5 VAL E 35 ALA E 38 0 SHEET 2 D 5 ILE E 11 VAL E 14 1 N ILE E 13 O TRP E 36 SHEET 3 D 5 VAL E 55 THR E 58 1 O ILE E 57 N LEU E 12 SHEET 4 D 5 TYR E 82 VAL E 85 1 O TYR E 82 N ILE E 56 SHEET 5 D 5 LEU E 105 PHE E 106 1 O LEU E 105 N VAL E 85 LINK C ARG A 61 N MSE A 62 1555 1555 1.33 LINK C MSE A 62 N PRO A 63 1555 1555 1.34 LINK C GLU A 69 N MSE A 70 1555 1555 1.33 LINK C MSE A 70 N LEU A 71 1555 1555 1.33 LINK C GLU A 91 N MSE A 92 1555 1555 1.33 LINK C MSE A 92 N LYS A 93 1555 1555 1.33 LINK C LEU A 116 N MSE A 117 1555 1555 1.33 LINK C MSE A 117 N GLU A 118 1555 1555 1.33 LINK C ARG B 61 N MSE B 62 1555 1555 1.33 LINK C MSE B 62 N PRO B 63 1555 1555 1.34 LINK C GLU B 69 N MSE B 70 1555 1555 1.33 LINK C MSE B 70 N LEU B 71 1555 1555 1.33 LINK C GLU B 91 N MSE B 92 1555 1555 1.33 LINK C MSE B 92 N LYS B 93 1555 1555 1.33 LINK C LEU B 116 N MSE B 117 1555 1555 1.33 LINK C MSE B 117 N GLU B 118 1555 1555 1.33 LINK C ARG D 61 N MSE D 62 1555 1555 1.33 LINK C MSE D 62 N PRO D 63 1555 1555 1.34 LINK C GLU D 69 N MSE D 70 1555 1555 1.33 LINK C MSE D 70 N LEU D 71 1555 1555 1.33 LINK C GLU D 91 N MSE D 92 1555 1555 1.33 LINK C MSE D 92 N LYS D 93 1555 1555 1.33 LINK C LEU D 116 N MSE D 117 1555 1555 1.33 LINK C MSE D 117 N GLU D 118 1555 1555 1.33 LINK C ARG E 61 N MSE E 62 1555 1555 1.33 LINK C MSE E 62 N PRO E 63 1555 1555 1.35 LINK C GLU E 69 N MSE E 70 1555 1555 1.33 LINK C MSE E 70 N LEU E 71 1555 1555 1.33 LINK C GLU E 91 N MSE E 92 1555 1555 1.33 LINK C MSE E 92 N LYS E 93 1555 1555 1.33 LINK C LEU E 116 N MSE E 117 1555 1555 1.33 LINK C MSE E 117 N GLU E 118 1555 1555 1.33 LINK O HOH A 1 MG MG B 201 1555 1555 2.33 LINK OE2 GLU A 15 MG MG A 202 1555 1555 2.31 LINK OD1 ASP A 16 MG MG A 202 1555 1555 1.93 LINK OD1 ASP A 17 MG MG B 201 1555 1555 1.92 LINK OD2 ASP A 59 MG MG A 202 1555 1555 1.97 LINK O HOH A 139 MG MG A 202 1555 1555 2.19 LINK O HOH A 140 MG MG A 202 1555 1555 1.98 LINK MG MG A 202 OD1 ASP B 17 1555 1555 1.95 LINK OE2 GLU B 15 MG MG B 201 1555 1555 2.12 LINK OD1 ASP B 16 MG MG B 201 1555 1555 2.05 LINK OD2 ASP B 59 MG MG B 201 1555 1555 2.01 LINK O HOH B 139 MG MG B 201 1555 1555 2.23 LINK OE2 GLU D 15 MG MG D 203 1555 1555 1.80 LINK OD1 ASP D 16 MG MG D 203 1555 1555 2.19 LINK OD1 ASP D 17 MG MG E 204 1555 1555 2.41 LINK OD2 ASP D 59 MG MG D 203 1555 1555 2.07 LINK O HOH D 139 MG MG E 204 1555 1555 1.82 LINK O HOH D 140 MG MG E 204 1555 1555 2.09 LINK O HOH D 141 MG MG D 203 1555 1555 1.93 LINK O HOH D 142 MG MG D 203 1555 1555 1.97 LINK MG MG D 203 OD1 ASP E 17 1555 1555 2.29 LINK OD1 ASP E 16 MG MG E 204 1555 1555 1.78 LINK OD2 ASP E 59 MG MG E 204 1555 1555 2.41 CISPEP 1 LYS A 109 PRO A 110 0 -0.24 CISPEP 2 LYS B 109 PRO B 110 0 0.48 CISPEP 3 LYS D 109 PRO D 110 0 0.37 CISPEP 4 LYS E 109 PRO E 110 0 0.23 SITE 1 AC1 6 GLU A 15 ASP A 16 ASP A 59 HOH A 139 SITE 2 AC1 6 HOH A 140 ASP B 17 SITE 1 AC2 6 HOH A 1 ASP A 17 GLU B 15 ASP B 16 SITE 2 AC2 6 ASP B 59 HOH B 139 SITE 1 AC3 6 GLU D 15 ASP D 16 ASP D 59 HOH D 141 SITE 2 AC3 6 HOH D 142 ASP E 17 SITE 1 AC4 6 ASP D 17 HOH D 139 HOH D 140 GLU E 15 SITE 2 AC4 6 ASP E 16 ASP E 59 CRYST1 48.331 77.059 75.087 90.00 102.67 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020691 0.000000 0.004651 0.00000 SCALE2 0.000000 0.012977 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013650 0.00000