data_3HJD # _entry.id 3HJD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3HJD pdb_00003hjd 10.2210/pdb3hjd/pdb RCSB RCSB053204 ? ? WWPDB D_1000053204 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-10-13 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2011-09-07 4 'Structure model' 1 3 2018-01-24 5 'Structure model' 1 4 2023-09-06 6 'Structure model' 1 5 2024-11-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' 8 6 'Structure model' 'Derived calculations' 9 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation_author 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_initial_refinement_model 6 5 'Structure model' struct_conn 7 6 'Structure model' pdbx_entry_details 8 6 'Structure model' pdbx_modification_feature 9 6 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation_author.name' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' 4 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # _database_PDB_caveat.id 1 _database_PDB_caveat.text 'C-N BOND BETWEEN A CYS 19 AND A IML 20 IS OUTSIDE ACCEPTED RANGE' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3HJD _pdbx_database_status.recvd_initial_deposition_date 2009-05-21 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2pm1 'Derivative of human alpha-defensin 1 (HNP1)' unspecified PDB 2pm4 'Human alpha-defensin 1 (multiple Arg->Lys mutant)' unspecified PDB 2pm5 'Human alpha-defensin 1 derivative (HNP1)' unspecified PDB 1zmm 'Crystal structure of human alpha-defensin-4' unspecified PDB 1zmq 'Crystal structure of human alpha-defensin-6' unspecified PDB 1zmp 'Crystal structure of human defensin-5' unspecified PDB 3HJ2 'Crystal structure of covalent dimer of HNP1' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lubkowski, J.' 1 'Pazgier, M.' 2 'Lu, W.' 3 # _citation.id primary _citation.title 'What Dictates the Multifaced Functions of the Human alpha-Defensin HNP?' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wei, G.' 1 ? primary 'de Leeuw, E.' 2 ? primary 'Pazgier, M.' 3 ? primary 'Rajabi, M.' 4 ? primary 'Li, J.' 5 ? primary 'Zou, G.' 6 ? primary 'Ericksen, B.' 7 ? primary 'Wu, Z.' 8 ? primary 'Yuan, W.' 9 ? primary 'Szmacinski, H.' 10 ? primary 'Lu, W.-Y.' 11 ? primary 'Lubkowski, J.' 12 ? primary 'Lehrer, R.L.' 13 ? primary 'Lu, W.' 14 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Human neutrophil peptide 1' 3466.137 2 ? ILE84IML 'Residues 65-94' ? 2 water nat water 18.015 73 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Neutrophil defensin 1, HNP-1, HP-1, HP1, Defensin, alpha 1, HP 1-56, Neutrophil defensin 2, HNP-2, HP-2, HP2' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'ACYCRIPACIAGERRYGTC(IML)YQGRLWAFCC' _entity_poly.pdbx_seq_one_letter_code_can ACYCRIPACIAGERRYGTCIYQGRLWAFCC _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 CYS n 1 3 TYR n 1 4 CYS n 1 5 ARG n 1 6 ILE n 1 7 PRO n 1 8 ALA n 1 9 CYS n 1 10 ILE n 1 11 ALA n 1 12 GLY n 1 13 GLU n 1 14 ARG n 1 15 ARG n 1 16 TYR n 1 17 GLY n 1 18 THR n 1 19 CYS n 1 20 IML n 1 21 TYR n 1 22 GLN n 1 23 GLY n 1 24 ARG n 1 25 LEU n 1 26 TRP n 1 27 ALA n 1 28 PHE n 1 29 CYS n 1 30 CYS n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IML 'L-peptide linking' n N-METHYL-ISOLEUCINE ? 'C7 H15 N O2' 145.199 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 CYS 2 2 2 CYS CYS A . n A 1 3 TYR 3 3 3 TYR TYR A . n A 1 4 CYS 4 4 4 CYS CYS A . n A 1 5 ARG 5 5 5 ARG ARG A . n A 1 6 ILE 6 6 6 ILE ILE A . n A 1 7 PRO 7 7 7 PRO PRO A . n A 1 8 ALA 8 8 8 ALA ALA A . n A 1 9 CYS 9 9 9 CYS CYS A . n A 1 10 ILE 10 10 10 ILE ILE A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 GLU 13 13 13 GLU GLU A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 ARG 15 15 15 ARG ARG A . n A 1 16 TYR 16 16 16 TYR TYR A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 THR 18 18 18 THR THR A . n A 1 19 CYS 19 19 19 CYS CYS A . n A 1 20 IML 20 20 20 IML IML A . n A 1 21 TYR 21 21 21 TYR TYR A . n A 1 22 GLN 22 22 22 GLN GLN A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 TRP 26 26 26 TRP TRP A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 PHE 28 28 28 PHE PHE A . n A 1 29 CYS 29 29 29 CYS CYS A . n A 1 30 CYS 30 30 30 CYS CYS A . n B 1 1 ALA 1 1 1 ALA ALA B . n B 1 2 CYS 2 2 2 CYS CYS B . n B 1 3 TYR 3 3 3 TYR TYR B . n B 1 4 CYS 4 4 4 CYS CYS B . n B 1 5 ARG 5 5 5 ARG ARG B . n B 1 6 ILE 6 6 6 ILE ILE B . n B 1 7 PRO 7 7 7 PRO PRO B . n B 1 8 ALA 8 8 8 ALA ALA B . n B 1 9 CYS 9 9 9 CYS CYS B . n B 1 10 ILE 10 10 10 ILE ILE B . n B 1 11 ALA 11 11 11 ALA ALA B . n B 1 12 GLY 12 12 12 GLY GLY B . n B 1 13 GLU 13 13 13 GLU GLU B . n B 1 14 ARG 14 14 14 ARG ARG B . n B 1 15 ARG 15 15 15 ARG ARG B . n B 1 16 TYR 16 16 16 TYR TYR B . n B 1 17 GLY 17 17 17 GLY GLY B . n B 1 18 THR 18 18 18 THR THR B . n B 1 19 CYS 19 19 19 CYS CYS B . n B 1 20 IML 20 20 20 IML IML B . n B 1 21 TYR 21 21 21 TYR TYR B . n B 1 22 GLN 22 22 22 GLN GLN B . n B 1 23 GLY 23 23 23 GLY GLY B . n B 1 24 ARG 24 24 24 ARG ARG B . n B 1 25 LEU 25 25 25 LEU LEU B . n B 1 26 TRP 26 26 26 TRP TRP B . n B 1 27 ALA 27 27 27 ALA ALA B . n B 1 28 PHE 28 28 28 PHE PHE B . n B 1 29 CYS 29 29 29 CYS CYS B . n B 1 30 CYS 30 30 30 CYS CYS B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 203 203 HOH HOH A . C 2 HOH 2 204 204 HOH HOH A . C 2 HOH 3 206 206 HOH HOH A . C 2 HOH 4 211 211 HOH HOH A . C 2 HOH 5 213 213 HOH HOH A . C 2 HOH 6 216 216 HOH HOH A . C 2 HOH 7 218 218 HOH HOH A . C 2 HOH 8 219 219 HOH HOH A . C 2 HOH 9 224 224 HOH HOH A . C 2 HOH 10 226 226 HOH HOH A . C 2 HOH 11 229 229 HOH HOH A . C 2 HOH 12 231 231 HOH HOH A . C 2 HOH 13 232 232 HOH HOH A . C 2 HOH 14 233 233 HOH HOH A . C 2 HOH 15 235 235 HOH HOH A . C 2 HOH 16 236 236 HOH HOH A . C 2 HOH 17 237 237 HOH HOH A . C 2 HOH 18 239 239 HOH HOH A . C 2 HOH 19 242 242 HOH HOH A . C 2 HOH 20 243 243 HOH HOH A . C 2 HOH 21 244 244 HOH HOH A . C 2 HOH 22 245 245 HOH HOH A . C 2 HOH 23 249 249 HOH HOH A . C 2 HOH 24 251 251 HOH HOH A . C 2 HOH 25 252 252 HOH HOH A . C 2 HOH 26 254 254 HOH HOH A . C 2 HOH 27 255 255 HOH HOH A . C 2 HOH 28 261 261 HOH HOH A . C 2 HOH 29 262 262 HOH HOH A . C 2 HOH 30 263 263 HOH HOH A . C 2 HOH 31 267 267 HOH HOH A . C 2 HOH 32 269 269 HOH HOH A . C 2 HOH 33 272 272 HOH HOH A . C 2 HOH 34 273 273 HOH HOH A . D 2 HOH 1 201 201 HOH HOH B . D 2 HOH 2 202 202 HOH HOH B . D 2 HOH 3 205 205 HOH HOH B . D 2 HOH 4 207 207 HOH HOH B . D 2 HOH 5 208 208 HOH HOH B . D 2 HOH 6 209 209 HOH HOH B . D 2 HOH 7 210 210 HOH HOH B . D 2 HOH 8 212 212 HOH HOH B . D 2 HOH 9 214 214 HOH HOH B . D 2 HOH 10 215 215 HOH HOH B . D 2 HOH 11 217 217 HOH HOH B . D 2 HOH 12 220 220 HOH HOH B . D 2 HOH 13 221 221 HOH HOH B . D 2 HOH 14 222 222 HOH HOH B . D 2 HOH 15 223 223 HOH HOH B . D 2 HOH 16 225 225 HOH HOH B . D 2 HOH 17 227 227 HOH HOH B . D 2 HOH 18 228 228 HOH HOH B . D 2 HOH 19 230 230 HOH HOH B . D 2 HOH 20 234 234 HOH HOH B . D 2 HOH 21 238 238 HOH HOH B . D 2 HOH 22 240 240 HOH HOH B . D 2 HOH 23 241 241 HOH HOH B . D 2 HOH 24 246 246 HOH HOH B . D 2 HOH 25 247 247 HOH HOH B . D 2 HOH 26 248 248 HOH HOH B . D 2 HOH 27 250 250 HOH HOH B . D 2 HOH 28 253 253 HOH HOH B . D 2 HOH 29 256 256 HOH HOH B . D 2 HOH 30 257 257 HOH HOH B . D 2 HOH 31 258 258 HOH HOH B . D 2 HOH 32 259 259 HOH HOH B . D 2 HOH 33 260 260 HOH HOH B . D 2 HOH 34 264 264 HOH HOH B . D 2 HOH 35 265 265 HOH HOH B . D 2 HOH 36 266 266 HOH HOH B . D 2 HOH 37 268 268 HOH HOH B . D 2 HOH 38 270 270 HOH HOH B . D 2 HOH 39 271 271 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.4.0057 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _cell.entry_id 3HJD _cell.length_a 69.85 _cell.length_b 69.85 _cell.length_c 46.33 _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3HJD _symmetry.space_group_name_H-M 'P 6 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 177 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3HJD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.35 _exptl_crystal.density_percent_sol 47.73 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '0.1 M HEPES-Na (pH 7.5), 0.2 M sodium citrate, 30% (v/v) MPD, VAPOR DIFFUSION, HANGING DROP, temperature 293.0K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2007-08-10 _diffrn_detector.details 'Rosenbaum-Rock monochromator high-resolution double-crystal Si(220) sagittal focusing, Rosenbaum-Rock vertical focusing mirror' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ;Si 220. Rosenbaum-Rock double-crystal monochromator: liquid nitrogen cooled; sagitally focusing 2nd crystal, Rosenbaum-Rock vertical focusing mirror ; _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.000 # _reflns.entry_id 3HJD _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F -1.74 _reflns.d_resolution_low 27.89 _reflns.d_resolution_high 1.65 _reflns.number_obs 8402 _reflns.number_all 8402 _reflns.percent_possible_obs 99.4 _reflns.pdbx_Rmerge_I_obs 0.094 _reflns.pdbx_Rsym_value 0.094 _reflns.pdbx_netI_over_sigmaI 16.4 _reflns.B_iso_Wilson_estimate 28.2 _reflns.pdbx_redundancy 13.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.65 _reflns_shell.d_res_low 1.71 _reflns_shell.percent_possible_all 99.5 _reflns_shell.Rmerge_I_obs 0.476 _reflns_shell.pdbx_Rsym_value 0.476 _reflns_shell.meanI_over_sigI_obs 4.2 _reflns_shell.pdbx_redundancy 11.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 831 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3HJD _refine.ls_number_reflns_obs 8003 _refine.ls_number_reflns_all 8003 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 15.00 _refine.ls_d_res_high 1.65 _refine.ls_percent_reflns_obs 99.36 _refine.ls_R_factor_obs 0.17544 _refine.ls_R_factor_all 0.17544 _refine.ls_R_factor_R_work 0.17410 _refine.ls_R_factor_R_free 0.20313 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.7 _refine.ls_number_reflns_R_free 391 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.962 _refine.correlation_coeff_Fo_to_Fc_free 0.954 _refine.B_iso_mean 24.718 _refine.aniso_B[1][1] 1.23 _refine.aniso_B[2][2] 1.23 _refine.aniso_B[3][3] -1.85 _refine.aniso_B[1][2] 0.62 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 1DFN _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.091 _refine.pdbx_overall_ESU_R_Free 0.090 _refine.overall_SU_ML 0.055 _refine.overall_SU_B 3.276 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3HJD _refine_analyze.Luzzati_coordinate_error_obs 0.297 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs 15.0 _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 476 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 73 _refine_hist.number_atoms_total 549 _refine_hist.d_res_high 1.65 _refine_hist.d_res_low 15.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.019 0.022 ? 496 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.011 1.964 ? 666 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.705 5.000 ? 54 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 24.216 18.182 ? 22 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 12.772 15.000 ? 70 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 6.651 15.000 ? 8 'X-RAY DIFFRACTION' ? r_chiral_restr 0.163 0.200 ? 66 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.012 0.021 ? 370 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.380 1.500 ? 295 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.278 2.000 ? 460 'X-RAY DIFFRACTION' ? r_scbond_it 3.039 3.000 ? 201 'X-RAY DIFFRACTION' ? r_scangle_it 4.739 4.500 ? 206 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.650 _refine_ls_shell.d_res_low 1.692 _refine_ls_shell.number_reflns_R_work 554 _refine_ls_shell.R_factor_R_work 0.198 _refine_ls_shell.percent_reflns_obs 97.31 _refine_ls_shell.R_factor_R_free 0.278 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 25 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 579 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3HJD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3HJD _struct.title 'X-ray structure of monomeric variant of HNP1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3HJD _struct_keywords.pdbx_keywords 'ANTIMICROBIAL PROTEIN' _struct_keywords.text 'HNP1, monomeric defensin, antimicrobial, chemotactic, Antibiotic, Antiviral defense, Fungicide, ANTIMICROBIAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DEF1_HUMAN _struct_ref.pdbx_db_accession P59665 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ACYCRIPACIAGERRYGTCIYQGRLWAFCC _struct_ref.pdbx_align_begin 65 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3HJD A 1 ? 30 ? P59665 65 ? 94 ? 1 30 2 1 3HJD B 1 ? 30 ? P59665 65 ? 94 ? 1 30 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C 2 1 B,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ;Each of two monomers present in the asymmetric unit represents half of the biological assembly. Biologically-relevant dimers are not present in crystals of this derivative ; # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 2 SG ? ? ? 1_555 A CYS 30 SG ? ? A CYS 2 A CYS 30 1_555 ? ? ? ? ? ? ? 2.078 ? ? disulf2 disulf ? ? A CYS 4 SG ? ? ? 1_555 A CYS 19 SG ? ? A CYS 4 A CYS 19 1_555 ? ? ? ? ? ? ? 2.022 ? ? disulf3 disulf ? ? A CYS 9 SG ? ? ? 1_555 A CYS 29 SG ? ? A CYS 9 A CYS 29 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf4 disulf ? ? B CYS 2 SG ? ? ? 1_555 B CYS 30 SG ? ? B CYS 2 B CYS 30 1_555 ? ? ? ? ? ? ? 2.096 ? ? disulf5 disulf ? ? B CYS 4 SG ? ? ? 1_555 B CYS 19 SG ? ? B CYS 4 B CYS 19 1_555 ? ? ? ? ? ? ? 2.059 ? ? disulf6 disulf ? ? B CYS 9 SG ? ? ? 1_555 B CYS 29 SG ? ? B CYS 9 B CYS 29 1_555 ? ? ? ? ? ? ? 2.033 ? ? covale1 covale both ? A IML 20 C ? ? ? 1_555 A TYR 21 N ? ? A IML 20 A TYR 21 1_555 ? ? ? ? ? ? ? 1.397 ? ? covale2 covale both ? B CYS 19 C ? ? ? 1_555 B IML 20 N ? ? B CYS 19 B IML 20 1_555 ? ? ? ? ? ? ? 1.440 ? ? covale3 covale both ? B IML 20 C ? ? ? 1_555 B TYR 21 N ? ? B IML 20 B TYR 21 1_555 ? ? ? ? ? ? ? 1.477 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 IML A 20 ? . . . . IML A 20 ? 1_555 . . . . . . . ILE 1 IML Methylation 'Named protein modification' 2 IML B 20 ? . . . . IML B 20 ? 1_555 . . . . . . . ILE 1 IML Methylation 'Named protein modification' 3 CYS A 2 ? CYS A 30 ? CYS A 2 ? 1_555 CYS A 30 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS A 4 ? CYS A 19 ? CYS A 4 ? 1_555 CYS A 19 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS A 9 ? CYS A 29 ? CYS A 9 ? 1_555 CYS A 29 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS B 2 ? CYS B 30 ? CYS B 2 ? 1_555 CYS B 30 ? 1_555 SG SG . . . None 'Disulfide bridge' 7 CYS B 4 ? CYS B 19 ? CYS B 4 ? 1_555 CYS B 19 ? 1_555 SG SG . . . None 'Disulfide bridge' 8 CYS B 9 ? CYS B 29 ? CYS B 9 ? 1_555 CYS B 29 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ILE 6 A . ? ILE 6 A PRO 7 A ? PRO 7 A 1 5.21 2 ILE 6 B . ? ILE 6 B PRO 7 B ? PRO 7 B 1 13.25 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 3 ? ARG A 5 ? TYR A 3 ARG A 5 A 2 ARG A 24 ? CYS A 30 ? ARG A 24 CYS A 30 A 3 ARG A 14 ? TYR A 21 ? ARG A 14 TYR A 21 B 1 TYR B 3 ? ARG B 5 ? TYR B 3 ARG B 5 B 2 ARG B 24 ? CYS B 30 ? ARG B 24 CYS B 30 B 3 ARG B 14 ? TYR B 21 ? ARG B 14 TYR B 21 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 3 ? N TYR A 3 O CYS A 29 ? O CYS A 29 A 2 3 O CYS A 30 ? O CYS A 30 N ARG A 14 ? N ARG A 14 B 1 2 N ARG B 5 ? N ARG B 5 O ALA B 27 ? O ALA B 27 B 2 3 O CYS B 30 ? O CYS B 30 N ARG B 14 ? N ARG B 14 # _pdbx_entry_details.entry_id 3HJD _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C A CYS 19 ? ? N A IML 20 ? ? 1.641 1.336 0.305 0.023 Y 2 1 C B IML 20 ? ? N B TYR 21 ? ? 1.477 1.336 0.141 0.023 Y # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id IML _pdbx_validate_main_chain_plane.auth_asym_id A _pdbx_validate_main_chain_plane.auth_seq_id 20 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle 14.82 # _pdbx_validate_polymer_linkage.id 1 _pdbx_validate_polymer_linkage.PDB_model_num 1 _pdbx_validate_polymer_linkage.auth_atom_id_1 C _pdbx_validate_polymer_linkage.auth_asym_id_1 A _pdbx_validate_polymer_linkage.auth_comp_id_1 CYS _pdbx_validate_polymer_linkage.auth_seq_id_1 19 _pdbx_validate_polymer_linkage.PDB_ins_code_1 ? _pdbx_validate_polymer_linkage.label_alt_id_1 ? _pdbx_validate_polymer_linkage.auth_atom_id_2 N _pdbx_validate_polymer_linkage.auth_asym_id_2 A _pdbx_validate_polymer_linkage.auth_comp_id_2 IML _pdbx_validate_polymer_linkage.auth_seq_id_2 20 _pdbx_validate_polymer_linkage.PDB_ins_code_2 ? _pdbx_validate_polymer_linkage.label_alt_id_2 ? _pdbx_validate_polymer_linkage.dist 1.64 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A IML 20 A IML 20 ? ILE N-METHYL-ISOLEUCINE 2 B IML 20 B IML 20 ? ILE N-METHYL-ISOLEUCINE # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 231 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 23.0589 40.2598 31.7062 -0.0152 -0.0625 -0.0073 0.0003 -0.0162 -0.0086 6.2849 1.1021 3.1478 -0.2090 -0.8310 -0.1238 -0.0534 -0.0757 0.1124 0.0711 0.0439 0.0293 -0.0114 0.1364 0.0096 'X-RAY DIFFRACTION' 2 ? refined 7.7588 47.1363 34.3924 0.0079 -0.0263 -0.0301 -0.0054 -0.0140 -0.0042 1.5674 0.5533 2.8464 -0.5652 0.9617 -0.9472 -0.0194 -0.0419 -0.0382 -0.0206 0.0366 -0.0234 0.0045 0.0521 -0.0173 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 2 A 31 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 B 2 B 31 ? . . . . ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 CYS N N N N 41 CYS CA C N R 42 CYS C C N N 43 CYS O O N N 44 CYS CB C N N 45 CYS SG S N N 46 CYS OXT O N N 47 CYS H H N N 48 CYS H2 H N N 49 CYS HA H N N 50 CYS HB2 H N N 51 CYS HB3 H N N 52 CYS HG H N N 53 CYS HXT H N N 54 GLN N N N N 55 GLN CA C N S 56 GLN C C N N 57 GLN O O N N 58 GLN CB C N N 59 GLN CG C N N 60 GLN CD C N N 61 GLN OE1 O N N 62 GLN NE2 N N N 63 GLN OXT O N N 64 GLN H H N N 65 GLN H2 H N N 66 GLN HA H N N 67 GLN HB2 H N N 68 GLN HB3 H N N 69 GLN HG2 H N N 70 GLN HG3 H N N 71 GLN HE21 H N N 72 GLN HE22 H N N 73 GLN HXT H N N 74 GLU N N N N 75 GLU CA C N S 76 GLU C C N N 77 GLU O O N N 78 GLU CB C N N 79 GLU CG C N N 80 GLU CD C N N 81 GLU OE1 O N N 82 GLU OE2 O N N 83 GLU OXT O N N 84 GLU H H N N 85 GLU H2 H N N 86 GLU HA H N N 87 GLU HB2 H N N 88 GLU HB3 H N N 89 GLU HG2 H N N 90 GLU HG3 H N N 91 GLU HE2 H N N 92 GLU HXT H N N 93 GLY N N N N 94 GLY CA C N N 95 GLY C C N N 96 GLY O O N N 97 GLY OXT O N N 98 GLY H H N N 99 GLY H2 H N N 100 GLY HA2 H N N 101 GLY HA3 H N N 102 GLY HXT H N N 103 HOH O O N N 104 HOH H1 H N N 105 HOH H2 H N N 106 ILE N N N N 107 ILE CA C N S 108 ILE C C N N 109 ILE O O N N 110 ILE CB C N S 111 ILE CG1 C N N 112 ILE CG2 C N N 113 ILE CD1 C N N 114 ILE OXT O N N 115 ILE H H N N 116 ILE H2 H N N 117 ILE HA H N N 118 ILE HB H N N 119 ILE HG12 H N N 120 ILE HG13 H N N 121 ILE HG21 H N N 122 ILE HG22 H N N 123 ILE HG23 H N N 124 ILE HD11 H N N 125 ILE HD12 H N N 126 ILE HD13 H N N 127 ILE HXT H N N 128 IML N N N N 129 IML CA C N S 130 IML C C N N 131 IML O O N N 132 IML OXT O N N 133 IML CB C N S 134 IML CN C N N 135 IML CG2 C N N 136 IML CG1 C N N 137 IML CD1 C N N 138 IML H H N N 139 IML HA H N N 140 IML HXT H N N 141 IML HB H N N 142 IML HN1 H N N 143 IML HN2 H N N 144 IML HN3 H N N 145 IML HG21 H N N 146 IML HG22 H N N 147 IML HG23 H N N 148 IML HG12 H N N 149 IML HG13 H N N 150 IML HD11 H N N 151 IML HD12 H N N 152 IML HD13 H N N 153 LEU N N N N 154 LEU CA C N S 155 LEU C C N N 156 LEU O O N N 157 LEU CB C N N 158 LEU CG C N N 159 LEU CD1 C N N 160 LEU CD2 C N N 161 LEU OXT O N N 162 LEU H H N N 163 LEU H2 H N N 164 LEU HA H N N 165 LEU HB2 H N N 166 LEU HB3 H N N 167 LEU HG H N N 168 LEU HD11 H N N 169 LEU HD12 H N N 170 LEU HD13 H N N 171 LEU HD21 H N N 172 LEU HD22 H N N 173 LEU HD23 H N N 174 LEU HXT H N N 175 PHE N N N N 176 PHE CA C N S 177 PHE C C N N 178 PHE O O N N 179 PHE CB C N N 180 PHE CG C Y N 181 PHE CD1 C Y N 182 PHE CD2 C Y N 183 PHE CE1 C Y N 184 PHE CE2 C Y N 185 PHE CZ C Y N 186 PHE OXT O N N 187 PHE H H N N 188 PHE H2 H N N 189 PHE HA H N N 190 PHE HB2 H N N 191 PHE HB3 H N N 192 PHE HD1 H N N 193 PHE HD2 H N N 194 PHE HE1 H N N 195 PHE HE2 H N N 196 PHE HZ H N N 197 PHE HXT H N N 198 PRO N N N N 199 PRO CA C N S 200 PRO C C N N 201 PRO O O N N 202 PRO CB C N N 203 PRO CG C N N 204 PRO CD C N N 205 PRO OXT O N N 206 PRO H H N N 207 PRO HA H N N 208 PRO HB2 H N N 209 PRO HB3 H N N 210 PRO HG2 H N N 211 PRO HG3 H N N 212 PRO HD2 H N N 213 PRO HD3 H N N 214 PRO HXT H N N 215 THR N N N N 216 THR CA C N S 217 THR C C N N 218 THR O O N N 219 THR CB C N R 220 THR OG1 O N N 221 THR CG2 C N N 222 THR OXT O N N 223 THR H H N N 224 THR H2 H N N 225 THR HA H N N 226 THR HB H N N 227 THR HG1 H N N 228 THR HG21 H N N 229 THR HG22 H N N 230 THR HG23 H N N 231 THR HXT H N N 232 TRP N N N N 233 TRP CA C N S 234 TRP C C N N 235 TRP O O N N 236 TRP CB C N N 237 TRP CG C Y N 238 TRP CD1 C Y N 239 TRP CD2 C Y N 240 TRP NE1 N Y N 241 TRP CE2 C Y N 242 TRP CE3 C Y N 243 TRP CZ2 C Y N 244 TRP CZ3 C Y N 245 TRP CH2 C Y N 246 TRP OXT O N N 247 TRP H H N N 248 TRP H2 H N N 249 TRP HA H N N 250 TRP HB2 H N N 251 TRP HB3 H N N 252 TRP HD1 H N N 253 TRP HE1 H N N 254 TRP HE3 H N N 255 TRP HZ2 H N N 256 TRP HZ3 H N N 257 TRP HH2 H N N 258 TRP HXT H N N 259 TYR N N N N 260 TYR CA C N S 261 TYR C C N N 262 TYR O O N N 263 TYR CB C N N 264 TYR CG C Y N 265 TYR CD1 C Y N 266 TYR CD2 C Y N 267 TYR CE1 C Y N 268 TYR CE2 C Y N 269 TYR CZ C Y N 270 TYR OH O N N 271 TYR OXT O N N 272 TYR H H N N 273 TYR H2 H N N 274 TYR HA H N N 275 TYR HB2 H N N 276 TYR HB3 H N N 277 TYR HD1 H N N 278 TYR HD2 H N N 279 TYR HE1 H N N 280 TYR HE2 H N N 281 TYR HH H N N 282 TYR HXT H N N 283 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 CYS N CA sing N N 39 CYS N H sing N N 40 CYS N H2 sing N N 41 CYS CA C sing N N 42 CYS CA CB sing N N 43 CYS CA HA sing N N 44 CYS C O doub N N 45 CYS C OXT sing N N 46 CYS CB SG sing N N 47 CYS CB HB2 sing N N 48 CYS CB HB3 sing N N 49 CYS SG HG sing N N 50 CYS OXT HXT sing N N 51 GLN N CA sing N N 52 GLN N H sing N N 53 GLN N H2 sing N N 54 GLN CA C sing N N 55 GLN CA CB sing N N 56 GLN CA HA sing N N 57 GLN C O doub N N 58 GLN C OXT sing N N 59 GLN CB CG sing N N 60 GLN CB HB2 sing N N 61 GLN CB HB3 sing N N 62 GLN CG CD sing N N 63 GLN CG HG2 sing N N 64 GLN CG HG3 sing N N 65 GLN CD OE1 doub N N 66 GLN CD NE2 sing N N 67 GLN NE2 HE21 sing N N 68 GLN NE2 HE22 sing N N 69 GLN OXT HXT sing N N 70 GLU N CA sing N N 71 GLU N H sing N N 72 GLU N H2 sing N N 73 GLU CA C sing N N 74 GLU CA CB sing N N 75 GLU CA HA sing N N 76 GLU C O doub N N 77 GLU C OXT sing N N 78 GLU CB CG sing N N 79 GLU CB HB2 sing N N 80 GLU CB HB3 sing N N 81 GLU CG CD sing N N 82 GLU CG HG2 sing N N 83 GLU CG HG3 sing N N 84 GLU CD OE1 doub N N 85 GLU CD OE2 sing N N 86 GLU OE2 HE2 sing N N 87 GLU OXT HXT sing N N 88 GLY N CA sing N N 89 GLY N H sing N N 90 GLY N H2 sing N N 91 GLY CA C sing N N 92 GLY CA HA2 sing N N 93 GLY CA HA3 sing N N 94 GLY C O doub N N 95 GLY C OXT sing N N 96 GLY OXT HXT sing N N 97 HOH O H1 sing N N 98 HOH O H2 sing N N 99 ILE N CA sing N N 100 ILE N H sing N N 101 ILE N H2 sing N N 102 ILE CA C sing N N 103 ILE CA CB sing N N 104 ILE CA HA sing N N 105 ILE C O doub N N 106 ILE C OXT sing N N 107 ILE CB CG1 sing N N 108 ILE CB CG2 sing N N 109 ILE CB HB sing N N 110 ILE CG1 CD1 sing N N 111 ILE CG1 HG12 sing N N 112 ILE CG1 HG13 sing N N 113 ILE CG2 HG21 sing N N 114 ILE CG2 HG22 sing N N 115 ILE CG2 HG23 sing N N 116 ILE CD1 HD11 sing N N 117 ILE CD1 HD12 sing N N 118 ILE CD1 HD13 sing N N 119 ILE OXT HXT sing N N 120 IML N CA sing N N 121 IML N CN sing N N 122 IML N H sing N N 123 IML CA C sing N N 124 IML CA CB sing N N 125 IML CA HA sing N N 126 IML C O doub N N 127 IML C OXT sing N N 128 IML OXT HXT sing N N 129 IML CB CG2 sing N N 130 IML CB CG1 sing N N 131 IML CB HB sing N N 132 IML CN HN1 sing N N 133 IML CN HN2 sing N N 134 IML CN HN3 sing N N 135 IML CG2 HG21 sing N N 136 IML CG2 HG22 sing N N 137 IML CG2 HG23 sing N N 138 IML CG1 CD1 sing N N 139 IML CG1 HG12 sing N N 140 IML CG1 HG13 sing N N 141 IML CD1 HD11 sing N N 142 IML CD1 HD12 sing N N 143 IML CD1 HD13 sing N N 144 LEU N CA sing N N 145 LEU N H sing N N 146 LEU N H2 sing N N 147 LEU CA C sing N N 148 LEU CA CB sing N N 149 LEU CA HA sing N N 150 LEU C O doub N N 151 LEU C OXT sing N N 152 LEU CB CG sing N N 153 LEU CB HB2 sing N N 154 LEU CB HB3 sing N N 155 LEU CG CD1 sing N N 156 LEU CG CD2 sing N N 157 LEU CG HG sing N N 158 LEU CD1 HD11 sing N N 159 LEU CD1 HD12 sing N N 160 LEU CD1 HD13 sing N N 161 LEU CD2 HD21 sing N N 162 LEU CD2 HD22 sing N N 163 LEU CD2 HD23 sing N N 164 LEU OXT HXT sing N N 165 PHE N CA sing N N 166 PHE N H sing N N 167 PHE N H2 sing N N 168 PHE CA C sing N N 169 PHE CA CB sing N N 170 PHE CA HA sing N N 171 PHE C O doub N N 172 PHE C OXT sing N N 173 PHE CB CG sing N N 174 PHE CB HB2 sing N N 175 PHE CB HB3 sing N N 176 PHE CG CD1 doub Y N 177 PHE CG CD2 sing Y N 178 PHE CD1 CE1 sing Y N 179 PHE CD1 HD1 sing N N 180 PHE CD2 CE2 doub Y N 181 PHE CD2 HD2 sing N N 182 PHE CE1 CZ doub Y N 183 PHE CE1 HE1 sing N N 184 PHE CE2 CZ sing Y N 185 PHE CE2 HE2 sing N N 186 PHE CZ HZ sing N N 187 PHE OXT HXT sing N N 188 PRO N CA sing N N 189 PRO N CD sing N N 190 PRO N H sing N N 191 PRO CA C sing N N 192 PRO CA CB sing N N 193 PRO CA HA sing N N 194 PRO C O doub N N 195 PRO C OXT sing N N 196 PRO CB CG sing N N 197 PRO CB HB2 sing N N 198 PRO CB HB3 sing N N 199 PRO CG CD sing N N 200 PRO CG HG2 sing N N 201 PRO CG HG3 sing N N 202 PRO CD HD2 sing N N 203 PRO CD HD3 sing N N 204 PRO OXT HXT sing N N 205 THR N CA sing N N 206 THR N H sing N N 207 THR N H2 sing N N 208 THR CA C sing N N 209 THR CA CB sing N N 210 THR CA HA sing N N 211 THR C O doub N N 212 THR C OXT sing N N 213 THR CB OG1 sing N N 214 THR CB CG2 sing N N 215 THR CB HB sing N N 216 THR OG1 HG1 sing N N 217 THR CG2 HG21 sing N N 218 THR CG2 HG22 sing N N 219 THR CG2 HG23 sing N N 220 THR OXT HXT sing N N 221 TRP N CA sing N N 222 TRP N H sing N N 223 TRP N H2 sing N N 224 TRP CA C sing N N 225 TRP CA CB sing N N 226 TRP CA HA sing N N 227 TRP C O doub N N 228 TRP C OXT sing N N 229 TRP CB CG sing N N 230 TRP CB HB2 sing N N 231 TRP CB HB3 sing N N 232 TRP CG CD1 doub Y N 233 TRP CG CD2 sing Y N 234 TRP CD1 NE1 sing Y N 235 TRP CD1 HD1 sing N N 236 TRP CD2 CE2 doub Y N 237 TRP CD2 CE3 sing Y N 238 TRP NE1 CE2 sing Y N 239 TRP NE1 HE1 sing N N 240 TRP CE2 CZ2 sing Y N 241 TRP CE3 CZ3 doub Y N 242 TRP CE3 HE3 sing N N 243 TRP CZ2 CH2 doub Y N 244 TRP CZ2 HZ2 sing N N 245 TRP CZ3 CH2 sing Y N 246 TRP CZ3 HZ3 sing N N 247 TRP CH2 HH2 sing N N 248 TRP OXT HXT sing N N 249 TYR N CA sing N N 250 TYR N H sing N N 251 TYR N H2 sing N N 252 TYR CA C sing N N 253 TYR CA CB sing N N 254 TYR CA HA sing N N 255 TYR C O doub N N 256 TYR C OXT sing N N 257 TYR CB CG sing N N 258 TYR CB HB2 sing N N 259 TYR CB HB3 sing N N 260 TYR CG CD1 doub Y N 261 TYR CG CD2 sing Y N 262 TYR CD1 CE1 sing Y N 263 TYR CD1 HD1 sing N N 264 TYR CD2 CE2 doub Y N 265 TYR CD2 HD2 sing N N 266 TYR CE1 CZ doub Y N 267 TYR CE1 HE1 sing N N 268 TYR CE2 CZ sing Y N 269 TYR CE2 HE2 sing N N 270 TYR CZ OH sing N N 271 TYR OH HH sing N N 272 TYR OXT HXT sing N N 273 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1DFN _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 3HJD _atom_sites.fract_transf_matrix[1][1] 0.014317 _atom_sites.fract_transf_matrix[1][2] 0.008266 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016531 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021587 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_