HEADER PROTEIN BINDING 10-JUN-09 3HSH TITLE CRYSTAL STRUCTURE OF HUMAN COLLAGEN XVIII TRIMERIZATION DOMAIN TITLE 2 (TETRAGONAL CRYSTAL FORM) COMPND MOL_ID: 1; COMPND 2 MOLECULE: COLLAGEN ALPHA-1(XVIII) CHAIN; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 FRAGMENT: UNP RESIDUES 1441-1496; COMPND 5 SYNONYM: ENDOSTATIN; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: COL18A1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET23D(+) KEYWDS COLLAGEN, EXTRACELLULAR MATRIX, BASEMENT MEMBRANE, COLLAGEN XVIII, KEYWDS 2 TRIMERIZATION DOMAIN, FOLDING, ASSOCIATION, CHAIN SELECTION, KEYWDS 3 ENDOSTATIN, TRIPLE HELIX, ALTERNATIVE PROMOTER USAGE, CELL ADHESION, KEYWDS 4 DISULFIDE BOND, GLYCOPROTEIN, HYDROXYLATION, METAL-BINDING, KEYWDS 5 SECRETED, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR S.P.BOUDKO,H.P.BACHINGER REVDAT 6 21-FEB-24 3HSH 1 REMARK REVDAT 5 13-OCT-21 3HSH 1 REMARK SEQADV REVDAT 4 01-NOV-17 3HSH 1 REMARK REVDAT 3 13-JUL-11 3HSH 1 VERSN REVDAT 2 13-OCT-09 3HSH 1 JRNL REVDAT 1 11-AUG-09 3HSH 0 JRNL AUTH S.P.BOUDKO,T.SASAKI,J.ENGEL,T.F.LERCH,J.NIX,M.S.CHAPMAN, JRNL AUTH 2 H.P.BACHINGER JRNL TITL CRYSTAL STRUCTURE OF HUMAN COLLAGEN XVIII TRIMERIZATION JRNL TITL 2 DOMAIN: A NOVEL COLLAGEN TRIMERIZATION FOLD. JRNL REF J.MOL.BIOL. V. 392 787 2009 JRNL REFN ISSN 0022-2836 JRNL PMID 19631658 JRNL DOI 10.1016/J.JMB.2009.07.057 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.52 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 33423 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.980 REMARK 3 FREE R VALUE TEST SET COUNT : 3336 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.5346 - 5.1888 0.98 1393 156 0.2161 0.2652 REMARK 3 2 5.1888 - 4.1198 1.00 1307 156 0.1464 0.1923 REMARK 3 3 4.1198 - 3.5994 1.00 1298 138 0.1522 0.2216 REMARK 3 4 3.5994 - 3.2705 1.00 1277 137 0.1478 0.1816 REMARK 3 5 3.2705 - 3.0361 1.00 1282 139 0.1689 0.2099 REMARK 3 6 3.0361 - 2.8572 1.00 1252 149 0.1830 0.2451 REMARK 3 7 2.8572 - 2.7141 1.00 1279 125 0.1814 0.2113 REMARK 3 8 2.7141 - 2.5960 1.00 1270 111 0.1852 0.2234 REMARK 3 9 2.5960 - 2.4961 1.00 1240 153 0.1797 0.2362 REMARK 3 10 2.4961 - 2.4100 1.00 1234 137 0.1716 0.2174 REMARK 3 11 2.4100 - 2.3346 1.00 1243 150 0.1649 0.2235 REMARK 3 12 2.3346 - 2.2679 1.00 1223 164 0.1749 0.2356 REMARK 3 13 2.2679 - 2.2082 1.00 1234 132 0.1615 0.2058 REMARK 3 14 2.2082 - 2.1543 1.00 1240 143 0.1645 0.2281 REMARK 3 15 2.1543 - 2.1053 1.00 1227 136 0.1588 0.2104 REMARK 3 16 2.1053 - 2.0605 1.00 1246 128 0.1618 0.2143 REMARK 3 17 2.0605 - 2.0193 1.00 1258 129 0.1769 0.2401 REMARK 3 18 2.0193 - 1.9812 1.00 1227 119 0.1681 0.2308 REMARK 3 19 1.9812 - 1.9458 1.00 1246 126 0.1750 0.2426 REMARK 3 20 1.9458 - 1.9129 1.00 1210 159 0.1831 0.2175 REMARK 3 21 1.9129 - 1.8820 1.00 1200 160 0.1837 0.2556 REMARK 3 22 1.8820 - 1.8530 1.00 1251 125 0.1749 0.2322 REMARK 3 23 1.8530 - 1.8258 1.00 1231 131 0.1878 0.2053 REMARK 3 24 1.8258 - 1.8000 0.99 1219 133 0.1997 0.2640 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.38 REMARK 3 B_SOL : 62.68 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A OR CHAIN B OR CHAIN C REMARK 3 ORIGIN FOR THE GROUP (A): 19.1144 20.9890 16.0246 REMARK 3 T TENSOR REMARK 3 T11: 0.0461 T22: 0.0568 REMARK 3 T33: 0.0951 T12: 0.0034 REMARK 3 T13: -0.0002 T23: 0.0174 REMARK 3 L TENSOR REMARK 3 L11: 0.4323 L22: 0.6947 REMARK 3 L33: 0.5582 L12: 0.0374 REMARK 3 L13: -0.2314 L23: 0.0250 REMARK 3 S TENSOR REMARK 3 S11: 0.0026 S12: -0.0400 S13: -0.0161 REMARK 3 S21: 0.0275 S22: -0.0098 S23: 0.0050 REMARK 3 S31: 0.0251 S32: 0.0442 S33: 0.0147 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN D OR CHAIN E OR CHAIN F REMARK 3 ORIGIN FOR THE GROUP (A): 19.0213 21.0147 50.3322 REMARK 3 T TENSOR REMARK 3 T11: 0.3656 T22: 0.5008 REMARK 3 T33: 0.1040 T12: 0.0451 REMARK 3 T13: 0.0196 T23: 0.1143 REMARK 3 L TENSOR REMARK 3 L11: 1.0430 L22: 0.7417 REMARK 3 L33: -0.5096 L12: 0.2641 REMARK 3 L13: 0.2686 L23: -0.0844 REMARK 3 S TENSOR REMARK 3 S11: 0.0432 S12: -0.6209 S13: -0.1532 REMARK 3 S21: 0.3354 S22: -0.0567 S23: -0.0775 REMARK 3 S31: 0.0811 S32: -0.0795 S33: 0.0124 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3HSH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JUN-09. REMARK 100 THE DEPOSITION ID IS D_1000053527. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JUN-08 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 3.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 4.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.106 REMARK 200 MONOCHROMATOR : ROSENBAUM-ROCK MONOCHROMATOR REMARK 200 OPTICS : ROSENBAUM-ROCK MONOCHROMATOR 1: REMARK 200 HIGH-RESOLUTION DOUBLE-CRYSTAL REMARK 200 SAGITTAL FOCUSING, ROSENBAUM- REMARK 200 ROCK MONOCHROMATOR 2: DOUBLE REMARK 200 CRYSTAL, ROSENBAUM-ROCK VERTICAL REMARK 200 FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NOIR-1 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33455 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 49.090 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 11.90 REMARK 200 R MERGE (I) : 0.06300 REMARK 200 R SYM (I) : 0.06500 REMARK 200 FOR THE DATA SET : 24.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.70 REMARK 200 R MERGE FOR SHELL (I) : 0.44000 REMARK 200 R SYM FOR SHELL (I) : 0.46400 REMARK 200 FOR SHELL : 5.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.65M AMMONIUM SULFATE, 0.1M CITRIC REMARK 280 ACID, PH 3.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 4 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z REMARK 290 4555 Y+1/2,-X+1/2,Z REMARK 290 5555 -X+1/2,Y+1/2,-Z REMARK 290 6555 X+1/2,-Y+1/2,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 35.87250 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 35.87250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 35.87250 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 35.87250 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 35.87250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 35.87250 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 35.87250 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 35.87250 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8200 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -122.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -63.3 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: 24-MERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 81780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 46970 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -972.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 71.74500 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 35.87250 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 35.87250 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 -35.87250 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 35.87250 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 B 55 LIES ON A SPECIAL POSITION. REMARK 375 O3 GOL B 59 LIES ON A SPECIAL POSITION. REMARK 375 HOH C 70 LIES ON A SPECIAL POSITION. REMARK 375 HOH C 254 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG E 54 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG D 54 CG CD NE CZ NH1 NH2 REMARK 470 ARG F 54 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 202 O HOH A 206 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 C3 GOL B 59 O3 GOL B 59 7555 1.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 1 -130.44 -125.89 REMARK 500 SER B 1 -128.73 -125.78 REMARK 500 SER C 1 -132.80 -124.35 REMARK 500 SER D 1 -122.08 -114.63 REMARK 500 SER E 1 -128.50 -124.61 REMARK 500 SER F 1 -133.14 -126.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 55 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 56 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 57 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 58 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 59 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 60 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 61 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 55 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 56 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 57 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 58 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 59 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 60 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 61 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 55 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 56 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 57 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 55 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL D 56 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL D 57 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 F 55 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 F 56 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3HON RELATED DB: PDB REMARK 900 THE SAME PROTEIN CRYSTALLIZED AT DIFFERENT SPACE GROUP DBREF 3HSH A -1 54 UNP P39060 COIA1_HUMAN 1441 1496 DBREF 3HSH B -1 54 UNP P39060 COIA1_HUMAN 1441 1496 DBREF 3HSH C -1 54 UNP P39060 COIA1_HUMAN 1441 1496 DBREF 3HSH D -1 54 UNP P39060 COIA1_HUMAN 1441 1496 DBREF 3HSH E -1 54 UNP P39060 COIA1_HUMAN 1441 1496 DBREF 3HSH F -1 54 UNP P39060 COIA1_HUMAN 1441 1496 SEQADV 3HSH GLY A -1 UNP P39060 ALA 1441 ENGINEERED MUTATION SEQADV 3HSH GLY B -1 UNP P39060 ALA 1441 ENGINEERED MUTATION SEQADV 3HSH GLY C -1 UNP P39060 ALA 1441 ENGINEERED MUTATION SEQADV 3HSH GLY D -1 UNP P39060 ALA 1441 ENGINEERED MUTATION SEQADV 3HSH GLY E -1 UNP P39060 ALA 1441 ENGINEERED MUTATION SEQADV 3HSH GLY F -1 UNP P39060 ALA 1441 ENGINEERED MUTATION SEQRES 1 A 56 GLY SER SER GLY VAL ARG LEU TRP ALA THR ARG GLN ALA SEQRES 2 A 56 MET LEU GLY GLN VAL HIS GLU VAL PRO GLU GLY TRP LEU SEQRES 3 A 56 ILE PHE VAL ALA GLU GLN GLU GLU LEU TYR VAL ARG VAL SEQRES 4 A 56 GLN ASN GLY PHE ARG LYS VAL GLN LEU GLU ALA ARG THR SEQRES 5 A 56 PRO LEU PRO ARG SEQRES 1 B 56 GLY SER SER GLY VAL ARG LEU TRP ALA THR ARG GLN ALA SEQRES 2 B 56 MET LEU GLY GLN VAL HIS GLU VAL PRO GLU GLY TRP LEU SEQRES 3 B 56 ILE PHE VAL ALA GLU GLN GLU GLU LEU TYR VAL ARG VAL SEQRES 4 B 56 GLN ASN GLY PHE ARG LYS VAL GLN LEU GLU ALA ARG THR SEQRES 5 B 56 PRO LEU PRO ARG SEQRES 1 C 56 GLY SER SER GLY VAL ARG LEU TRP ALA THR ARG GLN ALA SEQRES 2 C 56 MET LEU GLY GLN VAL HIS GLU VAL PRO GLU GLY TRP LEU SEQRES 3 C 56 ILE PHE VAL ALA GLU GLN GLU GLU LEU TYR VAL ARG VAL SEQRES 4 C 56 GLN ASN GLY PHE ARG LYS VAL GLN LEU GLU ALA ARG THR SEQRES 5 C 56 PRO LEU PRO ARG SEQRES 1 D 56 GLY SER SER GLY VAL ARG LEU TRP ALA THR ARG GLN ALA SEQRES 2 D 56 MET LEU GLY GLN VAL HIS GLU VAL PRO GLU GLY TRP LEU SEQRES 3 D 56 ILE PHE VAL ALA GLU GLN GLU GLU LEU TYR VAL ARG VAL SEQRES 4 D 56 GLN ASN GLY PHE ARG LYS VAL GLN LEU GLU ALA ARG THR SEQRES 5 D 56 PRO LEU PRO ARG SEQRES 1 E 56 GLY SER SER GLY VAL ARG LEU TRP ALA THR ARG GLN ALA SEQRES 2 E 56 MET LEU GLY GLN VAL HIS GLU VAL PRO GLU GLY TRP LEU SEQRES 3 E 56 ILE PHE VAL ALA GLU GLN GLU GLU LEU TYR VAL ARG VAL SEQRES 4 E 56 GLN ASN GLY PHE ARG LYS VAL GLN LEU GLU ALA ARG THR SEQRES 5 E 56 PRO LEU PRO ARG SEQRES 1 F 56 GLY SER SER GLY VAL ARG LEU TRP ALA THR ARG GLN ALA SEQRES 2 F 56 MET LEU GLY GLN VAL HIS GLU VAL PRO GLU GLY TRP LEU SEQRES 3 F 56 ILE PHE VAL ALA GLU GLN GLU GLU LEU TYR VAL ARG VAL SEQRES 4 F 56 GLN ASN GLY PHE ARG LYS VAL GLN LEU GLU ALA ARG THR SEQRES 5 F 56 PRO LEU PRO ARG HET SO4 A 55 5 HET SO4 A 56 5 HET SO4 A 57 5 HET SO4 A 58 5 HET SO4 A 59 5 HET GOL A 60 6 HET GOL A 61 6 HET SO4 B 55 5 HET SO4 B 56 5 HET SO4 B 57 5 HET GOL B 58 6 HET GOL B 59 6 HET GOL B 60 6 HET GOL B 61 6 HET SO4 C 55 5 HET SO4 C 56 5 HET GOL C 57 6 HET SO4 D 55 5 HET GOL D 56 6 HET GOL D 57 6 HET SO4 F 55 5 HET SO4 F 56 5 HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 7 SO4 13(O4 S 2-) FORMUL 12 GOL 9(C3 H8 O3) FORMUL 29 HOH *276(H2 O) HELIX 1 1 THR A 8 VAL A 16 1 9 HELIX 2 2 HIS A 17 VAL A 19 5 3 HELIX 3 3 THR B 8 VAL B 16 1 9 HELIX 4 4 HIS B 17 VAL B 19 5 3 HELIX 5 5 THR C 8 VAL C 16 1 9 HELIX 6 6 HIS C 17 VAL C 19 5 3 HELIX 7 7 THR D 8 VAL D 16 1 9 HELIX 8 8 HIS D 17 VAL D 19 5 3 HELIX 9 9 THR E 8 VAL E 16 1 9 HELIX 10 10 HIS E 17 VAL E 19 5 3 HELIX 11 11 THR F 8 VAL F 16 1 9 HELIX 12 12 HIS F 17 VAL F 19 5 3 SHEET 1 A 5 VAL A 3 TRP A 6 0 SHEET 2 A 5 LEU A 24 VAL A 27 1 O LEU A 24 N ARG A 4 SHEET 3 A 5 GLU A 32 VAL A 37 -1 O GLU A 32 N VAL A 27 SHEET 4 A 5 GLY A 40 VAL A 44 -1 O VAL A 44 N LEU A 33 SHEET 5 A 5 LEU B 46 PRO B 51 -1 O THR B 50 N PHE A 41 SHEET 1 B 5 LEU A 46 PRO A 51 0 SHEET 2 B 5 GLY C 40 VAL C 44 -1 O PHE C 41 N THR A 50 SHEET 3 B 5 GLU C 32 VAL C 37 -1 N LEU C 33 O VAL C 44 SHEET 4 B 5 LEU C 24 VAL C 27 -1 N ILE C 25 O TYR C 34 SHEET 5 B 5 VAL C 3 TRP C 6 1 N ARG C 4 O LEU C 24 SHEET 1 C 5 VAL B 3 TRP B 6 0 SHEET 2 C 5 LEU B 24 VAL B 27 1 O LEU B 24 N ARG B 4 SHEET 3 C 5 GLU B 32 VAL B 37 -1 O TYR B 34 N ILE B 25 SHEET 4 C 5 GLY B 40 VAL B 44 -1 O VAL B 44 N LEU B 33 SHEET 5 C 5 LEU C 46 PRO C 51 -1 O THR C 50 N PHE B 41 SHEET 1 D 5 VAL D 3 TRP D 6 0 SHEET 2 D 5 LEU D 24 VAL D 27 1 O LEU D 24 N ARG D 4 SHEET 3 D 5 GLU D 32 VAL D 37 -1 O GLU D 32 N VAL D 27 SHEET 4 D 5 GLY D 40 VAL D 44 -1 O VAL D 44 N LEU D 33 SHEET 5 D 5 LEU F 46 PRO F 51 -1 O THR F 50 N PHE D 41 SHEET 1 E 5 LEU D 46 PRO D 51 0 SHEET 2 E 5 GLY E 40 VAL E 44 -1 O PHE E 41 N THR D 50 SHEET 3 E 5 GLU E 32 VAL E 37 -1 N LEU E 33 O VAL E 44 SHEET 4 E 5 LEU E 24 VAL E 27 -1 N ILE E 25 O TYR E 34 SHEET 5 E 5 VAL E 3 TRP E 6 1 N ARG E 4 O LEU E 24 SHEET 1 F 5 THR E 50 PRO E 51 0 SHEET 2 F 5 GLY F 40 LYS F 43 -1 O PHE F 41 N THR E 50 SHEET 3 F 5 GLU F 32 VAL F 37 -1 N VAL F 35 O ARG F 42 SHEET 4 F 5 LEU F 24 VAL F 27 -1 N ILE F 25 O TYR F 34 SHEET 5 F 5 VAL F 3 TRP F 6 1 N ARG F 4 O LEU F 24 SITE 1 AC1 9 GLU A 21 ARG A 36 VAL A 37 ASN A 39 SITE 2 AC1 9 HOH A 71 GLU B 21 ARG B 36 VAL B 37 SITE 3 AC1 9 ASN B 39 SITE 1 AC2 5 ARG A 9 LEU A 13 HOH A 244 GLU C 32 SITE 2 AC2 5 LYS C 43 SITE 1 AC3 7 GLN A 15 GLU A 18 HOH B 162 TRP C 6 SITE 2 AC3 7 ALA C 7 ALA C 11 HOH C 132 SITE 1 AC4 6 THR A 8 ALA A 11 PRO A 53 ARG A 54 SITE 2 AC4 6 HOH A 129 HOH A 204 SITE 1 AC5 5 LYS A 43 GLN A 45 HOH A 104 HOH A 247 SITE 2 AC5 5 GLU B 47 SITE 1 AC6 7 ARG A 9 GLU A 32 TYR A 34 PHE A 41 SITE 2 AC6 7 LYS A 43 HOH A 187 THR B 50 SITE 1 AC7 7 ASN A 39 HOH A 192 GLN B 38 ASN B 39 SITE 2 AC7 7 GOL B 60 ARG C 49 HOH C 214 SITE 1 AC8 3 ARG B 49 HOH B 141 HOH B 227 SITE 1 AC9 8 ARG B 9 GLU B 32 LYS B 43 GLN B 45 SITE 2 AC9 8 GOL B 59 HOH B 240 HOH B 243 GLU C 47 SITE 1 BC1 6 TRP B 6 ALA B 7 ALA B 11 GLN B 15 SITE 2 BC1 6 GLU B 18 HOH B 210 SITE 1 BC2 6 LEU B 13 HIS B 17 GLU B 29 HOH B 71 SITE 2 BC2 6 PRO C 53 ARG C 54 SITE 1 BC3 6 ARG B 9 GLU B 32 TYR B 34 LYS B 43 SITE 2 BC3 6 SO4 B 56 THR C 50 SITE 1 BC4 4 GOL A 61 ARG B 54 ARG C 49 HOH C 82 SITE 1 BC5 6 GLU B 29 GLN B 30 GLU B 47 ALA B 48 SITE 2 BC5 6 HOH B 209 HOH B 266 SITE 1 BC6 9 GLU C 21 ARG C 36 VAL C 37 GLN C 38 SITE 2 BC6 9 ASN C 39 HOH C 73 GLU D 21 ARG D 36 SITE 3 BC6 9 ASN D 39 SITE 1 BC7 7 LEU A 13 GLY A 14 HOH A 84 ARG B 54 SITE 2 BC7 7 ARG C 9 GLU C 29 GLN C 30 SITE 1 BC8 3 ARG A 49 HOH A 94 ARG C 42 SITE 1 BC9 5 ALA A 7 ALA A 11 ARG A 54 GLN D 15 SITE 2 BC9 5 GLU D 18 SITE 1 CC1 5 ARG D 9 GLN D 10 LEU D 13 HOH D 252 SITE 2 CC1 5 ARG F 49 SITE 1 CC2 4 ARG D 9 GLU D 32 TYR D 34 LYS D 43 SITE 1 CC3 8 GLU E 21 ARG E 36 VAL E 37 ASN E 39 SITE 2 CC3 8 GLU F 21 ARG F 36 ASN F 39 HOH F 145 SITE 1 CC4 4 GLN C 15 GLU C 18 TRP F 6 ALA F 7 CRYST1 71.745 71.745 134.723 90.00 90.00 90.00 P 4 21 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013938 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013938 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007423 0.00000