HEADER BIOSYNTHETIC PROTEIN 14-MAY-09 3HGV TITLE STRUCTURE OF PHENAZINE ANTIBIOTIC BIOSYNTHESIS PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: EHPF; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PANTOEA AGGLOMERANS; SOURCE 3 ORGANISM_COMMON: ERWINIA HERBICOLA; SOURCE 4 ORGANISM_TAXID: 549; SOURCE 5 GENE: EHPF; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PHENAZINE, ANTIBIOTIC, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.K.BERA,V.ATANASOVA,J.F.PARSONS REVDAT 2 08-AUG-18 3HGV 1 JRNL REVDAT 1 28-APR-10 3HGV 0 JRNL AUTH A.K.BERA,V.ATANASOVA,S.GAMAGE,H.ROBINSON,J.F.PARSONS JRNL TITL STRUCTURE OF THE D-ALANYLGRISEOLUTEIC ACID BIOSYNTHETIC JRNL TITL 2 PROTEIN EHPF, AN ATYPICAL MEMBER OF THE ANL SUPERFAMILY OF JRNL TITL 3 ADENYLATING ENZYMES. JRNL REF ACTA CRYSTALLOGR. D BIOL. V. 66 664 2010 JRNL REF 2 CRYSTALLOGR. JRNL REFN ESSN 1399-0047 JRNL PMID 20516619 JRNL DOI 10.1107/S0907444910008425 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.34 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 36666 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1934 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.35 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2559 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.28 REMARK 3 BIN R VALUE (WORKING SET) : 0.2130 REMARK 3 BIN FREE R VALUE SET COUNT : 132 REMARK 3 BIN FREE R VALUE : 0.3310 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5433 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 355 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.02000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.276 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.232 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.167 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.814 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5576 ; 0.025 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7590 ; 1.994 ; 1.957 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 693 ; 7.947 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 253 ;37.473 ;23.874 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 930 ;17.012 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 40 ;20.837 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 861 ; 0.134 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4238 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2543 ; 0.234 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3804 ; 0.309 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 369 ; 0.185 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 49 ; 0.294 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.248 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3583 ; 1.399 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5624 ; 2.187 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2311 ; 3.445 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1963 ; 5.045 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3HGV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-MAY-09. REMARK 100 THE DEPOSITION ID IS D_1000053118. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JUN-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979199 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38679 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 14.40 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 45.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5% TACSIMATE, 0.1M HEPES, 8-12% PEG REMARK 280 MME 5000, PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.41800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.02200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 55.07150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 56.02200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.41800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 55.07150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MSE A 1 REMARK 465 GLY A 123 REMARK 465 TYR A 124 REMARK 465 GLN A 125 REMARK 465 HIS A 126 REMARK 465 ARG A 127 REMARK 465 PRO A 128 REMARK 465 GLY A 129 REMARK 465 ILE A 355 REMARK 465 SER A 356 REMARK 465 GLU A 357 REMARK 465 GLY A 358 REMARK 465 ARG A 359 REMARK 465 LYS A 360 REMARK 465 VAL A 361 REMARK 465 ILE A 362 REMARK 465 GLU A 363 REMARK 465 GLY A 364 REMARK 465 VAL A 365 REMARK 465 TYR A 366 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MSE B 1 REMARK 465 LYS B 2 REMARK 465 GLY B 123 REMARK 465 TYR B 124 REMARK 465 GLN B 125 REMARK 465 HIS B 126 REMARK 465 ARG B 127 REMARK 465 PRO B 128 REMARK 465 GLY B 129 REMARK 465 ILE B 355 REMARK 465 SER B 356 REMARK 465 GLU B 357 REMARK 465 GLY B 358 REMARK 465 ARG B 359 REMARK 465 LYS B 360 REMARK 465 VAL B 361 REMARK 465 ILE B 362 REMARK 465 GLU B 363 REMARK 465 GLY B 364 REMARK 465 VAL B 365 REMARK 465 TYR B 366 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 VAL A 146 CB VAL A 146 CG1 0.224 REMARK 500 ARG B 156 CG ARG B 156 CD 0.162 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 63 NE - CZ - NH1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ARG A 63 NE - CZ - NH2 ANGL. DEV. = -9.1 DEGREES REMARK 500 ARG A 156 NE - CZ - NH2 ANGL. DEV. = -6.8 DEGREES REMARK 500 ARG A 346 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ARG B 156 NE - CZ - NH1 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG B 204 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 90 62.22 77.99 REMARK 500 THR A 99 85.77 8.67 REMARK 500 THR A 100 81.26 50.49 REMARK 500 THR A 141 -128.80 -110.94 REMARK 500 GLU A 239 50.07 -110.72 REMARK 500 LEU A 253 66.65 -117.52 REMARK 500 THR A 277 -169.51 -126.05 REMARK 500 HIS B 90 67.66 72.51 REMARK 500 THR B 99 -105.76 84.38 REMARK 500 THR B 100 169.58 -43.68 REMARK 500 ALA B 102 -101.32 -148.15 REMARK 500 THR B 141 -126.58 -114.12 REMARK 500 SER B 176 -11.20 -39.46 REMARK 500 GLU B 239 53.80 -111.89 REMARK 500 ARG B 330 31.81 -94.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA A 102 PRO A 103 -65.75 REMARK 500 ALA B 102 PRO B 103 -45.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3HGU RELATED DB: PDB DBREF 3HGV A 1 366 UNP Q8GPH0 Q8GPH0_ENTAG 1 366 DBREF 3HGV B 1 366 UNP Q8GPH0 Q8GPH0_ENTAG 1 366 SEQADV 3HGV GLY A -2 UNP Q8GPH0 EXPRESSION TAG SEQADV 3HGV SER A -1 UNP Q8GPH0 EXPRESSION TAG SEQADV 3HGV HIS A 0 UNP Q8GPH0 EXPRESSION TAG SEQADV 3HGV GLY B -2 UNP Q8GPH0 EXPRESSION TAG SEQADV 3HGV SER B -1 UNP Q8GPH0 EXPRESSION TAG SEQADV 3HGV HIS B 0 UNP Q8GPH0 EXPRESSION TAG SEQRES 1 A 369 GLY SER HIS MSE LYS ASP TYR SER LEU GLU ILE ASP ALA SEQRES 2 A 369 VAL MSE LYS ALA ALA GLN ILE ASN ASP THR ASN ASN PHE SEQRES 3 A 369 VAL GLN ALA LEU MSE ARG TRP HIS PHE SER LYS GLU THR SEQRES 4 A 369 GLY SER PRO PHE TRP LEU GLY MSE ARG GLU GLN LEU ASN SEQRES 5 A 369 PHE ASP PRO ILE LYS ASP VAL LYS THR ILE ASN ASP LEU SEQRES 6 A 369 ARG GLN PHE SER ASP ILE SER HIS CYS LEU ARG GLN GLU SEQRES 7 A 369 PRO VAL ALA ASN LEU VAL PRO GLN GLY LEU PRO ALA ASP SEQRES 8 A 369 SER HIS PRO GLN VAL TYR GLU SER GLY GLY THR THR GLY SEQRES 9 A 369 ALA PRO LYS TYR VAL VAL ALA TYR ASP ALA TRP ILE GLU SEQRES 10 A 369 ALA LEU ILE SER TRP ARG MSE SER GLY TYR GLN HIS ARG SEQRES 11 A 369 PRO GLY ARG PRO SER GLY ASN THR LEU ALA ALA ILE PRO SEQRES 12 A 369 THR GLY PRO HIS ILE VAL GLY ALA ILE ASN LYS GLU ARG SEQRES 13 A 369 ALA LEU ARG LEU GLY GLY MSE PHE PHE SER ILE ASP ILE SEQRES 14 A 369 ASP PRO ARG TRP VAL LYS ARG SER LEU SER GLU GLY ASP SEQRES 15 A 369 THR ALA THR VAL ARG LYS TYR THR HIS HIS LEU VAL ASP SEQRES 16 A 369 GLN VAL GLN ASN THR LEU MSE ASN GLN ASP ILE ARG PHE SEQRES 17 A 369 LEU VAL THR THR PRO PRO VAL LEU ARG GLU LEU LEU LYS SEQRES 18 A 369 ARG PRO GLU VAL VAL LEU GLN MSE LYS GLN SER LEU ALA SEQRES 19 A 369 GLN ILE THR LEU GLY GLY THR GLU LEU ASN LEU ASP GLU SEQRES 20 A 369 ILE LYS PHE ILE ALA SER GLU ILE LEU PRO ASP CYS GLU SEQRES 21 A 369 PHE SER ALA SER TYR GLY SER THR SER ALA LEU GLY VAL SEQRES 22 A 369 SER ARG SER LEU LEU ILE THR SER GLU SER GLN GLN VAL SEQRES 23 A 369 ILE TYR ASP SER PHE SER PRO PHE ILE THR TYR ASP VAL SEQRES 24 A 369 VAL ASP SER ILE THR ALA GLN THR VAL GLU TYR GLY GLU SEQRES 25 A 369 ARG GLY ASN VAL ILE VAL THR HIS LEU SER PRO TRP ALA SEQRES 26 A 369 PHE TYR PRO ARG VAL ALA GLU ARG ASP THR ALA ILE ARG SEQRES 27 A 369 LEU PRO GLY VAL SER GLY PHE ALA GLY ASP ARG LEU ALA SEQRES 28 A 369 ASP ILE GLU PRO LEU LYS ILE SER GLU GLY ARG LYS VAL SEQRES 29 A 369 ILE GLU GLY VAL TYR SEQRES 1 B 369 GLY SER HIS MSE LYS ASP TYR SER LEU GLU ILE ASP ALA SEQRES 2 B 369 VAL MSE LYS ALA ALA GLN ILE ASN ASP THR ASN ASN PHE SEQRES 3 B 369 VAL GLN ALA LEU MSE ARG TRP HIS PHE SER LYS GLU THR SEQRES 4 B 369 GLY SER PRO PHE TRP LEU GLY MSE ARG GLU GLN LEU ASN SEQRES 5 B 369 PHE ASP PRO ILE LYS ASP VAL LYS THR ILE ASN ASP LEU SEQRES 6 B 369 ARG GLN PHE SER ASP ILE SER HIS CYS LEU ARG GLN GLU SEQRES 7 B 369 PRO VAL ALA ASN LEU VAL PRO GLN GLY LEU PRO ALA ASP SEQRES 8 B 369 SER HIS PRO GLN VAL TYR GLU SER GLY GLY THR THR GLY SEQRES 9 B 369 ALA PRO LYS TYR VAL VAL ALA TYR ASP ALA TRP ILE GLU SEQRES 10 B 369 ALA LEU ILE SER TRP ARG MSE SER GLY TYR GLN HIS ARG SEQRES 11 B 369 PRO GLY ARG PRO SER GLY ASN THR LEU ALA ALA ILE PRO SEQRES 12 B 369 THR GLY PRO HIS ILE VAL GLY ALA ILE ASN LYS GLU ARG SEQRES 13 B 369 ALA LEU ARG LEU GLY GLY MSE PHE PHE SER ILE ASP ILE SEQRES 14 B 369 ASP PRO ARG TRP VAL LYS ARG SER LEU SER GLU GLY ASP SEQRES 15 B 369 THR ALA THR VAL ARG LYS TYR THR HIS HIS LEU VAL ASP SEQRES 16 B 369 GLN VAL GLN ASN THR LEU MSE ASN GLN ASP ILE ARG PHE SEQRES 17 B 369 LEU VAL THR THR PRO PRO VAL LEU ARG GLU LEU LEU LYS SEQRES 18 B 369 ARG PRO GLU VAL VAL LEU GLN MSE LYS GLN SER LEU ALA SEQRES 19 B 369 GLN ILE THR LEU GLY GLY THR GLU LEU ASN LEU ASP GLU SEQRES 20 B 369 ILE LYS PHE ILE ALA SER GLU ILE LEU PRO ASP CYS GLU SEQRES 21 B 369 PHE SER ALA SER TYR GLY SER THR SER ALA LEU GLY VAL SEQRES 22 B 369 SER ARG SER LEU LEU ILE THR SER GLU SER GLN GLN VAL SEQRES 23 B 369 ILE TYR ASP SER PHE SER PRO PHE ILE THR TYR ASP VAL SEQRES 24 B 369 VAL ASP SER ILE THR ALA GLN THR VAL GLU TYR GLY GLU SEQRES 25 B 369 ARG GLY ASN VAL ILE VAL THR HIS LEU SER PRO TRP ALA SEQRES 26 B 369 PHE TYR PRO ARG VAL ALA GLU ARG ASP THR ALA ILE ARG SEQRES 27 B 369 LEU PRO GLY VAL SER GLY PHE ALA GLY ASP ARG LEU ALA SEQRES 28 B 369 ASP ILE GLU PRO LEU LYS ILE SER GLU GLY ARG LYS VAL SEQRES 29 B 369 ILE GLU GLY VAL TYR MODRES 3HGV MSE A 12 MET SELENOMETHIONINE MODRES 3HGV MSE A 28 MET SELENOMETHIONINE MODRES 3HGV MSE A 44 MET SELENOMETHIONINE MODRES 3HGV MSE A 121 MET SELENOMETHIONINE MODRES 3HGV MSE A 160 MET SELENOMETHIONINE MODRES 3HGV MSE A 199 MET SELENOMETHIONINE MODRES 3HGV MSE A 226 MET SELENOMETHIONINE MODRES 3HGV MSE B 12 MET SELENOMETHIONINE MODRES 3HGV MSE B 28 MET SELENOMETHIONINE MODRES 3HGV MSE B 44 MET SELENOMETHIONINE MODRES 3HGV MSE B 121 MET SELENOMETHIONINE MODRES 3HGV MSE B 160 MET SELENOMETHIONINE MODRES 3HGV MSE B 199 MET SELENOMETHIONINE MODRES 3HGV MSE B 226 MET SELENOMETHIONINE HET MSE A 12 8 HET MSE A 28 8 HET MSE A 44 8 HET MSE A 121 8 HET MSE A 160 8 HET MSE A 199 8 HET MSE A 226 8 HET MSE B 12 8 HET MSE B 28 8 HET MSE B 44 8 HET MSE B 121 8 HET MSE B 160 8 HET MSE B 199 8 HET MSE B 226 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 14(C5 H11 N O2 SE) FORMUL 3 HOH *355(H2 O) HELIX 1 1 TYR A 4 ILE A 17 1 14 HELIX 2 2 ASP A 19 SER A 33 1 15 HELIX 3 3 SER A 38 ARG A 45 1 8 HELIX 4 4 GLU A 46 LEU A 48 5 3 HELIX 5 5 ILE A 59 PHE A 65 5 7 HELIX 6 6 ILE A 68 GLN A 74 5 7 HELIX 7 7 PRO A 76 VAL A 81 5 6 HELIX 8 8 ASP A 110 MSE A 121 1 12 HELIX 9 9 HIS A 144 LEU A 157 1 14 HELIX 10 10 ASP A 167 GLU A 177 1 11 HELIX 11 11 ASP A 179 GLN A 201 1 23 HELIX 12 12 THR A 209 LEU A 217 1 9 HELIX 13 13 ARG A 219 LEU A 230 1 12 HELIX 14 14 ASN A 241 ILE A 252 1 12 HELIX 15 15 THR A 265 LEU A 268 5 4 HELIX 16 16 TYR B 4 ILE B 17 1 14 HELIX 17 17 ASP B 19 SER B 33 1 15 HELIX 18 18 SER B 38 ARG B 45 1 8 HELIX 19 19 GLU B 46 LEU B 48 5 3 HELIX 20 20 ILE B 59 PHE B 65 5 7 HELIX 21 21 ILE B 68 ARG B 73 5 6 HELIX 22 22 PRO B 76 VAL B 81 5 6 HELIX 23 23 TYR B 109 SER B 122 1 14 HELIX 24 24 HIS B 144 LEU B 157 1 14 HELIX 25 25 ASP B 167 SER B 176 1 10 HELIX 26 26 ASP B 179 GLN B 201 1 23 HELIX 27 27 THR B 209 LEU B 217 1 9 HELIX 28 28 ARG B 219 LEU B 230 1 12 HELIX 29 29 ASN B 241 ILE B 252 1 12 HELIX 30 30 THR B 265 LEU B 268 5 4 SHEET 1 A 2 PRO A 91 SER A 96 0 SHEET 2 A 2 LYS A 104 TYR A 109 -1 O LYS A 104 N SER A 96 SHEET 1 B11 PHE A 161 SER A 163 0 SHEET 2 B11 ASN A 134 ALA A 137 1 N THR A 135 O PHE A 162 SHEET 3 B11 ILE A 203 THR A 208 1 O PHE A 205 N LEU A 136 SHEET 4 B11 GLN A 232 GLY A 236 1 O THR A 234 N LEU A 206 SHEET 5 B11 GLU A 257 SER A 264 1 O GLU A 257 N ILE A 233 SHEET 6 B11 GLY A 269 SER A 273 -1 O GLY A 269 N SER A 264 SHEET 7 B11 ILE A 284 ASP A 286 -1 O ASP A 286 N ARG A 272 SHEET 8 B11 ARG A 346 PRO A 352 -1 O LEU A 347 N TYR A 285 SHEET 9 B11 PHE A 323 LEU A 336 -1 N ILE A 334 O ALA A 348 SHEET 10 B11 ARG A 310 LEU A 318 -1 N VAL A 315 O VAL A 327 SHEET 11 B11 ILE A 292 VAL A 297 -1 N VAL A 297 O ASN A 312 SHEET 1 C 2 GLN B 92 SER B 96 0 SHEET 2 C 2 LYS B 104 ALA B 108 -1 O LYS B 104 N SER B 96 SHEET 1 D11 PHE B 161 SER B 163 0 SHEET 2 D11 ASN B 134 ALA B 137 1 N ALA B 137 O PHE B 162 SHEET 3 D11 ILE B 203 THR B 208 1 O PHE B 205 N LEU B 136 SHEET 4 D11 GLN B 232 GLY B 236 1 O THR B 234 N LEU B 206 SHEET 5 D11 GLU B 257 SER B 264 1 O SER B 261 N LEU B 235 SHEET 6 D11 GLY B 269 SER B 273 -1 O GLY B 269 N SER B 264 SHEET 7 D11 ILE B 284 ASP B 286 -1 O ASP B 286 N ARG B 272 SHEET 8 D11 ARG B 346 PRO B 352 -1 O LEU B 347 N TYR B 285 SHEET 9 D11 PHE B 323 LEU B 336 -1 N LEU B 336 O ARG B 346 SHEET 10 D11 ARG B 310 LEU B 318 -1 N VAL B 315 O VAL B 327 SHEET 11 D11 ILE B 292 VAL B 297 -1 N VAL B 297 O ASN B 312 LINK C VAL A 11 N MSE A 12 1555 1555 1.32 LINK C MSE A 12 N LYS A 13 1555 1555 1.34 LINK C LEU A 27 N MSE A 28 1555 1555 1.34 LINK C MSE A 28 N ARG A 29 1555 1555 1.34 LINK C GLY A 43 N MSE A 44 1555 1555 1.34 LINK C MSE A 44 N ARG A 45 1555 1555 1.33 LINK C ARG A 120 N MSE A 121 1555 1555 1.31 LINK C MSE A 121 N SER A 122 1555 1555 1.32 LINK C GLY A 159 N MSE A 160 1555 1555 1.32 LINK C MSE A 160 N PHE A 161 1555 1555 1.31 LINK C LEU A 198 N MSE A 199 1555 1555 1.35 LINK C MSE A 199 N ASN A 200 1555 1555 1.33 LINK C GLN A 225 N MSE A 226 1555 1555 1.34 LINK C MSE A 226 N LYS A 227 1555 1555 1.33 LINK C VAL B 11 N MSE B 12 1555 1555 1.32 LINK C MSE B 12 N LYS B 13 1555 1555 1.32 LINK C LEU B 27 N MSE B 28 1555 1555 1.34 LINK C MSE B 28 N ARG B 29 1555 1555 1.34 LINK C GLY B 43 N MSE B 44 1555 1555 1.32 LINK C MSE B 44 N ARG B 45 1555 1555 1.33 LINK C ARG B 120 N MSE B 121 1555 1555 1.32 LINK C MSE B 121 N SER B 122 1555 1555 1.32 LINK C GLY B 159 N MSE B 160 1555 1555 1.33 LINK C MSE B 160 N PHE B 161 1555 1555 1.32 LINK C LEU B 198 N MSE B 199 1555 1555 1.33 LINK C MSE B 199 N ASN B 200 1555 1555 1.33 LINK C GLN B 225 N MSE B 226 1555 1555 1.34 LINK C MSE B 226 N LYS B 227 1555 1555 1.34 CISPEP 1 THR A 100 GLY A 101 0 2.42 CISPEP 2 SER A 289 PRO A 290 0 3.62 CISPEP 3 GLY B 97 GLY B 98 0 -14.96 CISPEP 4 SER B 289 PRO B 290 0 1.80 CRYST1 68.836 110.143 112.044 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014527 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009079 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008925 0.00000