HEADER PROTEIN BINDING 04-JUN-09 3HPK TITLE OXIDIZED DIMERIC PICK1 PDZ IN COMPLEX WITH THE CARBOXYL TAIL PEPTIDE TITLE 2 OF GLUR2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PRKCA-BINDING PROTEIN,9-MER PEPTIDE OF THE GLUR2 SUBUNIT; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: PICK1 PDZ DOMAIN; COMPND 5 SYNONYM: PROTEIN INTERACTING WITH C KINASE 1,ISOFORM CRA_B,PROTEIN COMPND 6 INTERACTING WITH PRKCA 1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS, SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_COMMON: RAT; SOURCE 4 ORGANISM_TAXID: 10116, 32630; SOURCE 5 GENE: PICK1, RCG_60080; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET32A KEYWDS OXIDIZED, PDZ DOMAIN, KINASE, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR J.YU,Y.SHI,M.ZHANG REVDAT 3 01-NOV-23 3HPK 1 REMARK REVDAT 2 21-JUN-17 3HPK 1 COMPND SOURCE REVDAT 1 09-JUN-10 3HPK 0 JRNL AUTH Y.SHI,J.YU,Y.JIA,L.PAN,C.SHEN,J.XIA,M.ZHANG JRNL TITL REDOX-REGULATED LIPID MEMBRANE BINDING OF THE PICK1 PDZ JRNL TITL 2 DOMAIN. JRNL REF BIOCHEMISTRY V. 49 4432 2010 JRNL REFN ISSN 0006-2960 JRNL PMID 20426484 JRNL DOI 10.1021/BI100269T REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 80.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 9933 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1082 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 728 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.39 REMARK 3 BIN R VALUE (WORKING SET) : 0.2220 REMARK 3 BIN FREE R VALUE SET COUNT : 81 REMARK 3 BIN FREE R VALUE : 0.2940 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1622 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 132 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.78 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.35000 REMARK 3 B22 (A**2) : -0.14000 REMARK 3 B33 (A**2) : -0.21000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.366 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.225 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.135 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.059 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.923 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1650 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2234 ; 1.124 ; 1.990 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 217 ; 5.621 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 60 ;36.154 ;27.333 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 295 ;14.664 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 2 ; 4.215 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 265 ; 0.068 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1202 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 725 ; 0.205 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1155 ; 0.295 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 141 ; 0.124 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 40 ; 0.161 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 5 ; 0.159 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1116 ; 0.776 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1744 ; 0.853 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 593 ; 1.178 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 490 ; 1.880 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 14 A 125 REMARK 3 ORIGIN FOR THE GROUP (A): -14.2023 -1.2475 -17.9041 REMARK 3 T TENSOR REMARK 3 T11: -0.1020 T22: -0.0815 REMARK 3 T33: -0.0821 T12: -0.0010 REMARK 3 T13: 0.0103 T23: -0.0302 REMARK 3 L TENSOR REMARK 3 L11: 3.0817 L22: 3.3118 REMARK 3 L33: 2.8457 L12: 0.8072 REMARK 3 L13: -1.0718 L23: -0.8952 REMARK 3 S TENSOR REMARK 3 S11: 0.0899 S12: 0.1681 S13: 0.0461 REMARK 3 S21: -0.0645 S22: -0.0509 S23: 0.2416 REMARK 3 S31: 0.0173 S32: -0.1403 S33: -0.0389 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 19 B 125 REMARK 3 ORIGIN FOR THE GROUP (A): -1.8144 18.3286 -7.0059 REMARK 3 T TENSOR REMARK 3 T11: -0.1066 T22: -0.0820 REMARK 3 T33: -0.1075 T12: -0.0300 REMARK 3 T13: 0.0034 T23: -0.0088 REMARK 3 L TENSOR REMARK 3 L11: 2.1105 L22: 5.0192 REMARK 3 L33: 6.0219 L12: 1.0933 REMARK 3 L13: 0.8068 L23: 2.4008 REMARK 3 S TENSOR REMARK 3 S11: 0.0197 S12: -0.0011 S13: -0.0564 REMARK 3 S21: 0.2258 S22: -0.0729 S23: 0.0700 REMARK 3 S31: 0.3271 S32: -0.0863 S33: 0.0532 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3HPK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-JUN-09. REMARK 100 THE DEPOSITION ID IS D_1000053424. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 8.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : CONFOCAL OPTICS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11020 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 80.850 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 9.200 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 9.10 REMARK 200 R MERGE FOR SHELL (I) : 0.41700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2PKU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% (W/V) PEG3350, 0.2M LITHIUM REMARK 280 CITRATE, PH 8.4, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.63000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.41500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 25.89500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 40.41500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.63000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 25.89500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PHE A 2 REMARK 465 ALA A 3 REMARK 465 ASP A 4 REMARK 465 LEU A 5 REMARK 465 ASP A 6 REMARK 465 TYR A 7 REMARK 465 ASP A 8 REMARK 465 ILE A 9 REMARK 465 GLU A 10 REMARK 465 GLU A 11 REMARK 465 ASP A 12 REMARK 465 LYS A 13 REMARK 465 MET B 1 REMARK 465 PHE B 2 REMARK 465 ALA B 3 REMARK 465 ASP B 4 REMARK 465 LEU B 5 REMARK 465 ASP B 6 REMARK 465 TYR B 7 REMARK 465 ASP B 8 REMARK 465 ILE B 9 REMARK 465 GLU B 10 REMARK 465 GLU B 11 REMARK 465 ASP B 12 REMARK 465 LYS B 13 REMARK 465 LEU B 14 REMARK 465 GLY B 15 REMARK 465 ILE B 16 REMARK 465 PRO B 17 REMARK 465 THR B 18 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN B 42 -125.19 64.37 REMARK 500 ASP B 107 72.87 47.54 REMARK 500 LEU B 114 4.15 -67.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 126 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2PKU RELATED DB: PDB REMARK 900 RELATED ID: 3HPM RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS SEQUENCE IS FUSED WITH PROTEASE 3C CLEAVAGE SITE AND THE C- REMARK 999 TERMINAL TAIL 9 AMINO ACID RESIDUES OF THE GLUR2 SUBUNIT. DBREF 3HPK A 1 110 UNP Q6GQQ2 Q6GQQ2_RAT 1 110 DBREF 3HPK A 111 125 PDB 3HPK 3HPK 111 125 DBREF 3HPK B 1 110 UNP Q6GQQ2 Q6GQQ2_RAT 1 110 DBREF 3HPK B 111 125 PDB 3HPK 3HPK 111 125 SEQRES 1 A 125 MET PHE ALA ASP LEU ASP TYR ASP ILE GLU GLU ASP LYS SEQRES 2 A 125 LEU GLY ILE PRO THR VAL PRO GLY LYS VAL THR LEU GLN SEQRES 3 A 125 LYS ASP ALA GLN ASN LEU ILE GLY ILE SER ILE GLY GLY SEQRES 4 A 125 GLY ALA GLN TYR CYS PRO CYS LEU TYR ILE VAL GLN VAL SEQRES 5 A 125 PHE ASP ASN THR PRO ALA ALA LEU ASP GLY THR VAL ALA SEQRES 6 A 125 ALA GLY ASP GLU ILE THR GLY VAL ASN GLY ARG SER ILE SEQRES 7 A 125 LYS GLY LYS THR LYS VAL GLU VAL ALA LYS MET ILE GLN SEQRES 8 A 125 GLU VAL LYS GLY GLU VAL THR ILE HIS TYR ASN LYS LEU SEQRES 9 A 125 GLN ALA ASP PRO LYS GLN LEU GLU VAL LEU PHE ASN GLY SEQRES 10 A 125 PRO GLY ILE GLU SER VAL LYS ILE SEQRES 1 B 125 MET PHE ALA ASP LEU ASP TYR ASP ILE GLU GLU ASP LYS SEQRES 2 B 125 LEU GLY ILE PRO THR VAL PRO GLY LYS VAL THR LEU GLN SEQRES 3 B 125 LYS ASP ALA GLN ASN LEU ILE GLY ILE SER ILE GLY GLY SEQRES 4 B 125 GLY ALA GLN TYR CYS PRO CYS LEU TYR ILE VAL GLN VAL SEQRES 5 B 125 PHE ASP ASN THR PRO ALA ALA LEU ASP GLY THR VAL ALA SEQRES 6 B 125 ALA GLY ASP GLU ILE THR GLY VAL ASN GLY ARG SER ILE SEQRES 7 B 125 LYS GLY LYS THR LYS VAL GLU VAL ALA LYS MET ILE GLN SEQRES 8 B 125 GLU VAL LYS GLY GLU VAL THR ILE HIS TYR ASN LYS LEU SEQRES 9 B 125 GLN ALA ASP PRO LYS GLN LEU GLU VAL LEU PHE ASN GLY SEQRES 10 B 125 PRO GLY ILE GLU SER VAL LYS ILE HET GOL B 126 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL C3 H8 O3 FORMUL 4 HOH *132(H2 O) HELIX 1 1 THR A 56 GLY A 62 1 7 HELIX 2 2 THR A 82 VAL A 93 1 12 HELIX 3 3 ASP A 107 PHE A 115 1 9 HELIX 4 4 THR B 56 GLY B 62 1 7 HELIX 5 5 THR B 82 VAL B 93 1 12 HELIX 6 6 ASP B 107 LEU B 114 1 8 SHEET 1 A 4 THR A 18 GLN A 26 0 SHEET 2 A 4 GLU A 96 LEU A 104 -1 O VAL A 97 N LEU A 25 SHEET 3 A 4 GLU A 69 VAL A 73 -1 N THR A 71 O HIS A 100 SHEET 4 A 4 ARG A 76 SER A 77 -1 O ARG A 76 N VAL A 73 SHEET 1 B 6 THR A 18 GLN A 26 0 SHEET 2 B 6 GLU A 96 LEU A 104 -1 O VAL A 97 N LEU A 25 SHEET 3 B 6 GLU A 69 VAL A 73 -1 N THR A 71 O HIS A 100 SHEET 4 B 6 LEU A 47 VAL A 52 -1 N LEU A 47 O ILE A 70 SHEET 5 B 6 ILE A 35 GLY A 39 -1 N SER A 36 O VAL A 50 SHEET 6 B 6 GLU A 121 ILE A 125 -1 O ILE A 125 N ILE A 35 SHEET 1 C 4 PRO B 20 LEU B 25 0 SHEET 2 C 4 VAL B 97 ASN B 102 -1 O TYR B 101 N GLY B 21 SHEET 3 C 4 GLU B 69 VAL B 73 -1 N GLY B 72 O HIS B 100 SHEET 4 C 4 ARG B 76 SER B 77 -1 O ARG B 76 N VAL B 73 SHEET 1 D 6 PRO B 20 LEU B 25 0 SHEET 2 D 6 VAL B 97 ASN B 102 -1 O TYR B 101 N GLY B 21 SHEET 3 D 6 GLU B 69 VAL B 73 -1 N GLY B 72 O HIS B 100 SHEET 4 D 6 CYS B 44 VAL B 52 -1 N LEU B 47 O ILE B 70 SHEET 5 D 6 ILE B 35 ALA B 41 -1 N GLY B 38 O TYR B 48 SHEET 6 D 6 VAL B 123 ILE B 125 -1 O ILE B 125 N ILE B 35 SSBOND 1 CYS A 44 CYS B 44 1555 1555 2.01 SSBOND 2 CYS A 46 CYS B 46 1555 1555 2.03 SITE 1 AC1 4 THR B 71 GLY B 72 ARG B 76 HIS B 100 CRYST1 49.260 51.790 80.830 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020300 0.000000 0.000000 0.00000 SCALE2 0.000000 0.019309 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012372 0.00000