HEADER TRANSFERASE 20-MAY-09 3HIH TITLE STRUCTURE OF HUMAN PLK1-PBD WITH GLYCEROL AND SULFATE IN THE TITLE 2 PHOPHOPEPTIDE BINDING SITE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE PLK1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: POLO-LIKE KINASE 1, PLK-1, SERINE/THREONINE-PROTEIN KINASE COMPND 5 13, STPK13; COMPND 6 EC: 2.7.11.21; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PLK, PLK1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PDEST-527 KEYWDS KINASE, PHOSPHOPEPTIDE-BINDING DOMAIN, TRANSFERASE, SERINE THREONINE KEYWDS 2 PROTEIN KINASE, ATP-BINDING, CELL CYCLE, CELL DIVISION, MITOSIS, KEYWDS 3 NUCLEOTIDE-BINDING, NUCLEUS, PHOSPHOPROTEIN, SERINE/THREONINE- KEYWDS 4 PROTEIN KINASE EXPDTA X-RAY DIFFRACTION AUTHOR A.WLODAWER,T.MOULAEI REVDAT 5 21-FEB-24 3HIH 1 REMARK REVDAT 4 13-JUL-11 3HIH 1 VERSN REVDAT 3 18-AUG-09 3HIH 1 JRNL REVDAT 2 11-AUG-09 3HIH 1 JRNL REVDAT 1 09-JUN-09 3HIH 0 JRNL AUTH S.M.YUN,T.MOULAEI,D.LIM,J.K.BANG,J.E.PARK,S.R.SHENOY,F.LIU, JRNL AUTH 2 Y.H.KANG,C.LIAO,N.K.SOUNG,S.LEE,D.Y.YOON,Y.LIM,D.H.LEE, JRNL AUTH 3 A.OTAKA,E.APPELLA,J.B.MCMAHON,M.C.NICKLAUS,T.R.BURKE, JRNL AUTH 4 M.B.YAFFE,A.WLODAWER,K.S.LEE JRNL TITL STRUCTURAL AND FUNCTIONAL ANALYSES OF MINIMAL JRNL TITL 2 PHOSPHOPEPTIDES TARGETING THE POLO-BOX DOMAIN OF POLO-LIKE JRNL TITL 3 KINASE 1. JRNL REF NAT.STRUCT.MOL.BIOL. V. 16 876 2009 JRNL REFN ISSN 1545-9993 JRNL PMID 19597481 JRNL DOI 10.1038/NSMB.1628 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 48194 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.600 REMARK 3 FREE R VALUE TEST SET COUNT : 1271 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3080 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 84.73 REMARK 3 BIN R VALUE (WORKING SET) : 0.2440 REMARK 3 BIN FREE R VALUE SET COUNT : 84 REMARK 3 BIN FREE R VALUE : 0.2900 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3446 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 63 REMARK 3 SOLVENT ATOMS : 325 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.65000 REMARK 3 B22 (A**2) : -0.29000 REMARK 3 B33 (A**2) : 0.98000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.30000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.111 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.107 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.074 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.216 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3628 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4907 ; 1.551 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 435 ; 6.373 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 151 ;27.585 ;23.179 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 626 ;13.769 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;21.193 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 563 ; 0.118 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2626 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1746 ; 0.221 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2530 ; 0.307 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 271 ; 0.155 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 63 ; 0.231 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 29 ; 0.158 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2255 ; 1.170 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3560 ; 1.946 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1569 ; 2.900 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1347 ; 4.049 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3HIH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-MAY-09. REMARK 100 THE DEPOSITION ID IS D_1000053174. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-AUG-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 300 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49465 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 85.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : 0.25900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M LITHIUM SULFATE MONOHYDRATE, 0.1 REMARK 280 M BIS-TRIS, 25% W/V PEG 3350, PH 5.5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 51.15000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR B 498 REMARK 465 PRO B 499 REMARK 465 GLU B 501 REMARK 465 GLY B 502 REMARK 465 ASP B 503 REMARK 465 GLU B 504 REMARK 465 LEU B 505 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 CYS A 372 SG REMARK 470 GLN A 379 CD OE1 NE2 REMARK 470 HIS A 382 ND1 CE1 NE2 REMARK 470 ASP A 419 OD1 OD2 REMARK 470 ARG A 456 CG CD NE CZ NH1 NH2 REMARK 470 MET A 473 SD CE REMARK 470 LYS A 474 CD CE NZ REMARK 470 ASP A 503 CG OD1 OD2 REMARK 470 GLU A 504 CG CD OE1 OE2 REMARK 470 GLN A 536 CG CD OE1 NE2 REMARK 470 GLU A 555 CG CD OE1 OE2 REMARK 470 LYS A 556 NZ REMARK 470 ASP A 558 OD1 OD2 REMARK 470 ARG A 560 NH1 NH2 REMARK 470 ARG A 563 NH2 REMARK 470 LYS A 574 CD CE NZ REMARK 470 GLU A 575 CD OE1 OE2 REMARK 470 ARG A 584 NH1 NH2 REMARK 470 LYS A 589 CE NZ REMARK 470 CYS B 372 SG REMARK 470 LYS B 388 CE NZ REMARK 470 GLU B 391 OE1 OE2 REMARK 470 ASP B 419 OD1 OD2 REMARK 470 LYS B 420 NZ REMARK 470 VAL B 432 N CA C O REMARK 470 GLU B 455 OE1 OE2 REMARK 470 ARG B 456 CD NE CZ NH1 NH2 REMARK 470 LYS B 474 CD CE NZ REMARK 470 GLU B 488 N CA C O REMARK 470 LYS B 492 NZ REMARK 470 ALA B 495 CB REMARK 470 ASN B 496 CB CG OD1 ND2 REMARK 470 ARG B 507 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 512 NH1 REMARK 470 GLN B 536 CD OE1 NE2 REMARK 470 GLU B 555 CG CD OE1 OE2 REMARK 470 LYS B 556 CG CD CE NZ REMARK 470 ARG B 557 NE CZ NH1 NH2 REMARK 470 ASP B 558 OD1 OD2 REMARK 470 ARG B 560 NE CZ NH1 NH2 REMARK 470 ARG B 563 CD NE CZ NH1 NH2 REMARK 470 GLU B 575 CD OE1 OE2 REMARK 470 SER B 578 N CA C O REMARK 470 LYS B 589 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 423 CA - CB - CG ANGL. DEV. = -14.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 420 -41.38 -140.34 REMARK 500 ASP A 449 -32.90 -139.54 REMARK 500 HIS A 468 62.46 31.67 REMARK 500 LYS B 420 -41.64 -136.84 REMARK 500 ASN B 430 -0.12 68.29 REMARK 500 ASP B 449 -36.32 -136.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 7 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 8 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 10 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 12 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 9 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 11 DBREF 3HIH A 371 593 UNP P53350 PLK1_HUMAN 371 593 DBREF 3HIH B 371 593 UNP P53350 PLK1_HUMAN 371 593 SEQRES 1 A 223 ASP CYS HIS LEU SER ASP MET LEU GLN GLN LEU HIS SER SEQRES 2 A 223 VAL ASN ALA SER LYS PRO SER GLU ARG GLY LEU VAL ARG SEQRES 3 A 223 GLN GLU GLU ALA GLU ASP PRO ALA CYS ILE PRO ILE PHE SEQRES 4 A 223 TRP VAL SER LYS TRP VAL ASP TYR SER ASP LYS TYR GLY SEQRES 5 A 223 LEU GLY TYR GLN LEU CYS ASP ASN SER VAL GLY VAL LEU SEQRES 6 A 223 PHE ASN ASP SER THR ARG LEU ILE LEU TYR ASN ASP GLY SEQRES 7 A 223 ASP SER LEU GLN TYR ILE GLU ARG ASP GLY THR GLU SER SEQRES 8 A 223 TYR LEU THR VAL SER SER HIS PRO ASN SER LEU MET LYS SEQRES 9 A 223 LYS ILE THR LEU LEU LYS TYR PHE ARG ASN TYR MET SER SEQRES 10 A 223 GLU HIS LEU LEU LYS ALA GLY ALA ASN ILE THR PRO ARG SEQRES 11 A 223 GLU GLY ASP GLU LEU ALA ARG LEU PRO TYR LEU ARG THR SEQRES 12 A 223 TRP PHE ARG THR ARG SER ALA ILE ILE LEU HIS LEU SER SEQRES 13 A 223 ASN GLY SER VAL GLN ILE ASN PHE PHE GLN ASP HIS THR SEQRES 14 A 223 LYS LEU ILE LEU CYS PRO LEU MET ALA ALA VAL THR TYR SEQRES 15 A 223 ILE ASP GLU LYS ARG ASP PHE ARG THR TYR ARG LEU SER SEQRES 16 A 223 LEU LEU GLU GLU TYR GLY CYS CYS LYS GLU LEU ALA SER SEQRES 17 A 223 ARG LEU ARG TYR ALA ARG THR MET VAL ASP LYS LEU LEU SEQRES 18 A 223 SER SER SEQRES 1 B 223 ASP CYS HIS LEU SER ASP MET LEU GLN GLN LEU HIS SER SEQRES 2 B 223 VAL ASN ALA SER LYS PRO SER GLU ARG GLY LEU VAL ARG SEQRES 3 B 223 GLN GLU GLU ALA GLU ASP PRO ALA CYS ILE PRO ILE PHE SEQRES 4 B 223 TRP VAL SER LYS TRP VAL ASP TYR SER ASP LYS TYR GLY SEQRES 5 B 223 LEU GLY TYR GLN LEU CYS ASP ASN SER VAL GLY VAL LEU SEQRES 6 B 223 PHE ASN ASP SER THR ARG LEU ILE LEU TYR ASN ASP GLY SEQRES 7 B 223 ASP SER LEU GLN TYR ILE GLU ARG ASP GLY THR GLU SER SEQRES 8 B 223 TYR LEU THR VAL SER SER HIS PRO ASN SER LEU MET LYS SEQRES 9 B 223 LYS ILE THR LEU LEU LYS TYR PHE ARG ASN TYR MET SER SEQRES 10 B 223 GLU HIS LEU LEU LYS ALA GLY ALA ASN ILE THR PRO ARG SEQRES 11 B 223 GLU GLY ASP GLU LEU ALA ARG LEU PRO TYR LEU ARG THR SEQRES 12 B 223 TRP PHE ARG THR ARG SER ALA ILE ILE LEU HIS LEU SER SEQRES 13 B 223 ASN GLY SER VAL GLN ILE ASN PHE PHE GLN ASP HIS THR SEQRES 14 B 223 LYS LEU ILE LEU CYS PRO LEU MET ALA ALA VAL THR TYR SEQRES 15 B 223 ILE ASP GLU LYS ARG ASP PHE ARG THR TYR ARG LEU SER SEQRES 16 B 223 LEU LEU GLU GLU TYR GLY CYS CYS LYS GLU LEU ALA SER SEQRES 17 B 223 ARG LEU ARG TYR ALA ARG THR MET VAL ASP LYS LEU LEU SEQRES 18 B 223 SER SER HET SO4 A 1 5 HET SO4 A 2 5 HET SO4 A 3 5 HET GOL A 6 7 HET GOL A 7 6 HET GOL A 8 6 HET GOL A 10 6 HET EDO A 12 4 HET SO4 B 4 5 HET SO4 B 5 5 HET GOL B 9 6 HET EDO B 11 4 HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETNAM EDO 1,2-ETHANEDIOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 SO4 5(O4 S 2-) FORMUL 6 GOL 5(C3 H8 O3) FORMUL 10 EDO 2(C2 H6 O2) FORMUL 15 HOH *325(H2 O) HELIX 1 1 ASP A 371 SER A 387 1 17 HELIX 2 2 ARG A 396 GLU A 401 5 6 HELIX 3 3 ASP A 402 ILE A 406 5 5 HELIX 4 4 SER A 466 HIS A 468 5 3 HELIX 5 5 PRO A 469 SER A 471 5 3 HELIX 6 6 LEU A 472 LEU A 490 1 19 HELIX 7 7 LEU A 564 GLY A 571 1 8 HELIX 8 8 CYS A 573 SER A 593 1 21 HELIX 9 9 ASP B 371 SER B 387 1 17 HELIX 10 10 LYS B 388 ARG B 392 5 5 HELIX 11 11 ARG B 396 GLU B 401 5 6 HELIX 12 12 ASP B 402 ILE B 406 5 5 HELIX 13 13 SER B 466 HIS B 468 5 3 HELIX 14 14 PRO B 469 SER B 471 5 3 HELIX 15 15 LEU B 472 SER B 487 1 16 HELIX 16 16 LEU B 564 GLY B 571 1 8 HELIX 17 17 ARG B 579 SER B 593 1 15 SHEET 1 A 6 VAL A 411 ASP A 416 0 SHEET 2 A 6 GLY A 422 LEU A 427 -1 O GLN A 426 N LYS A 413 SHEET 3 A 6 VAL A 432 PHE A 436 -1 O GLY A 433 N TYR A 425 SHEET 4 A 6 ARG A 441 LEU A 444 -1 O LEU A 444 N VAL A 432 SHEET 5 A 6 SER A 450 ILE A 454 -1 O ILE A 454 N ARG A 441 SHEET 6 A 6 GLU A 460 THR A 464 -1 O LEU A 463 N LEU A 451 SHEET 1 B 6 LEU A 511 ARG A 516 0 SHEET 2 B 6 ALA A 520 LEU A 525 -1 O HIS A 524 N THR A 513 SHEET 3 B 6 VAL A 530 PHE A 534 -1 O GLN A 531 N LEU A 523 SHEET 4 B 6 LYS A 540 CYS A 544 -1 O LEU A 543 N VAL A 530 SHEET 5 B 6 ALA A 549 ILE A 553 -1 O ILE A 553 N LYS A 540 SHEET 6 B 6 PHE A 559 ARG A 563 -1 O TYR A 562 N VAL A 550 SHEET 1 C 6 VAL B 411 ASP B 416 0 SHEET 2 C 6 GLY B 422 LEU B 427 -1 O GLN B 426 N SER B 412 SHEET 3 C 6 VAL B 434 PHE B 436 -1 O LEU B 435 N LEU B 423 SHEET 4 C 6 ARG B 441 LEU B 444 -1 O LEU B 442 N VAL B 434 SHEET 5 C 6 SER B 450 ILE B 454 -1 O GLN B 452 N ILE B 443 SHEET 6 C 6 GLU B 460 THR B 464 -1 O LEU B 463 N LEU B 451 SHEET 1 D 6 LEU B 511 ARG B 516 0 SHEET 2 D 6 ALA B 520 LEU B 525 -1 O HIS B 524 N THR B 513 SHEET 3 D 6 VAL B 530 PHE B 534 -1 O GLN B 531 N LEU B 523 SHEET 4 D 6 LYS B 540 CYS B 544 -1 O LEU B 543 N VAL B 530 SHEET 5 D 6 ALA B 549 ILE B 553 -1 O ILE B 553 N LYS B 540 SHEET 6 D 6 PHE B 559 ARG B 563 -1 O TYR B 562 N VAL B 550 CISPEP 1 ARG B 456 ASP B 457 0 -2.96 SITE 1 AC1 7 GOL A 6 HOH A 58 HOH A 80 GLU A 460 SITE 2 AC1 7 ARG A 507 HIS A 538 LYS A 540 SITE 1 AC2 6 GOL A 8 TYR A 445 TYR A 462 ARG A 507 SITE 2 AC2 6 LEU A 508 ARG A 557 SITE 1 AC3 4 THR A 517 ARG A 518 SER A 519 TYR A 582 SITE 1 AC4 10 SO4 A 1 HOH A 15 HOH A 58 HOH A 80 SITE 2 AC4 10 HOH A 110 LYS A 413 TRP A 414 THR A 459 SITE 3 AC4 10 GLU A 460 LEU A 490 SITE 1 AC5 6 HOH A 116 HOH A 186 PHE A 436 ASN A 437 SITE 2 AC5 6 ASP A 438 LEU A 478 SITE 1 AC6 3 SO4 A 2 HOH A 31 TYR A 462 SITE 1 AC7 5 HOH A 4 ASN A 430 LEU A 444 ARG A 483 SITE 2 AC7 5 HOH A 598 SITE 1 AC8 3 HOH A 82 HOH A 315 TRP A 514 SITE 1 AC9 6 GLU A 501 GLY A 502 HOH B 158 HIS B 382 SITE 2 AC9 6 ASN B 385 ARG B 584 SITE 1 BC1 3 HOH B 84 HIS B 538 LYS B 540 SITE 1 BC2 4 HOH B 123 LEU B 463 THR B 464 SER B 467 SITE 1 BC3 3 PHE B 436 ASN B 437 ASP B 438 CRYST1 33.300 102.300 68.500 90.00 93.20 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.030030 0.000000 0.001679 0.00000 SCALE2 0.000000 0.009775 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014621 0.00000