HEADER HORMONE BINDING PROTEIN 05-JUN-09 3HQ5 TITLE PROGESTERONE RECEPTOR BOUND TO AN ALKYLPYRROLIDINE LIGAND. COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROGESTERONE RECEPTOR; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 678-933; COMPND 5 SYNONYM: PR, NUCLEAR RECEPTOR SUBFAMILY 3 GROUP C MEMBER 3; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PGR, NR3C3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEAR RECEPTOR, PROGESTERONE RECEPTOR, PR, ALTERNATIVE SPLICING, KEYWDS 2 CYTOPLASM, DNA-BINDING, ISOPEPTIDE BOND, LIPID-BINDING, METAL- KEYWDS 3 BINDING, NUCLEUS, PHOSPHOPROTEIN, POLYMORPHISM, RECEPTOR, STEROID- KEYWDS 4 BINDING, TRANSCRIPTION, TRANSCRIPTION REGULATION, UBL CONJUGATION, KEYWDS 5 ZINC, ZINC-FINGER, HORMONE BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.P.MADAUSS,S.P.WILLIAMS,D.G.WASHBURN REVDAT 4 21-FEB-24 3HQ5 1 REMARK REVDAT 3 24-JUL-19 3HQ5 1 REMARK REVDAT 2 01-NOV-17 3HQ5 1 REMARK REVDAT 1 02-MAR-10 3HQ5 0 JRNL AUTH S.K.THOMPSON,D.G.WASHBURN,J.S.FRAZEE,K.P.MADAUSS,T.H.HOANG, JRNL AUTH 2 L.LAPINSKI,E.T.GRYGIELKO,L.E.GLACE,W.TRIZNA,S.P.WILLIAMS, JRNL AUTH 3 C.DURAISWAMI,J.D.BRAY,N.J.LAPING JRNL TITL RATIONAL DESIGN OF ORALLY-ACTIVE, PYRROLIDINE-BASED JRNL TITL 2 PROGESTERONE RECEPTOR PARTIAL AGONISTS. JRNL REF BIOORG.MED.CHEM.LETT. V. 19 4777 2009 JRNL REFN ISSN 0960-894X JRNL PMID 19595590 JRNL DOI 10.1016/J.BMCL.2009.06.055 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.99 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 27875 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2114 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1997 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3180 REMARK 3 BIN FREE R VALUE SET COUNT : 150 REMARK 3 BIN FREE R VALUE : 0.3650 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3973 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 86 REMARK 3 SOLVENT ATOMS : 448 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.56 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.22000 REMARK 3 B22 (A**2) : -0.05000 REMARK 3 B33 (A**2) : -0.15000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.09000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.291 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.206 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.168 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.604 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.944 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.918 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4184 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2829 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5669 ; 1.116 ; 2.001 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6951 ; 1.096 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 498 ; 5.412 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 169 ;34.239 ;24.320 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 768 ;14.706 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;12.466 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 648 ; 0.058 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4504 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 819 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 971 ; 0.183 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2948 ; 0.173 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2041 ; 0.172 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1937 ; 0.086 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 332 ; 0.151 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 22 ; 0.157 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 60 ; 0.268 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 19 ; 0.143 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2765 ; 0.533 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 997 ; 0.085 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4058 ; 0.808 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1855 ; 1.047 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1611 ; 1.471 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3HQ5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-AUG-09. REMARK 100 THE DEPOSITION ID IS D_1000053445. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : .97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000, DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32216 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.09100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.5940 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.12 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.45200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 1.3.2 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20 % PEG 3350, 0.2M LISO4, 0.1M HEPES REMARK 280 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295.15K, PH 7.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 32.22050 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -68.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 678 REMARK 465 GLN A 679 REMARK 465 ASP A 680 REMARK 465 ILE A 681 REMARK 465 THR A 706 REMARK 465 LYS A 707 REMARK 465 PRO A 708 REMARK 465 MET A 789 REMARK 465 GLN A 860 REMARK 465 LYS A 933 REMARK 465 GLY B 678 REMARK 465 GLN B 679 REMARK 465 ASP B 680 REMARK 465 ILE B 681 REMARK 465 LYS B 933 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 682 CG CD OE1 NE2 REMARK 470 ASP A 697 CG OD1 OD2 REMARK 470 ASP A 709 CG OD1 OD2 REMARK 470 LYS A 861 CG CD CE NZ REMARK 470 ARG A 899 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 932 CG CD CE NZ REMARK 470 GLN B 682 CG CD OE1 NE2 REMARK 470 LEU B 683 CG CD1 CD2 REMARK 470 LYS B 731 CE NZ REMARK 470 LYS B 790 CG CD CE NZ REMARK 470 GLN B 812 CG CD OE1 NE2 REMARK 470 VAL B 863 CG1 CG2 REMARK 470 VAL B 864 CG1 CG2 REMARK 470 GLN B 868 CG CD OE1 NE2 REMARK 470 GLU B 904 CG CD OE1 OE2 REMARK 470 LYS B 932 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 44 O HOH A 294 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 782 84.13 -152.00 REMARK 500 ASN A 785 -151.59 -107.88 REMARK 500 GLU A 786 102.97 -40.00 REMARK 500 GLN A 787 137.65 -36.91 REMARK 500 SER A 792 -176.47 -170.27 REMARK 500 SER A 837 55.28 -101.16 REMARK 500 MET A 924 31.49 -93.20 REMARK 500 SER B 837 53.46 -104.85 REMARK 500 PRO B 906 174.61 -57.99 REMARK 500 MET B 924 35.75 -97.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 786 GLN A 787 -137.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GKK A 934 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 935 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GKK B 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 934 DBREF 3HQ5 A 678 933 UNP P06401 PRGR_HUMAN 678 933 DBREF 3HQ5 B 678 933 UNP P06401 PRGR_HUMAN 678 933 SEQRES 1 A 256 GLY GLN ASP ILE GLN LEU ILE PRO PRO LEU ILE ASN LEU SEQRES 2 A 256 LEU MET SER ILE GLU PRO ASP VAL ILE TYR ALA GLY HIS SEQRES 3 A 256 ASP ASN THR LYS PRO ASP THR SER SER SER LEU LEU THR SEQRES 4 A 256 SER LEU ASN GLN LEU GLY GLU ARG GLN LEU LEU SER VAL SEQRES 5 A 256 VAL LYS TRP SER LYS SER LEU PRO GLY PHE ARG ASN LEU SEQRES 6 A 256 HIS ILE ASP ASP GLN ILE THR LEU ILE GLN TYR SER TRP SEQRES 7 A 256 MET SER LEU MET VAL PHE GLY LEU GLY TRP ARG SER TYR SEQRES 8 A 256 LYS HIS VAL SER GLY GLN MET LEU TYR PHE ALA PRO ASP SEQRES 9 A 256 LEU ILE LEU ASN GLU GLN ARG MET LYS GLU SER SER PHE SEQRES 10 A 256 TYR SER LEU CYS LEU THR MET TRP GLN ILE PRO GLN GLU SEQRES 11 A 256 PHE VAL LYS LEU GLN VAL SER GLN GLU GLU PHE LEU CYS SEQRES 12 A 256 MET LYS VAL LEU LEU LEU LEU ASN THR ILE PRO LEU GLU SEQRES 13 A 256 GLY LEU ARG SER GLN THR GLN PHE GLU GLU MET ARG SER SEQRES 14 A 256 SER TYR ILE ARG GLU LEU ILE LYS ALA ILE GLY LEU ARG SEQRES 15 A 256 GLN LYS GLY VAL VAL SER SER SER GLN ARG PHE TYR GLN SEQRES 16 A 256 LEU THR LYS LEU LEU ASP ASN LEU HIS ASP LEU VAL LYS SEQRES 17 A 256 GLN LEU HIS LEU TYR CYS LEU ASN THR PHE ILE GLN SER SEQRES 18 A 256 ARG ALA LEU SER VAL GLU PHE PRO GLU MET MET SER GLU SEQRES 19 A 256 VAL ILE ALA ALA GLN LEU PRO LYS ILE LEU ALA GLY MET SEQRES 20 A 256 VAL LYS PRO LEU LEU PHE HIS LYS LYS SEQRES 1 B 256 GLY GLN ASP ILE GLN LEU ILE PRO PRO LEU ILE ASN LEU SEQRES 2 B 256 LEU MET SER ILE GLU PRO ASP VAL ILE TYR ALA GLY HIS SEQRES 3 B 256 ASP ASN THR LYS PRO ASP THR SER SER SER LEU LEU THR SEQRES 4 B 256 SER LEU ASN GLN LEU GLY GLU ARG GLN LEU LEU SER VAL SEQRES 5 B 256 VAL LYS TRP SER LYS SER LEU PRO GLY PHE ARG ASN LEU SEQRES 6 B 256 HIS ILE ASP ASP GLN ILE THR LEU ILE GLN TYR SER TRP SEQRES 7 B 256 MET SER LEU MET VAL PHE GLY LEU GLY TRP ARG SER TYR SEQRES 8 B 256 LYS HIS VAL SER GLY GLN MET LEU TYR PHE ALA PRO ASP SEQRES 9 B 256 LEU ILE LEU ASN GLU GLN ARG MET LYS GLU SER SER PHE SEQRES 10 B 256 TYR SER LEU CYS LEU THR MET TRP GLN ILE PRO GLN GLU SEQRES 11 B 256 PHE VAL LYS LEU GLN VAL SER GLN GLU GLU PHE LEU CYS SEQRES 12 B 256 MET LYS VAL LEU LEU LEU LEU ASN THR ILE PRO LEU GLU SEQRES 13 B 256 GLY LEU ARG SER GLN THR GLN PHE GLU GLU MET ARG SER SEQRES 14 B 256 SER TYR ILE ARG GLU LEU ILE LYS ALA ILE GLY LEU ARG SEQRES 15 B 256 GLN LYS GLY VAL VAL SER SER SER GLN ARG PHE TYR GLN SEQRES 16 B 256 LEU THR LYS LEU LEU ASP ASN LEU HIS ASP LEU VAL LYS SEQRES 17 B 256 GLN LEU HIS LEU TYR CYS LEU ASN THR PHE ILE GLN SER SEQRES 18 B 256 ARG ALA LEU SER VAL GLU PHE PRO GLU MET MET SER GLU SEQRES 19 B 256 VAL ILE ALA ALA GLN LEU PRO LYS ILE LEU ALA GLY MET SEQRES 20 B 256 VAL LYS PRO LEU LEU PHE HIS LYS LYS HET SO4 A 1 5 HET SO4 A 3 5 HET SO4 A 4 5 HET SO4 A 5 5 HET GKK A 934 27 HET GOL A 935 6 HET GKK B 2 27 HET GOL B 934 6 HETNAM SO4 SULFATE ION HETNAM GKK 2-CHLORO-4-{[(3S)-1-METHYLPYRROLIDIN-3-YL][2- HETNAM 2 GKK (TRIFLUOROMETHYL)BENZYL]AMINO}BENZONITRILE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 SO4 4(O4 S 2-) FORMUL 7 GKK 2(C20 H19 CL F3 N3) FORMUL 8 GOL 2(C3 H8 O3) FORMUL 11 HOH *448(H2 O) HELIX 1 1 PRO A 685 ILE A 694 1 10 HELIX 2 2 THR A 710 LYS A 734 1 25 HELIX 3 3 GLY A 738 LEU A 742 5 5 HELIX 4 4 HIS A 743 SER A 754 1 12 HELIX 5 5 SER A 754 SER A 772 1 19 HELIX 6 6 SER A 792 TRP A 802 1 11 HELIX 7 7 TRP A 802 GLN A 812 1 11 HELIX 8 8 SER A 814 LEU A 827 1 14 HELIX 9 9 SER A 837 LEU A 858 1 22 HELIX 10 10 VAL A 864 GLN A 897 1 34 HELIX 11 11 GLN A 897 SER A 902 1 6 HELIX 12 12 PRO A 906 ALA A 922 1 17 HELIX 13 13 PRO B 685 ILE B 694 1 10 HELIX 14 14 THR B 710 LEU B 736 1 27 HELIX 15 15 GLY B 738 LEU B 742 5 5 HELIX 16 16 HIS B 743 SER B 772 1 30 HELIX 17 17 ASN B 785 GLU B 791 1 7 HELIX 18 18 PHE B 794 GLN B 812 1 19 HELIX 19 19 SER B 814 LEU B 827 1 14 HELIX 20 20 SER B 837 LEU B 858 1 22 HELIX 21 21 GLY B 862 GLN B 897 1 36 HELIX 22 22 PRO B 906 ALA B 922 1 17 SHEET 1 A 2 LEU A 776 ALA A 779 0 SHEET 2 A 2 LEU A 782 LEU A 784 -1 O LEU A 784 N LEU A 776 SHEET 1 B 2 THR A 829 PRO A 831 0 SHEET 2 B 2 VAL A 925 PRO A 927 -1 O LYS A 926 N ILE A 830 SHEET 1 C 2 LEU B 776 ALA B 779 0 SHEET 2 C 2 LEU B 782 LEU B 784 -1 O LEU B 784 N LEU B 776 SHEET 1 D 2 THR B 829 ILE B 830 0 SHEET 2 D 2 LYS B 926 PRO B 927 -1 O LYS B 926 N ILE B 830 SITE 1 AC1 10 HOH A 72 PRO A 737 GLY A 738 ARG A 740 SITE 2 AC1 10 ASN A 741 HOH A 937 PRO B 737 GLY B 738 SITE 3 AC1 10 ARG B 740 ASN B 741 SITE 1 AC2 5 HOH A 445 PRO A 737 GLY A 738 SER A 847 SITE 2 AC2 5 TYR A 848 SITE 1 AC3 3 PRO B 737 SER B 847 TYR B 848 SITE 1 AC4 6 HOH A 555 GLN A 787 LYS A 790 TYR A 795 SITE 2 AC4 6 SER A 796 LEU A 799 SITE 1 AC5 11 LEU A 718 ASN A 719 MET A 756 MET A 759 SITE 2 AC5 11 LEU A 763 ARG A 766 PHE A 794 MET A 801 SITE 3 AC5 11 LEU A 887 TYR A 890 CYS A 891 SITE 1 AC6 7 HOH A 56 HOH A 217 TYR A 753 THR A 829 SITE 2 AC6 7 HIS A 881 HIS A 888 ILE A 920 SITE 1 AC7 11 LEU B 718 ASN B 719 LEU B 721 GLN B 725 SITE 2 AC7 11 MET B 756 MET B 759 LEU B 763 ARG B 766 SITE 3 AC7 11 LEU B 887 TYR B 890 CYS B 891 SITE 1 AC8 7 HOH B 172 HOH B 380 TYR B 753 THR B 829 SITE 2 AC8 7 HIS B 881 HIS B 888 ILE B 920 CRYST1 57.701 64.441 70.380 90.00 96.51 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017331 0.000000 0.001978 0.00000 SCALE2 0.000000 0.015518 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014301 0.00000