HEADER TRANSFERASE 22-MAY-09 3HJZ TITLE THE STRUCTURE OF AN ALDOLASE FROM PROCHLOROCOCCUS MARINUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSALDOLASE B; COMPND 3 CHAIN: A; COMPND 4 EC: 2.2.1.2; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PROCHLOROCOCCUS MARINUS STR. MIT 9312; SOURCE 3 ORGANISM_TAXID: 74546; SOURCE 4 STRAIN: MIT 9132; SOURCE 5 GENE: PMT9312_0519, TAL, TRANSALDOSE B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) CODON PLUS RIPL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: P15TVLIC KEYWDS TRANSALDOLASE, PARACHLOROCOCCUS, MARINE, CYANOBACTERIA, FRUCTOSE-6- KEYWDS 2 PHOSPHATE ERYTHROSE-4-PHOSPHATE SEDOHEPTULOSE-7-PHOSPHATE KEYWDS 3 GLYCERALDEHYDE-3-PHOSPHATE, STRUCTURAL GENOMICS, PSI-2, PROTEIN KEYWDS 4 STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, KEYWDS 5 PENTOSE SHUNT, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.U.SINGER,X.XU,H.CUI,A.JOACHIMIAK,A.M.EDWARDS,A.SAVCHENKO,MIDWEST AUTHOR 2 CENTER FOR STRUCTURAL GENOMICS (MCSG) REVDAT 5 22-NOV-23 3HJZ 1 REMARK REVDAT 4 06-SEP-23 3HJZ 1 REMARK LINK REVDAT 3 23-MAY-12 3HJZ 1 JRNL REVDAT 2 24-AUG-11 3HJZ 1 JRNL VERSN REVDAT 1 09-JUN-09 3HJZ 0 JRNL AUTH L.R.THOMPSON,Q.ZENG,L.KELLY,K.H.HUANG,A.U.SINGER,J.STUBBE, JRNL AUTH 2 S.W.CHISHOLM JRNL TITL PHAGE AUXILIARY METABOLIC GENES AND THE REDIRECTION OF JRNL TITL 2 CYANOBACTERIAL HOST CARBON METABOLISM. JRNL REF PROC.NATL.ACAD.SCI.USA V. 108 E757 2011 JRNL REFN ISSN 0027-8424 JRNL PMID 21844365 JRNL DOI 10.1073/PNAS.1102164108 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.19 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 3 NUMBER OF REFLECTIONS : 26218 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.158 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1325 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1298 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 68.34 REMARK 3 BIN R VALUE (WORKING SET) : 0.1900 REMARK 3 BIN FREE R VALUE SET COUNT : 64 REMARK 3 BIN FREE R VALUE : 0.2700 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2615 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 45 REMARK 3 SOLVENT ATOMS : 341 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.01000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.152 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.140 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.084 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.726 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2793 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3761 ; 1.449 ; 1.992 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 363 ; 5.919 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 115 ;37.879 ;25.652 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 563 ;13.816 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;21.235 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 438 ; 0.102 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2003 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1495 ; 0.216 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1970 ; 0.301 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 281 ; 0.138 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 104 ; 0.284 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 37 ; 0.154 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1722 ; 0.761 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2805 ; 1.326 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1085 ; 2.485 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 947 ; 3.964 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3HJZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-MAY-09. REMARK 100 THE DEPOSITION ID IS D_1000053226. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-FEB-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54178 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26276 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 40.190 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.2500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 71.1 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 0.37200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PRODUCED BY INPUTING THE PROTEIN SEQUENCE INTO REMARK 200 SWISS-MODEL. MODEL BASED ON THE STRUCTURE OF 1F05 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES 7.5, 20% PEG 10K AND 1/20 REMARK 280 TEV. 10% ETHYLENE GLYCOL, THEN PARATONE-N OIL USED AS REMARK 280 CRYOPROTECTANT , VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 294K, REMARK 280 PH 7.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.37750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.93300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.18800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.93300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.37750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.18800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 333 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LEU A 290 N CA C O CB CG CD1 REMARK 480 LEU A 290 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 564 O HOH A 594 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 101 115.63 -36.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 342 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MSE A 11 O REMARK 620 2 HOH A 456 O 135.0 REMARK 620 3 HOH A 616 O 111.8 112.7 REMARK 620 4 HOH A 677 O 86.5 90.0 102.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 341 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 78 OD1 REMARK 620 2 HOH A 570 O 84.5 REMARK 620 3 HOH A 676 O 117.7 112.5 REMARK 620 4 HOH A 689 O 139.2 120.2 84.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 340 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 99 OE2 REMARK 620 2 PHE A 306 O 103.2 REMARK 620 3 HOH A 685 O 110.4 145.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 343 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 101 OD2 REMARK 620 2 HOH A 519 O 112.1 REMARK 620 3 HOH A 619 O 97.8 85.2 REMARK 620 4 HOH A 681 O 128.4 104.5 120.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 334 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 335 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 336 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 337 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 338 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 339 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 340 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 341 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 342 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 343 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 344 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 345 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 346 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 347 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 348 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 349 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 350 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC40074 RELATED DB: TARGETDB DBREF 3HJZ A 1 333 UNP Q31C15 TAL_PROM9 1 333 SEQADV 3HJZ GLY A 0 UNP Q31C15 EXPRESSION TAG SEQRES 1 A 334 GLY MSE LYS SER ILE LEU GLU GLN LEU SER SER MSE THR SEQRES 2 A 334 VAL VAL VAL ALA ASP THR GLY ASP LEU ASP SER ILE LYS SEQRES 3 A 334 LYS PHE GLN PRO ARG ASP ALA THR THR ASN PRO SER LEU SEQRES 4 A 334 ILE LEU ALA ALA ALA LYS ASN PRO ASP TYR VAL LYS LEU SEQRES 5 A 334 ILE ASP LYS ALA ILE GLU SER SER GLU ASN THR LEU PRO SEQRES 6 A 334 ASN GLY PHE SER GLU ILE GLU LEU ILE LYS GLU THR VAL SEQRES 7 A 334 ASP GLN VAL SER VAL PHE PHE GLY LYS GLU ILE LEU LYS SEQRES 8 A 334 ILE ILE SER GLY ARG VAL SER THR GLU VAL ASP ALA ARG SEQRES 9 A 334 LEU SER PHE ASP THR GLU ALA THR VAL LYS LYS ALA ARG SEQRES 10 A 334 LYS LEU ILE ASN LEU TYR LYS ASN PHE GLY ILE GLU LYS SEQRES 11 A 334 GLU ARG ILE LEU ILE LYS ILE ALA ALA THR TRP GLU GLY SEQRES 12 A 334 ILE LYS ALA ALA GLU ILE LEU GLU LYS GLU GLY ILE LYS SEQRES 13 A 334 CYS ASN LEU THR LEU LEU PHE ASN PHE CYS GLN ALA VAL SEQRES 14 A 334 THR CYS ALA ASN ALA ASN ILE THR LEU ILE SER PRO PHE SEQRES 15 A 334 VAL GLY ARG ILE LEU ASP TRP HIS LYS ALA LYS THR GLY SEQRES 16 A 334 LYS THR SER PHE ILE GLY ALA GLU ASP PRO GLY VAL ILE SEQRES 17 A 334 SER VAL THR GLN ILE TYR LYS TYR PHE LYS GLU LYS GLY SEQRES 18 A 334 PHE LYS THR GLU VAL MSE GLY ALA SER PHE ARG ASN LEU SEQRES 19 A 334 ASP GLU ILE LYS GLU LEU ALA GLY CYS ASP LEU LEU THR SEQRES 20 A 334 ILE ALA PRO LYS PHE LEU GLU GLU LEU LYS ARG GLU LYS SEQRES 21 A 334 GLY VAL LEU ILE ARG LYS LEU ASP ALA SER THR LYS ILE SEQRES 22 A 334 ASN ASN SER ILE ASP TYR LYS PHE GLU GLU LYS ASP PHE SEQRES 23 A 334 ARG LEU SER MSE LEU GLU ASP GLN MSE ALA SER GLU LYS SEQRES 24 A 334 LEU SER GLU GLY ILE THR GLY PHE SER LYS ALA ILE GLU SEQRES 25 A 334 GLU LEU GLU GLU LEU LEU ILE GLU ARG LEU SER GLU MSE SEQRES 26 A 334 LYS ASN HIS LYS LEU ILE SER ALA ASN MODRES 3HJZ MSE A 1 MET SELENOMETHIONINE MODRES 3HJZ MSE A 11 MET SELENOMETHIONINE MODRES 3HJZ MSE A 226 MET SELENOMETHIONINE MODRES 3HJZ MSE A 289 MET SELENOMETHIONINE MODRES 3HJZ MSE A 294 MET SELENOMETHIONINE MODRES 3HJZ MSE A 324 MET SELENOMETHIONINE HET MSE A 1 16 HET MSE A 11 8 HET MSE A 226 8 HET MSE A 289 8 HET MSE A 294 8 HET MSE A 324 8 HET EDO A 334 4 HET EDO A 335 4 HET EDO A 336 4 HET EDO A 337 4 HET EDO A 338 4 HET EDO A 339 4 HET NA A 340 1 HET NA A 341 1 HET NA A 342 1 HET NA A 343 1 HET CL A 344 1 HET CL A 345 1 HET CL A 346 1 HET NA A 347 1 HET NA A 348 1 HET SO4 A 349 5 HET PEG A 350 7 HETNAM MSE SELENOMETHIONINE HETNAM EDO 1,2-ETHANEDIOL HETNAM NA SODIUM ION HETNAM CL CHLORIDE ION HETNAM SO4 SULFATE ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 2 EDO 6(C2 H6 O2) FORMUL 8 NA 6(NA 1+) FORMUL 12 CL 3(CL 1-) FORMUL 17 SO4 O4 S 2- FORMUL 18 PEG C4 H10 O3 FORMUL 19 HOH *341(H2 O) HELIX 1 1 SER A 3 SER A 10 1 8 HELIX 2 2 ASP A 20 GLN A 28 1 9 HELIX 3 3 ASN A 35 ALA A 43 1 9 HELIX 4 4 TYR A 48 LEU A 63 1 16 HELIX 5 5 SER A 68 LYS A 90 1 23 HELIX 6 6 ASP A 101 SER A 105 5 5 HELIX 7 7 ASP A 107 PHE A 125 1 19 HELIX 8 8 GLU A 128 GLU A 130 5 3 HELIX 9 9 THR A 139 GLU A 152 1 14 HELIX 10 10 ASN A 163 ALA A 173 1 11 HELIX 11 11 PHE A 181 GLY A 194 1 14 HELIX 12 12 ILE A 199 GLU A 202 5 4 HELIX 13 13 ASP A 203 GLY A 220 1 18 HELIX 14 14 ASN A 232 LEU A 239 1 8 HELIX 15 15 ALA A 248 GLU A 258 1 11 HELIX 16 16 GLU A 281 ASP A 292 1 12 HELIX 17 17 ASP A 292 SER A 331 1 40 SHEET 1 A 8 VAL A 13 ALA A 16 0 SHEET 2 A 8 LEU A 244 ILE A 247 1 O ILE A 247 N VAL A 15 SHEET 3 A 8 GLU A 224 GLY A 227 1 N GLY A 227 O THR A 246 SHEET 4 A 8 LEU A 177 ILE A 178 1 N ILE A 178 O MSE A 226 SHEET 5 A 8 CYS A 156 THR A 159 1 N LEU A 158 O LEU A 177 SHEET 6 A 8 ILE A 132 ALA A 137 1 N ILE A 136 O THR A 159 SHEET 7 A 8 VAL A 96 GLU A 99 1 N THR A 98 O LEU A 133 SHEET 8 A 8 ALA A 32 THR A 34 1 N ALA A 32 O SER A 97 LINK C GLY A 0 N AMSE A 1 1555 1555 1.35 LINK C GLY A 0 N BMSE A 1 1555 1555 1.33 LINK C AMSE A 1 N LYS A 2 1555 1555 1.33 LINK C BMSE A 1 N LYS A 2 1555 1555 1.34 LINK C SER A 10 N MSE A 11 1555 1555 1.34 LINK C MSE A 11 N THR A 12 1555 1555 1.33 LINK C VAL A 225 N MSE A 226 1555 1555 1.34 LINK C MSE A 226 N GLY A 227 1555 1555 1.34 LINK C SER A 288 N MSE A 289 1555 1555 1.33 LINK C MSE A 289 N ALEU A 290 1555 1555 1.33 LINK C MSE A 289 N BLEU A 290 1555 1555 1.34 LINK C GLN A 293 N MSE A 294 1555 1555 1.33 LINK C MSE A 294 N ALA A 295 1555 1555 1.34 LINK C GLU A 323 N MSE A 324 1555 1555 1.34 LINK C MSE A 324 N LYS A 325 1555 1555 1.33 LINK O MSE A 11 NA NA A 342 1555 1555 2.58 LINK OD1 ASP A 78 NA NA A 341 1555 1555 2.73 LINK OE2 GLU A 99 NA NA A 340 1555 1555 2.46 LINK OD2 ASP A 101 NA NA A 343 1555 1555 2.67 LINK OE1 GLU A 238 NA NA A 347 1555 1555 3.14 LINK O PHE A 306 NA NA A 340 1555 1555 2.95 LINK NA NA A 340 O HOH A 685 1555 1555 2.58 LINK NA NA A 341 O HOH A 570 1555 1555 2.75 LINK NA NA A 341 O HOH A 676 1555 1555 2.43 LINK NA NA A 341 O HOH A 689 1555 1555 2.75 LINK NA NA A 342 O HOH A 456 1555 1555 2.50 LINK NA NA A 342 O HOH A 616 1555 1555 2.72 LINK NA NA A 342 O HOH A 677 1555 1555 2.73 LINK NA NA A 343 O HOH A 519 1555 1555 2.65 LINK NA NA A 343 O HOH A 619 1555 1555 3.17 LINK NA NA A 343 O HOH A 681 1555 1555 2.43 CISPEP 1 GLY A 0 MSE A 1 0 -0.97 CISPEP 2 GLY A 0 MSE A 1 0 0.14 SITE 1 AC1 7 ASN A 124 LYS A 237 GLU A 258 LYS A 259 SITE 2 AC1 7 HOH A 382 HOH A 406 HOH A 598 SITE 1 AC2 8 ILE A 185 HIS A 189 PRO A 204 SER A 208 SITE 2 AC2 8 ILE A 276 MSE A 294 PEG A 350 HOH A 629 SITE 1 AC3 7 ASN A 35 GLU A 99 LYS A 135 THR A 159 SITE 2 AC3 7 PHE A 181 PHE A 306 HOH A 621 SITE 1 AC4 4 ALA A 191 LYS A 192 PEG A 350 HOH A 602 SITE 1 AC5 3 LEU A 5 GLU A 6 SER A 9 SITE 1 AC6 7 LYS A 195 SER A 197 PHE A 198 ILE A 199 SITE 2 AC6 7 GLU A 202 ASP A 284 HOH A 648 SITE 1 AC7 5 PRO A 36 GLU A 99 PHE A 306 ALA A 309 SITE 2 AC7 5 HOH A 685 SITE 1 AC8 5 VAL A 77 ASP A 78 HOH A 570 HOH A 676 SITE 2 AC8 5 HOH A 689 SITE 1 AC9 7 MSE A 11 GLY A 241 CYS A 242 ARG A 264 SITE 2 AC9 7 HOH A 456 HOH A 616 HOH A 677 SITE 1 BC1 4 ASP A 101 ARG A 103 HOH A 519 HOH A 681 SITE 1 BC2 4 THR A 139 TRP A 140 PHE A 285 HOH A 529 SITE 1 BC3 1 HIS A 327 SITE 1 BC4 5 LYS A 190 LYS A 271 ILE A 272 HOH A 432 SITE 2 BC4 5 HOH A 603 SITE 1 BC5 4 LYS A 86 PHE A 125 GLU A 238 LYS A 265 SITE 1 BC6 2 LEU A 63 PRO A 64 SITE 1 BC7 8 ASP A 20 LEU A 21 ASP A 22 ALA A 41 SITE 2 BC7 8 ALA A 42 ASN A 45 TYR A 48 HOH A 480 SITE 1 BC8 10 LYS A 192 ILE A 207 SER A 208 GLN A 211 SITE 2 BC8 10 ASN A 274 ILE A 276 EDO A 335 EDO A 337 SITE 3 BC8 10 HOH A 411 HOH A 659 CRYST1 42.755 80.376 97.866 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023389 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012442 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010218 0.00000