HEADER TRANSCRIPTION 09-JUN-09 3HRU TITLE CRYSTAL STRUCTURE OF SCAR WITH BOUND ZN2+ COMPND MOL_ID: 1; COMPND 2 MOLECULE: METALLOREGULATOR SCAR; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS GORDONII; SOURCE 3 ORGANISM_TAXID: 1302; SOURCE 4 GENE: SCAR; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET11 KEYWDS DTXR/MNTR FAMILY MEMBER, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR K.E.STOLL,W.E.DRAPER,J.I.KLIEGMAN,M.V.GOLYNSKIY,R.A.T.BREW-APPIAH, AUTHOR 2 H.K.BROWN,W.A.BREYER,N.S.JAKUBOVICS,H.F.JENKINSON,R.B.BRENNAN, AUTHOR 3 S.M.COHEN,A.GLASFELD REVDAT 3 06-SEP-23 3HRU 1 REMARK REVDAT 2 10-NOV-09 3HRU 1 JRNL REVDAT 1 23-JUN-09 3HRU 0 JRNL AUTH K.E.STOLL,W.E.DRAPER,J.I.KLIEGMAN,M.V.GOLYNSKIY, JRNL AUTH 2 R.A.BREW-APPIAH,R.K.PHILLIPS,H.K.BROWN,W.A.BREYER, JRNL AUTH 3 N.S.JAKUBOVICS,H.F.JENKINSON,R.G.BRENNAN,S.M.COHEN, JRNL AUTH 4 A.GLASFELD JRNL TITL CHARACTERIZATION AND STRUCTURE OF THE MANGANESE-RESPONSIVE JRNL TITL 2 TRANSCRIPTIONAL REGULATOR SCAR. JRNL REF BIOCHEMISTRY V. 48 10308 2009 JRNL REFN ISSN 0006-2960 JRNL PMID 19795834 JRNL DOI 10.1021/BI900980G REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.99 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 3 NUMBER OF REFLECTIONS : 17233 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.292 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.940 REMARK 3 FREE R VALUE TEST SET COUNT : 1713 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.9900 - 8.8490 0.89 592 0 0.1980 0.0000 REMARK 3 2 8.8490 - 7.1280 0.89 555 0 0.2140 0.0000 REMARK 3 3 7.1280 - 6.2590 0.90 549 0 0.2650 0.0000 REMARK 3 4 6.2590 - 5.7010 0.88 537 0 0.2180 0.0000 REMARK 3 5 5.7010 - 5.3000 0.89 524 0 0.2470 0.0000 REMARK 3 6 5.3000 - 4.9930 0.91 527 0 0.1880 0.0000 REMARK 3 7 4.9930 - 4.7470 0.91 529 0 0.1700 0.0000 REMARK 3 8 4.7470 - 4.5420 0.90 532 0 0.1750 0.0000 REMARK 3 9 4.5420 - 4.3690 0.90 524 0 0.1550 0.0000 REMARK 3 10 4.3690 - 4.2200 0.91 521 0 0.1700 0.0000 REMARK 3 11 4.2200 - 4.0890 0.90 531 0 0.1890 0.0000 REMARK 3 12 4.0890 - 3.9730 0.90 500 0 0.2010 0.0000 REMARK 3 13 3.9730 - 3.8690 0.90 522 0 0.2250 0.0000 REMARK 3 14 3.8690 - 3.7760 0.90 520 0 0.2130 0.0000 REMARK 3 15 3.7760 - 3.6900 0.88 498 0 0.2220 0.0000 REMARK 3 16 3.6900 - 3.6120 0.89 508 0 0.2060 0.0000 REMARK 3 17 3.6120 - 3.5400 0.88 490 0 0.2420 0.0000 REMARK 3 18 3.5400 - 3.4740 0.88 514 0 0.2700 0.0000 REMARK 3 19 3.4740 - 3.4120 0.89 501 0 0.2650 0.0000 REMARK 3 20 3.4120 - 3.3550 0.90 491 0 0.2730 0.0000 REMARK 3 21 3.3550 - 3.3010 0.90 525 0 0.2630 0.0000 REMARK 3 22 3.3010 - 3.2500 0.90 506 0 0.2700 0.0000 REMARK 3 23 3.2500 - 3.2030 0.89 495 0 0.2940 0.0000 REMARK 3 24 3.2030 - 3.1580 0.90 511 0 0.3210 0.0000 REMARK 3 25 3.1580 - 3.1150 0.87 488 0 0.3120 0.0000 REMARK 3 26 3.1150 - 3.0750 0.86 464 0 0.3360 0.0000 REMARK 3 27 3.0750 - 3.0370 0.78 446 0 0.3580 0.0000 REMARK 3 28 3.0370 - 3.0000 0.76 436 0 0.3380 0.0000 REMARK 3 29 3.0000 - 2.9650 0.77 426 0 0.3310 0.0000 REMARK 3 30 2.9650 - 2.9320 0.71 388 0 0.3410 0.0000 REMARK 3 31 2.9320 - 2.9000 0.63 370 0 0.3370 0.0000 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : 0.26 REMARK 3 B_SOL : 40.73 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 106.7 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 6.86200 REMARK 3 B22 (A**2) : 6.86200 REMARK 3 B33 (A**2) : -13.72400 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 NULL REMARK 3 ANGLE : 1.411 NULL REMARK 3 CHIRALITY : 0.088 NULL REMARK 3 PLANARITY : 0.004 NULL REMARK 3 DIHEDRAL : 22.258 NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 3:70) REMARK 3 ORIGIN FOR THE GROUP (A): 76.0681 113.6227 28.6221 REMARK 3 T TENSOR REMARK 3 T11: 0.8619 T22: 0.2594 REMARK 3 T33: 0.6608 T12: -0.1313 REMARK 3 T13: -0.0829 T23: 0.0130 REMARK 3 L TENSOR REMARK 3 L11: 1.0856 L22: 3.6692 REMARK 3 L33: 1.4164 L12: 1.1173 REMARK 3 L13: -0.3319 L23: 0.7125 REMARK 3 S TENSOR REMARK 3 S11: 0.1830 S12: 0.4238 S13: 0.0179 REMARK 3 S21: -0.4158 S22: -0.2443 S23: 0.5781 REMARK 3 S31: 0.3306 S32: -0.2564 S33: -0.0003 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 71:140) REMARK 3 ORIGIN FOR THE GROUP (A): 86.0678 96.3675 39.4608 REMARK 3 T TENSOR REMARK 3 T11: 0.7601 T22: 0.1131 REMARK 3 T33: 0.5624 T12: -0.0304 REMARK 3 T13: 0.0932 T23: -0.0196 REMARK 3 L TENSOR REMARK 3 L11: 2.2556 L22: 1.6819 REMARK 3 L33: 3.8015 L12: 0.4101 REMARK 3 L13: -0.6329 L23: -1.7692 REMARK 3 S TENSOR REMARK 3 S11: 0.0866 S12: 0.0595 S13: 0.1823 REMARK 3 S21: 0.0176 S22: 0.0451 S23: 0.0347 REMARK 3 S31: -0.4967 S32: 0.2017 S33: -0.0002 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 141:215) REMARK 3 ORIGIN FOR THE GROUP (A): 81.7037 88.3927 16.8124 REMARK 3 T TENSOR REMARK 3 T11: 1.1580 T22: 0.6923 REMARK 3 T33: 0.6887 T12: 0.2724 REMARK 3 T13: -0.2544 T23: -0.1449 REMARK 3 L TENSOR REMARK 3 L11: 4.6360 L22: 2.5740 REMARK 3 L33: 2.9918 L12: 1.7450 REMARK 3 L13: -0.8644 L23: 0.1626 REMARK 3 S TENSOR REMARK 3 S11: 0.9789 S12: 1.5938 S13: -0.5207 REMARK 3 S21: 0.2419 S22: -0.0830 S23: 0.3075 REMARK 3 S31: 0.1158 S32: -0.3172 S33: -0.0025 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN B AND RESID 6:15) REMARK 3 ORIGIN FOR THE GROUP (A): 68.6467 95.9205 69.6616 REMARK 3 T TENSOR REMARK 3 T11: 2.0935 T22: 0.7848 REMARK 3 T33: 0.8164 T12: 0.0516 REMARK 3 T13: 0.5477 T23: -0.0016 REMARK 3 L TENSOR REMARK 3 L11: -0.0845 L22: -0.1036 REMARK 3 L33: 0.2950 L12: 0.0481 REMARK 3 L13: -0.0890 L23: 0.0125 REMARK 3 S TENSOR REMARK 3 S11: 0.0030 S12: -0.9916 S13: 0.8945 REMARK 3 S21: -0.6211 S22: 0.8495 S23: -0.3206 REMARK 3 S31: -0.5883 S32: 0.3856 S33: -0.0006 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN B AND RESID 16:49) REMARK 3 ORIGIN FOR THE GROUP (A): 62.4634 98.6626 73.6996 REMARK 3 T TENSOR REMARK 3 T11: 2.0505 T22: 1.0729 REMARK 3 T33: 1.3804 T12: -0.0341 REMARK 3 T13: 0.0856 T23: 0.0320 REMARK 3 L TENSOR REMARK 3 L11: -0.1977 L22: -0.1901 REMARK 3 L33: 0.4521 L12: -0.7146 REMARK 3 L13: -0.0198 L23: 0.6526 REMARK 3 S TENSOR REMARK 3 S11: -0.3095 S12: -0.1879 S13: 0.5776 REMARK 3 S21: 0.1974 S22: 0.4708 S23: -0.5145 REMARK 3 S31: -0.6227 S32: 0.0133 S33: -0.0011 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN B AND RESID 50:97) REMARK 3 ORIGIN FOR THE GROUP (A): 76.1204 92.6029 64.8776 REMARK 3 T TENSOR REMARK 3 T11: 1.3742 T22: 0.4587 REMARK 3 T33: 0.6572 T12: -0.1498 REMARK 3 T13: 0.1760 T23: -0.0506 REMARK 3 L TENSOR REMARK 3 L11: 1.0979 L22: -0.6113 REMARK 3 L33: 1.9924 L12: -0.0701 REMARK 3 L13: -0.0980 L23: -0.5447 REMARK 3 S TENSOR REMARK 3 S11: 0.7102 S12: -0.6565 S13: 0.1108 REMARK 3 S21: 0.9554 S22: -0.2272 S23: -0.1549 REMARK 3 S31: -0.5906 S32: -0.1880 S33: 0.0001 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN B AND RESID 98:140) REMARK 3 ORIGIN FOR THE GROUP (A): 80.5035 86.8405 59.4883 REMARK 3 T TENSOR REMARK 3 T11: 1.2987 T22: 0.4957 REMARK 3 T33: 0.6232 T12: -0.2400 REMARK 3 T13: 0.0804 T23: 0.0051 REMARK 3 L TENSOR REMARK 3 L11: 0.8113 L22: 1.0238 REMARK 3 L33: 2.1398 L12: 1.8125 REMARK 3 L13: -1.3146 L23: -0.5104 REMARK 3 S TENSOR REMARK 3 S11: 0.4579 S12: -0.6782 S13: 0.1130 REMARK 3 S21: 0.4391 S22: -0.3760 S23: 0.1153 REMARK 3 S31: 0.7632 S32: -0.2226 S33: 0.0012 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN B AND RESID 141:215) REMARK 3 ORIGIN FOR THE GROUP (A): 90.7033 96.1244 81.5612 REMARK 3 T TENSOR REMARK 3 T11: 1.1846 T22: 1.2141 REMARK 3 T33: 0.7168 T12: -0.2018 REMARK 3 T13: 0.0942 T23: -0.2104 REMARK 3 L TENSOR REMARK 3 L11: 1.3783 L22: 3.0835 REMARK 3 L33: 1.0635 L12: 0.1056 REMARK 3 L13: 1.1032 L23: -1.0587 REMARK 3 S TENSOR REMARK 3 S11: 0.2159 S12: -0.7899 S13: 0.3298 REMARK 3 S21: 0.6195 S22: -0.0349 S23: 0.4282 REMARK 3 S31: -0.3750 S32: -0.0850 S33: -0.0003 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3HRU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-JUN-09. REMARK 100 THE DEPOSITION ID IS D_1000053506. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-FEB-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 4.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.2131 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NOIR-1 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK REMARK 200 DATA SCALING SOFTWARE : D*TREK 9.4LDZ REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17514 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 49.990 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 200 DATA REDUNDANCY : 6.170 REMARK 200 R MERGE (I) : 0.07100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.28 REMARK 200 R MERGE FOR SHELL (I) : 0.44900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 3HRS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6 M LITHIUM SULFATE, 0.05 M SODIUM REMARK 280 CACODYLATE IN THE PRESENCE OF 1 MM MNCL2 AND 1 MM DUPLEX DNA, PH REMARK 280 6.0, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 150.95000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 35.35000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 35.35000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 75.47500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 35.35000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 35.35000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 226.42500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 35.35000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 35.35000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 75.47500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 35.35000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 35.35000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 226.42500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 150.95000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2500 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -150.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 2 REMARK 465 ARG A 18 REMARK 465 HIS A 19 REMARK 465 THR B 2 REMARK 465 PRO B 3 REMARK 465 ASN B 4 REMARK 465 LYS B 5 REMARK 465 ARG B 18 REMARK 465 HIS B 19 REMARK 465 SER B 34 REMARK 465 PRO B 35 REMARK 465 PRO B 36 REMARK 465 ALA B 37 REMARK 465 VAL B 38 REMARK 465 THR B 39 REMARK 465 GLU B 40 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 11 -71.02 -53.43 REMARK 500 THR A 104 -55.47 -127.66 REMARK 500 SER A 106 -176.32 -64.34 REMARK 500 ALA A 122 134.91 -177.32 REMARK 500 LYS A 148 -72.74 -63.60 REMARK 500 ASN A 161 106.65 -9.87 REMARK 500 ARG A 170 40.58 -84.93 REMARK 500 ASN A 171 5.95 -177.70 REMARK 500 ASP A 196 43.80 71.62 REMARK 500 GLN B 32 105.05 67.48 REMARK 500 MET B 42 -64.42 26.09 REMARK 500 LEU B 66 -24.71 -30.54 REMARK 500 TYR B 89 152.28 -44.33 REMARK 500 LYS B 148 -66.70 -127.12 REMARK 500 TYR B 153 -169.92 -127.93 REMARK 500 HIS B 189 31.74 82.71 REMARK 500 LYS B 214 -107.00 -57.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 216 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 80 OE1 REMARK 620 2 CYS A 123 SG 129.7 REMARK 620 3 ASP A 160 OD2 73.7 153.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 216 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 80 OE1 REMARK 620 2 CYS B 123 SG 81.8 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 216 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 216 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 217 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 218 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 217 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 219 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3HRT RELATED DB: PDB REMARK 900 SAME PROTEIN IN PRESENCE OF CD2+ REMARK 900 RELATED ID: 3HRS RELATED DB: PDB REMARK 900 SAME PROTEIN DBREF 3HRU A 2 215 UNP Q9RFN3 Q9RFN3_STRGN 2 215 DBREF 3HRU B 2 215 UNP Q9RFN3 Q9RFN3_STRGN 2 215 SEQRES 1 A 214 THR PRO ASN LYS GLU ASP TYR LEU LYS CYS LEU TYR GLU SEQRES 2 A 214 LEU GLY THR ARG HIS ASN LYS ILE THR ASN LYS GLU ILE SEQRES 3 A 214 ALA GLN LEU MET GLN VAL SER PRO PRO ALA VAL THR GLU SEQRES 4 A 214 MET MET LYS LYS LEU LEU ALA GLU GLU LEU LEU ILE LYS SEQRES 5 A 214 ASP LYS LYS ALA GLY TYR LEU LEU THR ASP LEU GLY LEU SEQRES 6 A 214 LYS LEU VAL SER ASP LEU TYR ARG LYS HIS ARG LEU ILE SEQRES 7 A 214 GLU VAL PHE LEU VAL HIS HIS LEU GLY TYR THR THR GLU SEQRES 8 A 214 GLU ILE HIS GLU GLU ALA GLU VAL LEU GLU HIS THR VAL SEQRES 9 A 214 SER ASP HIS PHE VAL GLU ARG LEU ASP GLN LEU LEU ASP SEQRES 10 A 214 TYR PRO LYS ALA CYS PRO HIS GLY GLY THR ILE PRO ALA SEQRES 11 A 214 LYS GLY GLU LEU LEU VAL GLU LYS HIS LYS LEU THR LEU SEQRES 12 A 214 GLU GLU ALA LYS GLU LYS GLY ASP TYR ILE LEU ALA ARG SEQRES 13 A 214 VAL HIS ASP ASN PHE ASP LEU LEU THR TYR LEU GLU ARG SEQRES 14 A 214 ASN GLY LEU GLN VAL GLY LYS THR ILE ARG PHE LEU GLY SEQRES 15 A 214 TYR ASP ASP PHE SER HIS LEU TYR SER LEU GLU VAL ASP SEQRES 16 A 214 GLY GLN GLU ILE GLN LEU ALA GLN PRO ILE ALA GLN GLN SEQRES 17 A 214 ILE TYR VAL GLU LYS ILE SEQRES 1 B 214 THR PRO ASN LYS GLU ASP TYR LEU LYS CYS LEU TYR GLU SEQRES 2 B 214 LEU GLY THR ARG HIS ASN LYS ILE THR ASN LYS GLU ILE SEQRES 3 B 214 ALA GLN LEU MET GLN VAL SER PRO PRO ALA VAL THR GLU SEQRES 4 B 214 MET MET LYS LYS LEU LEU ALA GLU GLU LEU LEU ILE LYS SEQRES 5 B 214 ASP LYS LYS ALA GLY TYR LEU LEU THR ASP LEU GLY LEU SEQRES 6 B 214 LYS LEU VAL SER ASP LEU TYR ARG LYS HIS ARG LEU ILE SEQRES 7 B 214 GLU VAL PHE LEU VAL HIS HIS LEU GLY TYR THR THR GLU SEQRES 8 B 214 GLU ILE HIS GLU GLU ALA GLU VAL LEU GLU HIS THR VAL SEQRES 9 B 214 SER ASP HIS PHE VAL GLU ARG LEU ASP GLN LEU LEU ASP SEQRES 10 B 214 TYR PRO LYS ALA CYS PRO HIS GLY GLY THR ILE PRO ALA SEQRES 11 B 214 LYS GLY GLU LEU LEU VAL GLU LYS HIS LYS LEU THR LEU SEQRES 12 B 214 GLU GLU ALA LYS GLU LYS GLY ASP TYR ILE LEU ALA ARG SEQRES 13 B 214 VAL HIS ASP ASN PHE ASP LEU LEU THR TYR LEU GLU ARG SEQRES 14 B 214 ASN GLY LEU GLN VAL GLY LYS THR ILE ARG PHE LEU GLY SEQRES 15 B 214 TYR ASP ASP PHE SER HIS LEU TYR SER LEU GLU VAL ASP SEQRES 16 B 214 GLY GLN GLU ILE GLN LEU ALA GLN PRO ILE ALA GLN GLN SEQRES 17 B 214 ILE TYR VAL GLU LYS ILE HET ZN A 216 1 HET SO4 A 217 5 HET SO4 A 218 5 HET SO4 A 219 5 HET ZN B 216 1 HET SO4 B 217 5 HETNAM ZN ZINC ION HETNAM SO4 SULFATE ION FORMUL 3 ZN 2(ZN 2+) FORMUL 4 SO4 4(O4 S 2-) FORMUL 9 HOH *4(H2 O) HELIX 1 1 ASN A 4 GLY A 16 1 13 HELIX 2 2 THR A 23 MET A 31 1 9 HELIX 3 3 SER A 34 GLU A 48 1 15 HELIX 4 4 THR A 62 GLY A 88 1 27 HELIX 5 5 THR A 90 HIS A 103 1 14 HELIX 6 6 SER A 106 LEU A 117 1 12 HELIX 7 7 ASN A 161 ARG A 170 1 10 HELIX 8 8 ALA A 203 GLN A 208 1 6 HELIX 9 9 GLU B 6 LEU B 15 1 10 HELIX 10 10 THR B 23 GLN B 32 1 10 HELIX 11 11 MET B 42 GLU B 48 1 7 HELIX 12 12 THR B 62 HIS B 86 1 25 HELIX 13 13 THR B 90 HIS B 103 1 14 HELIX 14 14 SER B 106 LEU B 117 1 12 HELIX 15 15 ASN B 161 ASN B 171 1 11 HELIX 16 16 ALA B 203 GLN B 208 1 6 SHEET 1 A 2 LEU A 51 ASP A 54 0 SHEET 2 A 2 GLY A 58 LEU A 61 -1 O LEU A 60 N ILE A 52 SHEET 1 B 5 GLU A 199 LEU A 202 0 SHEET 2 B 5 TYR A 191 GLU A 194 -1 N TYR A 191 O LEU A 202 SHEET 3 B 5 THR A 178 TYR A 184 -1 N ARG A 180 O GLU A 194 SHEET 4 B 5 GLY A 151 ARG A 157 -1 N TYR A 153 O ILE A 179 SHEET 5 B 5 TYR A 211 LYS A 214 -1 O TYR A 211 N ARG A 157 SHEET 1 C 2 LEU B 51 LYS B 53 0 SHEET 2 C 2 TYR B 59 LEU B 61 -1 O LEU B 60 N ILE B 52 SHEET 1 D 5 GLN B 198 LEU B 202 0 SHEET 2 D 5 TYR B 191 VAL B 195 -1 N VAL B 195 O GLN B 198 SHEET 3 D 5 THR B 178 TYR B 184 -1 N ARG B 180 O GLU B 194 SHEET 4 D 5 ASP B 152 VAL B 158 -1 N TYR B 153 O ILE B 179 SHEET 5 D 5 ILE B 210 GLU B 213 -1 O TYR B 211 N ALA B 156 LINK OE1 GLU A 80 ZN ZN A 216 1555 1555 2.05 LINK SG CYS A 123 ZN ZN A 216 1555 1555 2.45 LINK OD2 ASP A 160 ZN ZN A 216 1555 1555 2.35 LINK OE1 GLU B 80 ZN ZN B 216 1555 1555 2.21 LINK SG CYS B 123 ZN ZN B 216 1555 1555 2.43 SITE 1 AC1 4 GLU A 80 CYS A 123 HIS A 125 ASP A 160 SITE 1 AC2 4 GLU B 80 CYS B 123 HIS B 125 ASP B 160 SITE 1 AC3 4 ARG A 77 ARG A 157 HIS A 159 ASP A 160 SITE 1 AC4 2 HIS A 95 PHE A 162 SITE 1 AC5 6 GLU B 14 ARG B 77 ARG B 157 VAL B 158 SITE 2 AC5 6 HIS B 159 ASP B 160 SITE 1 AC6 2 ARG A 112 GLN A 115 CRYST1 70.700 70.700 301.900 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014144 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014144 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003312 0.00000