data_3HFO # _entry.id 3HFO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3HFO pdb_00003hfo 10.2210/pdb3hfo/pdb RCSB RCSB053075 ? ? WWPDB D_1000053075 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1HK9 Homologue unspecified PDB 1U1T Homologue unspecified PDB 1KQ1 Homologue unspecified PDB 2QTX Homologue unspecified PDB 1U1S Homologue unspecified PDB 1KQ2 'Homologue, with RNA bound' unspecified PDB 3HFN . unspecified # _pdbx_database_status.entry_id 3HFO _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-05-12 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Boggild, A.' 1 'Overgaard, M.' 2 'Valentin-Hansen, P.' 3 'Brodersen, D.E.' 4 # _citation.id primary _citation.title 'Cyanobacteria contain a structural homologue of the Hfq protein with altered RNA-binding properties.' _citation.journal_abbrev 'Febs J.' _citation.journal_volume 276 _citation.page_first 3904 _citation.page_last 3915 _citation.year 2009 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 1742-464X _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19777643 _citation.pdbx_database_id_DOI 10.1111/j.1742-4658.2009.07104.x # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Boggild, A.' 1 ? primary 'Overgaard, M.' 2 ? primary 'Valentin-Hansen, P.' 3 ? primary 'Brodersen, D.E.' 4 ? # _cell.length_a 81.470 _cell.length_b 86.160 _cell.length_c 103.180 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3HFO _cell.pdbx_unique_axis ? _cell.Z_PDB 48 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'F 2 2 2' _symmetry.entry_id 3HFO _symmetry.Int_Tables_number 22 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ssr3341 protein' 7839.961 3 ? ? ? ? 2 water nat water 18.015 272 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code MSRFDSGLPSVRQVQLLIKDQTPVEIKLLTGDSLFGTIRWQDTDGLGLVDDSERSTIVRLAAIAYITPRR _entity_poly.pdbx_seq_one_letter_code_can MSRFDSGLPSVRQVQLLIKDQTPVEIKLLTGDSLFGTIRWQDTDGLGLVDDSERSTIVRLAAIAYITPRR _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 ARG n 1 4 PHE n 1 5 ASP n 1 6 SER n 1 7 GLY n 1 8 LEU n 1 9 PRO n 1 10 SER n 1 11 VAL n 1 12 ARG n 1 13 GLN n 1 14 VAL n 1 15 GLN n 1 16 LEU n 1 17 LEU n 1 18 ILE n 1 19 LYS n 1 20 ASP n 1 21 GLN n 1 22 THR n 1 23 PRO n 1 24 VAL n 1 25 GLU n 1 26 ILE n 1 27 LYS n 1 28 LEU n 1 29 LEU n 1 30 THR n 1 31 GLY n 1 32 ASP n 1 33 SER n 1 34 LEU n 1 35 PHE n 1 36 GLY n 1 37 THR n 1 38 ILE n 1 39 ARG n 1 40 TRP n 1 41 GLN n 1 42 ASP n 1 43 THR n 1 44 ASP n 1 45 GLY n 1 46 LEU n 1 47 GLY n 1 48 LEU n 1 49 VAL n 1 50 ASP n 1 51 ASP n 1 52 SER n 1 53 GLU n 1 54 ARG n 1 55 SER n 1 56 THR n 1 57 ILE n 1 58 VAL n 1 59 ARG n 1 60 LEU n 1 61 ALA n 1 62 ALA n 1 63 ILE n 1 64 ALA n 1 65 TYR n 1 66 ILE n 1 67 THR n 1 68 PRO n 1 69 ARG n 1 70 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ssr3341 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain PCC6803 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details 'codons optimised for E. coli expression' _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Synechocystis sp. PCC 6803' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1148 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ER2566 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pTYP11 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code P74112_SYNY3 _struct_ref.pdbx_db_accession P74112 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code MSRFDSGLPSVRQVQLLIKDQTPVEIKLLTGDSLFGTIRWQDTDGLGLVDDSERSTIVRLAAIAYITPRR _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3HFO A 1 ? 70 ? P74112 1 ? 70 ? 1 70 2 1 3HFO B 1 ? 70 ? P74112 1 ? 70 ? 1 70 3 1 3HFO C 1 ? 70 ? P74112 1 ? 70 ? 1 70 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3HFO _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 1.92 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 36.09 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.temp 292 _exptl_crystal_grow.pdbx_details '60% Tacsimate, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 292K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2008-06-19 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Double crystal monochromator, Si(111)' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'MAX II BEAMLINE I911-3' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9000 _diffrn_source.pdbx_synchrotron_site 'MAX II' _diffrn_source.pdbx_synchrotron_beamline I911-3 # _reflns.entry_id 3HFO _reflns.d_resolution_high 1.210 _reflns.number_obs 52709 _reflns.pdbx_Rmerge_I_obs 0.048 _reflns.percent_possible_obs 96.500 _reflns.B_iso_Wilson_estimate 16.864 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 26.2 _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 24.23 _reflns.pdbx_redundancy 4.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.21 1.25 11448 ? 3180 0.902 1.4 ? ? ? ? ? 79.20 1 1 1.25 1.28 16912 ? 3756 0.801 1.9 ? ? ? ? ? 96.50 2 1 1.28 1.32 18324 ? 3711 0.664 2.5 ? ? ? ? ? 97.20 3 1 1.32 1.36 17555 ? 3558 0.581 2.8 ? ? ? ? ? 97.40 4 1 1.36 1.40 17421 ? 3516 0.435 3.6 ? ? ? ? ? 97.80 5 1 1.40 1.45 16745 ? 3380 0.344 4.7 ? ? ? ? ? 97.80 6 1 1.45 1.51 16350 ? 3298 0.249 6.4 ? ? ? ? ? 98.30 7 1 1.51 1.57 15711 ? 3175 0.197 7.9 ? ? ? ? ? 98.30 8 1 1.57 1.64 15132 ? 3042 0.153 10.1 ? ? ? ? ? 98.50 9 1 1.64 1.72 14405 ? 2907 0.112 13.3 ? ? ? ? ? 98.70 10 1 1.72 1.81 13893 ? 2793 0.079 18.3 ? ? ? ? ? 98.80 11 1 1.81 1.92 13171 ? 2650 0.053 26.5 ? ? ? ? ? 99.00 12 1 1.92 2.05 12350 ? 2501 0.040 34.3 ? ? ? ? ? 99.40 13 1 2.05 2.22 11436 ? 2308 0.030 45.1 ? ? ? ? ? 98.90 14 1 2.22 2.43 10516 ? 2128 0.026 51.7 ? ? ? ? ? 98.70 15 1 2.43 2.72 9649 ? 1960 0.025 54.4 ? ? ? ? ? 98.70 16 1 2.72 3.14 8368 ? 1694 0.020 65.7 ? ? ? ? ? 97.80 17 1 3.14 3.84 7109 ? 1437 0.016 77.7 ? ? ? ? ? 97.20 18 1 3.84 5.43 5477 ? 1125 0.014 81.6 ? ? ? ? ? 95.90 19 1 5.43 ? 2733 ? 590 0.015 77.2 ? ? ? ? ? 87.50 20 1 # _refine.entry_id 3HFO _refine.ls_d_res_high 1.300 _refine.ls_d_res_low 26.199 _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.080 _refine.ls_number_reflns_obs 43747 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details ? _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.154 _refine.ls_R_factor_R_work 0.152 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.200 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 3.780 _refine.ls_number_reflns_R_free 1652 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 17.734 _refine.solvent_model_param_bsol 56.911 _refine.solvent_model_param_ksol 0.389 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.009 _refine.aniso_B[2][2] 1.237 _refine.aniso_B[3][3] -1.229 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] -0.000 _refine.aniso_B[2][3] -0.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.040 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.110 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.900 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB entry 1HK9' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.891 _refine.B_iso_max 64.74 _refine.B_iso_min 5.63 _refine.occupancy_max 1.00 _refine.occupancy_min 0.16 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1531 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 272 _refine_hist.number_atoms_total 1803 _refine_hist.d_res_high 1.300 _refine_hist.d_res_low 26.199 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 1667 0.017 ? ? 'X-RAY DIFFRACTION' ? f_angle_d 2294 1.798 ? ? 'X-RAY DIFFRACTION' ? f_chiral_restr 284 0.113 ? ? 'X-RAY DIFFRACTION' ? f_plane_restr 297 0.008 ? ? 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 663 15.115 ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 1.300 1.338 12 97.000 3480 . 0.189 0.253 . 129 . 3609 . . 'X-RAY DIFFRACTION' 1.338 1.381 12 98.000 3441 . 0.171 0.235 . 132 . 3573 . . 'X-RAY DIFFRACTION' 1.381 1.431 12 98.000 3461 . 0.159 0.229 . 151 . 3612 . . 'X-RAY DIFFRACTION' 1.431 1.488 12 98.000 3491 . 0.142 0.225 . 131 . 3622 . . 'X-RAY DIFFRACTION' 1.488 1.556 12 98.000 3473 . 0.132 0.223 . 137 . 3610 . . 'X-RAY DIFFRACTION' 1.556 1.638 12 99.000 3508 . 0.122 0.191 . 146 . 3654 . . 'X-RAY DIFFRACTION' 1.638 1.740 12 99.000 3498 . 0.119 0.169 . 137 . 3635 . . 'X-RAY DIFFRACTION' 1.740 1.875 12 99.000 3547 . 0.115 0.179 . 138 . 3685 . . 'X-RAY DIFFRACTION' 1.875 2.063 12 99.000 3518 . 0.126 0.181 . 143 . 3661 . . 'X-RAY DIFFRACTION' 2.063 2.362 12 99.000 3570 . 0.127 0.155 . 133 . 3703 . . 'X-RAY DIFFRACTION' 2.362 2.975 12 99.000 3563 . 0.154 0.205 . 137 . 3700 . . 'X-RAY DIFFRACTION' 2.975 26.204 12 95.000 3545 . 0.171 0.200 . 138 . 3683 . . 'X-RAY DIFFRACTION' # _struct.entry_id 3HFO _struct.title 'Crystal Structure of an Hfq protein from Synechocystis sp.' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3HFO _struct_keywords.text 'HFQ, SM, RNA-BINDING PROTEIN, SRNA, TRANSLATIONAL REGULATION, RNA BINDING PROTEIN' _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 2 ? F N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 8 ? GLN A 21 ? LEU A 8 GLN A 21 1 ? 14 HELX_P HELX_P2 2 LEU B 8 ? GLN B 21 ? LEU B 8 GLN B 21 1 ? 14 HELX_P HELX_P3 3 LEU C 8 ? ASP C 20 ? LEU C 8 ASP C 20 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 15 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel A 10 11 ? anti-parallel A 11 12 ? anti-parallel A 12 13 ? anti-parallel A 13 14 ? anti-parallel A 14 15 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE B 63 ? PRO B 68 ? ILE B 63 PRO B 68 A 2 VAL B 24 ? LEU B 28 ? VAL B 24 LEU B 28 A 3 SER B 33 ? GLN B 41 ? SER B 33 GLN B 41 A 4 GLY B 45 ? VAL B 49 ? GLY B 45 VAL B 49 A 5 SER B 55 ? ARG B 59 ? SER B 55 ARG B 59 A 6 ILE A 63 ? PRO A 68 ? ILE A 63 PRO A 68 A 7 PRO A 23 ? LEU A 28 ? PRO A 23 LEU A 28 A 8 SER A 33 ? GLN A 41 ? SER A 33 GLN A 41 A 9 GLY A 45 ? VAL A 49 ? GLY A 45 VAL A 49 A 10 SER A 55 ? ARG A 59 ? SER A 55 ARG A 59 A 11 ILE C 63 ? PRO C 68 ? ILE C 63 PRO C 68 A 12 PRO C 23 ? LEU C 28 ? PRO C 23 LEU C 28 A 13 SER C 33 ? GLN C 41 ? SER C 33 GLN C 41 A 14 GLY C 45 ? VAL C 49 ? GLY C 45 VAL C 49 A 15 SER C 55 ? ARG C 59 ? SER C 55 ARG C 59 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O THR B 67 ? O THR B 67 N GLU B 25 ? N GLU B 25 A 2 3 N VAL B 24 ? N VAL B 24 O GLY B 36 ? O GLY B 36 A 3 4 N ARG B 39 ? N ARG B 39 O GLY B 47 ? O GLY B 47 A 4 5 N LEU B 46 ? N LEU B 46 O VAL B 58 ? O VAL B 58 A 5 6 O ILE B 57 ? O ILE B 57 N ILE A 66 ? N ILE A 66 A 6 7 O ALA A 64 ? O ALA A 64 N LYS A 27 ? N LYS A 27 A 7 8 N VAL A 24 ? N VAL A 24 O GLY A 36 ? O GLY A 36 A 8 9 N ARG A 39 ? N ARG A 39 O GLY A 47 ? O GLY A 47 A 9 10 N LEU A 46 ? N LEU A 46 O VAL A 58 ? O VAL A 58 A 10 11 N ILE A 57 ? N ILE A 57 O ILE C 66 ? O ILE C 66 A 11 12 O THR C 67 ? O THR C 67 N GLU C 25 ? N GLU C 25 A 12 13 N VAL C 24 ? N VAL C 24 O GLY C 36 ? O GLY C 36 A 13 14 N ARG C 39 ? N ARG C 39 O GLY C 47 ? O GLY C 47 A 14 15 N LEU C 48 ? N LEU C 48 O THR C 56 ? O THR C 56 # _atom_sites.entry_id 3HFO _atom_sites.fract_transf_matrix[1][1] 0.012274 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011606 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009692 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 SER 2 2 ? ? ? A . n A 1 3 ARG 3 3 ? ? ? A . n A 1 4 PHE 4 4 ? ? ? A . n A 1 5 ASP 5 5 5 ASP ASP A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 SER 10 10 10 SER SER A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 ARG 12 12 12 ARG ARG A . n A 1 13 GLN 13 13 13 GLN GLN A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 GLN 15 15 15 GLN GLN A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 ILE 18 18 18 ILE ILE A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 ASP 20 20 20 ASP ASP A . n A 1 21 GLN 21 21 21 GLN GLN A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 PRO 23 23 23 PRO PRO A . n A 1 24 VAL 24 24 24 VAL VAL A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 ILE 26 26 26 ILE ILE A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 THR 30 30 30 THR THR A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 SER 33 33 33 SER SER A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 PHE 35 35 35 PHE PHE A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 THR 37 37 37 THR THR A . n A 1 38 ILE 38 38 38 ILE ILE A . n A 1 39 ARG 39 39 39 ARG ARG A . n A 1 40 TRP 40 40 40 TRP TRP A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 ASP 42 42 42 ASP ASP A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 ASP 44 44 44 ASP ASP A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 ASP 50 50 50 ASP ASP A . n A 1 51 ASP 51 51 51 ASP ASP A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 GLU 53 53 53 GLU GLU A . n A 1 54 ARG 54 54 54 ARG ARG A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 THR 56 56 56 THR THR A . n A 1 57 ILE 57 57 57 ILE ILE A . n A 1 58 VAL 58 58 58 VAL VAL A . n A 1 59 ARG 59 59 59 ARG ARG A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 ALA 61 61 61 ALA ALA A . n A 1 62 ALA 62 62 62 ALA ALA A . n A 1 63 ILE 63 63 63 ILE ILE A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 TYR 65 65 65 TYR TYR A . n A 1 66 ILE 66 66 66 ILE ILE A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 PRO 68 68 68 PRO PRO A . n A 1 69 ARG 69 69 69 ARG ARG A . n A 1 70 ARG 70 70 ? ? ? A . n B 1 1 MET 1 1 ? ? ? B . n B 1 2 SER 2 2 ? ? ? B . n B 1 3 ARG 3 3 ? ? ? B . n B 1 4 PHE 4 4 ? ? ? B . n B 1 5 ASP 5 5 5 ASP ASP B . n B 1 6 SER 6 6 6 SER SER B . n B 1 7 GLY 7 7 7 GLY GLY B . n B 1 8 LEU 8 8 8 LEU LEU B . n B 1 9 PRO 9 9 9 PRO PRO B . n B 1 10 SER 10 10 10 SER SER B . n B 1 11 VAL 11 11 11 VAL VAL B . n B 1 12 ARG 12 12 12 ARG ARG B . n B 1 13 GLN 13 13 13 GLN GLN B . n B 1 14 VAL 14 14 14 VAL VAL B . n B 1 15 GLN 15 15 15 GLN GLN B . n B 1 16 LEU 16 16 16 LEU LEU B . n B 1 17 LEU 17 17 17 LEU LEU B . n B 1 18 ILE 18 18 18 ILE ILE B . n B 1 19 LYS 19 19 19 LYS LYS B . n B 1 20 ASP 20 20 20 ASP ASP B . n B 1 21 GLN 21 21 21 GLN GLN B . n B 1 22 THR 22 22 22 THR THR B . n B 1 23 PRO 23 23 23 PRO PRO B . n B 1 24 VAL 24 24 24 VAL VAL B . n B 1 25 GLU 25 25 25 GLU GLU B . n B 1 26 ILE 26 26 26 ILE ILE B . n B 1 27 LYS 27 27 27 LYS LYS B . n B 1 28 LEU 28 28 28 LEU LEU B . n B 1 29 LEU 29 29 29 LEU LEU B . n B 1 30 THR 30 30 30 THR THR B . n B 1 31 GLY 31 31 31 GLY GLY B . n B 1 32 ASP 32 32 32 ASP ASP B . n B 1 33 SER 33 33 33 SER SER B . n B 1 34 LEU 34 34 34 LEU LEU B . n B 1 35 PHE 35 35 35 PHE PHE B . n B 1 36 GLY 36 36 36 GLY GLY B . n B 1 37 THR 37 37 37 THR THR B . n B 1 38 ILE 38 38 38 ILE ILE B . n B 1 39 ARG 39 39 39 ARG ARG B . n B 1 40 TRP 40 40 40 TRP TRP B . n B 1 41 GLN 41 41 41 GLN GLN B . n B 1 42 ASP 42 42 42 ASP ASP B . n B 1 43 THR 43 43 43 THR THR B . n B 1 44 ASP 44 44 44 ASP ASP B . n B 1 45 GLY 45 45 45 GLY GLY B . n B 1 46 LEU 46 46 46 LEU LEU B . n B 1 47 GLY 47 47 47 GLY GLY B . n B 1 48 LEU 48 48 48 LEU LEU B . n B 1 49 VAL 49 49 49 VAL VAL B . n B 1 50 ASP 50 50 50 ASP ASP B . n B 1 51 ASP 51 51 51 ASP ASP B . n B 1 52 SER 52 52 52 SER SER B . n B 1 53 GLU 53 53 53 GLU GLU B . n B 1 54 ARG 54 54 54 ARG ARG B . n B 1 55 SER 55 55 55 SER SER B . n B 1 56 THR 56 56 56 THR THR B . n B 1 57 ILE 57 57 57 ILE ILE B . n B 1 58 VAL 58 58 58 VAL VAL B . n B 1 59 ARG 59 59 59 ARG ARG B . n B 1 60 LEU 60 60 60 LEU LEU B . n B 1 61 ALA 61 61 61 ALA ALA B . n B 1 62 ALA 62 62 62 ALA ALA B . n B 1 63 ILE 63 63 63 ILE ILE B . n B 1 64 ALA 64 64 64 ALA ALA B . n B 1 65 TYR 65 65 65 TYR TYR B . n B 1 66 ILE 66 66 66 ILE ILE B . n B 1 67 THR 67 67 67 THR THR B . n B 1 68 PRO 68 68 68 PRO PRO B . n B 1 69 ARG 69 69 69 ARG ARG B . n B 1 70 ARG 70 70 70 ARG ARG B . n C 1 1 MET 1 1 ? ? ? C . n C 1 2 SER 2 2 ? ? ? C . n C 1 3 ARG 3 3 ? ? ? C . n C 1 4 PHE 4 4 ? ? ? C . n C 1 5 ASP 5 5 5 ASP ASP C . n C 1 6 SER 6 6 6 SER SER C . n C 1 7 GLY 7 7 7 GLY GLY C . n C 1 8 LEU 8 8 8 LEU LEU C . n C 1 9 PRO 9 9 9 PRO PRO C . n C 1 10 SER 10 10 10 SER SER C . n C 1 11 VAL 11 11 11 VAL VAL C . n C 1 12 ARG 12 12 12 ARG ARG C . n C 1 13 GLN 13 13 13 GLN GLN C . n C 1 14 VAL 14 14 14 VAL VAL C . n C 1 15 GLN 15 15 15 GLN GLN C . n C 1 16 LEU 16 16 16 LEU LEU C . n C 1 17 LEU 17 17 17 LEU LEU C . n C 1 18 ILE 18 18 18 ILE ILE C . n C 1 19 LYS 19 19 19 LYS LYS C . n C 1 20 ASP 20 20 20 ASP ASP C . n C 1 21 GLN 21 21 21 GLN GLN C . n C 1 22 THR 22 22 22 THR THR C . n C 1 23 PRO 23 23 23 PRO PRO C . n C 1 24 VAL 24 24 24 VAL VAL C . n C 1 25 GLU 25 25 25 GLU GLU C . n C 1 26 ILE 26 26 26 ILE ILE C . n C 1 27 LYS 27 27 27 LYS LYS C . n C 1 28 LEU 28 28 28 LEU LEU C . n C 1 29 LEU 29 29 29 LEU LEU C . n C 1 30 THR 30 30 30 THR THR C . n C 1 31 GLY 31 31 31 GLY GLY C . n C 1 32 ASP 32 32 32 ASP ASP C . n C 1 33 SER 33 33 33 SER SER C . n C 1 34 LEU 34 34 34 LEU LEU C . n C 1 35 PHE 35 35 35 PHE PHE C . n C 1 36 GLY 36 36 36 GLY GLY C . n C 1 37 THR 37 37 37 THR THR C . n C 1 38 ILE 38 38 38 ILE ILE C . n C 1 39 ARG 39 39 39 ARG ARG C . n C 1 40 TRP 40 40 40 TRP TRP C . n C 1 41 GLN 41 41 41 GLN GLN C . n C 1 42 ASP 42 42 42 ASP ASP C . n C 1 43 THR 43 43 43 THR THR C . n C 1 44 ASP 44 44 44 ASP ASP C . n C 1 45 GLY 45 45 45 GLY GLY C . n C 1 46 LEU 46 46 46 LEU LEU C . n C 1 47 GLY 47 47 47 GLY GLY C . n C 1 48 LEU 48 48 48 LEU LEU C . n C 1 49 VAL 49 49 49 VAL VAL C . n C 1 50 ASP 50 50 50 ASP ASP C . n C 1 51 ASP 51 51 51 ASP ASP C . n C 1 52 SER 52 52 52 SER SER C . n C 1 53 GLU 53 53 53 GLU GLU C . n C 1 54 ARG 54 54 54 ARG ARG C . n C 1 55 SER 55 55 55 SER SER C . n C 1 56 THR 56 56 56 THR THR C . n C 1 57 ILE 57 57 57 ILE ILE C . n C 1 58 VAL 58 58 58 VAL VAL C . n C 1 59 ARG 59 59 59 ARG ARG C . n C 1 60 LEU 60 60 60 LEU LEU C . n C 1 61 ALA 61 61 61 ALA ALA C . n C 1 62 ALA 62 62 62 ALA ALA C . n C 1 63 ILE 63 63 63 ILE ILE C . n C 1 64 ALA 64 64 64 ALA ALA C . n C 1 65 TYR 65 65 65 TYR TYR C . n C 1 66 ILE 66 66 66 ILE ILE C . n C 1 67 THR 67 67 67 THR THR C . n C 1 68 PRO 68 68 68 PRO PRO C . n C 1 69 ARG 69 69 69 ARG ARG C . n C 1 70 ARG 70 70 70 ARG ARG C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 HOH 1 71 71 HOH HOH A . D 2 HOH 2 72 72 HOH HOH A . D 2 HOH 3 73 3 HOH HOH A . D 2 HOH 4 74 74 HOH HOH A . D 2 HOH 5 75 5 HOH HOH A . D 2 HOH 6 76 6 HOH HOH A . D 2 HOH 7 77 8 HOH HOH A . D 2 HOH 8 78 9 HOH HOH A . D 2 HOH 9 79 10 HOH HOH A . D 2 HOH 10 80 80 HOH HOH A . D 2 HOH 11 81 11 HOH HOH A . D 2 HOH 12 82 15 HOH HOH A . D 2 HOH 13 83 83 HOH HOH A . D 2 HOH 14 84 84 HOH HOH A . D 2 HOH 15 85 17 HOH HOH A . D 2 HOH 16 86 18 HOH HOH A . D 2 HOH 17 87 87 HOH HOH A . D 2 HOH 18 88 19 HOH HOH A . D 2 HOH 19 89 89 HOH HOH A . D 2 HOH 20 90 90 HOH HOH A . D 2 HOH 21 91 20 HOH HOH A . D 2 HOH 22 92 92 HOH HOH A . D 2 HOH 23 93 21 HOH HOH A . D 2 HOH 24 94 94 HOH HOH A . D 2 HOH 25 95 22 HOH HOH A . D 2 HOH 26 96 23 HOH HOH A . D 2 HOH 27 97 25 HOH HOH A . D 2 HOH 28 98 98 HOH HOH A . D 2 HOH 29 99 26 HOH HOH A . D 2 HOH 30 100 27 HOH HOH A . D 2 HOH 31 101 28 HOH HOH A . D 2 HOH 32 102 102 HOH HOH A . D 2 HOH 33 103 30 HOH HOH A . D 2 HOH 34 104 32 HOH HOH A . D 2 HOH 35 105 35 HOH HOH A . D 2 HOH 36 106 36 HOH HOH A . D 2 HOH 37 107 38 HOH HOH A . D 2 HOH 38 108 45 HOH HOH A . D 2 HOH 39 109 109 HOH HOH A . D 2 HOH 40 110 47 HOH HOH A . D 2 HOH 41 111 57 HOH HOH A . D 2 HOH 42 112 112 HOH HOH A . D 2 HOH 43 113 113 HOH HOH A . D 2 HOH 44 114 114 HOH HOH A . D 2 HOH 45 115 62 HOH HOH A . D 2 HOH 46 116 63 HOH HOH A . D 2 HOH 47 117 69 HOH HOH A . D 2 HOH 48 118 118 HOH HOH A . D 2 HOH 49 119 119 HOH HOH A . D 2 HOH 50 121 121 HOH HOH A . D 2 HOH 51 128 128 HOH HOH A . D 2 HOH 52 130 130 HOH HOH A . D 2 HOH 53 131 131 HOH HOH A . D 2 HOH 54 137 137 HOH HOH A . D 2 HOH 55 138 138 HOH HOH A . D 2 HOH 56 139 139 HOH HOH A . D 2 HOH 57 145 145 HOH HOH A . D 2 HOH 58 148 148 HOH HOH A . D 2 HOH 59 149 149 HOH HOH A . D 2 HOH 60 155 155 HOH HOH A . D 2 HOH 61 157 157 HOH HOH A . D 2 HOH 62 161 161 HOH HOH A . D 2 HOH 63 167 167 HOH HOH A . D 2 HOH 64 169 169 HOH HOH A . D 2 HOH 65 176 176 HOH HOH A . D 2 HOH 66 179 179 HOH HOH A . D 2 HOH 67 180 180 HOH HOH A . D 2 HOH 68 182 182 HOH HOH A . D 2 HOH 69 186 186 HOH HOH A . D 2 HOH 70 187 187 HOH HOH A . D 2 HOH 71 189 189 HOH HOH A . D 2 HOH 72 198 198 HOH HOH A . D 2 HOH 73 199 199 HOH HOH A . D 2 HOH 74 200 200 HOH HOH A . D 2 HOH 75 210 210 HOH HOH A . D 2 HOH 76 211 211 HOH HOH A . D 2 HOH 77 213 213 HOH HOH A . D 2 HOH 78 215 215 HOH HOH A . D 2 HOH 79 220 220 HOH HOH A . D 2 HOH 80 227 227 HOH HOH A . D 2 HOH 81 228 228 HOH HOH A . D 2 HOH 82 229 229 HOH HOH A . D 2 HOH 83 230 230 HOH HOH A . D 2 HOH 84 231 231 HOH HOH A . D 2 HOH 85 232 232 HOH HOH A . D 2 HOH 86 234 234 HOH HOH A . D 2 HOH 87 241 241 HOH HOH A . D 2 HOH 88 244 244 HOH HOH A . D 2 HOH 89 245 245 HOH HOH A . D 2 HOH 90 246 246 HOH HOH A . D 2 HOH 91 250 250 HOH HOH A . D 2 HOH 92 254 254 HOH HOH A . D 2 HOH 93 256 256 HOH HOH A . D 2 HOH 94 260 260 HOH HOH A . D 2 HOH 95 262 262 HOH HOH A . D 2 HOH 96 267 267 HOH HOH A . D 2 HOH 97 268 268 HOH HOH A . D 2 HOH 98 269 269 HOH HOH A . D 2 HOH 99 271 271 HOH HOH A . D 2 HOH 100 273 273 HOH HOH A . E 2 HOH 1 71 1 HOH HOH B . E 2 HOH 2 72 2 HOH HOH B . E 2 HOH 3 73 73 HOH HOH B . E 2 HOH 4 74 16 HOH HOH B . E 2 HOH 5 75 24 HOH HOH B . E 2 HOH 6 76 29 HOH HOH B . E 2 HOH 7 77 77 HOH HOH B . E 2 HOH 8 78 78 HOH HOH B . E 2 HOH 9 79 79 HOH HOH B . E 2 HOH 10 80 31 HOH HOH B . E 2 HOH 11 81 33 HOH HOH B . E 2 HOH 12 82 34 HOH HOH B . E 2 HOH 13 83 39 HOH HOH B . E 2 HOH 14 84 40 HOH HOH B . E 2 HOH 15 85 85 HOH HOH B . E 2 HOH 16 86 41 HOH HOH B . E 2 HOH 17 87 42 HOH HOH B . E 2 HOH 18 88 88 HOH HOH B . E 2 HOH 19 89 44 HOH HOH B . E 2 HOH 20 90 48 HOH HOH B . E 2 HOH 21 91 91 HOH HOH B . E 2 HOH 22 92 49 HOH HOH B . E 2 HOH 23 93 93 HOH HOH B . E 2 HOH 24 94 50 HOH HOH B . E 2 HOH 25 95 51 HOH HOH B . E 2 HOH 26 96 56 HOH HOH B . E 2 HOH 27 97 97 HOH HOH B . E 2 HOH 28 98 58 HOH HOH B . E 2 HOH 29 99 59 HOH HOH B . E 2 HOH 30 100 60 HOH HOH B . E 2 HOH 31 101 61 HOH HOH B . E 2 HOH 32 102 64 HOH HOH B . E 2 HOH 33 103 103 HOH HOH B . E 2 HOH 34 104 66 HOH HOH B . E 2 HOH 35 105 67 HOH HOH B . E 2 HOH 36 106 106 HOH HOH B . E 2 HOH 37 107 68 HOH HOH B . E 2 HOH 38 108 70 HOH HOH B . E 2 HOH 39 116 116 HOH HOH B . E 2 HOH 40 122 122 HOH HOH B . E 2 HOH 41 123 123 HOH HOH B . E 2 HOH 42 124 124 HOH HOH B . E 2 HOH 43 127 127 HOH HOH B . E 2 HOH 44 129 129 HOH HOH B . E 2 HOH 45 132 132 HOH HOH B . E 2 HOH 46 133 133 HOH HOH B . E 2 HOH 47 134 134 HOH HOH B . E 2 HOH 48 136 136 HOH HOH B . E 2 HOH 49 140 140 HOH HOH B . E 2 HOH 50 143 143 HOH HOH B . E 2 HOH 51 144 144 HOH HOH B . E 2 HOH 52 152 152 HOH HOH B . E 2 HOH 53 153 153 HOH HOH B . E 2 HOH 54 154 154 HOH HOH B . E 2 HOH 55 156 156 HOH HOH B . E 2 HOH 56 158 158 HOH HOH B . E 2 HOH 57 159 159 HOH HOH B . E 2 HOH 58 160 160 HOH HOH B . E 2 HOH 59 162 162 HOH HOH B . E 2 HOH 60 163 163 HOH HOH B . E 2 HOH 61 164 164 HOH HOH B . E 2 HOH 62 165 165 HOH HOH B . E 2 HOH 63 171 171 HOH HOH B . E 2 HOH 64 172 172 HOH HOH B . E 2 HOH 65 174 174 HOH HOH B . E 2 HOH 66 178 178 HOH HOH B . E 2 HOH 67 181 181 HOH HOH B . E 2 HOH 68 183 183 HOH HOH B . E 2 HOH 69 184 184 HOH HOH B . E 2 HOH 70 185 185 HOH HOH B . E 2 HOH 71 190 190 HOH HOH B . E 2 HOH 72 191 191 HOH HOH B . E 2 HOH 73 192 192 HOH HOH B . E 2 HOH 74 195 195 HOH HOH B . E 2 HOH 75 196 196 HOH HOH B . E 2 HOH 76 205 205 HOH HOH B . E 2 HOH 77 206 206 HOH HOH B . E 2 HOH 78 208 208 HOH HOH B . E 2 HOH 79 217 217 HOH HOH B . E 2 HOH 80 218 218 HOH HOH B . E 2 HOH 81 219 219 HOH HOH B . E 2 HOH 82 225 225 HOH HOH B . E 2 HOH 83 235 235 HOH HOH B . E 2 HOH 84 237 237 HOH HOH B . E 2 HOH 85 238 238 HOH HOH B . E 2 HOH 86 239 239 HOH HOH B . E 2 HOH 87 240 240 HOH HOH B . E 2 HOH 88 242 242 HOH HOH B . E 2 HOH 89 252 252 HOH HOH B . E 2 HOH 90 257 257 HOH HOH B . E 2 HOH 91 258 258 HOH HOH B . E 2 HOH 92 259 259 HOH HOH B . E 2 HOH 93 263 263 HOH HOH B . E 2 HOH 94 264 264 HOH HOH B . E 2 HOH 95 266 266 HOH HOH B . F 2 HOH 1 71 4 HOH HOH C . F 2 HOH 2 72 7 HOH HOH C . F 2 HOH 3 73 12 HOH HOH C . F 2 HOH 4 74 13 HOH HOH C . F 2 HOH 5 75 75 HOH HOH C . F 2 HOH 6 76 76 HOH HOH C . F 2 HOH 7 77 14 HOH HOH C . F 2 HOH 8 78 37 HOH HOH C . F 2 HOH 9 79 43 HOH HOH C . F 2 HOH 10 80 46 HOH HOH C . F 2 HOH 11 81 81 HOH HOH C . F 2 HOH 12 82 82 HOH HOH C . F 2 HOH 13 83 52 HOH HOH C . F 2 HOH 14 84 53 HOH HOH C . F 2 HOH 15 85 54 HOH HOH C . F 2 HOH 16 86 86 HOH HOH C . F 2 HOH 17 87 55 HOH HOH C . F 2 HOH 18 88 65 HOH HOH C . F 2 HOH 19 95 95 HOH HOH C . F 2 HOH 20 96 96 HOH HOH C . F 2 HOH 21 99 99 HOH HOH C . F 2 HOH 22 100 100 HOH HOH C . F 2 HOH 23 101 101 HOH HOH C . F 2 HOH 24 104 104 HOH HOH C . F 2 HOH 25 105 105 HOH HOH C . F 2 HOH 26 107 107 HOH HOH C . F 2 HOH 27 108 108 HOH HOH C . F 2 HOH 28 110 110 HOH HOH C . F 2 HOH 29 111 111 HOH HOH C . F 2 HOH 30 115 115 HOH HOH C . F 2 HOH 31 117 117 HOH HOH C . F 2 HOH 32 120 120 HOH HOH C . F 2 HOH 33 125 125 HOH HOH C . F 2 HOH 34 126 126 HOH HOH C . F 2 HOH 35 135 135 HOH HOH C . F 2 HOH 36 141 141 HOH HOH C . F 2 HOH 37 142 142 HOH HOH C . F 2 HOH 38 146 146 HOH HOH C . F 2 HOH 39 147 147 HOH HOH C . F 2 HOH 40 150 150 HOH HOH C . F 2 HOH 41 151 151 HOH HOH C . F 2 HOH 42 166 166 HOH HOH C . F 2 HOH 43 168 168 HOH HOH C . F 2 HOH 44 173 173 HOH HOH C . F 2 HOH 45 175 175 HOH HOH C . F 2 HOH 46 177 177 HOH HOH C . F 2 HOH 47 188 188 HOH HOH C . F 2 HOH 48 193 193 HOH HOH C . F 2 HOH 49 194 194 HOH HOH C . F 2 HOH 50 197 197 HOH HOH C . F 2 HOH 51 201 201 HOH HOH C . F 2 HOH 52 202 202 HOH HOH C . F 2 HOH 53 203 203 HOH HOH C . F 2 HOH 54 204 204 HOH HOH C . F 2 HOH 55 207 207 HOH HOH C . F 2 HOH 56 209 209 HOH HOH C . F 2 HOH 57 212 212 HOH HOH C . F 2 HOH 58 214 214 HOH HOH C . F 2 HOH 59 216 216 HOH HOH C . F 2 HOH 60 221 221 HOH HOH C . F 2 HOH 61 222 222 HOH HOH C . F 2 HOH 62 223 223 HOH HOH C . F 2 HOH 63 224 224 HOH HOH C . F 2 HOH 64 226 226 HOH HOH C . F 2 HOH 65 233 233 HOH HOH C . F 2 HOH 66 236 236 HOH HOH C . F 2 HOH 67 243 243 HOH HOH C . F 2 HOH 68 247 247 HOH HOH C . F 2 HOH 69 248 248 HOH HOH C . F 2 HOH 70 249 249 HOH HOH C . F 2 HOH 71 251 251 HOH HOH C . F 2 HOH 72 253 253 HOH HOH C . F 2 HOH 73 255 255 HOH HOH C . F 2 HOH 74 261 261 HOH HOH C . F 2 HOH 75 265 265 HOH HOH C . F 2 HOH 76 270 270 HOH HOH C . F 2 HOH 77 272 272 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 8200 ? 1 MORE -58 ? 1 'SSA (A^2)' 19720 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,-y,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 B HOH 89 ? E HOH . 2 1 B HOH 95 ? E HOH . 3 1 B HOH 252 ? E HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-07-14 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2011-11-16 4 'Structure model' 1 3 2012-03-21 5 'Structure model' 1 4 2018-03-07 6 'Structure model' 1 5 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Data collection' 5 6 'Structure model' 'Data collection' 6 6 'Structure model' 'Database references' 7 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' diffrn_source 2 6 'Structure model' chem_comp_atom 3 6 'Structure model' chem_comp_bond 4 6 'Structure model' database_2 5 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 2 6 'Structure model' '_database_2.pdbx_DOI' 3 6 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_phasing_MR.entry_id 3HFO _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor 51.730 _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.500 _pdbx_phasing_MR.d_res_low_rotation 26.200 _pdbx_phasing_MR.d_res_high_translation 2.500 _pdbx_phasing_MR.d_res_low_translation 26.200 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 2 PHASER 2.1.3 'Mon May 26 11:44:01 2008' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 PHENIX . ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 4 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 XDS . ? ? ? ? 'data scaling' ? ? ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 87 ? ? O B HOH 96 ? ? 2.17 2 1 OG C SER 10 ? B O C HOH 84 ? ? 2.19 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 69 ? ? CZ A ARG 69 ? ? NH1 A ARG 69 ? ? 116.72 120.30 -3.58 0.50 N 2 1 CB B ASP 50 ? A CG B ASP 50 ? A OD1 B ASP 50 ? A 123.82 118.30 5.52 0.90 N # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A SER 2 ? A SER 2 3 1 Y 1 A ARG 3 ? A ARG 3 4 1 Y 1 A PHE 4 ? A PHE 4 5 1 Y 1 A ARG 70 ? A ARG 70 6 1 Y 1 B MET 1 ? B MET 1 7 1 Y 1 B SER 2 ? B SER 2 8 1 Y 1 B ARG 3 ? B ARG 3 9 1 Y 1 B PHE 4 ? B PHE 4 10 1 Y 1 C MET 1 ? C MET 1 11 1 Y 1 C SER 2 ? C SER 2 12 1 Y 1 C ARG 3 ? C ARG 3 13 1 Y 1 C PHE 4 ? C PHE 4 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASP N N N N 41 ASP CA C N S 42 ASP C C N N 43 ASP O O N N 44 ASP CB C N N 45 ASP CG C N N 46 ASP OD1 O N N 47 ASP OD2 O N N 48 ASP OXT O N N 49 ASP H H N N 50 ASP H2 H N N 51 ASP HA H N N 52 ASP HB2 H N N 53 ASP HB3 H N N 54 ASP HD2 H N N 55 ASP HXT H N N 56 GLN N N N N 57 GLN CA C N S 58 GLN C C N N 59 GLN O O N N 60 GLN CB C N N 61 GLN CG C N N 62 GLN CD C N N 63 GLN OE1 O N N 64 GLN NE2 N N N 65 GLN OXT O N N 66 GLN H H N N 67 GLN H2 H N N 68 GLN HA H N N 69 GLN HB2 H N N 70 GLN HB3 H N N 71 GLN HG2 H N N 72 GLN HG3 H N N 73 GLN HE21 H N N 74 GLN HE22 H N N 75 GLN HXT H N N 76 GLU N N N N 77 GLU CA C N S 78 GLU C C N N 79 GLU O O N N 80 GLU CB C N N 81 GLU CG C N N 82 GLU CD C N N 83 GLU OE1 O N N 84 GLU OE2 O N N 85 GLU OXT O N N 86 GLU H H N N 87 GLU H2 H N N 88 GLU HA H N N 89 GLU HB2 H N N 90 GLU HB3 H N N 91 GLU HG2 H N N 92 GLU HG3 H N N 93 GLU HE2 H N N 94 GLU HXT H N N 95 GLY N N N N 96 GLY CA C N N 97 GLY C C N N 98 GLY O O N N 99 GLY OXT O N N 100 GLY H H N N 101 GLY H2 H N N 102 GLY HA2 H N N 103 GLY HA3 H N N 104 GLY HXT H N N 105 HOH O O N N 106 HOH H1 H N N 107 HOH H2 H N N 108 ILE N N N N 109 ILE CA C N S 110 ILE C C N N 111 ILE O O N N 112 ILE CB C N S 113 ILE CG1 C N N 114 ILE CG2 C N N 115 ILE CD1 C N N 116 ILE OXT O N N 117 ILE H H N N 118 ILE H2 H N N 119 ILE HA H N N 120 ILE HB H N N 121 ILE HG12 H N N 122 ILE HG13 H N N 123 ILE HG21 H N N 124 ILE HG22 H N N 125 ILE HG23 H N N 126 ILE HD11 H N N 127 ILE HD12 H N N 128 ILE HD13 H N N 129 ILE HXT H N N 130 LEU N N N N 131 LEU CA C N S 132 LEU C C N N 133 LEU O O N N 134 LEU CB C N N 135 LEU CG C N N 136 LEU CD1 C N N 137 LEU CD2 C N N 138 LEU OXT O N N 139 LEU H H N N 140 LEU H2 H N N 141 LEU HA H N N 142 LEU HB2 H N N 143 LEU HB3 H N N 144 LEU HG H N N 145 LEU HD11 H N N 146 LEU HD12 H N N 147 LEU HD13 H N N 148 LEU HD21 H N N 149 LEU HD22 H N N 150 LEU HD23 H N N 151 LEU HXT H N N 152 LYS N N N N 153 LYS CA C N S 154 LYS C C N N 155 LYS O O N N 156 LYS CB C N N 157 LYS CG C N N 158 LYS CD C N N 159 LYS CE C N N 160 LYS NZ N N N 161 LYS OXT O N N 162 LYS H H N N 163 LYS H2 H N N 164 LYS HA H N N 165 LYS HB2 H N N 166 LYS HB3 H N N 167 LYS HG2 H N N 168 LYS HG3 H N N 169 LYS HD2 H N N 170 LYS HD3 H N N 171 LYS HE2 H N N 172 LYS HE3 H N N 173 LYS HZ1 H N N 174 LYS HZ2 H N N 175 LYS HZ3 H N N 176 LYS HXT H N N 177 MET N N N N 178 MET CA C N S 179 MET C C N N 180 MET O O N N 181 MET CB C N N 182 MET CG C N N 183 MET SD S N N 184 MET CE C N N 185 MET OXT O N N 186 MET H H N N 187 MET H2 H N N 188 MET HA H N N 189 MET HB2 H N N 190 MET HB3 H N N 191 MET HG2 H N N 192 MET HG3 H N N 193 MET HE1 H N N 194 MET HE2 H N N 195 MET HE3 H N N 196 MET HXT H N N 197 PHE N N N N 198 PHE CA C N S 199 PHE C C N N 200 PHE O O N N 201 PHE CB C N N 202 PHE CG C Y N 203 PHE CD1 C Y N 204 PHE CD2 C Y N 205 PHE CE1 C Y N 206 PHE CE2 C Y N 207 PHE CZ C Y N 208 PHE OXT O N N 209 PHE H H N N 210 PHE H2 H N N 211 PHE HA H N N 212 PHE HB2 H N N 213 PHE HB3 H N N 214 PHE HD1 H N N 215 PHE HD2 H N N 216 PHE HE1 H N N 217 PHE HE2 H N N 218 PHE HZ H N N 219 PHE HXT H N N 220 PRO N N N N 221 PRO CA C N S 222 PRO C C N N 223 PRO O O N N 224 PRO CB C N N 225 PRO CG C N N 226 PRO CD C N N 227 PRO OXT O N N 228 PRO H H N N 229 PRO HA H N N 230 PRO HB2 H N N 231 PRO HB3 H N N 232 PRO HG2 H N N 233 PRO HG3 H N N 234 PRO HD2 H N N 235 PRO HD3 H N N 236 PRO HXT H N N 237 SER N N N N 238 SER CA C N S 239 SER C C N N 240 SER O O N N 241 SER CB C N N 242 SER OG O N N 243 SER OXT O N N 244 SER H H N N 245 SER H2 H N N 246 SER HA H N N 247 SER HB2 H N N 248 SER HB3 H N N 249 SER HG H N N 250 SER HXT H N N 251 THR N N N N 252 THR CA C N S 253 THR C C N N 254 THR O O N N 255 THR CB C N R 256 THR OG1 O N N 257 THR CG2 C N N 258 THR OXT O N N 259 THR H H N N 260 THR H2 H N N 261 THR HA H N N 262 THR HB H N N 263 THR HG1 H N N 264 THR HG21 H N N 265 THR HG22 H N N 266 THR HG23 H N N 267 THR HXT H N N 268 TRP N N N N 269 TRP CA C N S 270 TRP C C N N 271 TRP O O N N 272 TRP CB C N N 273 TRP CG C Y N 274 TRP CD1 C Y N 275 TRP CD2 C Y N 276 TRP NE1 N Y N 277 TRP CE2 C Y N 278 TRP CE3 C Y N 279 TRP CZ2 C Y N 280 TRP CZ3 C Y N 281 TRP CH2 C Y N 282 TRP OXT O N N 283 TRP H H N N 284 TRP H2 H N N 285 TRP HA H N N 286 TRP HB2 H N N 287 TRP HB3 H N N 288 TRP HD1 H N N 289 TRP HE1 H N N 290 TRP HE3 H N N 291 TRP HZ2 H N N 292 TRP HZ3 H N N 293 TRP HH2 H N N 294 TRP HXT H N N 295 TYR N N N N 296 TYR CA C N S 297 TYR C C N N 298 TYR O O N N 299 TYR CB C N N 300 TYR CG C Y N 301 TYR CD1 C Y N 302 TYR CD2 C Y N 303 TYR CE1 C Y N 304 TYR CE2 C Y N 305 TYR CZ C Y N 306 TYR OH O N N 307 TYR OXT O N N 308 TYR H H N N 309 TYR H2 H N N 310 TYR HA H N N 311 TYR HB2 H N N 312 TYR HB3 H N N 313 TYR HD1 H N N 314 TYR HD2 H N N 315 TYR HE1 H N N 316 TYR HE2 H N N 317 TYR HH H N N 318 TYR HXT H N N 319 VAL N N N N 320 VAL CA C N S 321 VAL C C N N 322 VAL O O N N 323 VAL CB C N N 324 VAL CG1 C N N 325 VAL CG2 C N N 326 VAL OXT O N N 327 VAL H H N N 328 VAL H2 H N N 329 VAL HA H N N 330 VAL HB H N N 331 VAL HG11 H N N 332 VAL HG12 H N N 333 VAL HG13 H N N 334 VAL HG21 H N N 335 VAL HG22 H N N 336 VAL HG23 H N N 337 VAL HXT H N N 338 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASP N CA sing N N 39 ASP N H sing N N 40 ASP N H2 sing N N 41 ASP CA C sing N N 42 ASP CA CB sing N N 43 ASP CA HA sing N N 44 ASP C O doub N N 45 ASP C OXT sing N N 46 ASP CB CG sing N N 47 ASP CB HB2 sing N N 48 ASP CB HB3 sing N N 49 ASP CG OD1 doub N N 50 ASP CG OD2 sing N N 51 ASP OD2 HD2 sing N N 52 ASP OXT HXT sing N N 53 GLN N CA sing N N 54 GLN N H sing N N 55 GLN N H2 sing N N 56 GLN CA C sing N N 57 GLN CA CB sing N N 58 GLN CA HA sing N N 59 GLN C O doub N N 60 GLN C OXT sing N N 61 GLN CB CG sing N N 62 GLN CB HB2 sing N N 63 GLN CB HB3 sing N N 64 GLN CG CD sing N N 65 GLN CG HG2 sing N N 66 GLN CG HG3 sing N N 67 GLN CD OE1 doub N N 68 GLN CD NE2 sing N N 69 GLN NE2 HE21 sing N N 70 GLN NE2 HE22 sing N N 71 GLN OXT HXT sing N N 72 GLU N CA sing N N 73 GLU N H sing N N 74 GLU N H2 sing N N 75 GLU CA C sing N N 76 GLU CA CB sing N N 77 GLU CA HA sing N N 78 GLU C O doub N N 79 GLU C OXT sing N N 80 GLU CB CG sing N N 81 GLU CB HB2 sing N N 82 GLU CB HB3 sing N N 83 GLU CG CD sing N N 84 GLU CG HG2 sing N N 85 GLU CG HG3 sing N N 86 GLU CD OE1 doub N N 87 GLU CD OE2 sing N N 88 GLU OE2 HE2 sing N N 89 GLU OXT HXT sing N N 90 GLY N CA sing N N 91 GLY N H sing N N 92 GLY N H2 sing N N 93 GLY CA C sing N N 94 GLY CA HA2 sing N N 95 GLY CA HA3 sing N N 96 GLY C O doub N N 97 GLY C OXT sing N N 98 GLY OXT HXT sing N N 99 HOH O H1 sing N N 100 HOH O H2 sing N N 101 ILE N CA sing N N 102 ILE N H sing N N 103 ILE N H2 sing N N 104 ILE CA C sing N N 105 ILE CA CB sing N N 106 ILE CA HA sing N N 107 ILE C O doub N N 108 ILE C OXT sing N N 109 ILE CB CG1 sing N N 110 ILE CB CG2 sing N N 111 ILE CB HB sing N N 112 ILE CG1 CD1 sing N N 113 ILE CG1 HG12 sing N N 114 ILE CG1 HG13 sing N N 115 ILE CG2 HG21 sing N N 116 ILE CG2 HG22 sing N N 117 ILE CG2 HG23 sing N N 118 ILE CD1 HD11 sing N N 119 ILE CD1 HD12 sing N N 120 ILE CD1 HD13 sing N N 121 ILE OXT HXT sing N N 122 LEU N CA sing N N 123 LEU N H sing N N 124 LEU N H2 sing N N 125 LEU CA C sing N N 126 LEU CA CB sing N N 127 LEU CA HA sing N N 128 LEU C O doub N N 129 LEU C OXT sing N N 130 LEU CB CG sing N N 131 LEU CB HB2 sing N N 132 LEU CB HB3 sing N N 133 LEU CG CD1 sing N N 134 LEU CG CD2 sing N N 135 LEU CG HG sing N N 136 LEU CD1 HD11 sing N N 137 LEU CD1 HD12 sing N N 138 LEU CD1 HD13 sing N N 139 LEU CD2 HD21 sing N N 140 LEU CD2 HD22 sing N N 141 LEU CD2 HD23 sing N N 142 LEU OXT HXT sing N N 143 LYS N CA sing N N 144 LYS N H sing N N 145 LYS N H2 sing N N 146 LYS CA C sing N N 147 LYS CA CB sing N N 148 LYS CA HA sing N N 149 LYS C O doub N N 150 LYS C OXT sing N N 151 LYS CB CG sing N N 152 LYS CB HB2 sing N N 153 LYS CB HB3 sing N N 154 LYS CG CD sing N N 155 LYS CG HG2 sing N N 156 LYS CG HG3 sing N N 157 LYS CD CE sing N N 158 LYS CD HD2 sing N N 159 LYS CD HD3 sing N N 160 LYS CE NZ sing N N 161 LYS CE HE2 sing N N 162 LYS CE HE3 sing N N 163 LYS NZ HZ1 sing N N 164 LYS NZ HZ2 sing N N 165 LYS NZ HZ3 sing N N 166 LYS OXT HXT sing N N 167 MET N CA sing N N 168 MET N H sing N N 169 MET N H2 sing N N 170 MET CA C sing N N 171 MET CA CB sing N N 172 MET CA HA sing N N 173 MET C O doub N N 174 MET C OXT sing N N 175 MET CB CG sing N N 176 MET CB HB2 sing N N 177 MET CB HB3 sing N N 178 MET CG SD sing N N 179 MET CG HG2 sing N N 180 MET CG HG3 sing N N 181 MET SD CE sing N N 182 MET CE HE1 sing N N 183 MET CE HE2 sing N N 184 MET CE HE3 sing N N 185 MET OXT HXT sing N N 186 PHE N CA sing N N 187 PHE N H sing N N 188 PHE N H2 sing N N 189 PHE CA C sing N N 190 PHE CA CB sing N N 191 PHE CA HA sing N N 192 PHE C O doub N N 193 PHE C OXT sing N N 194 PHE CB CG sing N N 195 PHE CB HB2 sing N N 196 PHE CB HB3 sing N N 197 PHE CG CD1 doub Y N 198 PHE CG CD2 sing Y N 199 PHE CD1 CE1 sing Y N 200 PHE CD1 HD1 sing N N 201 PHE CD2 CE2 doub Y N 202 PHE CD2 HD2 sing N N 203 PHE CE1 CZ doub Y N 204 PHE CE1 HE1 sing N N 205 PHE CE2 CZ sing Y N 206 PHE CE2 HE2 sing N N 207 PHE CZ HZ sing N N 208 PHE OXT HXT sing N N 209 PRO N CA sing N N 210 PRO N CD sing N N 211 PRO N H sing N N 212 PRO CA C sing N N 213 PRO CA CB sing N N 214 PRO CA HA sing N N 215 PRO C O doub N N 216 PRO C OXT sing N N 217 PRO CB CG sing N N 218 PRO CB HB2 sing N N 219 PRO CB HB3 sing N N 220 PRO CG CD sing N N 221 PRO CG HG2 sing N N 222 PRO CG HG3 sing N N 223 PRO CD HD2 sing N N 224 PRO CD HD3 sing N N 225 PRO OXT HXT sing N N 226 SER N CA sing N N 227 SER N H sing N N 228 SER N H2 sing N N 229 SER CA C sing N N 230 SER CA CB sing N N 231 SER CA HA sing N N 232 SER C O doub N N 233 SER C OXT sing N N 234 SER CB OG sing N N 235 SER CB HB2 sing N N 236 SER CB HB3 sing N N 237 SER OG HG sing N N 238 SER OXT HXT sing N N 239 THR N CA sing N N 240 THR N H sing N N 241 THR N H2 sing N N 242 THR CA C sing N N 243 THR CA CB sing N N 244 THR CA HA sing N N 245 THR C O doub N N 246 THR C OXT sing N N 247 THR CB OG1 sing N N 248 THR CB CG2 sing N N 249 THR CB HB sing N N 250 THR OG1 HG1 sing N N 251 THR CG2 HG21 sing N N 252 THR CG2 HG22 sing N N 253 THR CG2 HG23 sing N N 254 THR OXT HXT sing N N 255 TRP N CA sing N N 256 TRP N H sing N N 257 TRP N H2 sing N N 258 TRP CA C sing N N 259 TRP CA CB sing N N 260 TRP CA HA sing N N 261 TRP C O doub N N 262 TRP C OXT sing N N 263 TRP CB CG sing N N 264 TRP CB HB2 sing N N 265 TRP CB HB3 sing N N 266 TRP CG CD1 doub Y N 267 TRP CG CD2 sing Y N 268 TRP CD1 NE1 sing Y N 269 TRP CD1 HD1 sing N N 270 TRP CD2 CE2 doub Y N 271 TRP CD2 CE3 sing Y N 272 TRP NE1 CE2 sing Y N 273 TRP NE1 HE1 sing N N 274 TRP CE2 CZ2 sing Y N 275 TRP CE3 CZ3 doub Y N 276 TRP CE3 HE3 sing N N 277 TRP CZ2 CH2 doub Y N 278 TRP CZ2 HZ2 sing N N 279 TRP CZ3 CH2 sing Y N 280 TRP CZ3 HZ3 sing N N 281 TRP CH2 HH2 sing N N 282 TRP OXT HXT sing N N 283 TYR N CA sing N N 284 TYR N H sing N N 285 TYR N H2 sing N N 286 TYR CA C sing N N 287 TYR CA CB sing N N 288 TYR CA HA sing N N 289 TYR C O doub N N 290 TYR C OXT sing N N 291 TYR CB CG sing N N 292 TYR CB HB2 sing N N 293 TYR CB HB3 sing N N 294 TYR CG CD1 doub Y N 295 TYR CG CD2 sing Y N 296 TYR CD1 CE1 sing Y N 297 TYR CD1 HD1 sing N N 298 TYR CD2 CE2 doub Y N 299 TYR CD2 HD2 sing N N 300 TYR CE1 CZ doub Y N 301 TYR CE1 HE1 sing N N 302 TYR CE2 CZ sing Y N 303 TYR CE2 HE2 sing N N 304 TYR CZ OH sing N N 305 TYR OH HH sing N N 306 TYR OXT HXT sing N N 307 VAL N CA sing N N 308 VAL N H sing N N 309 VAL N H2 sing N N 310 VAL CA C sing N N 311 VAL CA CB sing N N 312 VAL CA HA sing N N 313 VAL C O doub N N 314 VAL C OXT sing N N 315 VAL CB CG1 sing N N 316 VAL CB CG2 sing N N 317 VAL CB HB sing N N 318 VAL CG1 HG11 sing N N 319 VAL CG1 HG12 sing N N 320 VAL CG1 HG13 sing N N 321 VAL CG2 HG21 sing N N 322 VAL CG2 HG22 sing N N 323 VAL CG2 HG23 sing N N 324 VAL OXT HXT sing N N 325 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1HK9 _pdbx_initial_refinement_model.details 'PDB entry 1HK9' #