HEADER LYASE 07-MAY-09 3HE2 TITLE CRYSTAL STRUCTURE OF ENOYL-COA HYDRATASE FROM MYCOBACTERIUM TITLE 2 TUBERCULOSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENOYL-COA HYDRATASE ECHA6; COMPND 3 CHAIN: A, B, C; COMPND 4 EC: 4.2.1.17; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 STRAIN: 1719B; SOURCE 5 GENE: ECHA6, RV0905, MT0928, MTCY31.33; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: AVA0421 KEYWDS MYCOBACTERIUM TUBERCULOSIS, ENOYL-COA HYDRATASE, FATTY ACID KEYWDS 2 METABOLISM, LIPID METABOLISM, LYASE, STRUCTURAL GENOMICS, SEATTLE KEYWDS 3 STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, SSGCID EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 3 06-SEP-23 3HE2 1 REMARK SEQADV REVDAT 2 22-APR-15 3HE2 1 JRNL VERSN REVDAT 1 09-JUN-09 3HE2 0 JRNL AUTH L.BAUGH,I.PHAN,D.W.BEGLEY,M.C.CLIFTON,B.ARMOUR,D.M.DRANOW, JRNL AUTH 2 B.M.TAYLOR,M.M.MURUTHI,J.ABENDROTH,J.W.FAIRMAN,D.FOX, JRNL AUTH 3 S.H.DIETERICH,B.L.STAKER,A.S.GARDBERG,R.CHOI,S.N.HEWITT, JRNL AUTH 4 A.J.NAPULI,J.MYERS,L.K.BARRETT,Y.ZHANG,M.FERRELL,E.MUNDT, JRNL AUTH 5 K.THOMPKINS,N.TRAN,S.LYONS-ABBOTT,A.ABRAMOV,A.SEKAR, JRNL AUTH 6 D.SERBZHINSKIY,D.LORIMER,G.W.BUCHKO,R.STACY,L.J.STEWART, JRNL AUTH 7 T.E.EDWARDS,W.C.VAN VOORHIS,P.J.MYLER JRNL TITL INCREASING THE STRUCTURAL COVERAGE OF TUBERCULOSIS DRUG JRNL TITL 2 TARGETS. JRNL REF TUBERCULOSIS (EDINB) V. 95 142 2015 JRNL REFN ISSN 1472-9792 JRNL PMID 25613812 JRNL DOI 10.1016/J.TUBE.2014.12.003 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0088 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 32695 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1661 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2283 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.83 REMARK 3 BIN R VALUE (WORKING SET) : 0.2180 REMARK 3 BIN FREE R VALUE SET COUNT : 116 REMARK 3 BIN FREE R VALUE : 0.3150 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5307 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 318 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 34.83 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.49000 REMARK 3 B22 (A**2) : -2.56000 REMARK 3 B33 (A**2) : 0.07000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.360 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.241 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.159 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.412 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.909 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5432 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 3606 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7369 ; 1.477 ; 1.961 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8793 ; 0.930 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 713 ; 5.876 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 222 ;37.528 ;23.874 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 855 ;14.031 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 42 ;20.729 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 849 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6141 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1053 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3572 ; 0.727 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1451 ; 0.167 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5631 ; 1.329 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1860 ; 2.262 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1737 ; 3.709 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 275 5 REMARK 3 1 B 1 B 275 5 REMARK 3 1 C 1 C 275 5 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 1398 ; 0.220 ; 0.500 REMARK 3 MEDIUM POSITIONAL 1 B (A): 1398 ; 0.290 ; 0.500 REMARK 3 MEDIUM POSITIONAL 1 C (A): 1398 ; 0.300 ; 0.500 REMARK 3 LOOSE POSITIONAL 1 A (A): 1482 ; 0.550 ; 5.000 REMARK 3 LOOSE POSITIONAL 1 B (A): 1482 ; 0.560 ; 5.000 REMARK 3 LOOSE POSITIONAL 1 C (A): 1482 ; 0.580 ; 5.000 REMARK 3 MEDIUM THERMAL 1 A (A**2): 1398 ; 1.770 ; 2.000 REMARK 3 MEDIUM THERMAL 1 B (A**2): 1398 ; 2.370 ; 2.000 REMARK 3 MEDIUM THERMAL 1 C (A**2): 1398 ; 2.410 ; 2.000 REMARK 3 LOOSE THERMAL 1 A (A**2): 1482 ; 1.940 ;10.000 REMARK 3 LOOSE THERMAL 1 B (A**2): 1482 ; 2.580 ;10.000 REMARK 3 LOOSE THERMAL 1 C (A**2): 1482 ; 2.520 ;10.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3HE2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-MAY-09. REMARK 100 THE DEPOSITION ID IS D_1000053019. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-APR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32742 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 67.140 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 4.850 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : 67.1400 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 18.8600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.36 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.96 REMARK 200 R MERGE FOR SHELL (I) : 0.48700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MR, MR REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2QQ3, MODIFIED WITH CCP4 PROGRAM REMARK 200 CHAINSAW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: HAMPTON INDEX, H11: 30% PEG 2000 MME, REMARK 280 100MM KSCN, MYTUD.01381.A AT 32.5G/ML, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.06000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.13500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.23500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 67.13500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.06000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.23500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9660 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 ALA A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 MET A -12 REMARK 465 GLY A -11 REMARK 465 THR A -10 REMARK 465 LEU A -9 REMARK 465 GLU A -8 REMARK 465 ALA A -7 REMARK 465 GLN A -6 REMARK 465 THR A -5 REMARK 465 GLN A -4 REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 GLY A 40 REMARK 465 ASP A 41 REMARK 465 GLY A 42 REMARK 465 MET B -20 REMARK 465 ALA B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 MET B -12 REMARK 465 GLY B -11 REMARK 465 THR B -10 REMARK 465 LEU B -9 REMARK 465 GLU B -8 REMARK 465 ALA B -7 REMARK 465 GLN B -6 REMARK 465 THR B -5 REMARK 465 GLN B -4 REMARK 465 GLY B -3 REMARK 465 PRO B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 GLY B 40 REMARK 465 ASP B 41 REMARK 465 GLY B 42 REMARK 465 MET C -20 REMARK 465 ALA C -19 REMARK 465 HIS C -18 REMARK 465 HIS C -17 REMARK 465 HIS C -16 REMARK 465 HIS C -15 REMARK 465 HIS C -14 REMARK 465 HIS C -13 REMARK 465 MET C -12 REMARK 465 GLY C -11 REMARK 465 THR C -10 REMARK 465 LEU C -9 REMARK 465 GLU C -8 REMARK 465 ALA C -7 REMARK 465 GLN C -6 REMARK 465 THR C -5 REMARK 465 GLN C -4 REMARK 465 GLY C -3 REMARK 465 PRO C -2 REMARK 465 GLY C -1 REMARK 465 SER C 0 REMARK 465 GLY C 40 REMARK 465 ASP C 41 REMARK 465 GLY C 42 REMARK 465 GLY C 64 REMARK 465 ASP C 65 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 8 CG CD OE1 OE2 REMARK 470 ARG A 20 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 30 CG CD OE1 OE2 REMARK 470 LYS A 38 CG CD CE NZ REMARK 470 PHE A 67 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG A 74 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 232 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 239 CG CD CE NZ REMARK 470 GLU B 8 CG CD OE1 OE2 REMARK 470 GLU B 30 CG CD OE1 OE2 REMARK 470 PHE B 67 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU B 160 CG CD OE1 OE2 REMARK 470 ARG B 232 CG CD NE CZ NH1 NH2 REMARK 470 MET B 233 CG SD CE REMARK 470 LYS B 235 CG CD CE NZ REMARK 470 LYS B 239 CG CD CE NZ REMARK 470 GLU C 8 CG CD OE1 OE2 REMARK 470 LYS C 38 CG CD CE NZ REMARK 470 PHE C 67 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP C 70 CG OD1 OD2 REMARK 470 ARG C 74 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 77 CG CD OE1 OE2 REMARK 470 GLU C 207 CG CD OE1 OE2 REMARK 470 ARG C 232 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 235 CG CD CE NZ REMARK 470 LYS C 239 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 8 -118.94 55.81 REMARK 500 CYS A 57 110.61 -170.81 REMARK 500 PHE A 67 33.48 -97.34 REMARK 500 PRO A 122 30.46 -80.52 REMARK 500 ASP A 201 36.96 -99.07 REMARK 500 ALA A 208 123.14 -34.99 REMARK 500 GLU B 8 -129.50 50.51 REMARK 500 ASN B 22 16.28 58.67 REMARK 500 CYS B 57 108.12 -168.38 REMARK 500 PRO B 122 28.90 -79.84 REMARK 500 GLU C 8 -121.22 69.76 REMARK 500 CYS C 57 116.34 -165.38 REMARK 500 ASP C 61 -87.89 -101.33 REMARK 500 LEU C 62 96.49 59.37 REMARK 500 PRO C 122 25.09 -78.39 REMARK 500 SER C 153 15.31 -140.62 REMARK 500 ASP C 201 36.54 -94.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE B 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE C 300 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MYTUD.01381.A RELATED DB: TARGETDB DBREF 3HE2 A 1 243 UNP P64014 ECHA6_MYCTU 1 243 DBREF 3HE2 B 1 243 UNP P64014 ECHA6_MYCTU 1 243 DBREF 3HE2 C 1 243 UNP P64014 ECHA6_MYCTU 1 243 SEQADV 3HE2 MET A -20 UNP P64014 EXPRESSION TAG SEQADV 3HE2 ALA A -19 UNP P64014 EXPRESSION TAG SEQADV 3HE2 HIS A -18 UNP P64014 EXPRESSION TAG SEQADV 3HE2 HIS A -17 UNP P64014 EXPRESSION TAG SEQADV 3HE2 HIS A -16 UNP P64014 EXPRESSION TAG SEQADV 3HE2 HIS A -15 UNP P64014 EXPRESSION TAG SEQADV 3HE2 HIS A -14 UNP P64014 EXPRESSION TAG SEQADV 3HE2 HIS A -13 UNP P64014 EXPRESSION TAG SEQADV 3HE2 MET A -12 UNP P64014 EXPRESSION TAG SEQADV 3HE2 GLY A -11 UNP P64014 EXPRESSION TAG SEQADV 3HE2 THR A -10 UNP P64014 EXPRESSION TAG SEQADV 3HE2 LEU A -9 UNP P64014 EXPRESSION TAG SEQADV 3HE2 GLU A -8 UNP P64014 EXPRESSION TAG SEQADV 3HE2 ALA A -7 UNP P64014 EXPRESSION TAG SEQADV 3HE2 GLN A -6 UNP P64014 EXPRESSION TAG SEQADV 3HE2 THR A -5 UNP P64014 EXPRESSION TAG SEQADV 3HE2 GLN A -4 UNP P64014 EXPRESSION TAG SEQADV 3HE2 GLY A -3 UNP P64014 EXPRESSION TAG SEQADV 3HE2 PRO A -2 UNP P64014 EXPRESSION TAG SEQADV 3HE2 GLY A -1 UNP P64014 EXPRESSION TAG SEQADV 3HE2 SER A 0 UNP P64014 EXPRESSION TAG SEQADV 3HE2 MET B -20 UNP P64014 EXPRESSION TAG SEQADV 3HE2 ALA B -19 UNP P64014 EXPRESSION TAG SEQADV 3HE2 HIS B -18 UNP P64014 EXPRESSION TAG SEQADV 3HE2 HIS B -17 UNP P64014 EXPRESSION TAG SEQADV 3HE2 HIS B -16 UNP P64014 EXPRESSION TAG SEQADV 3HE2 HIS B -15 UNP P64014 EXPRESSION TAG SEQADV 3HE2 HIS B -14 UNP P64014 EXPRESSION TAG SEQADV 3HE2 HIS B -13 UNP P64014 EXPRESSION TAG SEQADV 3HE2 MET B -12 UNP P64014 EXPRESSION TAG SEQADV 3HE2 GLY B -11 UNP P64014 EXPRESSION TAG SEQADV 3HE2 THR B -10 UNP P64014 EXPRESSION TAG SEQADV 3HE2 LEU B -9 UNP P64014 EXPRESSION TAG SEQADV 3HE2 GLU B -8 UNP P64014 EXPRESSION TAG SEQADV 3HE2 ALA B -7 UNP P64014 EXPRESSION TAG SEQADV 3HE2 GLN B -6 UNP P64014 EXPRESSION TAG SEQADV 3HE2 THR B -5 UNP P64014 EXPRESSION TAG SEQADV 3HE2 GLN B -4 UNP P64014 EXPRESSION TAG SEQADV 3HE2 GLY B -3 UNP P64014 EXPRESSION TAG SEQADV 3HE2 PRO B -2 UNP P64014 EXPRESSION TAG SEQADV 3HE2 GLY B -1 UNP P64014 EXPRESSION TAG SEQADV 3HE2 SER B 0 UNP P64014 EXPRESSION TAG SEQADV 3HE2 MET C -20 UNP P64014 EXPRESSION TAG SEQADV 3HE2 ALA C -19 UNP P64014 EXPRESSION TAG SEQADV 3HE2 HIS C -18 UNP P64014 EXPRESSION TAG SEQADV 3HE2 HIS C -17 UNP P64014 EXPRESSION TAG SEQADV 3HE2 HIS C -16 UNP P64014 EXPRESSION TAG SEQADV 3HE2 HIS C -15 UNP P64014 EXPRESSION TAG SEQADV 3HE2 HIS C -14 UNP P64014 EXPRESSION TAG SEQADV 3HE2 HIS C -13 UNP P64014 EXPRESSION TAG SEQADV 3HE2 MET C -12 UNP P64014 EXPRESSION TAG SEQADV 3HE2 GLY C -11 UNP P64014 EXPRESSION TAG SEQADV 3HE2 THR C -10 UNP P64014 EXPRESSION TAG SEQADV 3HE2 LEU C -9 UNP P64014 EXPRESSION TAG SEQADV 3HE2 GLU C -8 UNP P64014 EXPRESSION TAG SEQADV 3HE2 ALA C -7 UNP P64014 EXPRESSION TAG SEQADV 3HE2 GLN C -6 UNP P64014 EXPRESSION TAG SEQADV 3HE2 THR C -5 UNP P64014 EXPRESSION TAG SEQADV 3HE2 GLN C -4 UNP P64014 EXPRESSION TAG SEQADV 3HE2 GLY C -3 UNP P64014 EXPRESSION TAG SEQADV 3HE2 PRO C -2 UNP P64014 EXPRESSION TAG SEQADV 3HE2 GLY C -1 UNP P64014 EXPRESSION TAG SEQADV 3HE2 SER C 0 UNP P64014 EXPRESSION TAG SEQRES 1 A 264 MET ALA HIS HIS HIS HIS HIS HIS MET GLY THR LEU GLU SEQRES 2 A 264 ALA GLN THR GLN GLY PRO GLY SER MET ILE GLY ILE THR SEQRES 3 A 264 GLN ALA GLU ALA VAL LEU THR ILE GLU LEU GLN ARG PRO SEQRES 4 A 264 GLU ARG ARG ASN ALA LEU ASN SER GLN LEU VAL GLU GLU SEQRES 5 A 264 LEU THR GLN ALA ILE ARG LYS ALA GLY ASP GLY SER ALA SEQRES 6 A 264 ARG ALA ILE VAL LEU THR GLY GLN GLY THR ALA PHE CYS SEQRES 7 A 264 ALA GLY ALA ASP LEU SER GLY ASP ALA PHE ALA ALA ASP SEQRES 8 A 264 TYR PRO ASP ARG LEU ILE GLU LEU HIS LYS ALA MET ASP SEQRES 9 A 264 ALA SER PRO MET PRO VAL VAL GLY ALA ILE ASN GLY PRO SEQRES 10 A 264 ALA ILE GLY ALA GLY LEU GLN LEU ALA MET GLN CYS ASP SEQRES 11 A 264 LEU ARG VAL VAL ALA PRO ASP ALA PHE PHE GLN PHE PRO SEQRES 12 A 264 THR SER LYS TYR GLY LEU ALA LEU ASP ASN TRP SER ILE SEQRES 13 A 264 ARG ARG LEU SER SER LEU VAL GLY HIS GLY ARG ALA ARG SEQRES 14 A 264 ALA MET LEU LEU SER ALA GLU LYS LEU THR ALA GLU ILE SEQRES 15 A 264 ALA LEU HIS THR GLY MET ALA ASN ARG ILE GLY THR LEU SEQRES 16 A 264 ALA ASP ALA GLN ALA TRP ALA ALA GLU ILE ALA ARG LEU SEQRES 17 A 264 ALA PRO LEU ALA ILE GLN HIS ALA LYS ARG VAL LEU ASN SEQRES 18 A 264 ASP ASP GLY ALA ILE GLU GLU ALA TRP PRO ALA HIS LYS SEQRES 19 A 264 GLU LEU PHE ASP LYS ALA TRP GLY SER GLN ASP VAL ILE SEQRES 20 A 264 GLU ALA GLN VAL ALA ARG MET GLU LYS ARG PRO PRO LYS SEQRES 21 A 264 PHE GLN GLY ALA SEQRES 1 B 264 MET ALA HIS HIS HIS HIS HIS HIS MET GLY THR LEU GLU SEQRES 2 B 264 ALA GLN THR GLN GLY PRO GLY SER MET ILE GLY ILE THR SEQRES 3 B 264 GLN ALA GLU ALA VAL LEU THR ILE GLU LEU GLN ARG PRO SEQRES 4 B 264 GLU ARG ARG ASN ALA LEU ASN SER GLN LEU VAL GLU GLU SEQRES 5 B 264 LEU THR GLN ALA ILE ARG LYS ALA GLY ASP GLY SER ALA SEQRES 6 B 264 ARG ALA ILE VAL LEU THR GLY GLN GLY THR ALA PHE CYS SEQRES 7 B 264 ALA GLY ALA ASP LEU SER GLY ASP ALA PHE ALA ALA ASP SEQRES 8 B 264 TYR PRO ASP ARG LEU ILE GLU LEU HIS LYS ALA MET ASP SEQRES 9 B 264 ALA SER PRO MET PRO VAL VAL GLY ALA ILE ASN GLY PRO SEQRES 10 B 264 ALA ILE GLY ALA GLY LEU GLN LEU ALA MET GLN CYS ASP SEQRES 11 B 264 LEU ARG VAL VAL ALA PRO ASP ALA PHE PHE GLN PHE PRO SEQRES 12 B 264 THR SER LYS TYR GLY LEU ALA LEU ASP ASN TRP SER ILE SEQRES 13 B 264 ARG ARG LEU SER SER LEU VAL GLY HIS GLY ARG ALA ARG SEQRES 14 B 264 ALA MET LEU LEU SER ALA GLU LYS LEU THR ALA GLU ILE SEQRES 15 B 264 ALA LEU HIS THR GLY MET ALA ASN ARG ILE GLY THR LEU SEQRES 16 B 264 ALA ASP ALA GLN ALA TRP ALA ALA GLU ILE ALA ARG LEU SEQRES 17 B 264 ALA PRO LEU ALA ILE GLN HIS ALA LYS ARG VAL LEU ASN SEQRES 18 B 264 ASP ASP GLY ALA ILE GLU GLU ALA TRP PRO ALA HIS LYS SEQRES 19 B 264 GLU LEU PHE ASP LYS ALA TRP GLY SER GLN ASP VAL ILE SEQRES 20 B 264 GLU ALA GLN VAL ALA ARG MET GLU LYS ARG PRO PRO LYS SEQRES 21 B 264 PHE GLN GLY ALA SEQRES 1 C 264 MET ALA HIS HIS HIS HIS HIS HIS MET GLY THR LEU GLU SEQRES 2 C 264 ALA GLN THR GLN GLY PRO GLY SER MET ILE GLY ILE THR SEQRES 3 C 264 GLN ALA GLU ALA VAL LEU THR ILE GLU LEU GLN ARG PRO SEQRES 4 C 264 GLU ARG ARG ASN ALA LEU ASN SER GLN LEU VAL GLU GLU SEQRES 5 C 264 LEU THR GLN ALA ILE ARG LYS ALA GLY ASP GLY SER ALA SEQRES 6 C 264 ARG ALA ILE VAL LEU THR GLY GLN GLY THR ALA PHE CYS SEQRES 7 C 264 ALA GLY ALA ASP LEU SER GLY ASP ALA PHE ALA ALA ASP SEQRES 8 C 264 TYR PRO ASP ARG LEU ILE GLU LEU HIS LYS ALA MET ASP SEQRES 9 C 264 ALA SER PRO MET PRO VAL VAL GLY ALA ILE ASN GLY PRO SEQRES 10 C 264 ALA ILE GLY ALA GLY LEU GLN LEU ALA MET GLN CYS ASP SEQRES 11 C 264 LEU ARG VAL VAL ALA PRO ASP ALA PHE PHE GLN PHE PRO SEQRES 12 C 264 THR SER LYS TYR GLY LEU ALA LEU ASP ASN TRP SER ILE SEQRES 13 C 264 ARG ARG LEU SER SER LEU VAL GLY HIS GLY ARG ALA ARG SEQRES 14 C 264 ALA MET LEU LEU SER ALA GLU LYS LEU THR ALA GLU ILE SEQRES 15 C 264 ALA LEU HIS THR GLY MET ALA ASN ARG ILE GLY THR LEU SEQRES 16 C 264 ALA ASP ALA GLN ALA TRP ALA ALA GLU ILE ALA ARG LEU SEQRES 17 C 264 ALA PRO LEU ALA ILE GLN HIS ALA LYS ARG VAL LEU ASN SEQRES 18 C 264 ASP ASP GLY ALA ILE GLU GLU ALA TRP PRO ALA HIS LYS SEQRES 19 C 264 GLU LEU PHE ASP LYS ALA TRP GLY SER GLN ASP VAL ILE SEQRES 20 C 264 GLU ALA GLN VAL ALA ARG MET GLU LYS ARG PRO PRO LYS SEQRES 21 C 264 PHE GLN GLY ALA HET PGE A 300 10 HET PGE B 300 10 HET PGE C 300 10 HETNAM PGE TRIETHYLENE GLYCOL FORMUL 4 PGE 3(C6 H14 O4) FORMUL 7 HOH *318(H2 O) HELIX 1 1 ARG A 17 ARG A 21 5 5 HELIX 2 2 ASN A 25 LYS A 38 1 14 HELIX 3 3 PHE A 67 ALA A 69 5 3 HELIX 4 4 ASP A 70 SER A 85 1 16 HELIX 5 5 GLY A 99 CYS A 108 1 10 HELIX 6 6 PRO A 122 GLY A 127 1 6 HELIX 7 7 ASP A 131 GLY A 143 1 13 HELIX 8 8 GLY A 143 ALA A 154 1 12 HELIX 9 9 ALA A 159 GLY A 166 1 8 HELIX 10 10 THR A 173 ARG A 186 1 14 HELIX 11 11 ALA A 188 ASP A 201 1 14 HELIX 12 12 TRP A 209 GLY A 221 1 13 HELIX 13 13 SER A 222 GLU A 234 1 13 HELIX 14 14 ARG B 17 ARG B 21 5 5 HELIX 15 15 ASN B 25 ALA B 39 1 15 HELIX 16 16 PHE B 67 ALA B 69 5 3 HELIX 17 17 ASP B 70 SER B 85 1 16 HELIX 18 18 GLY B 99 CYS B 108 1 10 HELIX 19 19 PRO B 122 GLY B 127 1 6 HELIX 20 20 ASP B 131 GLY B 143 1 13 HELIX 21 21 GLY B 143 ALA B 154 1 12 HELIX 22 22 ALA B 159 GLY B 166 1 8 HELIX 23 23 THR B 173 ARG B 186 1 14 HELIX 24 24 ALA B 188 ASP B 201 1 14 HELIX 25 25 TRP B 209 GLY B 221 1 13 HELIX 26 26 SER B 222 GLU B 234 1 13 HELIX 27 27 ARG C 17 ARG C 21 5 5 HELIX 28 28 ASN C 25 LYS C 38 1 14 HELIX 29 29 PHE C 67 ALA C 69 5 3 HELIX 30 30 ASP C 70 SER C 85 1 16 HELIX 31 31 GLY C 99 CYS C 108 1 10 HELIX 32 32 PRO C 122 GLY C 127 1 6 HELIX 33 33 ASP C 131 GLY C 143 1 13 HELIX 34 34 GLY C 143 ALA C 154 1 12 HELIX 35 35 ALA C 159 GLY C 166 1 8 HELIX 36 36 THR C 173 ALA C 185 1 13 HELIX 37 37 ALA C 188 ASP C 201 1 14 HELIX 38 38 TRP C 209 GLY C 221 1 13 HELIX 39 39 SER C 222 LYS C 235 1 14 SHEET 1 A 6 ILE A 2 ALA A 7 0 SHEET 2 A 6 VAL A 10 LEU A 15 -1 O THR A 12 N THR A 5 SHEET 3 A 6 ALA A 46 GLY A 51 1 O VAL A 48 N ILE A 13 SHEET 4 A 6 VAL A 89 ILE A 93 1 O ALA A 92 N LEU A 49 SHEET 5 A 6 LEU A 110 VAL A 113 1 O VAL A 112 N GLY A 91 SHEET 6 A 6 ARG A 170 ILE A 171 1 O ARG A 170 N VAL A 113 SHEET 1 B 3 ALA A 97 ILE A 98 0 SHEET 2 B 3 PHE A 118 GLN A 120 1 O PHE A 118 N ALA A 97 SHEET 3 B 3 LEU A 157 THR A 158 -1 O LEU A 157 N PHE A 119 SHEET 1 C 6 ILE B 2 ALA B 7 0 SHEET 2 C 6 VAL B 10 LEU B 15 -1 O GLU B 14 N GLY B 3 SHEET 3 C 6 ALA B 46 GLY B 51 1 O VAL B 48 N ILE B 13 SHEET 4 C 6 VAL B 89 ILE B 93 1 O VAL B 90 N ILE B 47 SHEET 5 C 6 LEU B 110 VAL B 113 1 O LEU B 110 N GLY B 91 SHEET 6 C 6 ARG B 170 ILE B 171 1 O ARG B 170 N VAL B 113 SHEET 1 D 3 ALA B 97 ILE B 98 0 SHEET 2 D 3 PHE B 118 GLN B 120 1 O PHE B 118 N ALA B 97 SHEET 3 D 3 LEU B 157 THR B 158 -1 O LEU B 157 N PHE B 119 SHEET 1 E 6 ILE C 2 ALA C 7 0 SHEET 2 E 6 VAL C 10 LEU C 15 -1 O GLU C 14 N GLY C 3 SHEET 3 E 6 ALA C 46 GLY C 51 1 O VAL C 48 N ILE C 13 SHEET 4 E 6 VAL C 89 ILE C 93 1 O VAL C 90 N ILE C 47 SHEET 5 E 6 LEU C 110 VAL C 113 1 O LEU C 110 N GLY C 91 SHEET 6 E 6 ARG C 170 ILE C 171 1 O ARG C 170 N VAL C 113 SHEET 1 F 3 ALA C 97 ILE C 98 0 SHEET 2 F 3 PHE C 118 GLN C 120 1 O PHE C 118 N ALA C 97 SHEET 3 F 3 LEU C 157 THR C 158 -1 O LEU C 157 N PHE C 119 CISPEP 1 LYS A 38 ALA A 39 0 8.76 SITE 1 AC1 3 GLN A 103 GLN A 107 HOH A 311 SITE 1 AC2 5 ILE B 76 HIS B 79 GLN B 103 GLN B 107 SITE 2 AC2 5 ASP B 131 SITE 1 AC3 2 GLN C 103 GLN C 107 CRYST1 70.120 76.470 134.270 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014261 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013077 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007448 0.00000