HEADER HYDROLASE 07-MAY-09 3HDI TITLE CRYSTAL STRUCTURE OF BACILLUS HALODURANS METALLO PEPTIDASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROCESSING PROTEASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: SYNTHETIC PEPTIDE; COMPND 7 CHAIN: C, D; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS HALODURANS C-125; SOURCE 3 ORGANISM_TAXID: 272558; SOURCE 4 STRAIN: C-125 / DSM 18197 / FERM 7344 / JCM 9153; SOURCE 5 ATCC: BAA-125; SOURCE 6 GENE: BH2405; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)RIL; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 OTHER_DETAILS: SYNTHETIC PEPTIDE KEYWDS CAGE STRUCTURE, M16B PEPTIDASE, METALLOPEPTIDASE, PEPTIDASOME, KEYWDS 2 PROTEASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.ALESHIN,S.GRAMATIKOVA,A.Y.STRONGIN,B.STEC,R.C.LIDDINGTON,J.W.SMITH REVDAT 2 06-SEP-23 3HDI 1 REMARK SEQADV LINK REVDAT 1 08-DEC-09 3HDI 0 JRNL AUTH A.E.ALESHIN,S.GRAMATIKOVA,G.L.HURA,A.BOBKOV,A.Y.STRONGIN, JRNL AUTH 2 B.STEC,J.A.TAINER,R.C.LIDDINGTON,J.W.SMITH JRNL TITL CRYSTAL AND SOLUTION STRUCTURES OF A PROKARYOTIC M16B JRNL TITL 2 PEPTIDASE: AN OPEN AND SHUT CASE. JRNL REF STRUCTURE V. 17 1465 2009 JRNL REFN ISSN 0969-2126 JRNL PMID 19913481 JRNL DOI 10.1016/J.STR.2009.09.009 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 89.0 REMARK 3 NUMBER OF REFLECTIONS : 27312 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.269 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.80 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3720 REMARK 3 BIN FREE R VALUE : 0.4610 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 72 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6697 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 32 REMARK 3 SOLVENT ATOMS : 259 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.267 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3HDI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-MAY-09. REMARK 100 THE DEPOSITION ID IS D_1000052999. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JAN-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28541 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.70 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 2.40 REMARK 200 R MERGE FOR SHELL (I) : 0.66000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1HR6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5 MICROLITER DROPS, 15 MG/ML PROTEIN REMARK 280 IN 25 MM HEPES, 50 MM NACL, MIXED WITH 100 MM MES PH 6.5, 5 MM REMARK 280 COCL2, 1.8 M AMMONIUM SULFATE, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.78350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 62.78350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 45.57050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 96.99050 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 45.57050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 96.99050 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 62.78350 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 45.57050 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 96.99050 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 62.78350 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 45.57050 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 96.99050 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32320 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.2 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 462 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 536 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 546 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 HIS A 416 REMARK 465 HIS A 417 REMARK 465 HIS A 418 REMARK 465 HIS A 419 REMARK 465 HIS A 420 REMARK 465 HIS A 421 REMARK 465 MET B 1 REMARK 465 HIS B 416 REMARK 465 HIS B 417 REMARK 465 HIS B 418 REMARK 465 HIS B 419 REMARK 465 HIS B 420 REMARK 465 HIS B 421 REMARK 465 ALA C 1 REMARK 465 ALA C 2 REMARK 465 ALA C 3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 39 -70.84 -16.86 REMARK 500 SER A 80 -162.04 -111.29 REMARK 500 ASP A 92 -48.68 -27.61 REMARK 500 HIS A 94 -2.63 -140.96 REMARK 500 HIS A 108 31.06 -91.88 REMARK 500 PHE A 111 52.82 -65.18 REMARK 500 THR A 133 77.66 -118.43 REMARK 500 PRO A 223 48.73 -72.37 REMARK 500 ILE A 246 -55.28 -25.40 REMARK 500 ASP A 248 137.44 -29.00 REMARK 500 ASP A 250 34.95 -87.89 REMARK 500 PHE A 290 -165.41 -117.06 REMARK 500 MET A 295 144.32 -172.88 REMARK 500 LEU A 369 -71.46 -53.87 REMARK 500 ALA A 394 159.58 -47.78 REMARK 500 PRO A 408 -132.52 -75.36 REMARK 500 ALA A 410 58.97 -111.53 REMARK 500 HIS A 413 55.47 -113.10 REMARK 500 ALA B 39 -63.63 -8.59 REMARK 500 THR B 56 -165.68 -128.16 REMARK 500 GLN B 74 31.81 -72.68 REMARK 500 ASN B 76 165.05 177.57 REMARK 500 SER B 80 -164.63 -122.40 REMARK 500 PHE B 107 -68.18 -93.50 REMARK 500 HIS B 108 39.50 -87.19 REMARK 500 PHE B 111 63.45 -103.28 REMARK 500 GLN B 112 154.25 -45.56 REMARK 500 ASN B 164 -15.29 -48.97 REMARK 500 PRO B 223 46.19 -75.16 REMARK 500 GLU B 231 94.32 -62.00 REMARK 500 LEU B 261 -70.73 -65.25 REMARK 500 GLN B 306 15.51 -65.29 REMARK 500 LYS B 364 -13.00 68.17 REMARK 500 ILE B 412 -90.48 -142.91 REMARK 500 LEU B 414 76.96 -174.52 REMARK 500 ALA C 6 55.08 -114.96 REMARK 500 ALA C 8 -119.85 -67.39 REMARK 500 ALA C 9 -140.86 -108.51 REMARK 500 ALA C 12 32.11 -173.22 REMARK 500 ALA C 13 11.93 -144.64 REMARK 500 ALA C 15 -73.50 -79.95 REMARK 500 ALA D 2 -53.97 -120.12 REMARK 500 ALA D 3 100.83 -35.88 REMARK 500 ALA D 5 -129.36 -100.90 REMARK 500 ALA D 6 54.04 -168.93 REMARK 500 ALA D 8 -136.55 -111.45 REMARK 500 ALA D 10 97.72 -176.42 REMARK 500 ALA D 11 87.82 172.06 REMARK 500 ALA D 13 50.07 -171.21 REMARK 500 ALA D 16 47.37 -158.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO A 500 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 46 NE2 REMARK 620 2 HIS A 50 NE2 101.8 REMARK 620 3 GLU A 126 OE1 78.8 79.2 REMARK 620 4 GLU A 126 OE2 113.3 109.5 53.1 REMARK 620 5 ALA C 14 O 140.2 96.4 139.9 93.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO B 500 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 46 NE2 REMARK 620 2 HIS B 50 NE2 85.7 REMARK 620 3 GLU B 126 OE1 90.5 125.9 REMARK 620 4 GLU B 126 OE2 81.9 74.2 51.9 REMARK 620 5 ALA D 14 O 166.4 90.1 102.3 109.4 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO B 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 506 DBREF 3HDI A 1 413 UNP Q9KA85 Q9KA85_BACHD 1 413 DBREF 3HDI B 1 413 UNP Q9KA85 Q9KA85_BACHD 1 413 DBREF 3HDI C 1 17 PDB 3HDI 3HDI 1 17 DBREF 3HDI D 1 17 PDB 3HDI 3HDI 1 17 SEQADV 3HDI LEU A 414 UNP Q9KA85 EXPRESSION TAG SEQADV 3HDI GLU A 415 UNP Q9KA85 EXPRESSION TAG SEQADV 3HDI HIS A 416 UNP Q9KA85 EXPRESSION TAG SEQADV 3HDI HIS A 417 UNP Q9KA85 EXPRESSION TAG SEQADV 3HDI HIS A 418 UNP Q9KA85 EXPRESSION TAG SEQADV 3HDI HIS A 419 UNP Q9KA85 EXPRESSION TAG SEQADV 3HDI HIS A 420 UNP Q9KA85 EXPRESSION TAG SEQADV 3HDI HIS A 421 UNP Q9KA85 EXPRESSION TAG SEQADV 3HDI LEU B 414 UNP Q9KA85 EXPRESSION TAG SEQADV 3HDI GLU B 415 UNP Q9KA85 EXPRESSION TAG SEQADV 3HDI HIS B 416 UNP Q9KA85 EXPRESSION TAG SEQADV 3HDI HIS B 417 UNP Q9KA85 EXPRESSION TAG SEQADV 3HDI HIS B 418 UNP Q9KA85 EXPRESSION TAG SEQADV 3HDI HIS B 419 UNP Q9KA85 EXPRESSION TAG SEQADV 3HDI HIS B 420 UNP Q9KA85 EXPRESSION TAG SEQADV 3HDI HIS B 421 UNP Q9KA85 EXPRESSION TAG SEQRES 1 A 421 MET ILE ASN THR MET THR LEU ASP ASN GLY VAL ARG ILE SEQRES 2 A 421 ILE THR GLU LYS MET SER THR VAL ARG SER VAL SER ILE SEQRES 3 A 421 GLY ILE TRP VAL GLY THR GLY SER ARG TYR GLU SER ALA SEQRES 4 A 421 GLU GLU ASN GLY ILE SER HIS PHE LEU GLU HIS MET PHE SEQRES 5 A 421 PHE LYS GLY THR ASN THR ARG SER ALA GLN GLU ILE ALA SEQRES 6 A 421 GLU PHE PHE ASP SER ILE GLY GLY GLN VAL ASN ALA PHE SEQRES 7 A 421 THR SER LYS GLU TYR THR CYS TYR TYR ALA LYS VAL LEU SEQRES 8 A 421 ASP ASP HIS ALA GLY GLN ALA ILE ASP THR LEU SER ASP SEQRES 9 A 421 MET PHE PHE HIS SER THR PHE GLN LYS GLU GLU LEU GLU SEQRES 10 A 421 LYS GLU ARG LYS VAL VAL PHE GLU GLU ILE LYS MET VAL SEQRES 11 A 421 ASP ASP THR PRO ASP ASP ILE VAL HIS ASP LEU LEU SER SEQRES 12 A 421 SER ALA THR TYR GLY LYS HIS SER LEU GLY TYR PRO ILE SEQRES 13 A 421 LEU GLY THR VAL GLU THR LEU ASN SER PHE ASN GLU GLY SEQRES 14 A 421 MET LEU ARG HIS TYR MET ASP ARG PHE TYR THR GLY ASP SEQRES 15 A 421 TYR VAL VAL ILE SER VAL ALA GLY ASN VAL HIS ASP GLU SEQRES 16 A 421 LEU ILE ASP LYS ILE LYS GLU THR PHE SER GLN VAL LYS SEQRES 17 A 421 PRO THR THR TYR ASN TYR GLN GLY GLU LYS PRO MET PHE SEQRES 18 A 421 LEU PRO ASN ARG ILE VAL ARG LYS LYS GLU THR GLU GLN SEQRES 19 A 421 ALA HIS LEU CYS LEU GLY TYR PRO GLY LEU PRO ILE GLY SEQRES 20 A 421 ASP LYS ASP VAL TYR ALA LEU VAL LEU LEU ASN ASN VAL SEQRES 21 A 421 LEU GLY GLY SER MET SER SER ARG LEU PHE GLN ASP ILE SEQRES 22 A 421 ARG GLU LYS ARG GLY LEU CYS TYR SER VAL PHE SER TYR SEQRES 23 A 421 HIS SER SER PHE ARG ASP SER GLY MET LEU THR ILE TYR SEQRES 24 A 421 ALA GLY THR GLY HIS ASP GLN LEU ASP ASP LEU VAL TYR SEQRES 25 A 421 SER ILE GLN GLU THR THR SER ALA LEU ALA GLU LYS GLY SEQRES 26 A 421 LEU THR GLU LYS GLU LEU GLU ASN GLY LYS GLU GLN LEU SEQRES 27 A 421 LYS GLY SER LEU MET LEU SER LEU GLU SER THR ASN SER SEQRES 28 A 421 ARG MET SER ARG ASN GLY LYS ASN GLU LEU LEU LEU LYS SEQRES 29 A 421 LYS HIS ARG SER LEU ASP GLU MET ILE GLU GLN ILE ASN SEQRES 30 A 421 ALA VAL GLN LYS GLN ASP VAL SER ARG LEU ALA LYS ILE SEQRES 31 A 421 LEU LEU SER ALA SER PRO SER ILE SER LEU ILE ASN ALA SEQRES 32 A 421 ASN GLY GLU LEU PRO LYS ALA LEU ILE HIS LEU GLU HIS SEQRES 33 A 421 HIS HIS HIS HIS HIS SEQRES 1 B 421 MET ILE ASN THR MET THR LEU ASP ASN GLY VAL ARG ILE SEQRES 2 B 421 ILE THR GLU LYS MET SER THR VAL ARG SER VAL SER ILE SEQRES 3 B 421 GLY ILE TRP VAL GLY THR GLY SER ARG TYR GLU SER ALA SEQRES 4 B 421 GLU GLU ASN GLY ILE SER HIS PHE LEU GLU HIS MET PHE SEQRES 5 B 421 PHE LYS GLY THR ASN THR ARG SER ALA GLN GLU ILE ALA SEQRES 6 B 421 GLU PHE PHE ASP SER ILE GLY GLY GLN VAL ASN ALA PHE SEQRES 7 B 421 THR SER LYS GLU TYR THR CYS TYR TYR ALA LYS VAL LEU SEQRES 8 B 421 ASP ASP HIS ALA GLY GLN ALA ILE ASP THR LEU SER ASP SEQRES 9 B 421 MET PHE PHE HIS SER THR PHE GLN LYS GLU GLU LEU GLU SEQRES 10 B 421 LYS GLU ARG LYS VAL VAL PHE GLU GLU ILE LYS MET VAL SEQRES 11 B 421 ASP ASP THR PRO ASP ASP ILE VAL HIS ASP LEU LEU SER SEQRES 12 B 421 SER ALA THR TYR GLY LYS HIS SER LEU GLY TYR PRO ILE SEQRES 13 B 421 LEU GLY THR VAL GLU THR LEU ASN SER PHE ASN GLU GLY SEQRES 14 B 421 MET LEU ARG HIS TYR MET ASP ARG PHE TYR THR GLY ASP SEQRES 15 B 421 TYR VAL VAL ILE SER VAL ALA GLY ASN VAL HIS ASP GLU SEQRES 16 B 421 LEU ILE ASP LYS ILE LYS GLU THR PHE SER GLN VAL LYS SEQRES 17 B 421 PRO THR THR TYR ASN TYR GLN GLY GLU LYS PRO MET PHE SEQRES 18 B 421 LEU PRO ASN ARG ILE VAL ARG LYS LYS GLU THR GLU GLN SEQRES 19 B 421 ALA HIS LEU CYS LEU GLY TYR PRO GLY LEU PRO ILE GLY SEQRES 20 B 421 ASP LYS ASP VAL TYR ALA LEU VAL LEU LEU ASN ASN VAL SEQRES 21 B 421 LEU GLY GLY SER MET SER SER ARG LEU PHE GLN ASP ILE SEQRES 22 B 421 ARG GLU LYS ARG GLY LEU CYS TYR SER VAL PHE SER TYR SEQRES 23 B 421 HIS SER SER PHE ARG ASP SER GLY MET LEU THR ILE TYR SEQRES 24 B 421 ALA GLY THR GLY HIS ASP GLN LEU ASP ASP LEU VAL TYR SEQRES 25 B 421 SER ILE GLN GLU THR THR SER ALA LEU ALA GLU LYS GLY SEQRES 26 B 421 LEU THR GLU LYS GLU LEU GLU ASN GLY LYS GLU GLN LEU SEQRES 27 B 421 LYS GLY SER LEU MET LEU SER LEU GLU SER THR ASN SER SEQRES 28 B 421 ARG MET SER ARG ASN GLY LYS ASN GLU LEU LEU LEU LYS SEQRES 29 B 421 LYS HIS ARG SER LEU ASP GLU MET ILE GLU GLN ILE ASN SEQRES 30 B 421 ALA VAL GLN LYS GLN ASP VAL SER ARG LEU ALA LYS ILE SEQRES 31 B 421 LEU LEU SER ALA SER PRO SER ILE SER LEU ILE ASN ALA SEQRES 32 B 421 ASN GLY GLU LEU PRO LYS ALA LEU ILE HIS LEU GLU HIS SEQRES 33 B 421 HIS HIS HIS HIS HIS SEQRES 1 C 17 ALA ALA ALA ALA ALA ALA ALA ALA ALA ALA ALA ALA ALA SEQRES 2 C 17 ALA ALA ALA ALA SEQRES 1 D 17 ALA ALA ALA ALA ALA ALA ALA ALA ALA ALA ALA ALA ALA SEQRES 2 D 17 ALA ALA ALA ALA HET CO A 500 1 HET SO4 A 501 5 HET SO4 A 502 5 HET SO4 A 503 5 HET SO4 A 505 5 HET CO B 500 1 HET SO4 B 504 5 HET SO4 B 506 5 HETNAM CO COBALT (II) ION HETNAM SO4 SULFATE ION FORMUL 5 CO 2(CO 2+) FORMUL 6 SO4 6(O4 S 2-) FORMUL 13 HOH *259(H2 O) HELIX 1 1 GLY A 33 GLU A 37 5 5 HELIX 2 2 SER A 38 ASN A 42 5 5 HELIX 3 3 GLY A 43 PHE A 52 1 10 HELIX 4 4 SER A 60 SER A 70 1 11 HELIX 5 5 HIS A 94 HIS A 108 1 15 HELIX 6 6 GLN A 112 ASP A 132 1 21 HELIX 7 7 THR A 133 GLY A 148 1 16 HELIX 8 8 HIS A 150 TYR A 154 5 5 HELIX 9 9 THR A 159 PHE A 166 1 8 HELIX 10 10 ASN A 167 TYR A 179 1 13 HELIX 11 11 HIS A 193 PHE A 204 1 12 HELIX 12 12 ASP A 250 GLY A 262 1 13 HELIX 13 13 SER A 267 ARG A 274 1 8 HELIX 14 14 GLN A 306 GLU A 323 1 18 HELIX 15 15 THR A 327 LEU A 346 1 20 HELIX 16 16 SER A 348 LEU A 363 1 16 HELIX 17 17 SER A 368 VAL A 379 1 12 HELIX 18 18 GLN A 380 LEU A 392 1 13 HELIX 19 19 GLY B 33 GLU B 37 5 5 HELIX 20 20 SER B 38 ASN B 42 5 5 HELIX 21 21 GLY B 43 PHE B 52 1 10 HELIX 22 22 SER B 60 SER B 70 1 11 HELIX 23 23 HIS B 94 HIS B 108 1 15 HELIX 24 24 GLN B 112 ASP B 132 1 21 HELIX 25 25 THR B 133 GLY B 148 1 16 HELIX 26 26 THR B 159 ASN B 164 1 6 HELIX 27 27 ASN B 167 TYR B 179 1 13 HELIX 28 28 HIS B 193 GLU B 202 1 10 HELIX 29 29 ASP B 250 GLY B 262 1 13 HELIX 30 30 SER B 267 ARG B 274 1 8 HELIX 31 31 GLN B 306 GLY B 325 1 20 HELIX 32 32 THR B 327 LEU B 346 1 20 HELIX 33 33 SER B 348 LEU B 363 1 16 HELIX 34 34 SER B 368 VAL B 379 1 12 HELIX 35 35 GLN B 380 LEU B 392 1 13 SHEET 1 A 6 ASN A 3 THR A 6 0 SHEET 2 A 6 ARG A 12 LYS A 17 -1 O ILE A 13 N MET A 5 SHEET 3 A 6 VAL A 184 GLY A 190 1 O ILE A 186 N ARG A 12 SHEET 4 A 6 SER A 23 VAL A 30 -1 N TRP A 29 O VAL A 185 SHEET 5 A 6 THR A 84 LEU A 91 -1 O ALA A 88 N ILE A 26 SHEET 6 A 6 VAL A 75 THR A 79 -1 N PHE A 78 O CYS A 85 SHEET 1 B 5 ARG A 225 LYS A 229 0 SHEET 2 B 5 SER A 397 ASN A 402 1 O ILE A 398 N ILE A 226 SHEET 3 B 5 GLN A 234 PRO A 242 -1 N GLY A 240 O SER A 397 SHEET 4 B 5 GLY A 294 GLY A 303 -1 O THR A 302 N ALA A 235 SHEET 5 B 5 VAL A 283 SER A 289 -1 N TYR A 286 O THR A 297 SHEET 1 C 6 ASN B 3 THR B 6 0 SHEET 2 C 6 ARG B 12 LYS B 17 -1 O ILE B 13 N MET B 5 SHEET 3 C 6 VAL B 184 GLY B 190 1 O VAL B 188 N ILE B 14 SHEET 4 C 6 SER B 23 VAL B 30 -1 N GLY B 27 O SER B 187 SHEET 5 C 6 THR B 84 LEU B 91 -1 O TYR B 86 N ILE B 28 SHEET 6 C 6 VAL B 75 THR B 79 -1 N ASN B 76 O TYR B 87 SHEET 1 D 5 ARG B 225 LYS B 229 0 SHEET 2 D 5 SER B 397 ASN B 402 1 O ILE B 398 N ILE B 226 SHEET 3 D 5 GLN B 234 PRO B 242 -1 N HIS B 236 O ILE B 401 SHEET 4 D 5 GLY B 294 GLY B 303 -1 O THR B 302 N ALA B 235 SHEET 5 D 5 VAL B 283 SER B 289 -1 N SER B 288 O MET B 295 LINK NE2 HIS A 46 CO CO A 500 1555 1555 2.20 LINK NE2 HIS A 50 CO CO A 500 1555 1555 2.27 LINK OE1 GLU A 126 CO CO A 500 1555 1555 2.56 LINK OE2 GLU A 126 CO CO A 500 1555 1555 2.27 LINK CO CO A 500 O ALA C 14 1555 1555 2.43 LINK NE2 HIS B 46 CO CO B 500 1555 1555 2.31 LINK NE2 HIS B 50 CO CO B 500 1555 1555 2.14 LINK OE1 GLU B 126 CO CO B 500 1555 1555 2.20 LINK OE2 GLU B 126 CO CO B 500 1555 1555 2.68 LINK CO CO B 500 O ALA D 14 1555 1555 2.40 SITE 1 AC1 4 HIS A 46 HIS A 50 GLU A 126 ALA C 14 SITE 1 AC2 2 ARG A 177 TYR A 212 SITE 1 AC3 5 MET A 18 SER A 19 THR A 20 ARG A 352 SITE 2 AC3 5 HOH A 429 SITE 1 AC4 3 THR A 327 GLU A 328 LYS A 381 SITE 1 AC5 3 LYS A 17 HIS A 193 ASP A 194 SITE 1 AC6 5 HIS B 46 HIS B 50 GLU B 126 ALA D 13 SITE 2 AC6 5 ALA D 14 SITE 1 AC7 4 LYS B 17 HIS B 193 ARG B 352 HOH B 519 SITE 1 AC8 3 THR B 327 GLU B 328 LYS B 381 CRYST1 91.141 193.981 125.567 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010972 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005155 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007964 0.00000