HEADER PROTEIN BINDING 04-JUN-09 3HPM TITLE OXIDIZED DIMERIC PICK1 PDZ C46G MUTANT IN COMPLEX WITH THE CARBOXYL TITLE 2 TAIL PEPTIDE OF GLUR2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PRKCA-BINDING PROTEIN,9-MER PEPTIDE OF THE GLUR2 SUBUNIT; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: PICK1 PDZ DOMAIN; COMPND 5 SYNONYM: PROTEIN INTERACTING WITH C KINASE 1,ISOFORM CRA_B,PROTEIN COMPND 6 INTERACTING WITH PRKCA 1; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS, SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_COMMON: RAT; SOURCE 4 ORGANISM_TAXID: 10116, 32630; SOURCE 5 GENE: PICK1, RCG_60080; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET32A KEYWDS OXIDIZED, PDZ DOMAIN, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR J.YU,Y.SHI,M.ZHANG REVDAT 3 01-NOV-23 3HPM 1 REMARK REVDAT 2 21-JUN-17 3HPM 1 COMPND SOURCE SEQADV REVDAT 1 09-JUN-10 3HPM 0 JRNL AUTH Y.SHI,J.YU,Y.JIA,L.PAN,C.SHEN,J.XIA,M.ZHANG JRNL TITL REDOX-REGULATED LIPID MEMBRANE BINDING OF THE PICK1 PDZ JRNL TITL 2 DOMAIN. JRNL REF BIOCHEMISTRY V. 49 4432 2010 JRNL REFN ISSN 0006-2960 JRNL PMID 20426484 JRNL DOI 10.1021/BI100269T REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.62 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 3 NUMBER OF REFLECTIONS : 4307 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.248 REMARK 3 R VALUE (WORKING SET) : 0.243 REMARK 3 FREE R VALUE : 0.295 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.700 REMARK 3 FREE R VALUE TEST SET COUNT : 465 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 REFLECTION IN BIN (WORKING SET) : 321 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.48 REMARK 3 BIN R VALUE (WORKING SET) : 0.3010 REMARK 3 BIN FREE R VALUE SET COUNT : 35 REMARK 3 BIN FREE R VALUE : 0.3880 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1545 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 1 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 77.04 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 6.83000 REMARK 3 B22 (A**2) : -2.96000 REMARK 3 B33 (A**2) : -3.88000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.519 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.417 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 46.451 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.919 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.891 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1566 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2129 ; 1.310 ; 1.982 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 217 ; 5.932 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 52 ;38.168 ;26.923 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 246 ;21.094 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 2 ; 3.566 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 255 ; 0.097 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1166 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 713 ; 0.235 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1100 ; 0.303 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 54 ; 0.185 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 40 ; 0.286 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 2 ; 0.132 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1092 ; 0.281 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1708 ; 0.481 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 517 ; 0.675 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 421 ; 1.072 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 3 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 19 A 38 2 REMARK 3 1 B 19 B 38 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 80 ; 0.12 ; 0.05 REMARK 3 MEDIUM POSITIONAL 1 A (A): 55 ; 0.83 ; 0.50 REMARK 3 TIGHT THERMAL 1 A (A**2): 80 ; 0.06 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 55 ; 0.29 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 46 A 107 2 REMARK 3 1 B 46 B 107 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 2 A (A): 248 ; 0.05 ; 0.05 REMARK 3 MEDIUM POSITIONAL 2 A (A): 193 ; 0.68 ; 0.50 REMARK 3 TIGHT THERMAL 2 A (A**2): 248 ; 0.05 ; 0.50 REMARK 3 MEDIUM THERMAL 2 A (A**2): 193 ; 0.38 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 3 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 117 A 125 2 REMARK 3 1 B 117 B 125 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 3 A (A): 36 ; 0.05 ; 0.05 REMARK 3 MEDIUM POSITIONAL 3 A (A): 27 ; 0.71 ; 0.50 REMARK 3 TIGHT THERMAL 3 A (A**2): 36 ; 0.07 ; 0.50 REMARK 3 MEDIUM THERMAL 3 A (A**2): 27 ; 0.32 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 18 A 125 REMARK 3 ORIGIN FOR THE GROUP (A): 5.2764 -8.5111 10.3793 REMARK 3 T TENSOR REMARK 3 T11: -0.2597 T22: -0.1686 REMARK 3 T33: -0.1490 T12: -0.0066 REMARK 3 T13: 0.0084 T23: 0.0213 REMARK 3 L TENSOR REMARK 3 L11: 4.8078 L22: 8.6197 REMARK 3 L33: 12.1137 L12: -0.3556 REMARK 3 L13: -0.6904 L23: 3.5554 REMARK 3 S TENSOR REMARK 3 S11: -0.1052 S12: 0.3176 S13: 0.0763 REMARK 3 S21: 0.2240 S22: 0.1913 S23: -0.4456 REMARK 3 S31: 0.1105 S32: 0.3258 S33: -0.0861 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 15 B 125 REMARK 3 ORIGIN FOR THE GROUP (A): -8.8031 12.1329 13.4846 REMARK 3 T TENSOR REMARK 3 T11: -0.0873 T22: -0.0591 REMARK 3 T33: 0.0449 T12: 0.0320 REMARK 3 T13: -0.0229 T23: -0.0093 REMARK 3 L TENSOR REMARK 3 L11: 4.6582 L22: 10.1070 REMARK 3 L33: 10.3948 L12: -2.2242 REMARK 3 L13: 1.2542 L23: 0.5746 REMARK 3 S TENSOR REMARK 3 S11: 0.1686 S12: 0.2161 S13: -0.0902 REMARK 3 S21: -0.0542 S22: 0.0237 S23: 0.9490 REMARK 3 S31: -0.2507 S32: -0.3480 S33: -0.1923 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3HPM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-JUN-09. REMARK 100 THE DEPOSITION ID IS D_1000053426. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : CONFOCAL OPTICS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 4797 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 46.620 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.37700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2PKU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% (W/V) PEG4000, 0.1M HEPES, PH 7.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 18.72500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.19000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 46.19000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 18.72500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 27.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 15 REMARK 465 GLY A 16 REMARK 465 SER A 17 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 42 CG CD OE1 NE2 REMARK 470 LYS A 109 CG CD CE NZ REMARK 470 GLN A 110 CG CD OE1 NE2 REMARK 470 LEU A 111 CG CD1 CD2 REMARK 470 VAL A 113 CG1 CG2 REMARK 470 LYS B 22 CG CD CE NZ REMARK 470 GLN B 26 CG CD OE1 NE2 REMARK 470 GLN B 42 CD OE1 NE2 REMARK 470 LYS B 81 CG CD CE NZ REMARK 470 LYS B 88 CD CE NZ REMARK 470 LYS B 94 CG CD CE NZ REMARK 470 LYS B 103 CG CD CE NZ REMARK 470 GLN B 105 CG CD OE1 NE2 REMARK 470 ASP B 107 CG OD1 OD2 REMARK 470 LYS B 109 CG CD CE NZ REMARK 470 GLU B 112 CG CD OE1 OE2 REMARK 470 ASN B 116 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER B 17 -75.26 -139.42 REMARK 500 ALA B 41 -135.14 -82.85 REMARK 500 CYS B 44 76.82 -152.01 REMARK 500 ASN B 116 40.59 -88.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3HPK RELATED DB: PDB REMARK 900 RELATED ID: 2PKU RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS SEQUENCE IS FUSED WITH PROTEASE 3C CLEAVAGE SITE AND THE C- REMARK 999 TERMINAL TAIL 9 AMINO ACID RESIDUES OF THE GLUR2 SUBUNIT. DBREF 3HPM A 19 110 UNP Q6GQQ2 Q6GQQ2_RAT 19 110 DBREF 3HPM A 111 125 PDB 3HPM 3HPM 111 125 DBREF 3HPM B 19 110 UNP Q6GQQ2 Q6GQQ2_RAT 19 110 DBREF 3HPM B 111 125 PDB 3HPM 3HPM 111 125 SEQADV 3HPM GLY A 15 UNP Q6GQQ2 EXPRESSION TAG SEQADV 3HPM GLY A 16 UNP Q6GQQ2 EXPRESSION TAG SEQADV 3HPM SER A 17 UNP Q6GQQ2 EXPRESSION TAG SEQADV 3HPM GLY A 18 UNP Q6GQQ2 EXPRESSION TAG SEQADV 3HPM GLY A 46 UNP Q6GQQ2 CYS 46 ENGINEERED MUTATION SEQADV 3HPM GLY B 15 UNP Q6GQQ2 EXPRESSION TAG SEQADV 3HPM GLY B 16 UNP Q6GQQ2 EXPRESSION TAG SEQADV 3HPM SER B 17 UNP Q6GQQ2 EXPRESSION TAG SEQADV 3HPM GLY B 18 UNP Q6GQQ2 EXPRESSION TAG SEQADV 3HPM GLY B 46 UNP Q6GQQ2 CYS 46 ENGINEERED MUTATION SEQRES 1 A 111 GLY GLY SER GLY VAL PRO GLY LYS VAL THR LEU GLN LYS SEQRES 2 A 111 ASP ALA GLN ASN LEU ILE GLY ILE SER ILE GLY GLY GLY SEQRES 3 A 111 ALA GLN TYR CYS PRO GLY LEU TYR ILE VAL GLN VAL PHE SEQRES 4 A 111 ASP ASN THR PRO ALA ALA LEU ASP GLY THR VAL ALA ALA SEQRES 5 A 111 GLY ASP GLU ILE THR GLY VAL ASN GLY ARG SER ILE LYS SEQRES 6 A 111 GLY LYS THR LYS VAL GLU VAL ALA LYS MET ILE GLN GLU SEQRES 7 A 111 VAL LYS GLY GLU VAL THR ILE HIS TYR ASN LYS LEU GLN SEQRES 8 A 111 ALA ASP PRO LYS GLN LEU GLU VAL LEU PHE ASN GLY PRO SEQRES 9 A 111 GLY ILE GLU SER VAL LYS ILE SEQRES 1 B 111 GLY GLY SER GLY VAL PRO GLY LYS VAL THR LEU GLN LYS SEQRES 2 B 111 ASP ALA GLN ASN LEU ILE GLY ILE SER ILE GLY GLY GLY SEQRES 3 B 111 ALA GLN TYR CYS PRO GLY LEU TYR ILE VAL GLN VAL PHE SEQRES 4 B 111 ASP ASN THR PRO ALA ALA LEU ASP GLY THR VAL ALA ALA SEQRES 5 B 111 GLY ASP GLU ILE THR GLY VAL ASN GLY ARG SER ILE LYS SEQRES 6 B 111 GLY LYS THR LYS VAL GLU VAL ALA LYS MET ILE GLN GLU SEQRES 7 B 111 VAL LYS GLY GLU VAL THR ILE HIS TYR ASN LYS LEU GLN SEQRES 8 B 111 ALA ASP PRO LYS GLN LEU GLU VAL LEU PHE ASN GLY PRO SEQRES 9 B 111 GLY ILE GLU SER VAL LYS ILE FORMUL 3 HOH *(H2 O) HELIX 1 1 THR A 56 GLY A 62 1 7 HELIX 2 2 THR A 82 VAL A 93 1 12 HELIX 3 3 ASP A 107 PHE A 115 1 9 HELIX 4 4 THR B 56 GLY B 62 1 7 HELIX 5 5 THR B 82 VAL B 93 1 12 HELIX 6 6 ASP B 107 PHE B 115 1 9 SHEET 1 A 4 PRO A 20 GLN A 26 0 SHEET 2 A 4 GLU A 96 ASN A 102 -1 O VAL A 97 N LEU A 25 SHEET 3 A 4 GLU A 69 VAL A 73 -1 N GLY A 72 O HIS A 100 SHEET 4 A 4 ARG A 76 SER A 77 -1 O ARG A 76 N VAL A 73 SHEET 1 B 6 PRO A 20 GLN A 26 0 SHEET 2 B 6 GLU A 96 ASN A 102 -1 O VAL A 97 N LEU A 25 SHEET 3 B 6 GLU A 69 VAL A 73 -1 N GLY A 72 O HIS A 100 SHEET 4 B 6 LEU A 47 VAL A 52 -1 N LEU A 47 O ILE A 70 SHEET 5 B 6 ILE A 35 GLY A 39 -1 N GLY A 38 O TYR A 48 SHEET 6 B 6 GLU A 121 LYS A 124 -1 O VAL A 123 N ILE A 37 SHEET 1 C 4 PRO B 20 GLN B 26 0 SHEET 2 C 4 GLU B 96 ASN B 102 -1 O VAL B 97 N LEU B 25 SHEET 3 C 4 GLU B 69 VAL B 73 -1 N THR B 71 O HIS B 100 SHEET 4 C 4 ARG B 76 SER B 77 -1 O ARG B 76 N VAL B 73 SHEET 1 D 6 PRO B 20 GLN B 26 0 SHEET 2 D 6 GLU B 96 ASN B 102 -1 O VAL B 97 N LEU B 25 SHEET 3 D 6 GLU B 69 VAL B 73 -1 N THR B 71 O HIS B 100 SHEET 4 D 6 LEU B 47 VAL B 52 -1 N LEU B 47 O ILE B 70 SHEET 5 D 6 ILE B 35 GLY B 39 -1 N SER B 36 O VAL B 50 SHEET 6 D 6 SER B 122 LYS B 124 -1 O VAL B 123 N ILE B 37 SSBOND 1 CYS A 44 CYS B 44 1555 1555 2.03 CISPEP 1 GLY A 117 PRO A 118 0 -7.23 CISPEP 2 GLY B 117 PRO B 118 0 -9.30 CRYST1 37.450 54.000 92.380 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026702 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018519 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010825 0.00000