data_3HJ5 # _entry.id 3HJ5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3HJ5 RCSB RCSB053196 WWPDB D_1000053196 # _pdbx_database_status.entry_id 3HJ5 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-05-20 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lee, S.' 1 'Antony, L.' 2 'Hartmann, R.' 3 'Knaus, K.J.' 4 'Surewicz, K.' 5 'Surewicz, W.K.' 6 'Yee, V.C.' 7 # _citation.id primary _citation.title 'Conformational diversity in prion protein variants influences intermolecular beta-sheet formation.' _citation.journal_abbrev 'Embo J.' _citation.journal_volume 29 _citation.page_first 251 _citation.page_last 262 _citation.year 2010 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19927125 _citation.pdbx_database_id_DOI 10.1038/emboj.2009.333 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Lee, S.' 1 primary 'Antony, L.' 2 primary 'Hartmann, R.' 3 primary 'Knaus, K.J.' 4 primary 'Surewicz, K.' 5 primary 'Surewicz, W.K.' 6 primary 'Yee, V.C.' 7 # _cell.length_a 28.658 _cell.length_b 72.015 _cell.length_c 125.892 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3HJ5 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 3HJ5 _symmetry.Int_Tables_number 19 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Major prion protein' _entity.formula_weight 16136.933 _entity.pdbx_number_of_molecules 2 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'UNP residues 90-231' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PrP, PrP27-30, PrP33-35C, ASCR' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GQGGGTHSQWNKPSKPKTNMKHMAGAAAAGAVVGGLGGYVLGSAMSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPMDEY SNQNNFVHDCVNITIKQHTVTTTTKGENFTETDVKMMERVVEQMCITQYERESQAYYQRGSS ; _entity_poly.pdbx_seq_one_letter_code_can ;GQGGGTHSQWNKPSKPKTNMKHMAGAAAAGAVVGGLGGYVLGSAMSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPMDEY SNQNNFVHDCVNITIKQHTVTTTTKGENFTETDVKMMERVVEQMCITQYERESQAYYQRGSS ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 GLN n 1 3 GLY n 1 4 GLY n 1 5 GLY n 1 6 THR n 1 7 HIS n 1 8 SER n 1 9 GLN n 1 10 TRP n 1 11 ASN n 1 12 LYS n 1 13 PRO n 1 14 SER n 1 15 LYS n 1 16 PRO n 1 17 LYS n 1 18 THR n 1 19 ASN n 1 20 MET n 1 21 LYS n 1 22 HIS n 1 23 MET n 1 24 ALA n 1 25 GLY n 1 26 ALA n 1 27 ALA n 1 28 ALA n 1 29 ALA n 1 30 GLY n 1 31 ALA n 1 32 VAL n 1 33 VAL n 1 34 GLY n 1 35 GLY n 1 36 LEU n 1 37 GLY n 1 38 GLY n 1 39 TYR n 1 40 VAL n 1 41 LEU n 1 42 GLY n 1 43 SER n 1 44 ALA n 1 45 MET n 1 46 SER n 1 47 ARG n 1 48 PRO n 1 49 ILE n 1 50 ILE n 1 51 HIS n 1 52 PHE n 1 53 GLY n 1 54 SER n 1 55 ASP n 1 56 TYR n 1 57 GLU n 1 58 ASP n 1 59 ARG n 1 60 TYR n 1 61 TYR n 1 62 ARG n 1 63 GLU n 1 64 ASN n 1 65 MET n 1 66 HIS n 1 67 ARG n 1 68 TYR n 1 69 PRO n 1 70 ASN n 1 71 GLN n 1 72 VAL n 1 73 TYR n 1 74 TYR n 1 75 ARG n 1 76 PRO n 1 77 MET n 1 78 ASP n 1 79 GLU n 1 80 TYR n 1 81 SER n 1 82 ASN n 1 83 GLN n 1 84 ASN n 1 85 ASN n 1 86 PHE n 1 87 VAL n 1 88 HIS n 1 89 ASP n 1 90 CYS n 1 91 VAL n 1 92 ASN n 1 93 ILE n 1 94 THR n 1 95 ILE n 1 96 LYS n 1 97 GLN n 1 98 HIS n 1 99 THR n 1 100 VAL n 1 101 THR n 1 102 THR n 1 103 THR n 1 104 THR n 1 105 LYS n 1 106 GLY n 1 107 GLU n 1 108 ASN n 1 109 PHE n 1 110 THR n 1 111 GLU n 1 112 THR n 1 113 ASP n 1 114 VAL n 1 115 LYS n 1 116 MET n 1 117 MET n 1 118 GLU n 1 119 ARG n 1 120 VAL n 1 121 VAL n 1 122 GLU n 1 123 GLN n 1 124 MET n 1 125 CYS n 1 126 ILE n 1 127 THR n 1 128 GLN n 1 129 TYR n 1 130 GLU n 1 131 ARG n 1 132 GLU n 1 133 SER n 1 134 GLN n 1 135 ALA n 1 136 TYR n 1 137 TYR n 1 138 GLN n 1 139 ARG n 1 140 GLY n 1 141 SER n 1 142 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'PRNP, PRIP, PRP' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PRIO_HUMAN _struct_ref.pdbx_db_accession P04156 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GQGGGTHSQWNKPSKPKTNMKHMAGAAAAGAVVGGLGGYMLGSAMSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPMDEY SNQNNFVHDCVNITIKQHTVTTTTKGENFTETDVKMMERVVEQMCITQYERESQAYYQRGSS ; _struct_ref.pdbx_align_begin 90 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3HJ5 A 1 ? 142 ? P04156 90 ? 231 ? 90 231 2 1 3HJ5 B 1 ? 142 ? P04156 90 ? 231 ? 90 231 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3HJ5 VAL A 40 ? UNP P04156 MET 129 VARIANT 129 1 2 3HJ5 VAL B 40 ? UNP P04156 MET 129 VARIANT 129 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3HJ5 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.01 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 38.88 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '0.1 M Succinic acid, 15% PEG 6K, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2005-07-17 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0332 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0332 _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID # _reflns.entry_id 3HJ5 _reflns.d_resolution_high 3.100 _reflns.d_resolution_low 50.000 _reflns.number_obs 4758 _reflns.pdbx_Rmerge_I_obs 0.066 _reflns.pdbx_netI_over_sigmaI 16.390 _reflns.pdbx_chi_squared 1.006 _reflns.pdbx_redundancy 4.300 _reflns.percent_possible_obs 91.900 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 3.10 3.21 ? ? ? 0.277 ? ? 0.981 4.00 ? 375 73.00 ? 1 3.21 3.34 ? ? ? 0.224 ? ? 0.959 4.50 ? 375 78.00 ? 2 3.34 3.49 ? ? ? 0.165 ? ? 1.069 4.40 ? 446 87.10 ? 3 3.49 3.68 ? ? ? 0.108 ? ? 1.008 4.40 ? 457 91.40 ? 4 3.68 3.91 ? ? ? 0.089 ? ? 1.014 4.40 ? 486 97.20 ? 5 3.91 4.21 ? ? ? 0.078 ? ? 1.033 4.40 ? 511 98.80 ? 6 4.21 4.63 ? ? ? 0.055 ? ? 0.984 4.40 ? 511 100.00 ? 7 4.63 5.30 ? ? ? 0.054 ? ? 0.957 4.40 ? 511 99.80 ? 8 5.30 6.67 ? ? ? 0.059 ? ? 1.022 4.20 ? 536 99.10 ? 9 6.67 50.00 ? ? ? 0.039 ? ? 1.021 3.80 ? 550 92.90 ? 10 # _refine.entry_id 3HJ5 _refine.ls_d_res_high 3.100 _refine.ls_d_res_low 27.940 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 91.990 _refine.ls_number_reflns_obs 4729 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.237 _refine.ls_R_factor_R_work 0.230 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.299 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 9.700 _refine.ls_number_reflns_R_free 461 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 76.202 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.090 _refine.aniso_B[2][2] 0.100 _refine.aniso_B[3][3] 0.000 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.917 _refine.correlation_coeff_Fo_to_Fc_free 0.879 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.624 _refine.overall_SU_ML 0.458 _refine.overall_SU_B 25.943 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 93.01 _refine.B_iso_min 62.18 _refine.occupancy_max 1.00 _refine.occupancy_min 1.00 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1701 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1701 _refine_hist.d_res_high 3.100 _refine_hist.d_res_low 27.940 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1742 0.008 0.021 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2355 1.082 1.921 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 201 6.067 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 104 33.985 23.942 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 297 18.753 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 14 16.234 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 240 0.081 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1376 0.004 0.021 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1009 0.320 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1646 0.632 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 733 0.868 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 709 1.578 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 3.101 _refine_ls_shell.d_res_low 3.181 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 73.510 _refine_ls_shell.number_reflns_R_work 249 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.326 _refine_ls_shell.R_factor_R_free 0.364 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 34 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 283 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3HJ5 _struct.title 'Human prion protein variant V129 domain swapped dimer' _struct.pdbx_descriptor 'Major prion protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3HJ5 _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' _struct_keywords.text ;Prion protein, Cell membrane, Disease mutation, Disulfide bond, Glycoprotein, Golgi apparatus, GPI-anchor, Lipoprotein, Membrane, Polymorphism, Prion, MEMBRANE PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 54 ? MET A 65 ? SER A 143 MET A 154 1 ? 12 HELX_P HELX_P2 2 HIS A 66 ? TYR A 68 ? HIS A 155 TYR A 157 5 ? 3 HELX_P HELX_P3 3 ASN A 82 ? THR A 101 ? ASN A 171 THR A 190 1 ? 20 HELX_P HELX_P4 4 GLY A 106 ? PHE A 109 ? GLY A 195 PHE A 198 5 ? 4 HELX_P HELX_P5 5 THR A 110 ? ALA A 135 ? THR A 199 ALA A 224 1 ? 26 HELX_P HELX_P6 6 SER B 54 ? MET B 65 ? SER B 143 MET B 154 1 ? 12 HELX_P HELX_P7 7 HIS B 66 ? TYR B 68 ? HIS B 155 TYR B 157 5 ? 3 HELX_P HELX_P8 8 ASN B 82 ? THR B 99 ? ASN B 171 THR B 188 1 ? 18 HELX_P HELX_P9 9 LYS B 105 ? PHE B 109 ? LYS B 194 PHE B 198 1 ? 5 HELX_P HELX_P10 10 THR B 110 ? TYR B 137 ? THR B 199 TYR B 226 1 ? 28 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 90 SG ? ? ? 1_555 B CYS 125 SG ? ? A CYS 179 B CYS 214 1_555 ? ? ? ? ? ? ? 2.040 ? disulf2 disulf ? ? A CYS 125 SG ? ? ? 1_555 B CYS 90 SG ? ? A CYS 214 B CYS 179 1_555 ? ? ? ? ? ? ? 2.049 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 40 ? LEU A 41 ? VAL A 129 LEU A 130 A 2 TYR A 73 ? TYR A 74 ? TYR A 162 TYR A 163 B 1 THR A 102 ? THR A 104 ? THR A 191 THR A 193 B 2 THR B 102 ? THR B 104 ? THR B 191 THR B 193 C 1 VAL B 40 ? LEU B 41 ? VAL B 129 LEU B 130 C 2 TYR B 73 ? TYR B 74 ? TYR B 162 TYR B 163 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 40 ? N VAL A 129 O TYR A 74 ? O TYR A 163 B 1 2 N THR A 103 ? N THR A 192 O THR B 103 ? O THR B 192 C 1 2 N VAL B 40 ? N VAL B 129 O TYR B 74 ? O TYR B 163 # _atom_sites.entry_id 3HJ5 _atom_sites.fract_transf_matrix[1][1] 0.034894 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013886 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007943 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 90 ? ? ? A . n A 1 2 GLN 2 91 ? ? ? A . n A 1 3 GLY 3 92 ? ? ? A . n A 1 4 GLY 4 93 ? ? ? A . n A 1 5 GLY 5 94 ? ? ? A . n A 1 6 THR 6 95 ? ? ? A . n A 1 7 HIS 7 96 ? ? ? A . n A 1 8 SER 8 97 ? ? ? A . n A 1 9 GLN 9 98 ? ? ? A . n A 1 10 TRP 10 99 ? ? ? A . n A 1 11 ASN 11 100 ? ? ? A . n A 1 12 LYS 12 101 ? ? ? A . n A 1 13 PRO 13 102 ? ? ? A . n A 1 14 SER 14 103 ? ? ? A . n A 1 15 LYS 15 104 ? ? ? A . n A 1 16 PRO 16 105 ? ? ? A . n A 1 17 LYS 17 106 ? ? ? A . n A 1 18 THR 18 107 ? ? ? A . n A 1 19 ASN 19 108 ? ? ? A . n A 1 20 MET 20 109 ? ? ? A . n A 1 21 LYS 21 110 ? ? ? A . n A 1 22 HIS 22 111 ? ? ? A . n A 1 23 MET 23 112 ? ? ? A . n A 1 24 ALA 24 113 ? ? ? A . n A 1 25 GLY 25 114 ? ? ? A . n A 1 26 ALA 26 115 ? ? ? A . n A 1 27 ALA 27 116 ? ? ? A . n A 1 28 ALA 28 117 ? ? ? A . n A 1 29 ALA 29 118 ? ? ? A . n A 1 30 GLY 30 119 ? ? ? A . n A 1 31 ALA 31 120 ? ? ? A . n A 1 32 VAL 32 121 ? ? ? A . n A 1 33 VAL 33 122 ? ? ? A . n A 1 34 GLY 34 123 ? ? ? A . n A 1 35 GLY 35 124 ? ? ? A . n A 1 36 LEU 36 125 125 LEU LEU A . n A 1 37 GLY 37 126 126 GLY GLY A . n A 1 38 GLY 38 127 127 GLY GLY A . n A 1 39 TYR 39 128 128 TYR TYR A . n A 1 40 VAL 40 129 129 VAL VAL A . n A 1 41 LEU 41 130 130 LEU LEU A . n A 1 42 GLY 42 131 131 GLY GLY A . n A 1 43 SER 43 132 132 SER SER A . n A 1 44 ALA 44 133 133 ALA ALA A . n A 1 45 MET 45 134 134 MET MET A . n A 1 46 SER 46 135 135 SER SER A . n A 1 47 ARG 47 136 136 ARG ARG A . n A 1 48 PRO 48 137 137 PRO PRO A . n A 1 49 ILE 49 138 138 ILE ILE A . n A 1 50 ILE 50 139 139 ILE ILE A . n A 1 51 HIS 51 140 140 HIS HIS A . n A 1 52 PHE 52 141 141 PHE PHE A . n A 1 53 GLY 53 142 142 GLY GLY A . n A 1 54 SER 54 143 143 SER SER A . n A 1 55 ASP 55 144 144 ASP ASP A . n A 1 56 TYR 56 145 145 TYR TYR A . n A 1 57 GLU 57 146 146 GLU GLU A . n A 1 58 ASP 58 147 147 ASP ASP A . n A 1 59 ARG 59 148 148 ARG ARG A . n A 1 60 TYR 60 149 149 TYR TYR A . n A 1 61 TYR 61 150 150 TYR TYR A . n A 1 62 ARG 62 151 151 ARG ARG A . n A 1 63 GLU 63 152 152 GLU GLU A . n A 1 64 ASN 64 153 153 ASN ASN A . n A 1 65 MET 65 154 154 MET MET A . n A 1 66 HIS 66 155 155 HIS HIS A . n A 1 67 ARG 67 156 156 ARG ARG A . n A 1 68 TYR 68 157 157 TYR TYR A . n A 1 69 PRO 69 158 158 PRO PRO A . n A 1 70 ASN 70 159 159 ASN ASN A . n A 1 71 GLN 71 160 160 GLN GLN A . n A 1 72 VAL 72 161 161 VAL VAL A . n A 1 73 TYR 73 162 162 TYR TYR A . n A 1 74 TYR 74 163 163 TYR TYR A . n A 1 75 ARG 75 164 164 ARG ARG A . n A 1 76 PRO 76 165 165 PRO PRO A . n A 1 77 MET 77 166 166 MET MET A . n A 1 78 ASP 78 167 167 ASP ASP A . n A 1 79 GLU 79 168 168 GLU GLU A . n A 1 80 TYR 80 169 169 TYR TYR A . n A 1 81 SER 81 170 170 SER SER A . n A 1 82 ASN 82 171 171 ASN ASN A . n A 1 83 GLN 83 172 172 GLN GLN A . n A 1 84 ASN 84 173 173 ASN ASN A . n A 1 85 ASN 85 174 174 ASN ASN A . n A 1 86 PHE 86 175 175 PHE PHE A . n A 1 87 VAL 87 176 176 VAL VAL A . n A 1 88 HIS 88 177 177 HIS HIS A . n A 1 89 ASP 89 178 178 ASP ASP A . n A 1 90 CYS 90 179 179 CYS CYS A . n A 1 91 VAL 91 180 180 VAL VAL A . n A 1 92 ASN 92 181 181 ASN ASN A . n A 1 93 ILE 93 182 182 ILE ILE A . n A 1 94 THR 94 183 183 THR THR A . n A 1 95 ILE 95 184 184 ILE ILE A . n A 1 96 LYS 96 185 185 LYS LYS A . n A 1 97 GLN 97 186 186 GLN GLN A . n A 1 98 HIS 98 187 187 HIS HIS A . n A 1 99 THR 99 188 188 THR THR A . n A 1 100 VAL 100 189 189 VAL VAL A . n A 1 101 THR 101 190 190 THR THR A . n A 1 102 THR 102 191 191 THR THR A . n A 1 103 THR 103 192 192 THR THR A . n A 1 104 THR 104 193 193 THR THR A . n A 1 105 LYS 105 194 194 LYS LYS A . n A 1 106 GLY 106 195 195 GLY GLY A . n A 1 107 GLU 107 196 196 GLU GLU A . n A 1 108 ASN 108 197 197 ASN ASN A . n A 1 109 PHE 109 198 198 PHE PHE A . n A 1 110 THR 110 199 199 THR THR A . n A 1 111 GLU 111 200 200 GLU GLU A . n A 1 112 THR 112 201 201 THR THR A . n A 1 113 ASP 113 202 202 ASP ASP A . n A 1 114 VAL 114 203 203 VAL VAL A . n A 1 115 LYS 115 204 204 LYS LYS A . n A 1 116 MET 116 205 205 MET MET A . n A 1 117 MET 117 206 206 MET MET A . n A 1 118 GLU 118 207 207 GLU GLU A . n A 1 119 ARG 119 208 208 ARG ARG A . n A 1 120 VAL 120 209 209 VAL VAL A . n A 1 121 VAL 121 210 210 VAL VAL A . n A 1 122 GLU 122 211 211 GLU GLU A . n A 1 123 GLN 123 212 212 GLN GLN A . n A 1 124 MET 124 213 213 MET MET A . n A 1 125 CYS 125 214 214 CYS CYS A . n A 1 126 ILE 126 215 215 ILE ILE A . n A 1 127 THR 127 216 216 THR THR A . n A 1 128 GLN 128 217 217 GLN GLN A . n A 1 129 TYR 129 218 218 TYR TYR A . n A 1 130 GLU 130 219 219 GLU GLU A . n A 1 131 ARG 131 220 220 ARG ARG A . n A 1 132 GLU 132 221 221 GLU GLU A . n A 1 133 SER 133 222 222 SER SER A . n A 1 134 GLN 134 223 223 GLN GLN A . n A 1 135 ALA 135 224 224 ALA ALA A . n A 1 136 TYR 136 225 225 TYR TYR A . n A 1 137 TYR 137 226 ? ? ? A . n A 1 138 GLN 138 227 ? ? ? A . n A 1 139 ARG 139 228 ? ? ? A . n A 1 140 GLY 140 229 ? ? ? A . n A 1 141 SER 141 230 ? ? ? A . n A 1 142 SER 142 231 ? ? ? A . n B 1 1 GLY 1 90 ? ? ? B . n B 1 2 GLN 2 91 ? ? ? B . n B 1 3 GLY 3 92 ? ? ? B . n B 1 4 GLY 4 93 ? ? ? B . n B 1 5 GLY 5 94 ? ? ? B . n B 1 6 THR 6 95 ? ? ? B . n B 1 7 HIS 7 96 ? ? ? B . n B 1 8 SER 8 97 ? ? ? B . n B 1 9 GLN 9 98 ? ? ? B . n B 1 10 TRP 10 99 ? ? ? B . n B 1 11 ASN 11 100 ? ? ? B . n B 1 12 LYS 12 101 ? ? ? B . n B 1 13 PRO 13 102 ? ? ? B . n B 1 14 SER 14 103 ? ? ? B . n B 1 15 LYS 15 104 ? ? ? B . n B 1 16 PRO 16 105 ? ? ? B . n B 1 17 LYS 17 106 ? ? ? B . n B 1 18 THR 18 107 ? ? ? B . n B 1 19 ASN 19 108 ? ? ? B . n B 1 20 MET 20 109 ? ? ? B . n B 1 21 LYS 21 110 ? ? ? B . n B 1 22 HIS 22 111 ? ? ? B . n B 1 23 MET 23 112 ? ? ? B . n B 1 24 ALA 24 113 ? ? ? B . n B 1 25 GLY 25 114 ? ? ? B . n B 1 26 ALA 26 115 ? ? ? B . n B 1 27 ALA 27 116 ? ? ? B . n B 1 28 ALA 28 117 ? ? ? B . n B 1 29 ALA 29 118 ? ? ? B . n B 1 30 GLY 30 119 ? ? ? B . n B 1 31 ALA 31 120 ? ? ? B . n B 1 32 VAL 32 121 ? ? ? B . n B 1 33 VAL 33 122 ? ? ? B . n B 1 34 GLY 34 123 ? ? ? B . n B 1 35 GLY 35 124 ? ? ? B . n B 1 36 LEU 36 125 ? ? ? B . n B 1 37 GLY 37 126 126 GLY GLY B . n B 1 38 GLY 38 127 127 GLY GLY B . n B 1 39 TYR 39 128 128 TYR TYR B . n B 1 40 VAL 40 129 129 VAL VAL B . n B 1 41 LEU 41 130 130 LEU LEU B . n B 1 42 GLY 42 131 131 GLY GLY B . n B 1 43 SER 43 132 132 SER SER B . n B 1 44 ALA 44 133 133 ALA ALA B . n B 1 45 MET 45 134 134 MET MET B . n B 1 46 SER 46 135 135 SER SER B . n B 1 47 ARG 47 136 136 ARG ARG B . n B 1 48 PRO 48 137 137 PRO PRO B . n B 1 49 ILE 49 138 138 ILE ILE B . n B 1 50 ILE 50 139 139 ILE ILE B . n B 1 51 HIS 51 140 140 HIS HIS B . n B 1 52 PHE 52 141 141 PHE PHE B . n B 1 53 GLY 53 142 142 GLY GLY B . n B 1 54 SER 54 143 143 SER SER B . n B 1 55 ASP 55 144 144 ASP ASP B . n B 1 56 TYR 56 145 145 TYR TYR B . n B 1 57 GLU 57 146 146 GLU GLU B . n B 1 58 ASP 58 147 147 ASP ASP B . n B 1 59 ARG 59 148 148 ARG ARG B . n B 1 60 TYR 60 149 149 TYR TYR B . n B 1 61 TYR 61 150 150 TYR TYR B . n B 1 62 ARG 62 151 151 ARG ARG B . n B 1 63 GLU 63 152 152 GLU GLU B . n B 1 64 ASN 64 153 153 ASN ASN B . n B 1 65 MET 65 154 154 MET MET B . n B 1 66 HIS 66 155 155 HIS HIS B . n B 1 67 ARG 67 156 156 ARG ARG B . n B 1 68 TYR 68 157 157 TYR TYR B . n B 1 69 PRO 69 158 158 PRO PRO B . n B 1 70 ASN 70 159 159 ASN ASN B . n B 1 71 GLN 71 160 160 GLN GLN B . n B 1 72 VAL 72 161 161 VAL VAL B . n B 1 73 TYR 73 162 162 TYR TYR B . n B 1 74 TYR 74 163 163 TYR TYR B . n B 1 75 ARG 75 164 164 ARG ARG B . n B 1 76 PRO 76 165 165 PRO PRO B . n B 1 77 MET 77 166 166 MET MET B . n B 1 78 ASP 78 167 167 ASP ASP B . n B 1 79 GLU 79 168 168 GLU GLU B . n B 1 80 TYR 80 169 169 TYR TYR B . n B 1 81 SER 81 170 170 SER SER B . n B 1 82 ASN 82 171 171 ASN ASN B . n B 1 83 GLN 83 172 172 GLN GLN B . n B 1 84 ASN 84 173 173 ASN ASN B . n B 1 85 ASN 85 174 174 ASN ASN B . n B 1 86 PHE 86 175 175 PHE PHE B . n B 1 87 VAL 87 176 176 VAL VAL B . n B 1 88 HIS 88 177 177 HIS HIS B . n B 1 89 ASP 89 178 178 ASP ASP B . n B 1 90 CYS 90 179 179 CYS CYS B . n B 1 91 VAL 91 180 180 VAL VAL B . n B 1 92 ASN 92 181 181 ASN ASN B . n B 1 93 ILE 93 182 182 ILE ILE B . n B 1 94 THR 94 183 183 THR THR B . n B 1 95 ILE 95 184 184 ILE ILE B . n B 1 96 LYS 96 185 185 LYS LYS B . n B 1 97 GLN 97 186 186 GLN GLN B . n B 1 98 HIS 98 187 187 HIS HIS B . n B 1 99 THR 99 188 188 THR THR B . n B 1 100 VAL 100 189 189 VAL VAL B . n B 1 101 THR 101 190 190 THR THR B . n B 1 102 THR 102 191 191 THR THR B . n B 1 103 THR 103 192 192 THR THR B . n B 1 104 THR 104 193 193 THR THR B . n B 1 105 LYS 105 194 194 LYS LYS B . n B 1 106 GLY 106 195 195 GLY GLY B . n B 1 107 GLU 107 196 196 GLU GLU B . n B 1 108 ASN 108 197 197 ASN ASN B . n B 1 109 PHE 109 198 198 PHE PHE B . n B 1 110 THR 110 199 199 THR THR B . n B 1 111 GLU 111 200 200 GLU GLU B . n B 1 112 THR 112 201 201 THR THR B . n B 1 113 ASP 113 202 202 ASP ASP B . n B 1 114 VAL 114 203 203 VAL VAL B . n B 1 115 LYS 115 204 204 LYS LYS B . n B 1 116 MET 116 205 205 MET MET B . n B 1 117 MET 117 206 206 MET MET B . n B 1 118 GLU 118 207 207 GLU GLU B . n B 1 119 ARG 119 208 208 ARG ARG B . n B 1 120 VAL 120 209 209 VAL VAL B . n B 1 121 VAL 121 210 210 VAL VAL B . n B 1 122 GLU 122 211 211 GLU GLU B . n B 1 123 GLN 123 212 212 GLN GLN B . n B 1 124 MET 124 213 213 MET MET B . n B 1 125 CYS 125 214 214 CYS CYS B . n B 1 126 ILE 126 215 215 ILE ILE B . n B 1 127 THR 127 216 216 THR THR B . n B 1 128 GLN 128 217 217 GLN GLN B . n B 1 129 TYR 129 218 218 TYR TYR B . n B 1 130 GLU 130 219 219 GLU GLU B . n B 1 131 ARG 131 220 220 ARG ARG B . n B 1 132 GLU 132 221 221 GLU GLU B . n B 1 133 SER 133 222 222 SER SER B . n B 1 134 GLN 134 223 223 GLN GLN B . n B 1 135 ALA 135 224 224 ALA ALA B . n B 1 136 TYR 136 225 225 TYR TYR B . n B 1 137 TYR 137 226 226 TYR TYR B . n B 1 138 GLN 138 227 227 GLN GLN B . n B 1 139 ARG 139 228 ? ? ? B . n B 1 140 GLY 140 229 ? ? ? B . n B 1 141 SER 141 230 ? ? ? B . n B 1 142 SER 142 231 ? ? ? B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6310 ? 1 MORE -64 ? 1 'SSA (A^2)' 11850 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-01-12 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.contact_author' 3 3 'Structure model' '_software.contact_author_email' 4 3 'Structure model' '_software.date' 5 3 'Structure model' '_software.language' 6 3 'Structure model' '_software.location' 7 3 'Structure model' '_software.name' 8 3 'Structure model' '_software.type' 9 3 'Structure model' '_software.version' # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 REFMAC 5.4.0067 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 HKL-2000 . ? ? ? ? 'data collection' ? ? ? 6 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 7 EPMR . ? ? ? ? phasing ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 167 ? ? -152.99 -159.34 2 1 GLN A 172 ? ? -28.80 -44.99 3 1 ASP A 178 ? ? -56.98 -74.73 4 1 THR A 192 ? ? -171.14 145.84 5 1 GLU B 168 ? ? -172.26 -54.26 6 1 THR B 188 ? ? -25.82 -49.31 7 1 THR B 192 ? ? -125.35 -149.99 8 1 TYR B 226 ? ? -116.25 74.31 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 90 ? A GLY 1 2 1 Y 1 A GLN 91 ? A GLN 2 3 1 Y 1 A GLY 92 ? A GLY 3 4 1 Y 1 A GLY 93 ? A GLY 4 5 1 Y 1 A GLY 94 ? A GLY 5 6 1 Y 1 A THR 95 ? A THR 6 7 1 Y 1 A HIS 96 ? A HIS 7 8 1 Y 1 A SER 97 ? A SER 8 9 1 Y 1 A GLN 98 ? A GLN 9 10 1 Y 1 A TRP 99 ? A TRP 10 11 1 Y 1 A ASN 100 ? A ASN 11 12 1 Y 1 A LYS 101 ? A LYS 12 13 1 Y 1 A PRO 102 ? A PRO 13 14 1 Y 1 A SER 103 ? A SER 14 15 1 Y 1 A LYS 104 ? A LYS 15 16 1 Y 1 A PRO 105 ? A PRO 16 17 1 Y 1 A LYS 106 ? A LYS 17 18 1 Y 1 A THR 107 ? A THR 18 19 1 Y 1 A ASN 108 ? A ASN 19 20 1 Y 1 A MET 109 ? A MET 20 21 1 Y 1 A LYS 110 ? A LYS 21 22 1 Y 1 A HIS 111 ? A HIS 22 23 1 Y 1 A MET 112 ? A MET 23 24 1 Y 1 A ALA 113 ? A ALA 24 25 1 Y 1 A GLY 114 ? A GLY 25 26 1 Y 1 A ALA 115 ? A ALA 26 27 1 Y 1 A ALA 116 ? A ALA 27 28 1 Y 1 A ALA 117 ? A ALA 28 29 1 Y 1 A ALA 118 ? A ALA 29 30 1 Y 1 A GLY 119 ? A GLY 30 31 1 Y 1 A ALA 120 ? A ALA 31 32 1 Y 1 A VAL 121 ? A VAL 32 33 1 Y 1 A VAL 122 ? A VAL 33 34 1 Y 1 A GLY 123 ? A GLY 34 35 1 Y 1 A GLY 124 ? A GLY 35 36 1 Y 1 A TYR 226 ? A TYR 137 37 1 Y 1 A GLN 227 ? A GLN 138 38 1 Y 1 A ARG 228 ? A ARG 139 39 1 Y 1 A GLY 229 ? A GLY 140 40 1 Y 1 A SER 230 ? A SER 141 41 1 Y 1 A SER 231 ? A SER 142 42 1 Y 1 B GLY 90 ? B GLY 1 43 1 Y 1 B GLN 91 ? B GLN 2 44 1 Y 1 B GLY 92 ? B GLY 3 45 1 Y 1 B GLY 93 ? B GLY 4 46 1 Y 1 B GLY 94 ? B GLY 5 47 1 Y 1 B THR 95 ? B THR 6 48 1 Y 1 B HIS 96 ? B HIS 7 49 1 Y 1 B SER 97 ? B SER 8 50 1 Y 1 B GLN 98 ? B GLN 9 51 1 Y 1 B TRP 99 ? B TRP 10 52 1 Y 1 B ASN 100 ? B ASN 11 53 1 Y 1 B LYS 101 ? B LYS 12 54 1 Y 1 B PRO 102 ? B PRO 13 55 1 Y 1 B SER 103 ? B SER 14 56 1 Y 1 B LYS 104 ? B LYS 15 57 1 Y 1 B PRO 105 ? B PRO 16 58 1 Y 1 B LYS 106 ? B LYS 17 59 1 Y 1 B THR 107 ? B THR 18 60 1 Y 1 B ASN 108 ? B ASN 19 61 1 Y 1 B MET 109 ? B MET 20 62 1 Y 1 B LYS 110 ? B LYS 21 63 1 Y 1 B HIS 111 ? B HIS 22 64 1 Y 1 B MET 112 ? B MET 23 65 1 Y 1 B ALA 113 ? B ALA 24 66 1 Y 1 B GLY 114 ? B GLY 25 67 1 Y 1 B ALA 115 ? B ALA 26 68 1 Y 1 B ALA 116 ? B ALA 27 69 1 Y 1 B ALA 117 ? B ALA 28 70 1 Y 1 B ALA 118 ? B ALA 29 71 1 Y 1 B GLY 119 ? B GLY 30 72 1 Y 1 B ALA 120 ? B ALA 31 73 1 Y 1 B VAL 121 ? B VAL 32 74 1 Y 1 B VAL 122 ? B VAL 33 75 1 Y 1 B GLY 123 ? B GLY 34 76 1 Y 1 B GLY 124 ? B GLY 35 77 1 Y 1 B LEU 125 ? B LEU 36 78 1 Y 1 B ARG 228 ? B ARG 139 79 1 Y 1 B GLY 229 ? B GLY 140 80 1 Y 1 B SER 230 ? B SER 141 81 1 Y 1 B SER 231 ? B SER 142 #