HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 09-JUN-09 3HRG TITLE CRYSTAL STRUCTURE OF BACTEROIDES THETAIOTAOMICRON BT_3980, PROTEIN TITLE 2 WITH ACTIN-LIKE ATPASE FOLD AND UNKNOWN FUNCTION (NP_812891.1) FROM TITLE 3 BACTEROIDES THETAIOTAOMICRON VPI-5482 AT 1.85 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN BT_3980 WITH ACTIN-LIKE ATPASE COMPND 3 FOLD; COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES THETAIOTAOMICRON VPI-5482; SOURCE 3 ORGANISM_TAXID: 226186; SOURCE 4 GENE: BT_3980, NP_812891.1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS NP_812891.1, BACTEROIDES THETAIOTAOMICRON BT_3980, PROTEIN WITH KEYWDS 2 ACTIN-LIKE ATPASE FOLD AND UNKNOWN FUNCTION, STRUCTURAL GENOMICS, KEYWDS 3 JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE KEYWDS 4 INITIATIVE, PSI-2, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 6 01-FEB-23 3HRG 1 REMARK SEQADV REVDAT 5 24-JUL-19 3HRG 1 REMARK LINK REVDAT 4 25-OCT-17 3HRG 1 REMARK REVDAT 3 13-JUL-11 3HRG 1 VERSN REVDAT 2 24-NOV-09 3HRG 1 TITLE REVDAT 1 23-JUN-09 3HRG 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF BACTEROIDES THETAIOTAOMICRON BT_3980, JRNL TITL 2 PROTEIN WITH ACTIN-LIKE ATPASE FOLD AND UNKNOWN FUNCTION JRNL TITL 3 (NP_812891.1) FROM BACTEROIDES THETAIOTAOMICRON VPI-5482 AT JRNL TITL 4 1.85 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0053 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.58 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 25091 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1277 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1692 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.24 REMARK 3 BIN R VALUE (WORKING SET) : 0.2860 REMARK 3 BIN FREE R VALUE SET COUNT : 96 REMARK 3 BIN FREE R VALUE : 0.3590 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2098 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 19 REMARK 3 SOLVENT ATOMS : 246 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 25.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.59 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.14000 REMARK 3 B22 (A**2) : -0.67000 REMARK 3 B33 (A**2) : 0.54000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.161 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.150 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.095 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.989 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.923 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2436 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1670 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3333 ; 1.730 ; 1.963 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4121 ; 1.139 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 327 ; 3.380 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 127 ;32.643 ;24.961 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 471 ;10.396 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;12.791 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 368 ; 0.091 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2781 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 511 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1436 ; 0.600 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 568 ; 0.147 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2364 ; 1.099 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1000 ; 1.781 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 942 ; 2.884 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 35 REMARK 3 ORIGIN FOR THE GROUP (A): 48.2580 32.9180 13.1380 REMARK 3 T TENSOR REMARK 3 T11: 0.1057 T22: 0.0783 REMARK 3 T33: 0.0924 T12: 0.0137 REMARK 3 T13: 0.0024 T23: 0.0073 REMARK 3 L TENSOR REMARK 3 L11: 4.0229 L22: 5.1436 REMARK 3 L33: 2.4014 L12: -3.3427 REMARK 3 L13: -1.9543 L23: 1.5044 REMARK 3 S TENSOR REMARK 3 S11: 0.0371 S12: 0.2311 S13: -0.1945 REMARK 3 S21: -0.0152 S22: -0.1554 S23: 0.2845 REMARK 3 S31: -0.0311 S32: -0.2716 S33: 0.1182 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 36 A 67 REMARK 3 ORIGIN FOR THE GROUP (A): 60.8910 35.1520 10.1220 REMARK 3 T TENSOR REMARK 3 T11: 0.1412 T22: 0.0631 REMARK 3 T33: 0.1974 T12: 0.0085 REMARK 3 T13: 0.0242 T23: 0.0252 REMARK 3 L TENSOR REMARK 3 L11: 7.6167 L22: 2.3914 REMARK 3 L33: 3.7918 L12: -0.9665 REMARK 3 L13: -3.7484 L23: 2.0414 REMARK 3 S TENSOR REMARK 3 S11: 0.0829 S12: 0.1255 S13: 0.2220 REMARK 3 S21: -0.1314 S22: 0.0404 S23: -0.3197 REMARK 3 S31: -0.2751 S32: -0.0243 S33: -0.1234 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 68 A 137 REMARK 3 ORIGIN FOR THE GROUP (A): 64.0820 15.4660 17.9790 REMARK 3 T TENSOR REMARK 3 T11: 0.0746 T22: 0.0483 REMARK 3 T33: 0.0469 T12: 0.0161 REMARK 3 T13: -0.0395 T23: -0.0030 REMARK 3 L TENSOR REMARK 3 L11: 1.5139 L22: 4.7006 REMARK 3 L33: 1.5394 L12: -0.3331 REMARK 3 L13: 0.0768 L23: 0.2144 REMARK 3 S TENSOR REMARK 3 S11: -0.0757 S12: -0.1173 S13: 0.1419 REMARK 3 S21: 0.3963 S22: 0.0053 S23: -0.3108 REMARK 3 S31: 0.0111 S32: 0.0748 S33: 0.0704 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 138 A 155 REMARK 3 ORIGIN FOR THE GROUP (A): 50.0150 14.6060 12.2270 REMARK 3 T TENSOR REMARK 3 T11: 0.1327 T22: 0.1837 REMARK 3 T33: 0.1650 T12: 0.0374 REMARK 3 T13: 0.0201 T23: -0.0282 REMARK 3 L TENSOR REMARK 3 L11: 6.0692 L22: 6.0220 REMARK 3 L33: 2.9387 L12: 4.3126 REMARK 3 L13: 2.9286 L23: 3.7421 REMARK 3 S TENSOR REMARK 3 S11: 0.0244 S12: -0.1519 S13: 0.1321 REMARK 3 S21: 0.2266 S22: -0.2943 S23: 0.4315 REMARK 3 S31: -0.0413 S32: -0.4785 S33: 0.2699 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 156 A 240 REMARK 3 ORIGIN FOR THE GROUP (A): 53.3270 6.2650 -2.4000 REMARK 3 T TENSOR REMARK 3 T11: 0.0319 T22: 0.0207 REMARK 3 T33: 0.0637 T12: 0.0047 REMARK 3 T13: 0.0012 T23: -0.0141 REMARK 3 L TENSOR REMARK 3 L11: 2.3685 L22: 3.6981 REMARK 3 L33: 3.9102 L12: 0.6270 REMARK 3 L13: 0.2515 L23: 1.0032 REMARK 3 S TENSOR REMARK 3 S11: -0.0970 S12: 0.0544 S13: 0.0545 REMARK 3 S21: -0.1654 S22: -0.1186 S23: 0.1650 REMARK 3 S31: 0.0236 S32: -0.2022 S33: 0.2157 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 241 A 256 REMARK 3 ORIGIN FOR THE GROUP (A): 47.2010 20.7170 6.1330 REMARK 3 T TENSOR REMARK 3 T11: 0.5193 T22: 0.2798 REMARK 3 T33: 0.4125 T12: 0.0379 REMARK 3 T13: -0.0104 T23: -0.0632 REMARK 3 L TENSOR REMARK 3 L11: 5.0189 L22: 11.3118 REMARK 3 L33: 11.5348 L12: 6.7797 REMARK 3 L13: 6.8982 L23: 11.4203 REMARK 3 S TENSOR REMARK 3 S11: -0.3065 S12: -0.3021 S13: 0.7453 REMARK 3 S21: 0.2031 S22: -0.1507 S23: 0.4361 REMARK 3 S31: 0.1614 S32: -0.1446 S33: 0.4572 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. ATOM RECORD CONTAINS RESIDUAL B FACTORS REMARK 3 ONLY. 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE REMARK 3 ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REMARK 3 REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. REMARK 3 ELECTRON DENSITY RESEMBLING CITRATE WAS OBSERVED AT THE PUTATIVE REMARK 3 ACTIVE SITE. HOWEVER, BECAUSE REFINEMENT ATTEMPTS WITH THIS REMARK 3 DENSITY MODELED AS A CITRATE DID NOT ACCOUNT FOR ALL OF THE REMARK 3 OBSERVED DENSITY, AN UNIDENTIFIED LIGAND (UNL) WAS MODELED AT REMARK 3 THIS LOCATION INSTEAD. 5. ETHYLENE GLYCOL (EDO) AND A REMARK 3 POLYETHYLENE GLYCOL (PEG) FRAGMENT FROM THE CRYSTALLIZATION/ REMARK 3 CRYOPROTECTANT SOLUTIONS HAVE BEEN MODELED INTO THE SOLVENT REMARK 3 STRUCTURE. 6. TLS GROUPS WERE ASSIGNED WITH THE AID OF THE TLSMD REMARK 3 SERVER. REMARK 4 REMARK 4 3HRG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-JUN-09. REMARK 100 THE DEPOSITION ID IS D_1000053492. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-MAR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91162,0.97932,0.97918 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : FLAT COLLIMATING MIRROR, TOROID REMARK 200 FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25125 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 29.579 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 3.580 REMARK 200 R MERGE (I) : 0.03800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.44500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHELXD, AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2000M K3CITRATE, 20.0000% PEG-3350, REMARK 280 NO BUFFER PH 8.3, NANODROP, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 32.35300 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.59050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.35300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 45.59050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: ANALYTICAL SIZE EXCLUSION CHROMATOGRAPHY SUPPORTS THE REMARK 300 ASSIGNMENT OF A MONOMER AS A SIGNIFICANT OLIGOMERIZATION STATE IN REMARK 300 SOLUTION. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE A 37 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 39 CG CD CE NZ REMARK 470 LYS A 100 CE NZ REMARK 470 LYS A 112 CD CE NZ REMARK 470 LYS A 113 CG CD CE NZ REMARK 470 ARG A 178 CZ NH1 NH2 REMARK 470 LYS A 224 NZ REMARK 470 ASN A 245 CG OD1 ND2 REMARK 470 GLN A 250 CG CD OE1 NE2 REMARK 470 LEU A 253 CG CD1 CD2 REMARK 470 THR A 254 OG1 CG2 REMARK 470 GLU A 256 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 189 CA - CB - SG ANGL. DEV. = 6.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MSE A 1 135.78 -36.90 REMARK 500 ASP A 31 72.80 59.77 REMARK 500 ASP A 31 72.80 55.80 REMARK 500 ASN A 103 45.53 -89.80 REMARK 500 ASN A 158 30.89 -83.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PEG A 259 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNL A 257 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 258 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 259 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 396692 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 SEQUENCE THIS CONSTRUCT (1-256) WAS EXPRESSED WITH THE PURIFICATION REMARK 999 TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 3HRG A 1 256 UNP Q8A0P1 Q8A0P1_BACTN 1 256 SEQADV 3HRG GLY A 0 UNP Q8A0P1 EXPRESSION TAG SEQRES 1 A 257 GLY MSE ILE ASP PHE THR LYS SER LYS GLN TYR THR LEU SEQRES 2 A 257 SER ILE ARG LEU SER THR ASP GLY PHE SER PHE SER ILE SEQRES 3 A 257 TYR ASN PRO ILE ASN ASP ASN SER GLN SER LEU PHE GLU SEQRES 4 A 257 LYS GLU VAL ASP THR SER LEU SER LEU THR ALA ASN LEU SEQRES 5 A 257 LYS ASN VAL PHE HIS GLU SER ASP PHE LEU SER TYR SER SEQRES 6 A 257 TYR LYS ARG VAL ASN ILE MSE ILE ALA SER LYS ARG PHE SEQRES 7 A 257 THR MSE ILE PRO LEU GLU LEU PHE GLU GLU GLU GLN ALA SEQRES 8 A 257 GLU LEU LEU PHE TYR HIS ASN HIS GLN LYS ARG GLU ASN SEQRES 9 A 257 GLU ILE VAL MSE TYR ASN ILE LEU LYS LYS ASN ASN VAL SEQRES 10 A 257 VAL ILE ILE PHE GLY ILE ASP LYS SER THR TYR THR PHE SEQRES 11 A 257 LEU ASN GLU GLN TYR PRO GLU ALA ARG PHE TYR SER GLN SEQRES 12 A 257 SER THR PRO LEU ILE GLU TYR PHE SER ILE LYS SER ARG SEQRES 13 A 257 LEU GLY ASN SER LYS LYS MSE TYR ALA SER VAL ARG LYS SEQRES 14 A 257 ASP ALA ILE ASP ILE TYR CYS PHE GLU ARG GLY GLN LEU SEQRES 15 A 257 LEU LEU ALA ASN SER PHE GLU CYS MSE GLN THR GLU ASP SEQRES 16 A 257 ARG ILE TYR TYR LEU LEU TYR VAL TRP LYS GLN LEU GLU SEQRES 17 A 257 PHE ASN GLN GLU ARG ASP GLU LEU HIS LEU THR GLY THR SEQRES 18 A 257 LEU SER ASP LYS GLU THR LEU MSE ASN GLU LEU LYS LYS SEQRES 19 A 257 PHE ILE LEU GLN VAL PHE ILE MSE ASN PRO ALA ASN ASN SEQRES 20 A 257 ILE ASP MSE GLN ALA LEU LEU THR CYS GLU MODRES 3HRG MSE A 1 MET SELENOMETHIONINE MODRES 3HRG MSE A 71 MET SELENOMETHIONINE MODRES 3HRG MSE A 79 MET SELENOMETHIONINE MODRES 3HRG MSE A 107 MET SELENOMETHIONINE MODRES 3HRG MSE A 162 MET SELENOMETHIONINE MODRES 3HRG MSE A 190 MET SELENOMETHIONINE MODRES 3HRG MSE A 228 MET SELENOMETHIONINE MODRES 3HRG MSE A 241 MET SELENOMETHIONINE MODRES 3HRG MSE A 249 MET SELENOMETHIONINE HET MSE A 1 13 HET MSE A 71 18 HET MSE A 79 8 HET MSE A 107 13 HET MSE A 162 8 HET MSE A 190 16 HET MSE A 228 8 HET MSE A 241 8 HET MSE A 249 8 HET UNL A 257 10 HET EDO A 258 4 HET PEG A 259 5 HETNAM MSE SELENOMETHIONINE HETNAM UNL UNKNOWN LIGAND HETNAM EDO 1,2-ETHANEDIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 9(C5 H11 N O2 SE) FORMUL 3 EDO C2 H6 O2 FORMUL 4 PEG C4 H10 O3 FORMUL 5 HOH *246(H2 O) HELIX 1 1 ASP A 3 GLN A 9 5 7 HELIX 2 2 SER A 46 SER A 58 1 13 HELIX 3 3 ASP A 59 TYR A 63 5 5 HELIX 4 4 GLU A 83 PHE A 85 5 3 HELIX 5 5 GLU A 86 GLU A 88 5 3 HELIX 6 6 GLN A 89 HIS A 96 1 8 HELIX 7 7 LYS A 124 TYR A 134 1 11 HELIX 8 8 GLN A 142 SER A 154 1 13 HELIX 9 9 GLN A 191 LEU A 206 1 16 HELIX 10 10 ASP A 223 ILE A 235 1 13 HELIX 11 11 ASN A 246 CYS A 255 1 10 SHEET 1 A 5 ASN A 32 LYS A 39 0 SHEET 2 A 5 PHE A 21 ASN A 27 -1 N ASN A 27 O ASN A 32 SHEET 3 A 5 THR A 11 LEU A 16 -1 N ARG A 15 O SER A 22 SHEET 4 A 5 ARG A 67 ILE A 72 1 O MSE A 71 N ILE A 14 SHEET 5 A 5 ARG A 138 SER A 141 1 O TYR A 140 N ILE A 70 SHEET 1 B 3 PHE A 77 PRO A 81 0 SHEET 2 B 3 VAL A 116 ASP A 123 -1 O ILE A 119 N THR A 78 SHEET 3 B 3 GLU A 104 LEU A 111 -1 N LEU A 111 O VAL A 116 SHEET 1 C 5 GLN A 180 GLU A 188 0 SHEET 2 C 5 ALA A 170 GLU A 177 -1 N ILE A 173 O ASN A 185 SHEET 3 C 5 LYS A 161 VAL A 166 -1 N TYR A 163 O TYR A 174 SHEET 4 C 5 GLU A 214 GLY A 219 1 O THR A 218 N VAL A 166 SHEET 5 C 5 VAL A 238 ILE A 240 1 O PHE A 239 N LEU A 215 LINK C AGLY A 0 N MSE A 1 1555 1555 1.35 LINK C BGLY A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N ILE A 2 1555 1555 1.32 LINK C ILE A 70 N MSE A 71 1555 1555 1.35 LINK C MSE A 71 N ILE A 72 1555 1555 1.33 LINK C THR A 78 N MSE A 79 1555 1555 1.33 LINK C MSE A 79 N ILE A 80 1555 1555 1.34 LINK C VAL A 106 N MSE A 107 1555 1555 1.34 LINK C MSE A 107 N TYR A 108 1555 1555 1.32 LINK C LYS A 161 N MSE A 162 1555 1555 1.33 LINK C MSE A 162 N TYR A 163 1555 1555 1.33 LINK C CYS A 189 N AMSE A 190 1555 1555 1.34 LINK C CYS A 189 N BMSE A 190 1555 1555 1.32 LINK C AMSE A 190 N GLN A 191 1555 1555 1.34 LINK C BMSE A 190 N GLN A 191 1555 1555 1.33 LINK C LEU A 227 N MSE A 228 1555 1555 1.34 LINK C MSE A 228 N ASN A 229 1555 1555 1.33 LINK C ILE A 240 N MSE A 241 1555 1555 1.32 LINK C MSE A 241 N ASN A 242 1555 1555 1.33 LINK C ASP A 248 N MSE A 249 1555 1555 1.34 LINK C MSE A 249 N GLN A 250 1555 1555 1.34 CISPEP 1 ASN A 242 PRO A 243 0 0.37 SITE 1 AC1 11 THR A 18 LEU A 47 SER A 74 LYS A 75 SITE 2 AC1 11 ARG A 101 ARG A 167 ASP A 169 ALA A 170 SITE 3 AC1 11 HOH A 277 HOH A 396 HOH A 478 SITE 1 AC2 8 TYR A 65 VAL A 68 TYR A 134 PRO A 135 SITE 2 AC2 8 GLU A 136 HOH A 316 HOH A 414 HOH A 422 SITE 1 AC3 8 TYR A 95 HIS A 96 ASN A 97 HIS A 98 SITE 2 AC3 8 GLN A 99 HOH A 355 HOH A 385 HOH A 499 CRYST1 64.706 91.181 48.620 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015455 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010967 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020568 0.00000