data_3HMH # _entry.id 3HMH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3HMH pdb_00003hmh 10.2210/pdb3hmh/pdb RCSB RCSB053314 ? ? WWPDB D_1000053314 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3HME . unspecified PDB 3HMF . unspecified # _pdbx_database_status.entry_id 3HMH _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2009-05-29 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Filippakopoulos, P.' 1 'Picaud, S.' 2 'Keates, T.' 3 'Zhang, Y.' 4 'Pike, A.C.W.' 5 'von Delft, F.' 6 'Arrowsmith, C.H.' 7 'Edwards, A.' 8 'Weigelt, J.' 9 'Bountra, C.' 10 'Knapp, S.' 11 'Structural Genomics Consortium (SGC)' 12 # _citation.id primary _citation.title 'Histone recognition and large-scale structural analysis of the human bromodomain family.' _citation.journal_abbrev 'Cell(Cambridge,Mass.)' _citation.journal_volume 149 _citation.page_first 214 _citation.page_last 231 _citation.year 2012 _citation.journal_id_ASTM CELLB5 _citation.country US _citation.journal_id_ISSN 0092-8674 _citation.journal_id_CSD 0998 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22464331 _citation.pdbx_database_id_DOI 10.1016/j.cell.2012.02.013 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Filippakopoulos, P.' 1 ? primary 'Picaud, S.' 2 ? primary 'Mangos, M.' 3 ? primary 'Keates, T.' 4 ? primary 'Lambert, J.P.' 5 ? primary 'Barsyte-Lovejoy, D.' 6 ? primary 'Felletar, I.' 7 ? primary 'Volkmer, R.' 8 ? primary 'Muller, S.' 9 ? primary 'Pawson, T.' 10 ? primary 'Gingras, A.C.' 11 ? primary 'Arrowsmith, C.H.' 12 ? primary 'Knapp, S.' 13 ? # _cell.length_a 55.139 _cell.length_b 55.139 _cell.length_c 84.441 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 3HMH _cell.pdbx_unique_axis ? _cell.Z_PDB 6 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.entry_id 3HMH _symmetry.Int_Tables_number 154 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Transcription initiation factor TFIID 210 kDa subunit' 18023.252 1 ? ? 'Bromodomain, UNP residues 1523-1651' ? 2 water nat water 18.015 68 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'TAF1L, TBP-associated factor 210 kDa, TAF(II)210, TBP-associated factor 1-like' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MHHHHHHSSGVDLGTENLYFQSMQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKMIVNPVDLETIRKNISKH KYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNICYQTITEYDEHLTQLEKDICTAKEAALEEAELESLD ; _entity_poly.pdbx_seq_one_letter_code_can ;MHHHHHHSSGVDLGTENLYFQSMQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKMIVNPVDLETIRKNISKH KYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNICYQTITEYDEHLTQLEKDICTAKEAALEEAELESLD ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 SER n 1 9 SER n 1 10 GLY n 1 11 VAL n 1 12 ASP n 1 13 LEU n 1 14 GLY n 1 15 THR n 1 16 GLU n 1 17 ASN n 1 18 LEU n 1 19 TYR n 1 20 PHE n 1 21 GLN n 1 22 SER n 1 23 MET n 1 24 GLN n 1 25 VAL n 1 26 ALA n 1 27 PHE n 1 28 SER n 1 29 PHE n 1 30 ILE n 1 31 LEU n 1 32 ASP n 1 33 ASN n 1 34 ILE n 1 35 VAL n 1 36 THR n 1 37 GLN n 1 38 LYS n 1 39 MET n 1 40 MET n 1 41 ALA n 1 42 VAL n 1 43 PRO n 1 44 ASP n 1 45 SER n 1 46 TRP n 1 47 PRO n 1 48 PHE n 1 49 HIS n 1 50 HIS n 1 51 PRO n 1 52 VAL n 1 53 ASN n 1 54 LYS n 1 55 LYS n 1 56 PHE n 1 57 VAL n 1 58 PRO n 1 59 ASP n 1 60 TYR n 1 61 TYR n 1 62 LYS n 1 63 MET n 1 64 ILE n 1 65 VAL n 1 66 ASN n 1 67 PRO n 1 68 VAL n 1 69 ASP n 1 70 LEU n 1 71 GLU n 1 72 THR n 1 73 ILE n 1 74 ARG n 1 75 LYS n 1 76 ASN n 1 77 ILE n 1 78 SER n 1 79 LYS n 1 80 HIS n 1 81 LYS n 1 82 TYR n 1 83 GLN n 1 84 SER n 1 85 ARG n 1 86 GLU n 1 87 SER n 1 88 PHE n 1 89 LEU n 1 90 ASP n 1 91 ASP n 1 92 VAL n 1 93 ASN n 1 94 LEU n 1 95 ILE n 1 96 LEU n 1 97 ALA n 1 98 ASN n 1 99 SER n 1 100 VAL n 1 101 LYS n 1 102 TYR n 1 103 ASN n 1 104 GLY n 1 105 PRO n 1 106 GLU n 1 107 SER n 1 108 GLN n 1 109 TYR n 1 110 THR n 1 111 LYS n 1 112 THR n 1 113 ALA n 1 114 GLN n 1 115 GLU n 1 116 ILE n 1 117 VAL n 1 118 ASN n 1 119 ILE n 1 120 CYS n 1 121 TYR n 1 122 GLN n 1 123 THR n 1 124 ILE n 1 125 THR n 1 126 GLU n 1 127 TYR n 1 128 ASP n 1 129 GLU n 1 130 HIS n 1 131 LEU n 1 132 THR n 1 133 GLN n 1 134 LEU n 1 135 GLU n 1 136 LYS n 1 137 ASP n 1 138 ILE n 1 139 CYS n 1 140 THR n 1 141 ALA n 1 142 LYS n 1 143 GLU n 1 144 ALA n 1 145 ALA n 1 146 LEU n 1 147 GLU n 1 148 GLU n 1 149 ALA n 1 150 GLU n 1 151 LEU n 1 152 GLU n 1 153 SER n 1 154 LEU n 1 155 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene TAF1L _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)-R3' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pNIC28-Bsa4 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TAF1L_HUMAN _struct_ref.pdbx_db_accession Q8IZX4 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKMIVNPVDLETIRKNISKHKYQSRESFLDDVNLILANSVKYN GPESQYTKTAQEIVNICYQTITEYDEHLTQLEKDICTAKEAALEEAELESLD ; _struct_ref.pdbx_align_begin 1523 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3HMH _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 24 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 155 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8IZX4 _struct_ref_seq.db_align_beg 1523 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1654 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1523 _struct_ref_seq.pdbx_auth_seq_align_end 1654 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3HMH MET A 1 ? UNP Q8IZX4 ? ? 'expression tag' 1500 1 1 3HMH HIS A 2 ? UNP Q8IZX4 ? ? 'expression tag' 1501 2 1 3HMH HIS A 3 ? UNP Q8IZX4 ? ? 'expression tag' 1502 3 1 3HMH HIS A 4 ? UNP Q8IZX4 ? ? 'expression tag' 1503 4 1 3HMH HIS A 5 ? UNP Q8IZX4 ? ? 'expression tag' 1504 5 1 3HMH HIS A 6 ? UNP Q8IZX4 ? ? 'expression tag' 1505 6 1 3HMH HIS A 7 ? UNP Q8IZX4 ? ? 'expression tag' 1506 7 1 3HMH SER A 8 ? UNP Q8IZX4 ? ? 'expression tag' 1507 8 1 3HMH SER A 9 ? UNP Q8IZX4 ? ? 'expression tag' 1508 9 1 3HMH GLY A 10 ? UNP Q8IZX4 ? ? 'expression tag' 1509 10 1 3HMH VAL A 11 ? UNP Q8IZX4 ? ? 'expression tag' 1510 11 1 3HMH ASP A 12 ? UNP Q8IZX4 ? ? 'expression tag' 1511 12 1 3HMH LEU A 13 ? UNP Q8IZX4 ? ? 'expression tag' 1512 13 1 3HMH GLY A 14 ? UNP Q8IZX4 ? ? 'expression tag' 1513 14 1 3HMH THR A 15 ? UNP Q8IZX4 ? ? 'expression tag' 1514 15 1 3HMH GLU A 16 ? UNP Q8IZX4 ? ? 'expression tag' 1515 16 1 3HMH ASN A 17 ? UNP Q8IZX4 ? ? 'expression tag' 1516 17 1 3HMH LEU A 18 ? UNP Q8IZX4 ? ? 'expression tag' 1517 18 1 3HMH TYR A 19 ? UNP Q8IZX4 ? ? 'expression tag' 1518 19 1 3HMH PHE A 20 ? UNP Q8IZX4 ? ? 'expression tag' 1519 20 1 3HMH GLN A 21 ? UNP Q8IZX4 ? ? 'expression tag' 1520 21 1 3HMH SER A 22 ? UNP Q8IZX4 ? ? 'expression tag' 1521 22 1 3HMH MET A 23 ? UNP Q8IZX4 ? ? 'expression tag' 1522 23 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3HMH _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity 0.780 _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.06 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 40.17 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '15w/v PEG_3350, 0.17M ammonium_sulfate, 15w/v glycerol, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2009-03-21 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU FR-E SUPERBRIGHT' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5 _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 3HMH _reflns.d_resolution_high 2.050 _reflns.d_resolution_low 28.150 _reflns.number_all 9764 _reflns.number_obs 9764 _reflns.pdbx_Rsym_value 0.075 _reflns.pdbx_redundancy 6.800 _reflns.percent_possible_obs 100.000 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.pdbx_Rmerge_I_obs 0.075 _reflns.pdbx_netI_over_sigmaI 15.6 _reflns.B_iso_Wilson_estimate 33.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.05 _reflns_shell.d_res_low 2.16 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.687 _reflns_shell.meanI_over_sigI_obs 2.7 _reflns_shell.pdbx_Rsym_value 0.687 _reflns_shell.pdbx_redundancy 6.8 _reflns_shell.number_unique_all 1392 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3HMH _refine.ls_d_res_high 2.050 _refine.ls_d_res_low 28.150 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.970 _refine.ls_number_reflns_obs 9738 _refine.ls_number_reflns_all 9741 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES: RESIDUAL ONLY' _refine.ls_R_factor_all 0.185 _refine.ls_R_factor_obs 0.185 _refine.ls_R_factor_R_work 0.181 _refine.ls_wR_factor_R_work 0.169 _refine.ls_R_factor_R_free 0.252 _refine.ls_wR_factor_R_free 0.236 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 496 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 18.147 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.800 _refine.aniso_B[2][2] 0.800 _refine.aniso_B[3][3] -1.190 _refine.aniso_B[1][2] 0.400 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.961 _refine.correlation_coeff_Fo_to_Fc_free 0.926 _refine.overall_SU_R_Cruickshank_DPI 0.199 _refine.overall_SU_R_free 0.191 _refine.pdbx_overall_ESU_R 0.199 _refine.pdbx_overall_ESU_R_Free 0.191 _refine.overall_SU_ML 0.135 _refine.overall_SU_B 11.214 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model '2NXB, 2OO1, 2OSS, 2OUO, 2RFJ, 3DAI, 3D7C, 3DWY' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.838 _refine.B_iso_max 61.38 _refine.B_iso_min 2.00 _refine.occupancy_max 1.00 _refine.occupancy_min 0.20 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1132 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 68 _refine_hist.number_atoms_total 1200 _refine_hist.d_res_high 2.050 _refine_hist.d_res_low 28.150 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1167 0.016 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 764 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1585 1.385 1.949 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 1888 0.948 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 138 4.832 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 60 43.201 26.167 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 209 14.478 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 2 17.848 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 179 0.091 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1278 0.006 0.021 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 215 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 701 3.766 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 273 1.267 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1151 5.225 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 466 9.136 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 434 11.335 11.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.050 _refine_ls_shell.d_res_low 2.103 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 100.000 _refine_ls_shell.number_reflns_R_work 661 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.281 _refine_ls_shell.R_factor_R_free 0.371 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 42 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 703 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3HMH _struct.title 'Crystal structure of the second bromodomain of human TBP-associated factor RNA polymerase 1-like (TAF1L)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3HMH _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text ;MGC134910, TAF2A2, Structural Genomics Consortium, SGC, Bromodomain, Cell cycle, Disulfide bond, DNA-binding, Nucleus, Transcription, Transcription regulation ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 14 ? LYS A 38 ? GLY A 1513 LYS A 1537 1 ? 25 HELX_P HELX_P2 2 SER A 45 ? HIS A 49 ? SER A 1544 HIS A 1548 5 ? 5 HELX_P HELX_P3 3 VAL A 57 ? ILE A 64 ? VAL A 1556 ILE A 1563 1 ? 8 HELX_P HELX_P4 4 ASP A 69 ? LYS A 79 ? ASP A 1568 LYS A 1578 1 ? 11 HELX_P HELX_P5 5 SER A 84 ? GLY A 104 ? SER A 1583 GLY A 1603 1 ? 21 HELX_P HELX_P6 6 SER A 107 ? TYR A 127 ? SER A 1606 TYR A 1626 1 ? 21 HELX_P HELX_P7 7 TYR A 127 ? LEU A 151 ? TYR A 1626 LEU A 1650 1 ? 25 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _atom_sites.entry_id 3HMH _atom_sites.fract_transf_matrix[1][1] 0.018136 _atom_sites.fract_transf_matrix[1][2] 0.010471 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020941 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011843 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1500 ? ? ? A . n A 1 2 HIS 2 1501 ? ? ? A . n A 1 3 HIS 3 1502 ? ? ? A . n A 1 4 HIS 4 1503 ? ? ? A . n A 1 5 HIS 5 1504 ? ? ? A . n A 1 6 HIS 6 1505 ? ? ? A . n A 1 7 HIS 7 1506 ? ? ? A . n A 1 8 SER 8 1507 ? ? ? A . n A 1 9 SER 9 1508 ? ? ? A . n A 1 10 GLY 10 1509 ? ? ? A . n A 1 11 VAL 11 1510 ? ? ? A . n A 1 12 ASP 12 1511 ? ? ? A . n A 1 13 LEU 13 1512 ? ? ? A . n A 1 14 GLY 14 1513 1513 GLY GLY A . n A 1 15 THR 15 1514 1514 THR THR A . n A 1 16 GLU 16 1515 1515 GLU GLU A . n A 1 17 ASN 17 1516 1516 ASN ASN A . n A 1 18 LEU 18 1517 1517 LEU LEU A . n A 1 19 TYR 19 1518 1518 TYR TYR A . n A 1 20 PHE 20 1519 1519 PHE PHE A . n A 1 21 GLN 21 1520 1520 GLN GLN A . n A 1 22 SER 22 1521 1521 SER SER A . n A 1 23 MET 23 1522 1522 MET MET A . n A 1 24 GLN 24 1523 1523 GLN GLN A . n A 1 25 VAL 25 1524 1524 VAL VAL A . n A 1 26 ALA 26 1525 1525 ALA ALA A . n A 1 27 PHE 27 1526 1526 PHE PHE A . n A 1 28 SER 28 1527 1527 SER SER A . n A 1 29 PHE 29 1528 1528 PHE PHE A . n A 1 30 ILE 30 1529 1529 ILE ILE A . n A 1 31 LEU 31 1530 1530 LEU LEU A . n A 1 32 ASP 32 1531 1531 ASP ASP A . n A 1 33 ASN 33 1532 1532 ASN ASN A . n A 1 34 ILE 34 1533 1533 ILE ILE A . n A 1 35 VAL 35 1534 1534 VAL VAL A . n A 1 36 THR 36 1535 1535 THR THR A . n A 1 37 GLN 37 1536 1536 GLN GLN A . n A 1 38 LYS 38 1537 1537 LYS LYS A . n A 1 39 MET 39 1538 1538 MET MET A . n A 1 40 MET 40 1539 1539 MET MET A . n A 1 41 ALA 41 1540 1540 ALA ALA A . n A 1 42 VAL 42 1541 1541 VAL VAL A . n A 1 43 PRO 43 1542 1542 PRO PRO A . n A 1 44 ASP 44 1543 1543 ASP ASP A . n A 1 45 SER 45 1544 1544 SER SER A . n A 1 46 TRP 46 1545 1545 TRP TRP A . n A 1 47 PRO 47 1546 1546 PRO PRO A . n A 1 48 PHE 48 1547 1547 PHE PHE A . n A 1 49 HIS 49 1548 1548 HIS HIS A . n A 1 50 HIS 50 1549 1549 HIS HIS A . n A 1 51 PRO 51 1550 1550 PRO PRO A . n A 1 52 VAL 52 1551 1551 VAL VAL A . n A 1 53 ASN 53 1552 1552 ASN ASN A . n A 1 54 LYS 54 1553 1553 LYS LYS A . n A 1 55 LYS 55 1554 1554 LYS LYS A . n A 1 56 PHE 56 1555 1555 PHE PHE A . n A 1 57 VAL 57 1556 1556 VAL VAL A . n A 1 58 PRO 58 1557 1557 PRO PRO A . n A 1 59 ASP 59 1558 1558 ASP ASP A . n A 1 60 TYR 60 1559 1559 TYR TYR A . n A 1 61 TYR 61 1560 1560 TYR TYR A . n A 1 62 LYS 62 1561 1561 LYS LYS A . n A 1 63 MET 63 1562 1562 MET MET A . n A 1 64 ILE 64 1563 1563 ILE ILE A . n A 1 65 VAL 65 1564 1564 VAL VAL A . n A 1 66 ASN 66 1565 1565 ASN ASN A . n A 1 67 PRO 67 1566 1566 PRO PRO A . n A 1 68 VAL 68 1567 1567 VAL VAL A . n A 1 69 ASP 69 1568 1568 ASP ASP A . n A 1 70 LEU 70 1569 1569 LEU LEU A . n A 1 71 GLU 71 1570 1570 GLU GLU A . n A 1 72 THR 72 1571 1571 THR THR A . n A 1 73 ILE 73 1572 1572 ILE ILE A . n A 1 74 ARG 74 1573 1573 ARG ARG A . n A 1 75 LYS 75 1574 1574 LYS LYS A . n A 1 76 ASN 76 1575 1575 ASN ASN A . n A 1 77 ILE 77 1576 1576 ILE ILE A . n A 1 78 SER 78 1577 1577 SER SER A . n A 1 79 LYS 79 1578 1578 LYS LYS A . n A 1 80 HIS 80 1579 1579 HIS HIS A . n A 1 81 LYS 81 1580 1580 LYS LYS A . n A 1 82 TYR 82 1581 1581 TYR TYR A . n A 1 83 GLN 83 1582 1582 GLN GLN A . n A 1 84 SER 84 1583 1583 SER SER A . n A 1 85 ARG 85 1584 1584 ARG ARG A . n A 1 86 GLU 86 1585 1585 GLU GLU A . n A 1 87 SER 87 1586 1586 SER SER A . n A 1 88 PHE 88 1587 1587 PHE PHE A . n A 1 89 LEU 89 1588 1588 LEU LEU A . n A 1 90 ASP 90 1589 1589 ASP ASP A . n A 1 91 ASP 91 1590 1590 ASP ASP A . n A 1 92 VAL 92 1591 1591 VAL VAL A . n A 1 93 ASN 93 1592 1592 ASN ASN A . n A 1 94 LEU 94 1593 1593 LEU LEU A . n A 1 95 ILE 95 1594 1594 ILE ILE A . n A 1 96 LEU 96 1595 1595 LEU LEU A . n A 1 97 ALA 97 1596 1596 ALA ALA A . n A 1 98 ASN 98 1597 1597 ASN ASN A . n A 1 99 SER 99 1598 1598 SER SER A . n A 1 100 VAL 100 1599 1599 VAL VAL A . n A 1 101 LYS 101 1600 1600 LYS LYS A . n A 1 102 TYR 102 1601 1601 TYR TYR A . n A 1 103 ASN 103 1602 1602 ASN ASN A . n A 1 104 GLY 104 1603 1603 GLY GLY A . n A 1 105 PRO 105 1604 1604 PRO PRO A . n A 1 106 GLU 106 1605 1605 GLU GLU A . n A 1 107 SER 107 1606 1606 SER SER A . n A 1 108 GLN 108 1607 1607 GLN GLN A . n A 1 109 TYR 109 1608 1608 TYR TYR A . n A 1 110 THR 110 1609 1609 THR THR A . n A 1 111 LYS 111 1610 1610 LYS LYS A . n A 1 112 THR 112 1611 1611 THR THR A . n A 1 113 ALA 113 1612 1612 ALA ALA A . n A 1 114 GLN 114 1613 1613 GLN GLN A . n A 1 115 GLU 115 1614 1614 GLU GLU A . n A 1 116 ILE 116 1615 1615 ILE ILE A . n A 1 117 VAL 117 1616 1616 VAL VAL A . n A 1 118 ASN 118 1617 1617 ASN ASN A . n A 1 119 ILE 119 1618 1618 ILE ILE A . n A 1 120 CYS 120 1619 1619 CYS CYS A . n A 1 121 TYR 121 1620 1620 TYR TYR A . n A 1 122 GLN 122 1621 1621 GLN GLN A . n A 1 123 THR 123 1622 1622 THR THR A . n A 1 124 ILE 124 1623 1623 ILE ILE A . n A 1 125 THR 125 1624 1624 THR THR A . n A 1 126 GLU 126 1625 1625 GLU GLU A . n A 1 127 TYR 127 1626 1626 TYR TYR A . n A 1 128 ASP 128 1627 1627 ASP ASP A . n A 1 129 GLU 129 1628 1628 GLU GLU A . n A 1 130 HIS 130 1629 1629 HIS HIS A . n A 1 131 LEU 131 1630 1630 LEU LEU A . n A 1 132 THR 132 1631 1631 THR THR A . n A 1 133 GLN 133 1632 1632 GLN GLN A . n A 1 134 LEU 134 1633 1633 LEU LEU A . n A 1 135 GLU 135 1634 1634 GLU GLU A . n A 1 136 LYS 136 1635 1635 LYS LYS A . n A 1 137 ASP 137 1636 1636 ASP ASP A . n A 1 138 ILE 138 1637 1637 ILE ILE A . n A 1 139 CYS 139 1638 1638 CYS CYS A . n A 1 140 THR 140 1639 1639 THR THR A . n A 1 141 ALA 141 1640 1640 ALA ALA A . n A 1 142 LYS 142 1641 1641 LYS LYS A . n A 1 143 GLU 143 1642 1642 GLU GLU A . n A 1 144 ALA 144 1643 1643 ALA ALA A . n A 1 145 ALA 145 1644 1644 ALA ALA A . n A 1 146 LEU 146 1645 1645 LEU LEU A . n A 1 147 GLU 147 1646 1646 GLU GLU A . n A 1 148 GLU 148 1647 1647 GLU GLU A . n A 1 149 ALA 149 1648 1648 ALA ALA A . n A 1 150 GLU 150 1649 1649 GLU GLU A . n A 1 151 LEU 151 1650 1650 LEU LEU A . n A 1 152 GLU 152 1651 1651 GLU GLU A . n A 1 153 SER 153 1652 ? ? ? A . n A 1 154 LEU 154 1653 ? ? ? A . n A 1 155 ASP 155 1654 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 1 1 HOH HOH A . B 2 HOH 2 2 2 HOH HOH A . B 2 HOH 3 3 3 HOH HOH A . B 2 HOH 4 4 4 HOH HOH A . B 2 HOH 5 5 5 HOH HOH A . B 2 HOH 6 6 6 HOH HOH A . B 2 HOH 7 7 7 HOH HOH A . B 2 HOH 8 8 8 HOH HOH A . B 2 HOH 9 9 9 HOH HOH A . B 2 HOH 10 11 11 HOH HOH A . B 2 HOH 11 12 12 HOH HOH A . B 2 HOH 12 13 13 HOH HOH A . B 2 HOH 13 14 14 HOH HOH A . B 2 HOH 14 15 15 HOH HOH A . B 2 HOH 15 16 16 HOH HOH A . B 2 HOH 16 17 17 HOH HOH A . B 2 HOH 17 19 19 HOH HOH A . B 2 HOH 18 20 20 HOH HOH A . B 2 HOH 19 21 21 HOH HOH A . B 2 HOH 20 22 22 HOH HOH A . B 2 HOH 21 23 23 HOH HOH A . B 2 HOH 22 24 24 HOH HOH A . B 2 HOH 23 25 25 HOH HOH A . B 2 HOH 24 26 26 HOH HOH A . B 2 HOH 25 27 27 HOH HOH A . B 2 HOH 26 28 28 HOH HOH A . B 2 HOH 27 29 29 HOH HOH A . B 2 HOH 28 30 30 HOH HOH A . B 2 HOH 29 31 31 HOH HOH A . B 2 HOH 30 32 32 HOH HOH A . B 2 HOH 31 33 33 HOH HOH A . B 2 HOH 32 34 34 HOH HOH A . B 2 HOH 33 35 35 HOH HOH A . B 2 HOH 34 36 36 HOH HOH A . B 2 HOH 35 37 37 HOH HOH A . B 2 HOH 36 38 38 HOH HOH A . B 2 HOH 37 39 39 HOH HOH A . B 2 HOH 38 41 41 HOH HOH A . B 2 HOH 39 42 42 HOH HOH A . B 2 HOH 40 43 43 HOH HOH A . B 2 HOH 41 45 45 HOH HOH A . B 2 HOH 42 46 46 HOH HOH A . B 2 HOH 43 47 47 HOH HOH A . B 2 HOH 44 48 48 HOH HOH A . B 2 HOH 45 49 49 HOH HOH A . B 2 HOH 46 50 50 HOH HOH A . B 2 HOH 47 51 51 HOH HOH A . B 2 HOH 48 52 52 HOH HOH A . B 2 HOH 49 54 54 HOH HOH A . B 2 HOH 50 55 55 HOH HOH A . B 2 HOH 51 56 56 HOH HOH A . B 2 HOH 52 57 57 HOH HOH A . B 2 HOH 53 58 58 HOH HOH A . B 2 HOH 54 59 59 HOH HOH A . B 2 HOH 55 61 61 HOH HOH A . B 2 HOH 56 62 62 HOH HOH A . B 2 HOH 57 63 63 HOH HOH A . B 2 HOH 58 64 64 HOH HOH A . B 2 HOH 59 65 65 HOH HOH A . B 2 HOH 60 66 66 HOH HOH A . B 2 HOH 61 67 67 HOH HOH A . B 2 HOH 62 68 68 HOH HOH A . B 2 HOH 63 69 69 HOH HOH A . B 2 HOH 64 70 70 HOH HOH A . B 2 HOH 65 71 71 HOH HOH A . B 2 HOH 66 72 72 HOH HOH A . B 2 HOH 67 73 73 HOH HOH A . B 2 HOH 68 74 74 HOH HOH A . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B 2 1,2 A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 2320 ? 2 MORE -14 ? 2 'SSA (A^2)' 14600 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 5_555 x-y,-y,-z+1/3 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 28.1470000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 22 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id B _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-06-23 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-04-11 4 'Structure model' 1 3 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Database references' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 39.3378 14.7976 13.6242 0.1138 0.0655 0.1416 -0.0308 -0.0091 -0.0252 1.9327 1.7728 5.6803 -1.7690 2.5663 -2.1068 0.1184 0.0402 -0.1586 -0.0234 -0.1317 0.1773 -0.1216 0.0634 -0.1309 'X-RAY DIFFRACTION' 2 ? refined 44.3730 8.2145 11.0857 0.1835 0.0963 0.1596 0.0255 -0.0202 -0.0685 1.1090 2.1017 3.5012 -0.4197 0.4420 -1.4101 0.1092 -0.1534 0.0442 0.1934 -0.0278 -0.0637 -0.1641 0.2888 0.3752 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1513 ? 1 1 A A 1588 . . . . ? 'X-RAY DIFFRACTION' 1589 ? 2 2 A A 1651 . . . . ? # _pdbx_phasing_MR.entry_id 3HMH _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor 56.990 _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.500 _pdbx_phasing_MR.d_res_low_rotation 28.150 _pdbx_phasing_MR.d_res_high_translation 2.500 _pdbx_phasing_MR.d_res_low_translation 28.150 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 SCALA 3.3.9 2008/10/21 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 2 PHASER 2.1.4 'Thu Nov 13 10:53:32 2008' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 CrystalClear . ? ? ? ? 'data collection' ? ? ? 6 MOSFLM . ? ? ? ? 'data reduction' ? ? ? # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 1554 ? CE ? A LYS 55 CE 2 1 Y 1 A LYS 1554 ? NZ ? A LYS 55 NZ 3 1 Y 1 A LYS 1635 ? CD ? A LYS 136 CD 4 1 Y 1 A LYS 1635 ? CE ? A LYS 136 CE 5 1 Y 1 A LYS 1635 ? NZ ? A LYS 136 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1500 ? A MET 1 2 1 Y 1 A HIS 1501 ? A HIS 2 3 1 Y 1 A HIS 1502 ? A HIS 3 4 1 Y 1 A HIS 1503 ? A HIS 4 5 1 Y 1 A HIS 1504 ? A HIS 5 6 1 Y 1 A HIS 1505 ? A HIS 6 7 1 Y 1 A HIS 1506 ? A HIS 7 8 1 Y 1 A SER 1507 ? A SER 8 9 1 Y 1 A SER 1508 ? A SER 9 10 1 Y 1 A GLY 1509 ? A GLY 10 11 1 Y 1 A VAL 1510 ? A VAL 11 12 1 Y 1 A ASP 1511 ? A ASP 12 13 1 Y 1 A LEU 1512 ? A LEU 13 14 1 Y 1 A SER 1652 ? A SER 153 15 1 Y 1 A LEU 1653 ? A LEU 154 16 1 Y 1 A ASP 1654 ? A ASP 155 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.details 1 ? 'experimental model' PDB 2NXB '2NXB, 2OO1, 2OSS, 2OUO, 2RFJ, 3DAI, 3D7C, 3DWY' 2 ? 'experimental model' PDB 2OO1 '2NXB, 2OO1, 2OSS, 2OUO, 2RFJ, 3DAI, 3D7C, 3DWY' 3 ? 'experimental model' PDB 2OSS '2NXB, 2OO1, 2OSS, 2OUO, 2RFJ, 3DAI, 3D7C, 3DWY' 4 ? 'experimental model' PDB 2OUO '2NXB, 2OO1, 2OSS, 2OUO, 2RFJ, 3DAI, 3D7C, 3DWY' 5 ? 'experimental model' PDB 2RFJ '2NXB, 2OO1, 2OSS, 2OUO, 2RFJ, 3DAI, 3D7C, 3DWY' 6 ? 'experimental model' PDB 3DAI '2NXB, 2OO1, 2OSS, 2OUO, 2RFJ, 3DAI, 3D7C, 3DWY' 7 ? 'experimental model' PDB 3D7C '2NXB, 2OO1, 2OSS, 2OUO, 2RFJ, 3DAI, 3D7C, 3DWY' 8 ? 'experimental model' PDB 3DWY '2NXB, 2OO1, 2OSS, 2OUO, 2RFJ, 3DAI, 3D7C, 3DWY' #