HEADER PROTEIN BINDING, LIGASE 07-JUN-09 3HQM TITLE STRUCTURES OF SPOP-SUBSTRATE COMPLEXES: INSIGHTS INTO MOLECULAR TITLE 2 ARCHITECTURES OF BTB-CUL3 UBIQUITIN LIGASES: SPOPMATHX-CISBC2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPECKLE-TYPE POZ PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 28-166; COMPND 5 SYNONYM: HIB HOMOLOG 1, ROADKILL HOMOLOG 1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: PROTEIN CUBITUS INTERRUPTUS; COMPND 10 CHAIN: C, D; COMPND 11 FRAGMENT: UNP RESIDUES 1356-1367; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SPOP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES KEYWDS UBIQUITIN, E3, SPOP, MATH, CI, NUCLEUS, UBL CONJUGATION PATHWAY, KEYWDS 2 DEVELOPMENTAL PROTEIN, DNA-BINDING, METAL-BINDING, SEGMENTATION KEYWDS 3 POLARITY PROTEIN, ZINC-FINGER, PROTEIN BINDING, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR M.ZHUANG,B.A.SCHULMAN REVDAT 5 06-SEP-23 3HQM 1 REMARK REVDAT 4 13-OCT-21 3HQM 1 REMARK SEQADV REVDAT 3 13-JUL-11 3HQM 1 VERSN REVDAT 2 27-OCT-09 3HQM 1 JRNL REVDAT 1 20-OCT-09 3HQM 0 JRNL AUTH M.ZHUANG,M.F.CALABRESE,J.LIU,M.B.WADDELL,A.NOURSE,M.HAMMEL, JRNL AUTH 2 D.J.MILLER,H.WALDEN,D.M.DUDA,S.N.SEYEDIN,T.HOGGARD, JRNL AUTH 3 J.W.HARPER,K.P.WHITE,B.A.SCHULMAN JRNL TITL STRUCTURES OF SPOP-SUBSTRATE COMPLEXES: INSIGHTS INTO JRNL TITL 2 MOLECULAR ARCHITECTURES OF BTB-CUL3 UBIQUITIN LIGASES. JRNL REF MOL.CELL V. 36 39 2009 JRNL REFN ISSN 1097-2765 JRNL PMID 19818708 JRNL DOI 10.1016/J.MOLCEL.2009.09.022 REMARK 2 REMARK 2 RESOLUTION. 1.74 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.74 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.57 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 3 NUMBER OF REFLECTIONS : 29424 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1582 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.74 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.80 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2067 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE SET COUNT : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2238 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 384 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.37000 REMARK 3 B22 (A**2) : 0.12000 REMARK 3 B33 (A**2) : -0.74000 REMARK 3 B12 (A**2) : -0.14000 REMARK 3 B13 (A**2) : 0.12000 REMARK 3 B23 (A**2) : 0.29000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.121 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.118 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.071 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.130 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.933 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2378 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3210 ; 1.192 ; 1.971 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 299 ; 5.821 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 103 ;35.119 ;23.786 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 446 ;12.601 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;13.389 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 353 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1732 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1082 ; 0.194 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1619 ; 0.309 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 308 ; 0.116 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 65 ; 0.174 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 35 ; 0.121 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1480 ; 0.776 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2305 ; 1.223 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1038 ; 1.922 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 892 ; 3.084 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 28 A 165 REMARK 3 ORIGIN FOR THE GROUP (A): -3.4632 -6.1146 1.2369 REMARK 3 T TENSOR REMARK 3 T11: -0.0319 T22: -0.0199 REMARK 3 T33: -0.0229 T12: -0.0061 REMARK 3 T13: -0.0042 T23: 0.0054 REMARK 3 L TENSOR REMARK 3 L11: 0.4818 L22: 0.8088 REMARK 3 L33: 1.1570 L12: -0.1541 REMARK 3 L13: 0.1599 L23: 0.1824 REMARK 3 S TENSOR REMARK 3 S11: 0.0219 S12: 0.0193 S13: -0.0333 REMARK 3 S21: 0.0829 S22: -0.0014 S23: 0.0120 REMARK 3 S31: 0.0696 S32: 0.0104 S33: -0.0205 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 29 B 164 REMARK 3 ORIGIN FOR THE GROUP (A): -3.9600 11.3977 22.9596 REMARK 3 T TENSOR REMARK 3 T11: -0.0271 T22: -0.0245 REMARK 3 T33: -0.0239 T12: 0.0057 REMARK 3 T13: 0.0057 T23: 0.0064 REMARK 3 L TENSOR REMARK 3 L11: 0.5339 L22: 0.7156 REMARK 3 L33: 1.1600 L12: 0.1667 REMARK 3 L13: -0.2691 L23: 0.2091 REMARK 3 S TENSOR REMARK 3 S11: 0.0202 S12: -0.0254 S13: 0.0339 REMARK 3 S21: -0.0717 S22: -0.0064 S23: 0.0108 REMARK 3 S31: -0.0710 S32: -0.0090 S33: -0.0138 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1360 C 1366 REMARK 3 ORIGIN FOR THE GROUP (A): -7.1354 -16.2427 2.5030 REMARK 3 T TENSOR REMARK 3 T11: 0.0523 T22: -0.1099 REMARK 3 T33: -0.0903 T12: -0.0754 REMARK 3 T13: -0.0385 T23: 0.0036 REMARK 3 L TENSOR REMARK 3 L11: 27.9033 L22: 5.8429 REMARK 3 L33: 6.0672 L12: -4.5551 REMARK 3 L13: -5.1578 L23: 2.0955 REMARK 3 S TENSOR REMARK 3 S11: 0.0337 S12: 0.5268 S13: -0.0958 REMARK 3 S21: 0.3182 S22: 0.0074 S23: 0.0606 REMARK 3 S31: 0.8271 S32: -0.2573 S33: -0.0412 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3HQM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-JUN-09. REMARK 100 THE DEPOSITION ID IS D_1000053462. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUN-08 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31963 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.740 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.03100 REMARK 200 FOR THE DATA SET : 30.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.74 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 1.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.10200 REMARK 200 FOR SHELL : 9.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3HQH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 22 REMARK 465 SER A 23 REMARK 465 GLY A 24 REMARK 465 GLY A 25 REMARK 465 SER A 26 REMARK 465 GLY A 27 REMARK 465 ALA A 61 REMARK 465 ASN A 62 REMARK 465 LYS A 95 REMARK 465 ASP A 166 REMARK 465 GLY B 22 REMARK 465 SER B 23 REMARK 465 GLY B 24 REMARK 465 GLY B 25 REMARK 465 SER B 26 REMARK 465 GLY B 27 REMARK 465 LYS B 28 REMARK 465 GLY B 60 REMARK 465 ALA B 61 REMARK 465 ASN B 62 REMARK 465 ASP B 63 REMARK 465 GLN B 165 REMARK 465 ASP B 166 REMARK 465 ASN C 1356 REMARK 465 THR C 1357 REMARK 465 LEU C 1358 REMARK 465 PHE C 1359 REMARK 465 HIS C 1367 REMARK 465 ASN D 1356 REMARK 465 THR D 1357 REMARK 465 LEU D 1358 REMARK 465 PHE D 1359 REMARK 465 HIS D 1367 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 28 CG CD CE NZ REMARK 470 VAL A 29 CG1 CG2 REMARK 470 GLU A 79 CG CD OE1 OE2 REMARK 470 GLU A 145 CG CD OE1 OE2 REMARK 470 LYS B 64 CG CD CE NZ REMARK 470 SER B 92 OG REMARK 470 LYS B 95 CG CD CE NZ REMARK 470 GLU B 145 CG CD OE1 OE2 REMARK 470 ASP C1361 CG OD1 OD2 REMARK 470 ASP D1361 CG OD1 OD2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 SER A 162 CA CB OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 135 67.92 -118.24 REMARK 500 LYS B 135 65.10 -119.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 4 DBREF 3HQM A 28 166 UNP O43791 SPOP_HUMAN 28 166 DBREF 3HQM B 28 166 UNP O43791 SPOP_HUMAN 28 166 DBREF 3HQM C 1356 1367 UNP P19538 CI_DROME 1356 1367 DBREF 3HQM D 1356 1367 UNP P19538 CI_DROME 1356 1367 SEQADV 3HQM GLY A 22 UNP O43791 EXPRESSION TAG SEQADV 3HQM SER A 23 UNP O43791 EXPRESSION TAG SEQADV 3HQM GLY A 24 UNP O43791 EXPRESSION TAG SEQADV 3HQM GLY A 25 UNP O43791 EXPRESSION TAG SEQADV 3HQM SER A 26 UNP O43791 EXPRESSION TAG SEQADV 3HQM GLY A 27 UNP O43791 EXPRESSION TAG SEQADV 3HQM GLY A 140 UNP O43791 ASP 140 ENGINEERED MUTATION SEQADV 3HQM GLY B 22 UNP O43791 EXPRESSION TAG SEQADV 3HQM SER B 23 UNP O43791 EXPRESSION TAG SEQADV 3HQM GLY B 24 UNP O43791 EXPRESSION TAG SEQADV 3HQM GLY B 25 UNP O43791 EXPRESSION TAG SEQADV 3HQM SER B 26 UNP O43791 EXPRESSION TAG SEQADV 3HQM GLY B 27 UNP O43791 EXPRESSION TAG SEQADV 3HQM GLY B 140 UNP O43791 ASP 140 ENGINEERED MUTATION SEQRES 1 A 145 GLY SER GLY GLY SER GLY LYS VAL VAL LYS PHE SER TYR SEQRES 2 A 145 MET TRP THR ILE ASN ASN PHE SER PHE CYS ARG GLU GLU SEQRES 3 A 145 MET GLY GLU VAL ILE LYS SER SER THR PHE SER SER GLY SEQRES 4 A 145 ALA ASN ASP LYS LEU LYS TRP CYS LEU ARG VAL ASN PRO SEQRES 5 A 145 LYS GLY LEU ASP GLU GLU SER LYS ASP TYR LEU SER LEU SEQRES 6 A 145 TYR LEU LEU LEU VAL SER CYS PRO LYS SER GLU VAL ARG SEQRES 7 A 145 ALA LYS PHE LYS PHE SER ILE LEU ASN ALA LYS GLY GLU SEQRES 8 A 145 GLU THR LYS ALA MET GLU SER GLN ARG ALA TYR ARG PHE SEQRES 9 A 145 VAL GLN GLY LYS ASP TRP GLY PHE LYS LYS PHE ILE ARG SEQRES 10 A 145 ARG GLY PHE LEU LEU ASP GLU ALA ASN GLY LEU LEU PRO SEQRES 11 A 145 ASP ASP LYS LEU THR LEU PHE CYS GLU VAL SER VAL VAL SEQRES 12 A 145 GLN ASP SEQRES 1 B 145 GLY SER GLY GLY SER GLY LYS VAL VAL LYS PHE SER TYR SEQRES 2 B 145 MET TRP THR ILE ASN ASN PHE SER PHE CYS ARG GLU GLU SEQRES 3 B 145 MET GLY GLU VAL ILE LYS SER SER THR PHE SER SER GLY SEQRES 4 B 145 ALA ASN ASP LYS LEU LYS TRP CYS LEU ARG VAL ASN PRO SEQRES 5 B 145 LYS GLY LEU ASP GLU GLU SER LYS ASP TYR LEU SER LEU SEQRES 6 B 145 TYR LEU LEU LEU VAL SER CYS PRO LYS SER GLU VAL ARG SEQRES 7 B 145 ALA LYS PHE LYS PHE SER ILE LEU ASN ALA LYS GLY GLU SEQRES 8 B 145 GLU THR LYS ALA MET GLU SER GLN ARG ALA TYR ARG PHE SEQRES 9 B 145 VAL GLN GLY LYS ASP TRP GLY PHE LYS LYS PHE ILE ARG SEQRES 10 B 145 ARG GLY PHE LEU LEU ASP GLU ALA ASN GLY LEU LEU PRO SEQRES 11 B 145 ASP ASP LYS LEU THR LEU PHE CYS GLU VAL SER VAL VAL SEQRES 12 B 145 GLN ASP SEQRES 1 C 12 ASN THR LEU PHE PRO ASP VAL SER SER SER THR HIS SEQRES 1 D 12 ASN THR LEU PHE PRO ASP VAL SER SER SER THR HIS HET SO4 A 1 5 HET SO4 A 4 5 HET SO4 B 2 5 HET SO4 B 3 5 HETNAM SO4 SULFATE ION FORMUL 5 SO4 4(O4 S 2-) FORMUL 9 HOH *384(H2 O) HELIX 1 1 ASN A 40 CYS A 44 5 5 HELIX 2 2 ASP A 77 LYS A 81 5 5 HELIX 3 3 ARG A 139 LEU A 143 1 5 HELIX 4 4 ASP A 144 GLY A 148 5 5 HELIX 5 5 LEU A 150 LYS A 154 5 5 HELIX 6 6 ASN B 40 CYS B 44 5 5 HELIX 7 7 ASP B 77 LYS B 81 5 5 HELIX 8 8 ARG B 139 LEU B 143 1 5 HELIX 9 9 ASP B 144 GLY B 148 5 5 HELIX 10 10 LEU B 150 LYS B 154 5 5 SHEET 1 A 4 VAL A 29 ILE A 38 0 SHEET 2 A 4 LEU A 155 VAL A 164 -1 O LEU A 155 N ILE A 38 SHEET 3 A 4 VAL A 98 LEU A 107 -1 N ARG A 99 O VAL A 164 SHEET 4 A 4 GLU A 113 GLU A 118 -1 O THR A 114 N ILE A 106 SHEET 1 B 4 VAL A 29 ILE A 38 0 SHEET 2 B 4 LEU A 155 VAL A 164 -1 O LEU A 155 N ILE A 38 SHEET 3 B 4 VAL A 98 LEU A 107 -1 N ARG A 99 O VAL A 164 SHEET 4 B 4 TYR A 123 PHE A 125 -1 O PHE A 125 N VAL A 98 SHEET 1 C 4 ILE A 52 LYS A 53 0 SHEET 2 C 4 LYS A 66 ASN A 72 -1 O VAL A 71 N ILE A 52 SHEET 3 C 4 TYR A 83 SER A 92 -1 O LEU A 89 N CYS A 68 SHEET 4 C 4 ASP A 130 ARG A 138 -1 O TRP A 131 N LEU A 88 SHEET 1 D 4 VAL B 30 ILE B 38 0 SHEET 2 D 4 LEU B 155 VAL B 163 -1 O LEU B 155 N ILE B 38 SHEET 3 D 4 VAL B 98 LEU B 107 -1 N SER B 105 O PHE B 158 SHEET 4 D 4 GLU B 113 GLU B 118 -1 O MET B 117 N PHE B 104 SHEET 1 E 4 VAL B 30 ILE B 38 0 SHEET 2 E 4 LEU B 155 VAL B 163 -1 O LEU B 155 N ILE B 38 SHEET 3 E 4 VAL B 98 LEU B 107 -1 N SER B 105 O PHE B 158 SHEET 4 E 4 TYR B 123 PHE B 125 -1 O TYR B 123 N ALA B 100 SHEET 1 F 4 ILE B 52 LYS B 53 0 SHEET 2 F 4 LYS B 66 ASN B 72 -1 O VAL B 71 N ILE B 52 SHEET 3 F 4 TYR B 83 SER B 92 -1 O LEU B 89 N CYS B 68 SHEET 4 F 4 ASP B 130 ARG B 138 -1 O TRP B 131 N LEU B 88 SITE 1 AC1 6 HOH A 13 CYS A 44 ARG A 45 GLU A 46 SITE 2 AC1 6 HOH A 334 ARG B 138 SITE 1 AC2 7 ILE A 137 ARG A 138 HOH B 16 CYS B 44 SITE 2 AC2 7 ARG B 45 GLU B 46 HOH B 167 SITE 1 AC3 10 HOH A 208 HOH A 215 HOH A 273 HOH A 322 SITE 2 AC3 10 HOH B 5 TYR B 34 TRP B 36 SER B 54 SITE 3 AC3 10 SER B 55 HOH B 247 SITE 1 AC4 8 HOH A 6 TYR A 34 TRP A 36 SER A 54 SITE 2 AC4 8 SER A 55 HOH A 195 HOH A 248 HOH A 318 CRYST1 44.281 48.100 49.860 63.00 64.04 62.89 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022583 -0.011561 -0.007720 0.00000 SCALE2 0.000000 0.023356 -0.007833 0.00000 SCALE3 0.000000 0.000000 0.023528 0.00000