HEADER TRANSFERASE 20-MAY-09 3HJ4 TITLE MINOR EDITOSOME-ASSOCIATED TUTASE 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MINOR EDITOSOME-ASSOCIATED TUTASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRYPANOSOMA BRUCEI; SOURCE 3 ORGANISM_TAXID: 5691; SOURCE 4 GENE: TB927.1.1330; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: B834(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET21B KEYWDS TUTASE, NUCLEOTIDYLTRANSFERASE, TRYPANOSOMA, EDITOSOME, RNA EDITING, KEYWDS 2 UTP-BINDING, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.STAGNO,H.LUECKE REVDAT 4 20-NOV-24 3HJ4 1 SEQADV LINK REVDAT 3 01-NOV-17 3HJ4 1 REMARK REVDAT 2 18-AUG-10 3HJ4 1 JRNL REVDAT 1 12-MAY-10 3HJ4 0 JRNL AUTH J.STAGNO,I.APHASIZHEVA,J.BRUYSTENS,H.LUECKE,R.APHASIZHEV JRNL TITL STRUCTURE OF THE MITOCHONDRIAL EDITOSOME-LIKE COMPLEX JRNL TITL 2 ASSOCIATED TUTASE 1 REVEALS DIVERGENT MECHANISMS OF UTP JRNL TITL 3 SELECTION AND DOMAIN ORGANIZATION. JRNL REF J.MOL.BIOL. V. 399 464 2010 JRNL REFN ISSN 0022-2836 JRNL PMID 20403364 JRNL DOI 10.1016/J.JMB.2010.04.021 REMARK 2 REMARK 2 RESOLUTION. 1.56 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.56 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.41 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 108165 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5426 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.56 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.60 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6883 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.08 REMARK 3 BIN R VALUE (WORKING SET) : 0.2890 REMARK 3 BIN FREE R VALUE SET COUNT : 355 REMARK 3 BIN FREE R VALUE : 0.3170 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6182 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 879 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.29000 REMARK 3 B22 (A**2) : -1.29000 REMARK 3 B33 (A**2) : 1.57000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 2.09000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.111 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.085 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.060 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.811 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.953 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6391 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 4465 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8651 ; 1.368 ; 1.947 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10789 ; 0.923 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 788 ; 5.575 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 332 ;32.698 ;23.133 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1118 ;14.232 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 62 ;16.953 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 928 ; 0.081 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7186 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1398 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3852 ; 1.070 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1552 ; 0.383 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6248 ; 1.813 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2539 ; 2.996 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2392 ; 4.665 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 10856 ; 1.362 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 879 ; 5.066 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 10702 ; 2.077 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 382 6 REMARK 3 1 B 1 B 382 6 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 LOOSE POSITIONAL 1 A (A): 5267 ; 0.340 ; 5.000 REMARK 3 LOOSE THERMAL 1 B (A**2): 5267 ; 1.430 ;10.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -10 A 9999 REMARK 3 ORIGIN FOR THE GROUP (A): 60.2130 14.2432 2.0128 REMARK 3 T TENSOR REMARK 3 T11: 0.0272 T22: 0.0280 REMARK 3 T33: 0.0190 T12: 0.0034 REMARK 3 T13: -0.0164 T23: -0.0036 REMARK 3 L TENSOR REMARK 3 L11: 0.3517 L22: 0.6454 REMARK 3 L33: 0.2841 L12: 0.1744 REMARK 3 L13: -0.2527 L23: -0.3117 REMARK 3 S TENSOR REMARK 3 S11: 0.0066 S12: -0.0039 S13: 0.0274 REMARK 3 S21: 0.0400 S22: 0.0177 S23: 0.0465 REMARK 3 S31: -0.0244 S32: -0.0068 S33: -0.0242 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -10 B 9999 REMARK 3 ORIGIN FOR THE GROUP (A): 22.7551 38.8927 28.6486 REMARK 3 T TENSOR REMARK 3 T11: 0.0218 T22: 0.0311 REMARK 3 T33: 0.0178 T12: 0.0055 REMARK 3 T13: -0.0183 T23: -0.0024 REMARK 3 L TENSOR REMARK 3 L11: 0.3739 L22: 0.2121 REMARK 3 L33: 0.2465 L12: 0.1340 REMARK 3 L13: -0.2220 L23: -0.0151 REMARK 3 S TENSOR REMARK 3 S11: 0.0015 S12: 0.0123 S13: -0.0245 REMARK 3 S21: -0.0097 S22: -0.0048 S23: -0.0071 REMARK 3 S31: 0.0035 S32: 0.0084 S33: 0.0033 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 4 REMARK 4 3HJ4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-JUN-09. REMARK 100 THE DEPOSITION ID IS D_1000053195. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-APR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.97945 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 108380 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.560 REMARK 200 RESOLUTION RANGE LOW (A) : 99.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.1810 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.56 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.62 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : 0.53100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M LITHIUM ACETATE, 25% PEG 3350, PH REMARK 280 8.0, VAPOR DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 51.01350 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 VAL A 384 REMARK 465 PRO A 385 REMARK 465 MSE B 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MSE A 93 CG - SE - CE ANGL. DEV. = -14.0 DEGREES REMARK 500 ARG B 293 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 152 87.18 -169.02 REMARK 500 ALA A 174 74.20 -161.86 REMARK 500 THR A 179 -160.53 -101.53 REMARK 500 ASN A 338 4.54 -156.26 REMARK 500 ILE A 366 -63.12 -109.29 REMARK 500 PHE B 152 85.89 -168.77 REMARK 500 ALA B 174 72.39 -163.40 REMARK 500 SER B 178 50.13 39.99 REMARK 500 THR B 179 -155.91 -103.20 REMARK 500 ASN B 338 6.93 -154.24 REMARK 500 TYR B 339 15.73 57.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3HIY RELATED DB: PDB REMARK 900 MINOR EDITOSOME-ASSOCIATED TUTASE1 WITH BOUND UTP AND MG REMARK 900 RELATED ID: 3HJ1 RELATED DB: PDB REMARK 900 MINOR EDITOSOME-ASSOCIATED TUTASE1 WITH BOUND UTP DBREF 3HJ4 A 1 385 UNP Q4GZ86 Q4GZ86_9TRYP 1 385 DBREF 3HJ4 B 1 385 UNP Q4GZ86 Q4GZ86_9TRYP 1 385 SEQADV 3HJ4 A UNP Q4GZ86 ASN 2 DELETION SEQADV 3HJ4 B UNP Q4GZ86 ASN 2 DELETION SEQRES 1 A 384 MSE VAL ALA LYS ARG GLU PHE ILE ARG GLY MSE MSE ALA SEQRES 2 A 384 HIS TYR ARG ALA SER LEU PRO PRO PRO GLU HIS SER VAL SEQRES 3 A 384 VAL ILE HIS GLU LEU GLN LYS ARG VAL LEU ASP ILE GLY SEQRES 4 A 384 MSE LEU ALA VAL ASN LYS ALA HIS VAL GLU LEU PHE GLY SEQRES 5 A 384 SER HIS VAL SER GLY PHE CYS THR PRO HIS SER ASP ALA SEQRES 6 A 384 ASP ILE SER LEU THR TYR ARG ASN PHE SER PRO TRP LEU SEQRES 7 A 384 GLN GLY MSE GLU ARG VAL ASP GLU GLN ASN ASN LYS ARG SEQRES 8 A 384 MSE THR ARG PHE GLY LYS GLU ALA SER ALA MSE GLY MSE SEQRES 9 A 384 GLU ASP VAL ARG TYR ILE ARG ALA ARG ILE PRO VAL VAL SEQRES 10 A 384 GLN PHE THR ASP GLY VAL THR GLY ILE HIS CYS ASP VAL SEQRES 11 A 384 SER ILE GLY ASN ILE GLY GLY VAL GLU ASN SER LYS ILE SEQRES 12 A 384 LEU CYS ALA ILE ARG GLN VAL PHE PRO ASP PHE TYR GLY SEQRES 13 A 384 ALA TYR ILE HIS LEU VAL LYS ALA TRP GLY LYS ALA ARG SEQRES 14 A 384 GLU VAL ILE ALA PRO GLU ARG SER THR PHE ASN SER PHE SEQRES 15 A 384 THR VAL THR THR MSE ALA LEU MSE VAL LEU GLN GLU LEU SEQRES 16 A 384 GLY LEU LEU PRO VAL PHE SER LYS PRO THR GLY GLU PHE SEQRES 17 A 384 GLY GLU LEU THR VAL ALA ASP ALA GLU MSE LEU LEU GLN SEQRES 18 A 384 GLU PHE LYS LEU PRO PRO ILE TYR ASP SER LEU HIS ASP SEQRES 19 A 384 ASP ASP GLU LYS LEU GLY GLU ALA VAL PHE PHE CYS LEU SEQRES 20 A 384 GLN ARG PHE ALA GLU TYR TYR ALA LYS TYR ASP PHE SER SEQRES 21 A 384 ALA GLY THR VAL SER LEU ILE HIS PRO ARG ARG HIS ARG SEQRES 22 A 384 THR VAL TYR GLU ARG VAL VAL ARG ARG HIS LEU GLU LEU SEQRES 23 A 384 LEU GLY SER ARG LYS ARG LEU GLU TRP GLU LYS HIS ILE SEQRES 24 A 384 ALA GLU HIS LYS GLU ASP GLY PRO LEU ASP GLU ASN ASP SEQRES 25 A 384 PHE SER ALA SER MSE GLN ASN GLU THR THR GLN ARG PRO SEQRES 26 A 384 SER ASN SER PRO TYR VAL VAL GLU ASP PHE VAL ASN TYR SEQRES 27 A 384 VAL ASN CYS GLY ARG ARG VAL GLN ALA SER ARG VAL ARG SEQRES 28 A 384 HIS ILE GLN GLN GLU PHE ASN ARG LEU ARG GLU MSE LEU SEQRES 29 A 384 ILE ASP LYS GLU SER GLU LEU LYS PHE ASP GLU VAL PHE SEQRES 30 A 384 ARG GLU SER ASP THR VAL PRO SEQRES 1 B 384 MSE VAL ALA LYS ARG GLU PHE ILE ARG GLY MSE MSE ALA SEQRES 2 B 384 HIS TYR ARG ALA SER LEU PRO PRO PRO GLU HIS SER VAL SEQRES 3 B 384 VAL ILE HIS GLU LEU GLN LYS ARG VAL LEU ASP ILE GLY SEQRES 4 B 384 MSE LEU ALA VAL ASN LYS ALA HIS VAL GLU LEU PHE GLY SEQRES 5 B 384 SER HIS VAL SER GLY PHE CYS THR PRO HIS SER ASP ALA SEQRES 6 B 384 ASP ILE SER LEU THR TYR ARG ASN PHE SER PRO TRP LEU SEQRES 7 B 384 GLN GLY MSE GLU ARG VAL ASP GLU GLN ASN ASN LYS ARG SEQRES 8 B 384 MSE THR ARG PHE GLY LYS GLU ALA SER ALA MSE GLY MSE SEQRES 9 B 384 GLU ASP VAL ARG TYR ILE ARG ALA ARG ILE PRO VAL VAL SEQRES 10 B 384 GLN PHE THR ASP GLY VAL THR GLY ILE HIS CYS ASP VAL SEQRES 11 B 384 SER ILE GLY ASN ILE GLY GLY VAL GLU ASN SER LYS ILE SEQRES 12 B 384 LEU CYS ALA ILE ARG GLN VAL PHE PRO ASP PHE TYR GLY SEQRES 13 B 384 ALA TYR ILE HIS LEU VAL LYS ALA TRP GLY LYS ALA ARG SEQRES 14 B 384 GLU VAL ILE ALA PRO GLU ARG SER THR PHE ASN SER PHE SEQRES 15 B 384 THR VAL THR THR MSE ALA LEU MSE VAL LEU GLN GLU LEU SEQRES 16 B 384 GLY LEU LEU PRO VAL PHE SER LYS PRO THR GLY GLU PHE SEQRES 17 B 384 GLY GLU LEU THR VAL ALA ASP ALA GLU MSE LEU LEU GLN SEQRES 18 B 384 GLU PHE LYS LEU PRO PRO ILE TYR ASP SER LEU HIS ASP SEQRES 19 B 384 ASP ASP GLU LYS LEU GLY GLU ALA VAL PHE PHE CYS LEU SEQRES 20 B 384 GLN ARG PHE ALA GLU TYR TYR ALA LYS TYR ASP PHE SER SEQRES 21 B 384 ALA GLY THR VAL SER LEU ILE HIS PRO ARG ARG HIS ARG SEQRES 22 B 384 THR VAL TYR GLU ARG VAL VAL ARG ARG HIS LEU GLU LEU SEQRES 23 B 384 LEU GLY SER ARG LYS ARG LEU GLU TRP GLU LYS HIS ILE SEQRES 24 B 384 ALA GLU HIS LYS GLU ASP GLY PRO LEU ASP GLU ASN ASP SEQRES 25 B 384 PHE SER ALA SER MSE GLN ASN GLU THR THR GLN ARG PRO SEQRES 26 B 384 SER ASN SER PRO TYR VAL VAL GLU ASP PHE VAL ASN TYR SEQRES 27 B 384 VAL ASN CYS GLY ARG ARG VAL GLN ALA SER ARG VAL ARG SEQRES 28 B 384 HIS ILE GLN GLN GLU PHE ASN ARG LEU ARG GLU MSE LEU SEQRES 29 B 384 ILE ASP LYS GLU SER GLU LEU LYS PHE ASP GLU VAL PHE SEQRES 30 B 384 ARG GLU SER ASP THR VAL PRO MODRES 3HJ4 MSE A 12 MET SELENOMETHIONINE MODRES 3HJ4 MSE A 13 MET SELENOMETHIONINE MODRES 3HJ4 MSE A 41 MET SELENOMETHIONINE MODRES 3HJ4 MSE A 82 MET SELENOMETHIONINE MODRES 3HJ4 MSE A 93 MET SELENOMETHIONINE MODRES 3HJ4 MSE A 103 MET SELENOMETHIONINE MODRES 3HJ4 MSE A 105 MET SELENOMETHIONINE MODRES 3HJ4 MSE A 188 MET SELENOMETHIONINE MODRES 3HJ4 MSE A 191 MET SELENOMETHIONINE MODRES 3HJ4 MSE A 219 MET SELENOMETHIONINE MODRES 3HJ4 MSE A 318 MET SELENOMETHIONINE MODRES 3HJ4 MSE A 364 MET SELENOMETHIONINE MODRES 3HJ4 MSE B 12 MET SELENOMETHIONINE MODRES 3HJ4 MSE B 13 MET SELENOMETHIONINE MODRES 3HJ4 MSE B 41 MET SELENOMETHIONINE MODRES 3HJ4 MSE B 82 MET SELENOMETHIONINE MODRES 3HJ4 MSE B 93 MET SELENOMETHIONINE MODRES 3HJ4 MSE B 103 MET SELENOMETHIONINE MODRES 3HJ4 MSE B 105 MET SELENOMETHIONINE MODRES 3HJ4 MSE B 188 MET SELENOMETHIONINE MODRES 3HJ4 MSE B 191 MET SELENOMETHIONINE MODRES 3HJ4 MSE B 219 MET SELENOMETHIONINE MODRES 3HJ4 MSE B 318 MET SELENOMETHIONINE MODRES 3HJ4 MSE B 364 MET SELENOMETHIONINE HET MSE A 12 8 HET MSE A 13 8 HET MSE A 41 8 HET MSE A 82 8 HET MSE A 93 8 HET MSE A 103 8 HET MSE A 105 8 HET MSE A 188 8 HET MSE A 191 8 HET MSE A 219 8 HET MSE A 318 8 HET MSE A 364 8 HET MSE B 12 8 HET MSE B 13 8 HET MSE B 41 8 HET MSE B 82 8 HET MSE B 93 8 HET MSE B 103 8 HET MSE B 105 8 HET MSE B 188 8 HET MSE B 191 8 HET MSE B 219 8 HET MSE B 318 8 HET MSE B 364 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 24(C5 H11 N O2 SE) FORMUL 3 HOH *879(H2 O) HELIX 1 1 VAL A 3 LEU A 20 1 18 HELIX 2 2 GLU A 24 VAL A 44 1 21 HELIX 3 3 GLY A 53 GLY A 58 1 6 HELIX 4 4 SER A 76 GLN A 80 5 5 HELIX 5 5 MSE A 82 GLY A 104 1 23 HELIX 6 6 ASN A 135 VAL A 151 1 17 HELIX 7 7 PHE A 152 ARG A 170 1 19 HELIX 8 8 ALA A 174 SER A 178 5 5 HELIX 9 9 ASN A 181 LEU A 196 1 16 HELIX 10 10 THR A 213 GLN A 222 1 10 HELIX 11 11 PRO A 227 LEU A 233 5 7 HELIX 12 12 ASP A 236 TYR A 258 1 23 HELIX 13 13 HIS A 273 HIS A 303 1 31 HELIX 14 14 LYS A 304 GLY A 307 5 4 HELIX 15 15 ASP A 310 GLN A 324 1 15 HELIX 16 16 GLN A 347 SER A 349 5 3 HELIX 17 17 ARG A 350 ILE A 366 1 17 HELIX 18 18 LYS A 368 LEU A 372 5 5 HELIX 19 19 LYS A 373 PHE A 378 1 6 HELIX 20 20 VAL B 3 LEU B 20 1 18 HELIX 21 21 GLU B 24 VAL B 44 1 21 HELIX 22 22 GLY B 53 GLY B 58 1 6 HELIX 23 23 MSE B 82 GLY B 104 1 23 HELIX 24 24 ASN B 135 VAL B 151 1 17 HELIX 25 25 PHE B 152 ARG B 170 1 19 HELIX 26 26 ALA B 174 SER B 178 5 5 HELIX 27 27 ASN B 181 LEU B 196 1 16 HELIX 28 28 THR B 213 PHE B 224 1 12 HELIX 29 29 PRO B 227 LEU B 233 5 7 HELIX 30 30 ASP B 236 TYR B 258 1 23 HELIX 31 31 HIS B 273 HIS B 303 1 31 HELIX 32 32 LYS B 304 GLY B 307 5 4 HELIX 33 33 ASP B 310 GLN B 324 1 15 HELIX 34 34 GLN B 347 SER B 349 5 3 HELIX 35 35 ARG B 350 ASP B 367 1 18 HELIX 36 36 LYS B 368 LEU B 372 5 5 HELIX 37 37 LYS B 373 PHE B 378 1 6 SHEET 1 A 5 HIS A 48 PHE A 52 0 SHEET 2 A 5 ALA A 66 THR A 71 -1 O SER A 69 N GLU A 50 SHEET 3 A 5 HIS A 128 ILE A 133 1 O HIS A 128 N ALA A 66 SHEET 4 A 5 VAL A 117 THR A 121 -1 N PHE A 120 O CYS A 129 SHEET 5 A 5 GLU A 106 ILE A 111 -1 N GLU A 106 O THR A 121 SHEET 1 B 5 HIS B 48 PHE B 52 0 SHEET 2 B 5 ALA B 66 THR B 71 -1 O SER B 69 N GLU B 50 SHEET 3 B 5 HIS B 128 ILE B 133 1 O ASP B 130 N ILE B 68 SHEET 4 B 5 VAL B 117 THR B 121 -1 N PHE B 120 O CYS B 129 SHEET 5 B 5 GLU B 106 ILE B 111 -1 N ARG B 109 O GLN B 119 LINK C GLY A 11 N MSE A 12 1555 1555 1.33 LINK C MSE A 12 N MSE A 13 1555 1555 1.33 LINK C MSE A 13 N ALA A 14 1555 1555 1.33 LINK C GLY A 40 N MSE A 41 1555 1555 1.33 LINK C MSE A 41 N LEU A 42 1555 1555 1.33 LINK C GLY A 81 N MSE A 82 1555 1555 1.33 LINK C MSE A 82 N GLU A 83 1555 1555 1.33 LINK C ARG A 92 N MSE A 93 1555 1555 1.34 LINK C MSE A 93 N THR A 94 1555 1555 1.33 LINK C ALA A 102 N MSE A 103 1555 1555 1.32 LINK C MSE A 103 N GLY A 104 1555 1555 1.33 LINK C GLY A 104 N MSE A 105 1555 1555 1.34 LINK C MSE A 105 N GLU A 106 1555 1555 1.33 LINK C THR A 187 N MSE A 188 1555 1555 1.31 LINK C MSE A 188 N ALA A 189 1555 1555 1.33 LINK C LEU A 190 N MSE A 191 1555 1555 1.33 LINK C MSE A 191 N VAL A 192 1555 1555 1.35 LINK C GLU A 218 N MSE A 219 1555 1555 1.33 LINK C MSE A 219 N LEU A 220 1555 1555 1.33 LINK C SER A 317 N MSE A 318 1555 1555 1.33 LINK C MSE A 318 N GLN A 319 1555 1555 1.33 LINK C GLU A 363 N MSE A 364 1555 1555 1.33 LINK C MSE A 364 N LEU A 365 1555 1555 1.33 LINK C GLY B 11 N MSE B 12 1555 1555 1.33 LINK C MSE B 12 N MSE B 13 1555 1555 1.33 LINK C MSE B 13 N ALA B 14 1555 1555 1.32 LINK C GLY B 40 N MSE B 41 1555 1555 1.34 LINK C MSE B 41 N LEU B 42 1555 1555 1.34 LINK C GLY B 81 N MSE B 82 1555 1555 1.33 LINK C MSE B 82 N GLU B 83 1555 1555 1.33 LINK C ARG B 92 N MSE B 93 1555 1555 1.33 LINK C MSE B 93 N THR B 94 1555 1555 1.32 LINK C ALA B 102 N MSE B 103 1555 1555 1.33 LINK C MSE B 103 N GLY B 104 1555 1555 1.34 LINK C GLY B 104 N MSE B 105 1555 1555 1.33 LINK C MSE B 105 N GLU B 106 1555 1555 1.33 LINK C THR B 187 N MSE B 188 1555 1555 1.33 LINK C MSE B 188 N ALA B 189 1555 1555 1.33 LINK C LEU B 190 N MSE B 191 1555 1555 1.32 LINK C MSE B 191 N VAL B 192 1555 1555 1.34 LINK C GLU B 218 N MSE B 219 1555 1555 1.33 LINK C MSE B 219 N LEU B 220 1555 1555 1.33 LINK C SER B 317 N MSE B 318 1555 1555 1.33 LINK C MSE B 318 N GLN B 319 1555 1555 1.33 LINK C AGLU B 363 N MSE B 364 1555 1555 1.33 LINK C BGLU B 363 N MSE B 364 1555 1555 1.33 LINK C MSE B 364 N LEU B 365 1555 1555 1.33 CISPEP 1 GLY A 307 PRO A 308 0 -5.59 CISPEP 2 GLY B 307 PRO B 308 0 -2.68 CRYST1 63.208 102.027 66.074 90.00 111.99 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015821 0.000000 0.006390 0.00000 SCALE2 0.000000 0.009801 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016322 0.00000