data_3HKL # _entry.id 3HKL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3HKL RCSB RCSB053248 WWPDB D_1000053248 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3HKL _pdbx_database_status.recvd_initial_deposition_date 2009-05-24 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Stiegler, A.L.' 1 'Hubbard, S.R.' 2 # _citation.id primary _citation.title 'Crystal structure of the frizzled-like cysteine-rich domain of the receptor tyrosine kinase MuSK.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 393 _citation.page_first 1 _citation.page_last 9 _citation.year 2009 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19664639 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2009.07.091 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Stiegler, A.L.' 1 ? primary 'Burden, S.J.' 2 ? primary 'Hubbard, S.R.' 3 ? # _cell.entry_id 3HKL _cell.length_a 65.592 _cell.length_b 44.422 _cell.length_c 69.530 _cell.angle_alpha 90.00 _cell.angle_beta 108.27 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3HKL _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Muscle, skeletal receptor tyrosine protein kinase' 21888.062 2 2.7.10.1 ? 'FZ-CRD, residues 313-494' ? 2 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 2 ? ? ? ? 3 water nat water 18.015 63 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Muscle-specific kinase receptor, MuSK' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ADLGSHHHHHHGPRGSKGYCAQYRGEVCDAVLVKDSLVFFNTSYPDPEEAQELLIHTAWNELKAVSPLCRPAAEALLCNH LFQECSPGVLPTPMPICREYCLAVKELFCAKEWLAMEGKTHRGLYRSGMHFLPVPECSKLPSMHQDPTACTRLPYLDYKK ENITTFPSITSSKPSVDIPNLPASTSSFAVSPAYSMT ; _entity_poly.pdbx_seq_one_letter_code_can ;ADLGSHHHHHHGPRGSKGYCAQYRGEVCDAVLVKDSLVFFNTSYPDPEEAQELLIHTAWNELKAVSPLCRPAAEALLCNH LFQECSPGVLPTPMPICREYCLAVKELFCAKEWLAMEGKTHRGLYRSGMHFLPVPECSKLPSMHQDPTACTRLPYLDYKK ENITTFPSITSSKPSVDIPNLPASTSSFAVSPAYSMT ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ASP n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 HIS n 1 12 GLY n 1 13 PRO n 1 14 ARG n 1 15 GLY n 1 16 SER n 1 17 LYS n 1 18 GLY n 1 19 TYR n 1 20 CYS n 1 21 ALA n 1 22 GLN n 1 23 TYR n 1 24 ARG n 1 25 GLY n 1 26 GLU n 1 27 VAL n 1 28 CYS n 1 29 ASP n 1 30 ALA n 1 31 VAL n 1 32 LEU n 1 33 VAL n 1 34 LYS n 1 35 ASP n 1 36 SER n 1 37 LEU n 1 38 VAL n 1 39 PHE n 1 40 PHE n 1 41 ASN n 1 42 THR n 1 43 SER n 1 44 TYR n 1 45 PRO n 1 46 ASP n 1 47 PRO n 1 48 GLU n 1 49 GLU n 1 50 ALA n 1 51 GLN n 1 52 GLU n 1 53 LEU n 1 54 LEU n 1 55 ILE n 1 56 HIS n 1 57 THR n 1 58 ALA n 1 59 TRP n 1 60 ASN n 1 61 GLU n 1 62 LEU n 1 63 LYS n 1 64 ALA n 1 65 VAL n 1 66 SER n 1 67 PRO n 1 68 LEU n 1 69 CYS n 1 70 ARG n 1 71 PRO n 1 72 ALA n 1 73 ALA n 1 74 GLU n 1 75 ALA n 1 76 LEU n 1 77 LEU n 1 78 CYS n 1 79 ASN n 1 80 HIS n 1 81 LEU n 1 82 PHE n 1 83 GLN n 1 84 GLU n 1 85 CYS n 1 86 SER n 1 87 PRO n 1 88 GLY n 1 89 VAL n 1 90 LEU n 1 91 PRO n 1 92 THR n 1 93 PRO n 1 94 MET n 1 95 PRO n 1 96 ILE n 1 97 CYS n 1 98 ARG n 1 99 GLU n 1 100 TYR n 1 101 CYS n 1 102 LEU n 1 103 ALA n 1 104 VAL n 1 105 LYS n 1 106 GLU n 1 107 LEU n 1 108 PHE n 1 109 CYS n 1 110 ALA n 1 111 LYS n 1 112 GLU n 1 113 TRP n 1 114 LEU n 1 115 ALA n 1 116 MET n 1 117 GLU n 1 118 GLY n 1 119 LYS n 1 120 THR n 1 121 HIS n 1 122 ARG n 1 123 GLY n 1 124 LEU n 1 125 TYR n 1 126 ARG n 1 127 SER n 1 128 GLY n 1 129 MET n 1 130 HIS n 1 131 PHE n 1 132 LEU n 1 133 PRO n 1 134 VAL n 1 135 PRO n 1 136 GLU n 1 137 CYS n 1 138 SER n 1 139 LYS n 1 140 LEU n 1 141 PRO n 1 142 SER n 1 143 MET n 1 144 HIS n 1 145 GLN n 1 146 ASP n 1 147 PRO n 1 148 THR n 1 149 ALA n 1 150 CYS n 1 151 THR n 1 152 ARG n 1 153 LEU n 1 154 PRO n 1 155 TYR n 1 156 LEU n 1 157 ASP n 1 158 TYR n 1 159 LYS n 1 160 LYS n 1 161 GLU n 1 162 ASN n 1 163 ILE n 1 164 THR n 1 165 THR n 1 166 PHE n 1 167 PRO n 1 168 SER n 1 169 ILE n 1 170 THR n 1 171 SER n 1 172 SER n 1 173 LYS n 1 174 PRO n 1 175 SER n 1 176 VAL n 1 177 ASP n 1 178 ILE n 1 179 PRO n 1 180 ASN n 1 181 LEU n 1 182 PRO n 1 183 ALA n 1 184 SER n 1 185 THR n 1 186 SER n 1 187 SER n 1 188 PHE n 1 189 ALA n 1 190 VAL n 1 191 SER n 1 192 PRO n 1 193 ALA n 1 194 TYR n 1 195 SER n 1 196 MET n 1 197 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name rat _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Musk _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Rattus norvegicus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10116 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Spodoptera frugiperda' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type BACULOVIRUS _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PACGP67 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MUSK_RAT _struct_ref.pdbx_db_accession Q62838 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SKGYCAQYRGEVCDAVLVKDSLVFFNTSYPDPEEAQELLIHTAWNELKAVSPLCRPAAEALLCNHLFQECSPGVLPTPMP ICREYCLAVKELFCAKEWLAMEGKTHRGLYRSGMHFLPVPECSKLPSMHQDPTACTRLPYLDYKKENITTFPSITSSKPS VDIPNLPASTSSFAVSPAYSMT ; _struct_ref.pdbx_align_begin 313 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3HKL A 16 ? 197 ? Q62838 313 ? 494 ? 313 494 2 1 3HKL B 16 ? 197 ? Q62838 313 ? 494 ? 313 494 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3HKL ALA A 1 ? UNP Q62838 ? ? 'expression tag' 298 1 1 3HKL ASP A 2 ? UNP Q62838 ? ? 'expression tag' 299 2 1 3HKL LEU A 3 ? UNP Q62838 ? ? 'expression tag' 300 3 1 3HKL GLY A 4 ? UNP Q62838 ? ? 'expression tag' 301 4 1 3HKL SER A 5 ? UNP Q62838 ? ? 'expression tag' 302 5 1 3HKL HIS A 6 ? UNP Q62838 ? ? 'expression tag' 303 6 1 3HKL HIS A 7 ? UNP Q62838 ? ? 'expression tag' 304 7 1 3HKL HIS A 8 ? UNP Q62838 ? ? 'expression tag' 305 8 1 3HKL HIS A 9 ? UNP Q62838 ? ? 'expression tag' 306 9 1 3HKL HIS A 10 ? UNP Q62838 ? ? 'expression tag' 307 10 1 3HKL HIS A 11 ? UNP Q62838 ? ? 'expression tag' 308 11 1 3HKL GLY A 12 ? UNP Q62838 ? ? 'expression tag' 309 12 1 3HKL PRO A 13 ? UNP Q62838 ? ? 'expression tag' 310 13 1 3HKL ARG A 14 ? UNP Q62838 ? ? 'expression tag' 311 14 1 3HKL GLY A 15 ? UNP Q62838 ? ? 'expression tag' 312 15 2 3HKL ALA B 1 ? UNP Q62838 ? ? 'expression tag' 298 16 2 3HKL ASP B 2 ? UNP Q62838 ? ? 'expression tag' 299 17 2 3HKL LEU B 3 ? UNP Q62838 ? ? 'expression tag' 300 18 2 3HKL GLY B 4 ? UNP Q62838 ? ? 'expression tag' 301 19 2 3HKL SER B 5 ? UNP Q62838 ? ? 'expression tag' 302 20 2 3HKL HIS B 6 ? UNP Q62838 ? ? 'expression tag' 303 21 2 3HKL HIS B 7 ? UNP Q62838 ? ? 'expression tag' 304 22 2 3HKL HIS B 8 ? UNP Q62838 ? ? 'expression tag' 305 23 2 3HKL HIS B 9 ? UNP Q62838 ? ? 'expression tag' 306 24 2 3HKL HIS B 10 ? UNP Q62838 ? ? 'expression tag' 307 25 2 3HKL HIS B 11 ? UNP Q62838 ? ? 'expression tag' 308 26 2 3HKL GLY B 12 ? UNP Q62838 ? ? 'expression tag' 309 27 2 3HKL PRO B 13 ? UNP Q62838 ? ? 'expression tag' 310 28 2 3HKL ARG B 14 ? UNP Q62838 ? ? 'expression tag' 311 29 2 3HKL GLY B 15 ? UNP Q62838 ? ? 'expression tag' 312 30 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ? 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3HKL _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.20 _exptl_crystal.density_percent_sol 44.02 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '5% PEG 4000, 0.2M SODIUM ACETATE, 0.1M TRIS PH 8.5, 5% GLYCEROL, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 345 mm plate' _diffrn_detector.pdbx_collection_date 2006-09-29 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9787 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4C' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4C _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9787 # _reflns.entry_id 3HKL _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 34.47 _reflns.d_resolution_high 2.1 _reflns.number_obs 22050 _reflns.number_all 22374 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.1 _reflns_shell.d_res_low 2.18 _reflns_shell.percent_possible_all 96.9 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.299 _reflns_shell.meanI_over_sigI_obs 4.5 _reflns_shell.pdbx_redundancy 2.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3HKL _refine.ls_number_reflns_obs 20869 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 34.47 _refine.ls_d_res_high 2.10 _refine.ls_percent_reflns_obs 97.70 _refine.ls_R_factor_obs 0.22822 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.22619 _refine.ls_R_factor_R_free 0.26433 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1129 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.939 _refine.correlation_coeff_Fo_to_Fc_free 0.922 _refine.B_iso_mean 37.338 _refine.aniso_B[1][1] -0.10 _refine.aniso_B[2][2] 0.84 _refine.aniso_B[3][3] 0.46 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 1.91 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.220 _refine.pdbx_overall_ESU_R_Free 0.191 _refine.overall_SU_ML 0.134 _refine.overall_SU_B 4.892 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2230 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 56 _refine_hist.number_atoms_solvent 63 _refine_hist.number_atoms_total 2349 _refine_hist.d_res_high 2.10 _refine_hist.d_res_low 34.47 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.007 0.022 ? 2366 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.068 2.008 ? 3243 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.483 5.000 ? 291 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 33.901 23.750 ? 88 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 12.679 15.000 ? 340 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 20.357 15.000 ? 9 'X-RAY DIFFRACTION' ? r_chiral_restr 0.069 0.200 ? 366 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.003 0.020 ? 1778 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.184 0.200 ? 990 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.298 0.200 ? 1605 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.112 0.200 ? 99 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.163 0.200 ? 47 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.135 0.200 ? 10 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.549 1.500 ? 1523 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.960 2.000 ? 2375 'X-RAY DIFFRACTION' ? r_scbond_it 1.173 3.000 ? 964 'X-RAY DIFFRACTION' ? r_scangle_it 1.985 4.500 ? 868 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.100 _refine_ls_shell.d_res_low 2.155 _refine_ls_shell.number_reflns_R_work 1505 _refine_ls_shell.R_factor_R_work 0.259 _refine_ls_shell.percent_reflns_obs 96.68 _refine_ls_shell.R_factor_R_free 0.309 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 67 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3HKL _struct.title 'Crystal Structure of the Frizzled-like Cysteine-rich Domain of MuSK' _struct.pdbx_descriptor 'Muscle, skeletal receptor tyrosine protein kinase (E.C.2.7.10.1)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3HKL _struct_keywords.pdbx_keywords 'Transferase,Signaling protein' _struct_keywords.text ;MuSK, RECEPTOR TYROSINE KINASE, FRIZZLED CRD, ATP-binding, Disulfide bond, Glycoprotein, Immunoglobulin domain, Kinase, Membrane, Nucleotide-binding, Phosphoprotein, Receptor, Transmembrane, Tyrosine-protein kinase, Transferase, Signaling protein ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 46 ? LYS A 63 ? ASP A 343 LYS A 360 1 ? 18 HELX_P HELX_P2 2 CYS A 69 ? PHE A 82 ? CYS A 366 PHE A 379 1 ? 14 HELX_P HELX_P3 3 CYS A 97 ? LEU A 107 ? CYS A 394 LEU A 404 1 ? 11 HELX_P HELX_P4 4 GLU A 112 ? GLY A 128 ? GLU A 409 GLY A 425 1 ? 17 HELX_P HELX_P5 5 GLU A 136 ? LEU A 140 ? GLU A 433 LEU A 437 5 ? 5 HELX_P HELX_P6 6 ASP B 46 ? LEU B 62 ? ASP B 343 LEU B 359 1 ? 17 HELX_P HELX_P7 7 LEU B 68 ? PHE B 82 ? LEU B 365 PHE B 379 1 ? 15 HELX_P HELX_P8 8 CYS B 97 ? LEU B 107 ? CYS B 394 LEU B 404 1 ? 11 HELX_P HELX_P9 9 LYS B 119 ? GLY B 123 ? LYS B 416 GLY B 420 5 ? 5 HELX_P HELX_P10 10 GLU B 136 ? LEU B 140 ? GLU B 433 LEU B 437 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 20 SG ? ? ? 1_555 A CYS 85 SG ? ? A CYS 317 A CYS 382 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf2 disulf ? ? A CYS 28 SG ? ? ? 1_555 A CYS 78 SG ? ? A CYS 325 A CYS 375 1_555 ? ? ? ? ? ? ? 2.054 ? ? disulf3 disulf ? ? A CYS 69 SG ? ? ? 1_555 A CYS 109 SG ? ? A CYS 366 A CYS 406 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf4 disulf ? ? A CYS 97 SG ? ? ? 1_555 A CYS 150 SG ? ? A CYS 394 A CYS 447 1_555 ? ? ? ? ? ? ? 2.052 ? ? disulf5 disulf ? ? A CYS 101 SG ? ? ? 1_555 A CYS 137 SG ? ? A CYS 398 A CYS 434 1_555 ? ? ? ? ? ? ? 2.054 ? ? disulf6 disulf ? ? B CYS 20 SG ? ? ? 1_555 B CYS 85 SG ? ? B CYS 317 B CYS 382 1_555 ? ? ? ? ? ? ? 2.007 ? ? disulf7 disulf ? ? B CYS 28 SG ? ? ? 1_555 B CYS 78 SG ? ? B CYS 325 B CYS 375 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf8 disulf ? ? B CYS 69 SG ? ? ? 1_555 B CYS 109 SG ? ? B CYS 366 B CYS 406 1_555 ? ? ? ? ? ? ? 2.027 ? ? disulf9 disulf ? ? B CYS 97 SG ? ? ? 1_555 B CYS 150 SG ? ? B CYS 394 B CYS 447 1_555 ? ? ? ? ? ? ? 2.038 ? ? disulf10 disulf ? ? B CYS 101 SG ? ? ? 1_555 B CYS 137 SG ? ? B CYS 398 B CYS 434 1_555 ? ? ? ? ? ? ? 2.049 ? ? covale1 covale one ? A ASN 41 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 338 C NAG 1 1_555 ? ? ? ? ? ? ? 1.439 ? N-Glycosylation covale2 covale one ? B ASN 41 ND2 ? ? ? 1_555 D NAG . C1 ? ? B ASN 338 D NAG 1 1_555 ? ? ? ? ? ? ? 1.453 ? N-Glycosylation covale3 covale both ? C NAG . O4 ? ? ? 1_555 C NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.444 ? ? covale4 covale both ? D NAG . O4 ? ? ? 1_555 D NAG . C1 ? ? D NAG 1 D NAG 2 1_555 ? ? ? ? ? ? ? 1.451 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 18 ? ALA A 21 ? GLY A 315 ALA A 318 A 2 VAL A 38 ? ASN A 41 ? VAL A 335 ASN A 338 B 1 GLY B 18 ? GLN B 22 ? GLY B 315 GLN B 319 B 2 LEU B 37 ? ASN B 41 ? LEU B 334 ASN B 338 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 19 ? N TYR A 316 O PHE A 40 ? O PHE A 337 B 1 2 N ALA B 21 ? N ALA B 318 O VAL B 38 ? O VAL B 335 # _database_PDB_matrix.entry_id 3HKL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3HKL _atom_sites.fract_transf_matrix[1][1] 0.015246 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005033 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022511 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015146 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 298 ? ? ? A . n A 1 2 ASP 2 299 ? ? ? A . n A 1 3 LEU 3 300 ? ? ? A . n A 1 4 GLY 4 301 ? ? ? A . n A 1 5 SER 5 302 ? ? ? A . n A 1 6 HIS 6 303 ? ? ? A . n A 1 7 HIS 7 304 ? ? ? A . n A 1 8 HIS 8 305 ? ? ? A . n A 1 9 HIS 9 306 ? ? ? A . n A 1 10 HIS 10 307 ? ? ? A . n A 1 11 HIS 11 308 ? ? ? A . n A 1 12 GLY 12 309 ? ? ? A . n A 1 13 PRO 13 310 ? ? ? A . n A 1 14 ARG 14 311 ? ? ? A . n A 1 15 GLY 15 312 ? ? ? A . n A 1 16 SER 16 313 ? ? ? A . n A 1 17 LYS 17 314 314 LYS LYS A . n A 1 18 GLY 18 315 315 GLY GLY A . n A 1 19 TYR 19 316 316 TYR TYR A . n A 1 20 CYS 20 317 317 CYS CYS A . n A 1 21 ALA 21 318 318 ALA ALA A . n A 1 22 GLN 22 319 319 GLN GLN A . n A 1 23 TYR 23 320 320 TYR TYR A . n A 1 24 ARG 24 321 321 ARG ARG A . n A 1 25 GLY 25 322 322 GLY GLY A . n A 1 26 GLU 26 323 323 GLU GLU A . n A 1 27 VAL 27 324 324 VAL VAL A . n A 1 28 CYS 28 325 325 CYS CYS A . n A 1 29 ASP 29 326 326 ASP ASP A . n A 1 30 ALA 30 327 327 ALA ALA A . n A 1 31 VAL 31 328 328 VAL VAL A . n A 1 32 LEU 32 329 329 LEU LEU A . n A 1 33 VAL 33 330 330 VAL VAL A . n A 1 34 LYS 34 331 331 LYS LYS A . n A 1 35 ASP 35 332 332 ASP ASP A . n A 1 36 SER 36 333 333 SER SER A . n A 1 37 LEU 37 334 334 LEU LEU A . n A 1 38 VAL 38 335 335 VAL VAL A . n A 1 39 PHE 39 336 336 PHE PHE A . n A 1 40 PHE 40 337 337 PHE PHE A . n A 1 41 ASN 41 338 338 ASN ASN A . n A 1 42 THR 42 339 339 THR THR A . n A 1 43 SER 43 340 340 SER SER A . n A 1 44 TYR 44 341 341 TYR TYR A . n A 1 45 PRO 45 342 342 PRO PRO A . n A 1 46 ASP 46 343 343 ASP ASP A . n A 1 47 PRO 47 344 344 PRO PRO A . n A 1 48 GLU 48 345 345 GLU GLU A . n A 1 49 GLU 49 346 346 GLU GLU A . n A 1 50 ALA 50 347 347 ALA ALA A . n A 1 51 GLN 51 348 348 GLN GLN A . n A 1 52 GLU 52 349 349 GLU GLU A . n A 1 53 LEU 53 350 350 LEU LEU A . n A 1 54 LEU 54 351 351 LEU LEU A . n A 1 55 ILE 55 352 352 ILE ILE A . n A 1 56 HIS 56 353 353 HIS HIS A . n A 1 57 THR 57 354 354 THR THR A . n A 1 58 ALA 58 355 355 ALA ALA A . n A 1 59 TRP 59 356 356 TRP TRP A . n A 1 60 ASN 60 357 357 ASN ASN A . n A 1 61 GLU 61 358 358 GLU GLU A . n A 1 62 LEU 62 359 359 LEU LEU A . n A 1 63 LYS 63 360 360 LYS LYS A . n A 1 64 ALA 64 361 361 ALA ALA A . n A 1 65 VAL 65 362 362 VAL VAL A . n A 1 66 SER 66 363 363 SER SER A . n A 1 67 PRO 67 364 364 PRO PRO A . n A 1 68 LEU 68 365 365 LEU LEU A . n A 1 69 CYS 69 366 366 CYS CYS A . n A 1 70 ARG 70 367 367 ARG ARG A . n A 1 71 PRO 71 368 368 PRO PRO A . n A 1 72 ALA 72 369 369 ALA ALA A . n A 1 73 ALA 73 370 370 ALA ALA A . n A 1 74 GLU 74 371 371 GLU GLU A . n A 1 75 ALA 75 372 372 ALA ALA A . n A 1 76 LEU 76 373 373 LEU LEU A . n A 1 77 LEU 77 374 374 LEU LEU A . n A 1 78 CYS 78 375 375 CYS CYS A . n A 1 79 ASN 79 376 376 ASN ASN A . n A 1 80 HIS 80 377 377 HIS HIS A . n A 1 81 LEU 81 378 378 LEU LEU A . n A 1 82 PHE 82 379 379 PHE PHE A . n A 1 83 GLN 83 380 380 GLN GLN A . n A 1 84 GLU 84 381 381 GLU GLU A . n A 1 85 CYS 85 382 382 CYS CYS A . n A 1 86 SER 86 383 383 SER SER A . n A 1 87 PRO 87 384 384 PRO PRO A . n A 1 88 GLY 88 385 385 GLY GLY A . n A 1 89 VAL 89 386 386 VAL VAL A . n A 1 90 LEU 90 387 387 LEU LEU A . n A 1 91 PRO 91 388 388 PRO PRO A . n A 1 92 THR 92 389 389 THR THR A . n A 1 93 PRO 93 390 390 PRO PRO A . n A 1 94 MET 94 391 391 MET MET A . n A 1 95 PRO 95 392 392 PRO PRO A . n A 1 96 ILE 96 393 393 ILE ILE A . n A 1 97 CYS 97 394 394 CYS CYS A . n A 1 98 ARG 98 395 395 ARG ARG A . n A 1 99 GLU 99 396 396 GLU GLU A . n A 1 100 TYR 100 397 397 TYR TYR A . n A 1 101 CYS 101 398 398 CYS CYS A . n A 1 102 LEU 102 399 399 LEU LEU A . n A 1 103 ALA 103 400 400 ALA ALA A . n A 1 104 VAL 104 401 401 VAL VAL A . n A 1 105 LYS 105 402 402 LYS LYS A . n A 1 106 GLU 106 403 403 GLU GLU A . n A 1 107 LEU 107 404 404 LEU LEU A . n A 1 108 PHE 108 405 405 PHE PHE A . n A 1 109 CYS 109 406 406 CYS CYS A . n A 1 110 ALA 110 407 407 ALA ALA A . n A 1 111 LYS 111 408 408 LYS LYS A . n A 1 112 GLU 112 409 409 GLU GLU A . n A 1 113 TRP 113 410 410 TRP TRP A . n A 1 114 LEU 114 411 411 LEU LEU A . n A 1 115 ALA 115 412 412 ALA ALA A . n A 1 116 MET 116 413 413 MET MET A . n A 1 117 GLU 117 414 414 GLU GLU A . n A 1 118 GLY 118 415 415 GLY GLY A . n A 1 119 LYS 119 416 416 LYS LYS A . n A 1 120 THR 120 417 417 THR THR A . n A 1 121 HIS 121 418 418 HIS HIS A . n A 1 122 ARG 122 419 419 ARG ARG A . n A 1 123 GLY 123 420 420 GLY GLY A . n A 1 124 LEU 124 421 421 LEU LEU A . n A 1 125 TYR 125 422 422 TYR TYR A . n A 1 126 ARG 126 423 423 ARG ARG A . n A 1 127 SER 127 424 424 SER SER A . n A 1 128 GLY 128 425 425 GLY GLY A . n A 1 129 MET 129 426 426 MET MET A . n A 1 130 HIS 130 427 427 HIS HIS A . n A 1 131 PHE 131 428 428 PHE PHE A . n A 1 132 LEU 132 429 429 LEU LEU A . n A 1 133 PRO 133 430 430 PRO PRO A . n A 1 134 VAL 134 431 431 VAL VAL A . n A 1 135 PRO 135 432 432 PRO PRO A . n A 1 136 GLU 136 433 433 GLU GLU A . n A 1 137 CYS 137 434 434 CYS CYS A . n A 1 138 SER 138 435 435 SER SER A . n A 1 139 LYS 139 436 436 LYS LYS A . n A 1 140 LEU 140 437 437 LEU LEU A . n A 1 141 PRO 141 438 438 PRO PRO A . n A 1 142 SER 142 439 439 SER SER A . n A 1 143 MET 143 440 440 MET MET A . n A 1 144 HIS 144 441 441 HIS HIS A . n A 1 145 GLN 145 442 442 GLN GLN A . n A 1 146 ASP 146 443 443 ASP ASP A . n A 1 147 PRO 147 444 444 PRO PRO A . n A 1 148 THR 148 445 445 THR THR A . n A 1 149 ALA 149 446 446 ALA ALA A . n A 1 150 CYS 150 447 447 CYS CYS A . n A 1 151 THR 151 448 448 THR THR A . n A 1 152 ARG 152 449 449 ARG ARG A . n A 1 153 LEU 153 450 450 LEU LEU A . n A 1 154 PRO 154 451 451 PRO PRO A . n A 1 155 TYR 155 452 452 TYR TYR A . n A 1 156 LEU 156 453 453 LEU LEU A . n A 1 157 ASP 157 454 454 ASP ASP A . n A 1 158 TYR 158 455 ? ? ? A . n A 1 159 LYS 159 456 ? ? ? A . n A 1 160 LYS 160 457 ? ? ? A . n A 1 161 GLU 161 458 ? ? ? A . n A 1 162 ASN 162 459 ? ? ? A . n A 1 163 ILE 163 460 ? ? ? A . n A 1 164 THR 164 461 ? ? ? A . n A 1 165 THR 165 462 ? ? ? A . n A 1 166 PHE 166 463 ? ? ? A . n A 1 167 PRO 167 464 ? ? ? A . n A 1 168 SER 168 465 ? ? ? A . n A 1 169 ILE 169 466 ? ? ? A . n A 1 170 THR 170 467 ? ? ? A . n A 1 171 SER 171 468 ? ? ? A . n A 1 172 SER 172 469 ? ? ? A . n A 1 173 LYS 173 470 ? ? ? A . n A 1 174 PRO 174 471 ? ? ? A . n A 1 175 SER 175 472 ? ? ? A . n A 1 176 VAL 176 473 ? ? ? A . n A 1 177 ASP 177 474 ? ? ? A . n A 1 178 ILE 178 475 ? ? ? A . n A 1 179 PRO 179 476 ? ? ? A . n A 1 180 ASN 180 477 ? ? ? A . n A 1 181 LEU 181 478 ? ? ? A . n A 1 182 PRO 182 479 ? ? ? A . n A 1 183 ALA 183 480 ? ? ? A . n A 1 184 SER 184 481 ? ? ? A . n A 1 185 THR 185 482 ? ? ? A . n A 1 186 SER 186 483 ? ? ? A . n A 1 187 SER 187 484 ? ? ? A . n A 1 188 PHE 188 485 ? ? ? A . n A 1 189 ALA 189 486 ? ? ? A . n A 1 190 VAL 190 487 ? ? ? A . n A 1 191 SER 191 488 ? ? ? A . n A 1 192 PRO 192 489 ? ? ? A . n A 1 193 ALA 193 490 ? ? ? A . n A 1 194 TYR 194 491 ? ? ? A . n A 1 195 SER 195 492 ? ? ? A . n A 1 196 MET 196 493 ? ? ? A . n A 1 197 THR 197 494 ? ? ? A . n B 1 1 ALA 1 298 ? ? ? B . n B 1 2 ASP 2 299 ? ? ? B . n B 1 3 LEU 3 300 ? ? ? B . n B 1 4 GLY 4 301 ? ? ? B . n B 1 5 SER 5 302 ? ? ? B . n B 1 6 HIS 6 303 ? ? ? B . n B 1 7 HIS 7 304 ? ? ? B . n B 1 8 HIS 8 305 ? ? ? B . n B 1 9 HIS 9 306 ? ? ? B . n B 1 10 HIS 10 307 ? ? ? B . n B 1 11 HIS 11 308 ? ? ? B . n B 1 12 GLY 12 309 309 GLY GLY B . n B 1 13 PRO 13 310 310 PRO PRO B . n B 1 14 ARG 14 311 311 ARG ARG B . n B 1 15 GLY 15 312 312 GLY GLY B . n B 1 16 SER 16 313 313 SER SER B . n B 1 17 LYS 17 314 314 LYS LYS B . n B 1 18 GLY 18 315 315 GLY GLY B . n B 1 19 TYR 19 316 316 TYR TYR B . n B 1 20 CYS 20 317 317 CYS CYS B . n B 1 21 ALA 21 318 318 ALA ALA B . n B 1 22 GLN 22 319 319 GLN GLN B . n B 1 23 TYR 23 320 320 TYR TYR B . n B 1 24 ARG 24 321 321 ARG ARG B . n B 1 25 GLY 25 322 322 GLY GLY B . n B 1 26 GLU 26 323 323 GLU GLU B . n B 1 27 VAL 27 324 324 VAL VAL B . n B 1 28 CYS 28 325 325 CYS CYS B . n B 1 29 ASP 29 326 326 ASP ASP B . n B 1 30 ALA 30 327 327 ALA ALA B . n B 1 31 VAL 31 328 328 VAL VAL B . n B 1 32 LEU 32 329 329 LEU LEU B . n B 1 33 VAL 33 330 330 VAL VAL B . n B 1 34 LYS 34 331 331 LYS LYS B . n B 1 35 ASP 35 332 332 ASP ASP B . n B 1 36 SER 36 333 333 SER SER B . n B 1 37 LEU 37 334 334 LEU LEU B . n B 1 38 VAL 38 335 335 VAL VAL B . n B 1 39 PHE 39 336 336 PHE PHE B . n B 1 40 PHE 40 337 337 PHE PHE B . n B 1 41 ASN 41 338 338 ASN ASN B . n B 1 42 THR 42 339 339 THR THR B . n B 1 43 SER 43 340 340 SER SER B . n B 1 44 TYR 44 341 341 TYR TYR B . n B 1 45 PRO 45 342 342 PRO PRO B . n B 1 46 ASP 46 343 343 ASP ASP B . n B 1 47 PRO 47 344 344 PRO PRO B . n B 1 48 GLU 48 345 345 GLU GLU B . n B 1 49 GLU 49 346 346 GLU GLU B . n B 1 50 ALA 50 347 347 ALA ALA B . n B 1 51 GLN 51 348 348 GLN GLN B . n B 1 52 GLU 52 349 349 GLU GLU B . n B 1 53 LEU 53 350 350 LEU LEU B . n B 1 54 LEU 54 351 351 LEU LEU B . n B 1 55 ILE 55 352 352 ILE ILE B . n B 1 56 HIS 56 353 353 HIS HIS B . n B 1 57 THR 57 354 354 THR THR B . n B 1 58 ALA 58 355 355 ALA ALA B . n B 1 59 TRP 59 356 356 TRP TRP B . n B 1 60 ASN 60 357 357 ASN ASN B . n B 1 61 GLU 61 358 358 GLU GLU B . n B 1 62 LEU 62 359 359 LEU LEU B . n B 1 63 LYS 63 360 360 LYS LYS B . n B 1 64 ALA 64 361 361 ALA ALA B . n B 1 65 VAL 65 362 362 VAL VAL B . n B 1 66 SER 66 363 363 SER SER B . n B 1 67 PRO 67 364 364 PRO PRO B . n B 1 68 LEU 68 365 365 LEU LEU B . n B 1 69 CYS 69 366 366 CYS CYS B . n B 1 70 ARG 70 367 367 ARG ARG B . n B 1 71 PRO 71 368 368 PRO PRO B . n B 1 72 ALA 72 369 369 ALA ALA B . n B 1 73 ALA 73 370 370 ALA ALA B . n B 1 74 GLU 74 371 371 GLU GLU B . n B 1 75 ALA 75 372 372 ALA ALA B . n B 1 76 LEU 76 373 373 LEU LEU B . n B 1 77 LEU 77 374 374 LEU LEU B . n B 1 78 CYS 78 375 375 CYS CYS B . n B 1 79 ASN 79 376 376 ASN ASN B . n B 1 80 HIS 80 377 377 HIS HIS B . n B 1 81 LEU 81 378 378 LEU LEU B . n B 1 82 PHE 82 379 379 PHE PHE B . n B 1 83 GLN 83 380 380 GLN GLN B . n B 1 84 GLU 84 381 381 GLU GLU B . n B 1 85 CYS 85 382 382 CYS CYS B . n B 1 86 SER 86 383 383 SER SER B . n B 1 87 PRO 87 384 384 PRO PRO B . n B 1 88 GLY 88 385 385 GLY GLY B . n B 1 89 VAL 89 386 386 VAL VAL B . n B 1 90 LEU 90 387 387 LEU LEU B . n B 1 91 PRO 91 388 388 PRO PRO B . n B 1 92 THR 92 389 389 THR THR B . n B 1 93 PRO 93 390 390 PRO PRO B . n B 1 94 MET 94 391 391 MET MET B . n B 1 95 PRO 95 392 392 PRO PRO B . n B 1 96 ILE 96 393 393 ILE ILE B . n B 1 97 CYS 97 394 394 CYS CYS B . n B 1 98 ARG 98 395 395 ARG ARG B . n B 1 99 GLU 99 396 396 GLU GLU B . n B 1 100 TYR 100 397 397 TYR TYR B . n B 1 101 CYS 101 398 398 CYS CYS B . n B 1 102 LEU 102 399 399 LEU LEU B . n B 1 103 ALA 103 400 400 ALA ALA B . n B 1 104 VAL 104 401 401 VAL VAL B . n B 1 105 LYS 105 402 402 LYS LYS B . n B 1 106 GLU 106 403 403 GLU GLU B . n B 1 107 LEU 107 404 404 LEU LEU B . n B 1 108 PHE 108 405 405 PHE PHE B . n B 1 109 CYS 109 406 406 CYS CYS B . n B 1 110 ALA 110 407 407 ALA ALA B . n B 1 111 LYS 111 408 408 LYS LYS B . n B 1 112 GLU 112 409 409 GLU GLU B . n B 1 113 TRP 113 410 410 TRP TRP B . n B 1 114 LEU 114 411 411 LEU LEU B . n B 1 115 ALA 115 412 412 ALA ALA B . n B 1 116 MET 116 413 413 MET MET B . n B 1 117 GLU 117 414 414 GLU GLU B . n B 1 118 GLY 118 415 415 GLY GLY B . n B 1 119 LYS 119 416 416 LYS LYS B . n B 1 120 THR 120 417 417 THR THR B . n B 1 121 HIS 121 418 418 HIS HIS B . n B 1 122 ARG 122 419 419 ARG ARG B . n B 1 123 GLY 123 420 420 GLY GLY B . n B 1 124 LEU 124 421 421 LEU LEU B . n B 1 125 TYR 125 422 422 TYR TYR B . n B 1 126 ARG 126 423 423 ARG ARG B . n B 1 127 SER 127 424 424 SER SER B . n B 1 128 GLY 128 425 425 GLY GLY B . n B 1 129 MET 129 426 426 MET MET B . n B 1 130 HIS 130 427 427 HIS HIS B . n B 1 131 PHE 131 428 428 PHE PHE B . n B 1 132 LEU 132 429 429 LEU LEU B . n B 1 133 PRO 133 430 430 PRO PRO B . n B 1 134 VAL 134 431 431 VAL VAL B . n B 1 135 PRO 135 432 432 PRO PRO B . n B 1 136 GLU 136 433 433 GLU GLU B . n B 1 137 CYS 137 434 434 CYS CYS B . n B 1 138 SER 138 435 435 SER SER B . n B 1 139 LYS 139 436 436 LYS LYS B . n B 1 140 LEU 140 437 437 LEU LEU B . n B 1 141 PRO 141 438 438 PRO PRO B . n B 1 142 SER 142 439 439 SER SER B . n B 1 143 MET 143 440 440 MET MET B . n B 1 144 HIS 144 441 441 HIS HIS B . n B 1 145 GLN 145 442 442 GLN GLN B . n B 1 146 ASP 146 443 443 ASP ASP B . n B 1 147 PRO 147 444 444 PRO PRO B . n B 1 148 THR 148 445 445 THR THR B . n B 1 149 ALA 149 446 446 ALA ALA B . n B 1 150 CYS 150 447 447 CYS CYS B . n B 1 151 THR 151 448 448 THR THR B . n B 1 152 ARG 152 449 449 ARG ARG B . n B 1 153 LEU 153 450 450 LEU LEU B . n B 1 154 PRO 154 451 451 PRO PRO B . n B 1 155 TYR 155 452 452 TYR TYR B . n B 1 156 LEU 156 453 453 LEU LEU B . n B 1 157 ASP 157 454 454 ASP ASP B . n B 1 158 TYR 158 455 455 TYR TYR B . n B 1 159 LYS 159 456 456 LYS LYS B . n B 1 160 LYS 160 457 ? ? ? B . n B 1 161 GLU 161 458 ? ? ? B . n B 1 162 ASN 162 459 ? ? ? B . n B 1 163 ILE 163 460 ? ? ? B . n B 1 164 THR 164 461 ? ? ? B . n B 1 165 THR 165 462 462 THR THR B . n B 1 166 PHE 166 463 463 PHE PHE B . n B 1 167 PRO 167 464 464 PRO PRO B . n B 1 168 SER 168 465 465 SER SER B . n B 1 169 ILE 169 466 466 ILE ILE B . n B 1 170 THR 170 467 ? ? ? B . n B 1 171 SER 171 468 ? ? ? B . n B 1 172 SER 172 469 ? ? ? B . n B 1 173 LYS 173 470 ? ? ? B . n B 1 174 PRO 174 471 ? ? ? B . n B 1 175 SER 175 472 ? ? ? B . n B 1 176 VAL 176 473 ? ? ? B . n B 1 177 ASP 177 474 ? ? ? B . n B 1 178 ILE 178 475 ? ? ? B . n B 1 179 PRO 179 476 ? ? ? B . n B 1 180 ASN 180 477 ? ? ? B . n B 1 181 LEU 181 478 ? ? ? B . n B 1 182 PRO 182 479 ? ? ? B . n B 1 183 ALA 183 480 ? ? ? B . n B 1 184 SER 184 481 ? ? ? B . n B 1 185 THR 185 482 ? ? ? B . n B 1 186 SER 186 483 ? ? ? B . n B 1 187 SER 187 484 ? ? ? B . n B 1 188 PHE 188 485 ? ? ? B . n B 1 189 ALA 189 486 ? ? ? B . n B 1 190 VAL 190 487 ? ? ? B . n B 1 191 SER 191 488 ? ? ? B . n B 1 192 PRO 192 489 ? ? ? B . n B 1 193 ALA 193 490 ? ? ? B . n B 1 194 TYR 194 491 ? ? ? B . n B 1 195 SER 195 492 ? ? ? B . n B 1 196 MET 196 493 ? ? ? B . n B 1 197 THR 197 494 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HOH 1 7 7 HOH HOH A . E 3 HOH 2 8 8 HOH HOH A . E 3 HOH 3 11 11 HOH HOH A . E 3 HOH 4 12 12 HOH HOH A . E 3 HOH 5 13 13 HOH HOH A . E 3 HOH 6 14 14 HOH HOH A . E 3 HOH 7 15 15 HOH HOH A . E 3 HOH 8 16 16 HOH HOH A . E 3 HOH 9 17 17 HOH HOH A . E 3 HOH 10 19 19 HOH HOH A . E 3 HOH 11 20 20 HOH HOH A . E 3 HOH 12 26 26 HOH HOH A . E 3 HOH 13 34 34 HOH HOH A . E 3 HOH 14 36 36 HOH HOH A . E 3 HOH 15 41 41 HOH HOH A . E 3 HOH 16 43 43 HOH HOH A . E 3 HOH 17 46 46 HOH HOH A . E 3 HOH 18 49 49 HOH HOH A . E 3 HOH 19 51 51 HOH HOH A . E 3 HOH 20 54 54 HOH HOH A . E 3 HOH 21 55 55 HOH HOH A . E 3 HOH 22 56 56 HOH HOH A . F 3 HOH 1 1 1 HOH HOH B . F 3 HOH 2 2 2 HOH HOH B . F 3 HOH 3 3 3 HOH HOH B . F 3 HOH 4 4 4 HOH HOH B . F 3 HOH 5 5 5 HOH HOH B . F 3 HOH 6 6 6 HOH HOH B . F 3 HOH 7 9 9 HOH HOH B . F 3 HOH 8 10 10 HOH HOH B . F 3 HOH 9 18 18 HOH HOH B . F 3 HOH 10 21 21 HOH HOH B . F 3 HOH 11 22 22 HOH HOH B . F 3 HOH 12 23 23 HOH HOH B . F 3 HOH 13 24 24 HOH HOH B . F 3 HOH 14 25 25 HOH HOH B . F 3 HOH 15 27 27 HOH HOH B . F 3 HOH 16 28 28 HOH HOH B . F 3 HOH 17 29 29 HOH HOH B . F 3 HOH 18 30 30 HOH HOH B . F 3 HOH 19 31 31 HOH HOH B . F 3 HOH 20 32 32 HOH HOH B . F 3 HOH 21 33 33 HOH HOH B . F 3 HOH 22 35 35 HOH HOH B . F 3 HOH 23 37 37 HOH HOH B . F 3 HOH 24 38 38 HOH HOH B . F 3 HOH 25 39 39 HOH HOH B . F 3 HOH 26 40 40 HOH HOH B . F 3 HOH 27 42 42 HOH HOH B . F 3 HOH 28 44 44 HOH HOH B . F 3 HOH 29 45 45 HOH HOH B . F 3 HOH 30 47 47 HOH HOH B . F 3 HOH 31 48 48 HOH HOH B . F 3 HOH 32 50 50 HOH HOH B . F 3 HOH 33 52 52 HOH HOH B . F 3 HOH 34 53 53 HOH HOH B . F 3 HOH 35 57 57 HOH HOH B . F 3 HOH 36 58 58 HOH HOH B . F 3 HOH 37 59 59 HOH HOH B . F 3 HOH 38 60 60 HOH HOH B . F 3 HOH 39 61 61 HOH HOH B . F 3 HOH 40 62 62 HOH HOH B . F 3 HOH 41 63 63 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 41 A ASN 338 ? ASN 'GLYCOSYLATION SITE' 2 B ASN 41 B ASN 338 ? ASN 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1650 ? 1 MORE -17 ? 1 'SSA (A^2)' 14810 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-08-25 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 2 0 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Non-polymer description' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Atomic model' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Database references' 6 3 'Structure model' 'Derived calculations' 7 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' atom_site 2 3 'Structure model' chem_comp 3 3 'Structure model' entity 4 3 'Structure model' pdbx_branch_scheme 5 3 'Structure model' pdbx_chem_comp_identifier 6 3 'Structure model' pdbx_entity_branch 7 3 'Structure model' pdbx_entity_branch_descriptor 8 3 'Structure model' pdbx_entity_branch_link 9 3 'Structure model' pdbx_entity_branch_list 10 3 'Structure model' pdbx_entity_nonpoly 11 3 'Structure model' pdbx_nonpoly_scheme 12 3 'Structure model' pdbx_struct_assembly_gen 13 3 'Structure model' struct_asym 14 3 'Structure model' struct_conn 15 3 'Structure model' struct_ref_seq_dif 16 3 'Structure model' struct_site 17 3 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_atom_site.auth_asym_id' 2 3 'Structure model' '_atom_site.auth_seq_id' 3 3 'Structure model' '_atom_site.label_asym_id' 4 3 'Structure model' '_chem_comp.name' 5 3 'Structure model' '_chem_comp.type' 6 3 'Structure model' '_entity.formula_weight' 7 3 'Structure model' '_entity.pdbx_description' 8 3 'Structure model' '_entity.pdbx_number_of_molecules' 9 3 'Structure model' '_entity.type' 10 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 11 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 3 'Structure model' '_struct_conn.pdbx_role' 13 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 14 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 15 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 16 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 17 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 18 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 19 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 HKL-2000 'data collection' . ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 387 ? ? -114.98 72.82 2 1 LEU A 404 ? ? -103.16 -69.50 3 1 TRP B 410 ? ? -123.08 -71.60 4 1 SER B 424 ? ? -116.70 53.55 5 1 ASP B 443 ? ? -164.52 99.79 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 314 ? CG ? A LYS 17 CG 2 1 Y 1 A LYS 314 ? CD ? A LYS 17 CD 3 1 Y 1 A LYS 314 ? CE ? A LYS 17 CE 4 1 Y 1 A LYS 314 ? NZ ? A LYS 17 NZ 5 1 Y 1 A LYS 331 ? CG ? A LYS 34 CG 6 1 Y 1 A LYS 331 ? CD ? A LYS 34 CD 7 1 Y 1 A LYS 331 ? CE ? A LYS 34 CE 8 1 Y 1 A LYS 331 ? NZ ? A LYS 34 NZ 9 1 Y 1 A GLU 346 ? CG ? A GLU 49 CG 10 1 Y 1 A GLU 346 ? CD ? A GLU 49 CD 11 1 Y 1 A GLU 346 ? OE1 ? A GLU 49 OE1 12 1 Y 1 A GLU 346 ? OE2 ? A GLU 49 OE2 13 1 Y 1 A ARG 395 ? CZ ? A ARG 98 CZ 14 1 Y 1 A ARG 395 ? NH1 ? A ARG 98 NH1 15 1 Y 1 A ARG 395 ? NH2 ? A ARG 98 NH2 16 1 Y 1 A GLU 433 ? CG ? A GLU 136 CG 17 1 Y 1 A GLU 433 ? CD ? A GLU 136 CD 18 1 Y 1 A GLU 433 ? OE1 ? A GLU 136 OE1 19 1 Y 1 A GLU 433 ? OE2 ? A GLU 136 OE2 20 1 Y 1 A ASP 454 ? CG ? A ASP 157 CG 21 1 Y 1 A ASP 454 ? OD1 ? A ASP 157 OD1 22 1 Y 1 A ASP 454 ? OD2 ? A ASP 157 OD2 23 1 Y 1 B ARG 311 ? CG ? B ARG 14 CG 24 1 Y 1 B ARG 311 ? CD ? B ARG 14 CD 25 1 Y 1 B ARG 311 ? NE ? B ARG 14 NE 26 1 Y 1 B ARG 311 ? CZ ? B ARG 14 CZ 27 1 Y 1 B ARG 311 ? NH1 ? B ARG 14 NH1 28 1 Y 1 B ARG 311 ? NH2 ? B ARG 14 NH2 29 1 Y 1 B LYS 331 ? CG ? B LYS 34 CG 30 1 Y 1 B LYS 331 ? CD ? B LYS 34 CD 31 1 Y 1 B LYS 331 ? CE ? B LYS 34 CE 32 1 Y 1 B LYS 331 ? NZ ? B LYS 34 NZ 33 1 Y 1 B ASP 332 ? CG ? B ASP 35 CG 34 1 Y 1 B ASP 332 ? OD1 ? B ASP 35 OD1 35 1 Y 1 B ASP 332 ? OD2 ? B ASP 35 OD2 36 1 Y 1 B LYS 408 ? CG ? B LYS 111 CG 37 1 Y 1 B LYS 408 ? CD ? B LYS 111 CD 38 1 Y 1 B LYS 408 ? CE ? B LYS 111 CE 39 1 Y 1 B LYS 408 ? NZ ? B LYS 111 NZ 40 1 Y 1 B LYS 416 ? CG ? B LYS 119 CG 41 1 Y 1 B LYS 416 ? CD ? B LYS 119 CD 42 1 Y 1 B LYS 416 ? CE ? B LYS 119 CE 43 1 Y 1 B LYS 416 ? NZ ? B LYS 119 NZ 44 1 Y 1 B ARG 419 ? CG ? B ARG 122 CG 45 1 Y 1 B ARG 419 ? CD ? B ARG 122 CD 46 1 Y 1 B ARG 419 ? NE ? B ARG 122 NE 47 1 Y 1 B ARG 419 ? CZ ? B ARG 122 CZ 48 1 Y 1 B ARG 419 ? NH1 ? B ARG 122 NH1 49 1 Y 1 B ARG 419 ? NH2 ? B ARG 122 NH2 50 1 Y 1 B GLU 433 ? CG ? B GLU 136 CG 51 1 Y 1 B GLU 433 ? CD ? B GLU 136 CD 52 1 Y 1 B GLU 433 ? OE1 ? B GLU 136 OE1 53 1 Y 1 B GLU 433 ? OE2 ? B GLU 136 OE2 54 1 Y 1 B LYS 436 ? CG ? B LYS 139 CG 55 1 Y 1 B LYS 436 ? CD ? B LYS 139 CD 56 1 Y 1 B LYS 436 ? CE ? B LYS 139 CE 57 1 Y 1 B LYS 436 ? NZ ? B LYS 139 NZ 58 1 Y 1 B GLN 442 ? CG ? B GLN 145 CG 59 1 Y 1 B GLN 442 ? CD ? B GLN 145 CD 60 1 Y 1 B GLN 442 ? OE1 ? B GLN 145 OE1 61 1 Y 1 B GLN 442 ? NE2 ? B GLN 145 NE2 62 1 Y 1 B ARG 449 ? CZ ? B ARG 152 CZ 63 1 Y 1 B ARG 449 ? NH1 ? B ARG 152 NH1 64 1 Y 1 B ARG 449 ? NH2 ? B ARG 152 NH2 65 1 Y 1 B TYR 452 ? CG ? B TYR 155 CG 66 1 Y 1 B TYR 452 ? CD1 ? B TYR 155 CD1 67 1 Y 1 B TYR 452 ? CD2 ? B TYR 155 CD2 68 1 Y 1 B TYR 452 ? CE1 ? B TYR 155 CE1 69 1 Y 1 B TYR 452 ? CE2 ? B TYR 155 CE2 70 1 Y 1 B TYR 452 ? CZ ? B TYR 155 CZ 71 1 Y 1 B TYR 452 ? OH ? B TYR 155 OH 72 1 Y 1 B LYS 456 ? CG ? B LYS 159 CG 73 1 Y 1 B LYS 456 ? CD ? B LYS 159 CD 74 1 Y 1 B LYS 456 ? CE ? B LYS 159 CE 75 1 Y 1 B LYS 456 ? NZ ? B LYS 159 NZ 76 1 Y 1 B THR 462 ? OG1 ? B THR 165 OG1 77 1 Y 1 B THR 462 ? CG2 ? B THR 165 CG2 78 1 Y 1 B ILE 466 ? CG1 ? B ILE 169 CG1 79 1 Y 1 B ILE 466 ? CG2 ? B ILE 169 CG2 80 1 Y 1 B ILE 466 ? CD1 ? B ILE 169 CD1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 298 ? A ALA 1 2 1 Y 1 A ASP 299 ? A ASP 2 3 1 Y 1 A LEU 300 ? A LEU 3 4 1 Y 1 A GLY 301 ? A GLY 4 5 1 Y 1 A SER 302 ? A SER 5 6 1 Y 1 A HIS 303 ? A HIS 6 7 1 Y 1 A HIS 304 ? A HIS 7 8 1 Y 1 A HIS 305 ? A HIS 8 9 1 Y 1 A HIS 306 ? A HIS 9 10 1 Y 1 A HIS 307 ? A HIS 10 11 1 Y 1 A HIS 308 ? A HIS 11 12 1 Y 1 A GLY 309 ? A GLY 12 13 1 Y 1 A PRO 310 ? A PRO 13 14 1 Y 1 A ARG 311 ? A ARG 14 15 1 Y 1 A GLY 312 ? A GLY 15 16 1 Y 1 A SER 313 ? A SER 16 17 1 Y 1 A TYR 455 ? A TYR 158 18 1 Y 1 A LYS 456 ? A LYS 159 19 1 Y 1 A LYS 457 ? A LYS 160 20 1 Y 1 A GLU 458 ? A GLU 161 21 1 Y 1 A ASN 459 ? A ASN 162 22 1 Y 1 A ILE 460 ? A ILE 163 23 1 Y 1 A THR 461 ? A THR 164 24 1 Y 1 A THR 462 ? A THR 165 25 1 Y 1 A PHE 463 ? A PHE 166 26 1 Y 1 A PRO 464 ? A PRO 167 27 1 Y 1 A SER 465 ? A SER 168 28 1 Y 1 A ILE 466 ? A ILE 169 29 1 Y 1 A THR 467 ? A THR 170 30 1 Y 1 A SER 468 ? A SER 171 31 1 Y 1 A SER 469 ? A SER 172 32 1 Y 1 A LYS 470 ? A LYS 173 33 1 Y 1 A PRO 471 ? A PRO 174 34 1 Y 1 A SER 472 ? A SER 175 35 1 Y 1 A VAL 473 ? A VAL 176 36 1 Y 1 A ASP 474 ? A ASP 177 37 1 Y 1 A ILE 475 ? A ILE 178 38 1 Y 1 A PRO 476 ? A PRO 179 39 1 Y 1 A ASN 477 ? A ASN 180 40 1 Y 1 A LEU 478 ? A LEU 181 41 1 Y 1 A PRO 479 ? A PRO 182 42 1 Y 1 A ALA 480 ? A ALA 183 43 1 Y 1 A SER 481 ? A SER 184 44 1 Y 1 A THR 482 ? A THR 185 45 1 Y 1 A SER 483 ? A SER 186 46 1 Y 1 A SER 484 ? A SER 187 47 1 Y 1 A PHE 485 ? A PHE 188 48 1 Y 1 A ALA 486 ? A ALA 189 49 1 Y 1 A VAL 487 ? A VAL 190 50 1 Y 1 A SER 488 ? A SER 191 51 1 Y 1 A PRO 489 ? A PRO 192 52 1 Y 1 A ALA 490 ? A ALA 193 53 1 Y 1 A TYR 491 ? A TYR 194 54 1 Y 1 A SER 492 ? A SER 195 55 1 Y 1 A MET 493 ? A MET 196 56 1 Y 1 A THR 494 ? A THR 197 57 1 Y 1 B ALA 298 ? B ALA 1 58 1 Y 1 B ASP 299 ? B ASP 2 59 1 Y 1 B LEU 300 ? B LEU 3 60 1 Y 1 B GLY 301 ? B GLY 4 61 1 Y 1 B SER 302 ? B SER 5 62 1 Y 1 B HIS 303 ? B HIS 6 63 1 Y 1 B HIS 304 ? B HIS 7 64 1 Y 1 B HIS 305 ? B HIS 8 65 1 Y 1 B HIS 306 ? B HIS 9 66 1 Y 1 B HIS 307 ? B HIS 10 67 1 Y 1 B HIS 308 ? B HIS 11 68 1 Y 1 B LYS 457 ? B LYS 160 69 1 Y 1 B GLU 458 ? B GLU 161 70 1 Y 1 B ASN 459 ? B ASN 162 71 1 Y 1 B ILE 460 ? B ILE 163 72 1 Y 1 B THR 461 ? B THR 164 73 1 Y 1 B THR 467 ? B THR 170 74 1 Y 1 B SER 468 ? B SER 171 75 1 Y 1 B SER 469 ? B SER 172 76 1 Y 1 B LYS 470 ? B LYS 173 77 1 Y 1 B PRO 471 ? B PRO 174 78 1 Y 1 B SER 472 ? B SER 175 79 1 Y 1 B VAL 473 ? B VAL 176 80 1 Y 1 B ASP 474 ? B ASP 177 81 1 Y 1 B ILE 475 ? B ILE 178 82 1 Y 1 B PRO 476 ? B PRO 179 83 1 Y 1 B ASN 477 ? B ASN 180 84 1 Y 1 B LEU 478 ? B LEU 181 85 1 Y 1 B PRO 479 ? B PRO 182 86 1 Y 1 B ALA 480 ? B ALA 183 87 1 Y 1 B SER 481 ? B SER 184 88 1 Y 1 B THR 482 ? B THR 185 89 1 Y 1 B SER 483 ? B SER 186 90 1 Y 1 B SER 484 ? B SER 187 91 1 Y 1 B PHE 485 ? B PHE 188 92 1 Y 1 B ALA 486 ? B ALA 189 93 1 Y 1 B VAL 487 ? B VAL 190 94 1 Y 1 B SER 488 ? B SER 191 95 1 Y 1 B PRO 489 ? B PRO 192 96 1 Y 1 B ALA 490 ? B ALA 193 97 1 Y 1 B TYR 491 ? B TYR 194 98 1 Y 1 B SER 492 ? B SER 195 99 1 Y 1 B MET 493 ? B MET 196 100 1 Y 1 B THR 494 ? B THR 197 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 2 NAG 1 C NAG 1 A NAG 3381 n C 2 NAG 2 C NAG 2 A NAG 3382 n D 2 NAG 1 D NAG 1 B NAG 3381 n D 2 NAG 2 D NAG 2 B NAG 3382 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #