HEADER TRANSFERASE 29-MAY-09 3HMU TITLE CRYSTAL STRUCTURE OF A CLASS III AMINOTRANSFERASE FROM SILICIBACTER TITLE 2 POMEROYI COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMINOTRANSFERASE, CLASS III; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SILICIBACTER POMEROYI; SOURCE 3 ORGANISM_TAXID: 89184; SOURCE 4 GENE: SPO3471; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PET; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: MODIFIED PET26 KEYWDS STRUCTURAL GENOMICS, TRANSFERASE, AMINOTRANSFERASE, PYRIDOXAL KEYWDS 2 PHOSPHATE, PSI-2, PROTEIN STRUCTURE INITIATIVE, NEW YORK SGX KEYWDS 3 RESEARCH CENTER FOR STRUCTURAL GENOMICS, NYSGXRC EXPDTA X-RAY DIFFRACTION AUTHOR R.TORO,J.B.BONANNO,U.RAMAGOPAL,J.FREEMAN,K.T.BAIN,S.MILLER, AUTHOR 2 J.M.SAUDER,S.K.BURLEY,S.C.ALMO,NEW YORK SGX RESEARCH CENTER FOR AUTHOR 3 STRUCTURAL GENOMICS (NYSGXRC) REVDAT 6 21-FEB-24 3HMU 1 REMARK REVDAT 5 10-FEB-21 3HMU 1 AUTHOR JRNL REMARK SEQADV REVDAT 4 28-NOV-18 3HMU 1 SOURCE REVDAT 3 21-NOV-18 3HMU 1 AUTHOR REVDAT 2 01-NOV-17 3HMU 1 REMARK REVDAT 1 14-JUL-09 3HMU 0 JRNL AUTH R.TORO,J.B.BONANNO,U.RAMAGOPAL,J.FREEMAN,K.T.BAIN,S.MILLER, JRNL AUTH 2 J.M.SAUDER,S.K.BURLEY,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF A CLASS III AMINOTRANSFERASE FROM JRNL TITL 2 SILICIBACTER POMEROYI JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 56166 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.152 REMARK 3 R VALUE (WORKING SET) : 0.150 REMARK 3 FREE R VALUE : 0.193 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2840 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3777 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.1700 REMARK 3 BIN FREE R VALUE SET COUNT : 199 REMARK 3 BIN FREE R VALUE : 0.2210 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7104 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 12 REMARK 3 SOLVENT ATOMS : 666 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.12000 REMARK 3 B22 (A**2) : -0.14000 REMARK 3 B33 (A**2) : 0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.190 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.158 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.099 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.701 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7271 ; 0.016 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9868 ; 1.523 ; 1.945 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 922 ; 6.308 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 337 ;34.388 ;24.154 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1183 ;13.504 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 48 ;20.663 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1075 ; 0.102 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5600 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4577 ; 0.697 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7321 ; 1.301 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2694 ; 2.671 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2547 ; 4.216 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3HMU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JUN-09. REMARK 100 THE DEPOSITION ID IS D_1000053327. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-MAY-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97958 REMARK 200 MONOCHROMATOR : SILICON REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56398 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 8.000 REMARK 200 R MERGE (I) : 0.13400 REMARK 200 R SYM (I) : 0.13400 REMARK 200 FOR THE DATA SET : 9.8840 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.5 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : 0.31000 REMARK 200 R SYM FOR SHELL (I) : 0.31000 REMARK 200 FOR SHELL : 2.740 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM SODIUM CACODYLATE PH 6.5, 30% REMARK 280 PEG 8K, 200MM AMMONIUM SULFATE, VAPOR DIFFUSION, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.12300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.49250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 56.80250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 65.49250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.12300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 56.80250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28400 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -119.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -1 REMARK 465 SER A 0 REMARK 465 LEU A 1 REMARK 465 ALA A 2 REMARK 465 THR A 3 REMARK 465 HIS A 468 REMARK 465 HIS A 469 REMARK 465 HIS A 470 REMARK 465 MET B -1 REMARK 465 SER B 0 REMARK 465 LEU B 1 REMARK 465 ALA B 2 REMARK 465 THR B 3 REMARK 465 GLY B 464 REMARK 465 HIS B 465 REMARK 465 HIS B 466 REMARK 465 HIS B 467 REMARK 465 HIS B 468 REMARK 465 HIS B 469 REMARK 465 HIS B 470 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 7 CG ND1 CD2 CE1 NE2 REMARK 470 HIS B 7 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 616 O HOH A 746 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 83 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 MET B 460 CG - SD - CE ANGL. DEV. = -9.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 92 37.55 -93.68 REMARK 500 SER A 151 -158.57 -139.49 REMARK 500 GLN A 175 66.09 -103.79 REMARK 500 VAL A 236 75.30 41.94 REMARK 500 ALA A 289 -148.04 -174.29 REMARK 500 LYS A 290 -102.63 43.60 REMARK 500 HIS A 326 122.28 -34.10 REMARK 500 VAL A 352 -67.76 -120.68 REMARK 500 SER A 426 64.83 -159.49 REMARK 500 PHE B 25 53.92 36.90 REMARK 500 PHE B 92 44.14 -98.02 REMARK 500 SER B 151 -156.90 -140.49 REMARK 500 GLN B 175 67.26 -111.44 REMARK 500 ALA B 289 -149.66 -174.51 REMARK 500 LYS B 290 -100.39 42.96 REMARK 500 SER B 294 26.89 49.37 REMARK 500 HIS B 326 121.77 -38.67 REMARK 500 SER B 426 65.61 -164.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 471 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 472 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 471 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 472 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-11247M RELATED DB: TARGETDB DBREF 3HMU A 2 462 UNP Q5LMU1 Q5LMU1_SILPO 2 462 DBREF 3HMU B 2 462 UNP Q5LMU1 Q5LMU1_SILPO 2 462 SEQADV 3HMU MET A -1 UNP Q5LMU1 EXPRESSION TAG SEQADV 3HMU SER A 0 UNP Q5LMU1 EXPRESSION TAG SEQADV 3HMU LEU A 1 UNP Q5LMU1 EXPRESSION TAG SEQADV 3HMU GLU A 463 UNP Q5LMU1 EXPRESSION TAG SEQADV 3HMU GLY A 464 UNP Q5LMU1 EXPRESSION TAG SEQADV 3HMU HIS A 465 UNP Q5LMU1 EXPRESSION TAG SEQADV 3HMU HIS A 466 UNP Q5LMU1 EXPRESSION TAG SEQADV 3HMU HIS A 467 UNP Q5LMU1 EXPRESSION TAG SEQADV 3HMU HIS A 468 UNP Q5LMU1 EXPRESSION TAG SEQADV 3HMU HIS A 469 UNP Q5LMU1 EXPRESSION TAG SEQADV 3HMU HIS A 470 UNP Q5LMU1 EXPRESSION TAG SEQADV 3HMU MET B -1 UNP Q5LMU1 EXPRESSION TAG SEQADV 3HMU SER B 0 UNP Q5LMU1 EXPRESSION TAG SEQADV 3HMU LEU B 1 UNP Q5LMU1 EXPRESSION TAG SEQADV 3HMU GLU B 463 UNP Q5LMU1 EXPRESSION TAG SEQADV 3HMU GLY B 464 UNP Q5LMU1 EXPRESSION TAG SEQADV 3HMU HIS B 465 UNP Q5LMU1 EXPRESSION TAG SEQADV 3HMU HIS B 466 UNP Q5LMU1 EXPRESSION TAG SEQADV 3HMU HIS B 467 UNP Q5LMU1 EXPRESSION TAG SEQADV 3HMU HIS B 468 UNP Q5LMU1 EXPRESSION TAG SEQADV 3HMU HIS B 469 UNP Q5LMU1 EXPRESSION TAG SEQADV 3HMU HIS B 470 UNP Q5LMU1 EXPRESSION TAG SEQRES 1 A 472 MET SER LEU ALA THR ILE THR ASN HIS MET PRO THR ALA SEQRES 2 A 472 GLU LEU GLN ALA LEU ASP ALA ALA HIS HIS LEU HIS PRO SEQRES 3 A 472 PHE SER ALA ASN ASN ALA LEU GLY GLU GLU GLY THR ARG SEQRES 4 A 472 VAL ILE THR ARG ALA ARG GLY VAL TRP LEU ASN ASP SER SEQRES 5 A 472 GLU GLY GLU GLU ILE LEU ASP ALA MET ALA GLY LEU TRP SEQRES 6 A 472 CYS VAL ASN ILE GLY TYR GLY ARG ASP GLU LEU ALA GLU SEQRES 7 A 472 VAL ALA ALA ARG GLN MET ARG GLU LEU PRO TYR TYR ASN SEQRES 8 A 472 THR PHE PHE LYS THR THR HIS VAL PRO ALA ILE ALA LEU SEQRES 9 A 472 ALA GLN LYS LEU ALA GLU LEU ALA PRO GLY ASP LEU ASN SEQRES 10 A 472 HIS VAL PHE PHE ALA GLY GLY GLY SER GLU ALA ASN ASP SEQRES 11 A 472 THR ASN ILE ARG MET VAL ARG THR TYR TRP GLN ASN LYS SEQRES 12 A 472 GLY GLN PRO GLU LYS THR VAL ILE ILE SER ARG LYS ASN SEQRES 13 A 472 ALA TYR HIS GLY SER THR VAL ALA SER SER ALA LEU GLY SEQRES 14 A 472 GLY MET ALA GLY MET HIS ALA GLN SER GLY LEU ILE PRO SEQRES 15 A 472 ASP VAL HIS HIS ILE ASN GLN PRO ASN TRP TRP ALA GLU SEQRES 16 A 472 GLY GLY ASP MET ASP PRO GLU GLU PHE GLY LEU ALA ARG SEQRES 17 A 472 ALA ARG GLU LEU GLU GLU ALA ILE LEU GLU LEU GLY GLU SEQRES 18 A 472 ASN ARG VAL ALA ALA PHE ILE ALA GLU PRO VAL GLN GLY SEQRES 19 A 472 ALA GLY GLY VAL ILE VAL ALA PRO ASP SER TYR TRP PRO SEQRES 20 A 472 GLU ILE GLN ARG ILE CYS ASP LYS TYR ASP ILE LEU LEU SEQRES 21 A 472 ILE ALA ASP GLU VAL ILE CYS GLY PHE GLY ARG THR GLY SEQRES 22 A 472 ASN TRP PHE GLY THR GLN THR MET GLY ILE ARG PRO HIS SEQRES 23 A 472 ILE MET THR ILE ALA LYS GLY LEU SER SER GLY TYR ALA SEQRES 24 A 472 PRO ILE GLY GLY SER ILE VAL CYS ASP GLU VAL ALA HIS SEQRES 25 A 472 VAL ILE GLY LYS ASP GLU PHE ASN HIS GLY TYR THR TYR SEQRES 26 A 472 SER GLY HIS PRO VAL ALA ALA ALA VAL ALA LEU GLU ASN SEQRES 27 A 472 LEU ARG ILE LEU GLU GLU GLU ASN ILE LEU ASP HIS VAL SEQRES 28 A 472 ARG ASN VAL ALA ALA PRO TYR LEU LYS GLU LYS TRP GLU SEQRES 29 A 472 ALA LEU THR ASP HIS PRO LEU VAL GLY GLU ALA LYS ILE SEQRES 30 A 472 VAL GLY MET MET ALA SER ILE ALA LEU THR PRO ASN LYS SEQRES 31 A 472 ALA SER ARG ALA LYS PHE ALA SER GLU PRO GLY THR ILE SEQRES 32 A 472 GLY TYR ILE CYS ARG GLU ARG CYS PHE ALA ASN ASN LEU SEQRES 33 A 472 ILE MET ARG HIS VAL GLY ASP ARG MET ILE ILE SER PRO SEQRES 34 A 472 PRO LEU VAL ILE THR PRO ALA GLU ILE ASP GLU MET PHE SEQRES 35 A 472 VAL ARG ILE ARG LYS SER LEU ASP GLU ALA GLN ALA GLU SEQRES 36 A 472 ILE GLU LYS GLN GLY LEU MET LYS SER GLU GLY HIS HIS SEQRES 37 A 472 HIS HIS HIS HIS SEQRES 1 B 472 MET SER LEU ALA THR ILE THR ASN HIS MET PRO THR ALA SEQRES 2 B 472 GLU LEU GLN ALA LEU ASP ALA ALA HIS HIS LEU HIS PRO SEQRES 3 B 472 PHE SER ALA ASN ASN ALA LEU GLY GLU GLU GLY THR ARG SEQRES 4 B 472 VAL ILE THR ARG ALA ARG GLY VAL TRP LEU ASN ASP SER SEQRES 5 B 472 GLU GLY GLU GLU ILE LEU ASP ALA MET ALA GLY LEU TRP SEQRES 6 B 472 CYS VAL ASN ILE GLY TYR GLY ARG ASP GLU LEU ALA GLU SEQRES 7 B 472 VAL ALA ALA ARG GLN MET ARG GLU LEU PRO TYR TYR ASN SEQRES 8 B 472 THR PHE PHE LYS THR THR HIS VAL PRO ALA ILE ALA LEU SEQRES 9 B 472 ALA GLN LYS LEU ALA GLU LEU ALA PRO GLY ASP LEU ASN SEQRES 10 B 472 HIS VAL PHE PHE ALA GLY GLY GLY SER GLU ALA ASN ASP SEQRES 11 B 472 THR ASN ILE ARG MET VAL ARG THR TYR TRP GLN ASN LYS SEQRES 12 B 472 GLY GLN PRO GLU LYS THR VAL ILE ILE SER ARG LYS ASN SEQRES 13 B 472 ALA TYR HIS GLY SER THR VAL ALA SER SER ALA LEU GLY SEQRES 14 B 472 GLY MET ALA GLY MET HIS ALA GLN SER GLY LEU ILE PRO SEQRES 15 B 472 ASP VAL HIS HIS ILE ASN GLN PRO ASN TRP TRP ALA GLU SEQRES 16 B 472 GLY GLY ASP MET ASP PRO GLU GLU PHE GLY LEU ALA ARG SEQRES 17 B 472 ALA ARG GLU LEU GLU GLU ALA ILE LEU GLU LEU GLY GLU SEQRES 18 B 472 ASN ARG VAL ALA ALA PHE ILE ALA GLU PRO VAL GLN GLY SEQRES 19 B 472 ALA GLY GLY VAL ILE VAL ALA PRO ASP SER TYR TRP PRO SEQRES 20 B 472 GLU ILE GLN ARG ILE CYS ASP LYS TYR ASP ILE LEU LEU SEQRES 21 B 472 ILE ALA ASP GLU VAL ILE CYS GLY PHE GLY ARG THR GLY SEQRES 22 B 472 ASN TRP PHE GLY THR GLN THR MET GLY ILE ARG PRO HIS SEQRES 23 B 472 ILE MET THR ILE ALA LYS GLY LEU SER SER GLY TYR ALA SEQRES 24 B 472 PRO ILE GLY GLY SER ILE VAL CYS ASP GLU VAL ALA HIS SEQRES 25 B 472 VAL ILE GLY LYS ASP GLU PHE ASN HIS GLY TYR THR TYR SEQRES 26 B 472 SER GLY HIS PRO VAL ALA ALA ALA VAL ALA LEU GLU ASN SEQRES 27 B 472 LEU ARG ILE LEU GLU GLU GLU ASN ILE LEU ASP HIS VAL SEQRES 28 B 472 ARG ASN VAL ALA ALA PRO TYR LEU LYS GLU LYS TRP GLU SEQRES 29 B 472 ALA LEU THR ASP HIS PRO LEU VAL GLY GLU ALA LYS ILE SEQRES 30 B 472 VAL GLY MET MET ALA SER ILE ALA LEU THR PRO ASN LYS SEQRES 31 B 472 ALA SER ARG ALA LYS PHE ALA SER GLU PRO GLY THR ILE SEQRES 32 B 472 GLY TYR ILE CYS ARG GLU ARG CYS PHE ALA ASN ASN LEU SEQRES 33 B 472 ILE MET ARG HIS VAL GLY ASP ARG MET ILE ILE SER PRO SEQRES 34 B 472 PRO LEU VAL ILE THR PRO ALA GLU ILE ASP GLU MET PHE SEQRES 35 B 472 VAL ARG ILE ARG LYS SER LEU ASP GLU ALA GLN ALA GLU SEQRES 36 B 472 ILE GLU LYS GLN GLY LEU MET LYS SER GLU GLY HIS HIS SEQRES 37 B 472 HIS HIS HIS HIS HET SO4 A 471 5 HET CL A 472 1 HET SO4 B 471 5 HET CL B 472 1 HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION FORMUL 3 SO4 2(O4 S 2-) FORMUL 4 CL 2(CL 1-) FORMUL 7 HOH *666(H2 O) HELIX 1 1 PRO A 9 HIS A 20 1 12 HELIX 2 2 ALA A 27 GLY A 35 1 9 HELIX 3 3 MET A 59 CYS A 64 1 6 HELIX 4 4 ARG A 71 LEU A 85 1 15 HELIX 5 5 HIS A 96 ALA A 110 1 15 HELIX 6 6 GLY A 122 LYS A 141 1 20 HELIX 7 7 THR A 160 GLY A 167 1 8 HELIX 8 8 MET A 169 GLN A 175 1 7 HELIX 9 9 ASN A 189 GLY A 194 1 6 HELIX 10 10 ASP A 198 GLY A 218 1 21 HELIX 11 11 SER A 242 TYR A 254 1 13 HELIX 12 12 PHE A 274 GLY A 280 1 7 HELIX 13 13 ALA A 289 SER A 293 5 5 HELIX 14 14 ASP A 306 GLY A 313 1 8 HELIX 15 15 HIS A 326 GLU A 343 1 18 HELIX 16 16 ASN A 344 VAL A 352 1 9 HELIX 17 17 VAL A 352 ALA A 363 1 12 HELIX 18 18 LEU A 364 HIS A 367 5 4 HELIX 19 19 ASN A 387 ARG A 391 5 5 HELIX 20 20 GLY A 399 ASN A 412 1 14 HELIX 21 21 THR A 432 GLY A 458 1 27 HELIX 22 22 PRO B 9 HIS B 20 1 12 HELIX 23 23 ALA B 27 GLY B 35 1 9 HELIX 24 24 MET B 59 CYS B 64 1 6 HELIX 25 25 ASP B 72 LEU B 85 1 14 HELIX 26 26 VAL B 97 ALA B 110 1 14 HELIX 27 27 GLY B 122 LYS B 141 1 20 HELIX 28 28 THR B 160 GLY B 167 1 8 HELIX 29 29 MET B 169 ALA B 174 1 6 HELIX 30 30 ASN B 189 GLY B 194 1 6 HELIX 31 31 ASP B 198 GLY B 218 1 21 HELIX 32 32 SER B 242 TYR B 254 1 13 HELIX 33 33 PHE B 274 MET B 279 1 6 HELIX 34 34 ALA B 289 SER B 293 5 5 HELIX 35 35 ASP B 306 GLY B 313 1 8 HELIX 36 36 HIS B 326 GLU B 343 1 18 HELIX 37 37 ASN B 344 VAL B 352 1 9 HELIX 38 38 VAL B 352 ALA B 363 1 12 HELIX 39 39 LEU B 364 HIS B 367 5 4 HELIX 40 40 ASN B 387 ARG B 391 5 5 HELIX 41 41 GLY B 399 ASN B 412 1 14 HELIX 42 42 THR B 432 GLN B 457 1 26 SHEET 1 A 8 HIS A 21 LEU A 22 0 SHEET 2 A 8 LEU B 114 ALA B 120 1 O VAL B 117 N LEU A 22 SHEET 3 A 8 GLY B 300 CYS B 305 -1 O VAL B 304 N HIS B 116 SHEET 4 A 8 ILE B 285 ILE B 288 -1 N MET B 286 O ILE B 303 SHEET 5 A 8 LEU B 257 ASP B 261 1 N ALA B 260 O ILE B 285 SHEET 6 A 8 VAL B 222 ALA B 227 1 N PHE B 225 O ILE B 259 SHEET 7 A 8 VAL B 148 ARG B 152 1 N VAL B 148 O ALA B 223 SHEET 8 A 8 VAL B 182 ILE B 185 1 O HIS B 183 N SER B 151 SHEET 1 B 4 GLU A 54 LEU A 56 0 SHEET 2 B 4 TRP A 46 ASP A 49 -1 N LEU A 47 O ILE A 55 SHEET 3 B 4 ARG A 37 ARG A 43 -1 N ARG A 41 O ASN A 48 SHEET 4 B 4 THR B 94 HIS B 96 1 O THR B 95 N ILE A 39 SHEET 1 C 5 THR A 94 THR A 95 0 SHEET 2 C 5 ARG B 37 ARG B 43 1 O ILE B 39 N THR A 95 SHEET 3 C 5 TRP B 46 ASP B 49 -1 O ASN B 48 N ARG B 41 SHEET 4 C 5 GLU B 54 ASP B 57 -1 O ILE B 55 N LEU B 47 SHEET 5 C 5 LEU B 414 ILE B 415 1 O ILE B 415 N LEU B 56 SHEET 1 D 8 VAL A 182 ILE A 185 0 SHEET 2 D 8 VAL A 148 ARG A 152 1 N SER A 151 O ILE A 185 SHEET 3 D 8 VAL A 222 ALA A 227 1 O ALA A 224 N ILE A 150 SHEET 4 D 8 LEU A 257 ASP A 261 1 O ILE A 259 N PHE A 225 SHEET 5 D 8 ILE A 285 ILE A 288 1 O ILE A 285 N ALA A 260 SHEET 6 D 8 GLY A 300 CYS A 305 -1 O GLY A 301 N ILE A 288 SHEET 7 D 8 LEU A 114 ALA A 120 -1 N HIS A 116 O VAL A 304 SHEET 8 D 8 HIS B 21 LEU B 22 1 O LEU B 22 N VAL A 117 SHEET 1 E 4 VAL A 370 VAL A 376 0 SHEET 2 E 4 MET A 379 LEU A 384 -1 O SER A 381 N LYS A 374 SHEET 3 E 4 ARG A 422 ILE A 425 -1 O ILE A 425 N ALA A 380 SHEET 4 E 4 ARG A 417 VAL A 419 -1 N VAL A 419 O ARG A 422 SHEET 1 F 4 VAL B 370 VAL B 376 0 SHEET 2 F 4 MET B 379 LEU B 384 -1 O ALA B 383 N GLY B 371 SHEET 3 F 4 ARG B 422 ILE B 425 -1 O ILE B 425 N ALA B 380 SHEET 4 F 4 ARG B 417 VAL B 419 -1 N ARG B 417 O ILE B 424 SITE 1 AC1 9 GLY A 123 SER A 124 HOH A 487 HOH A 561 SITE 2 AC1 9 HOH A 644 HOH A 724 TYR B 321 THR B 322 SITE 3 AC1 9 HOH B 718 SITE 1 AC2 4 ASN A 189 ALA A 192 ARG A 422 HOH A 566 SITE 1 AC3 9 TYR A 321 THR A 322 HOH A 730 GLY B 123 SITE 2 AC3 9 SER B 124 HOH B 478 HOH B 671 HOH B 742 SITE 3 AC3 9 HOH B 893 SITE 1 AC4 3 ASN B 189 ARG B 422 HOH B 737 CRYST1 64.246 113.605 130.985 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015565 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008802 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007634 0.00000