HEADER IMMUNE SYSTEM 14-JUN-09 3HUJ TITLE CRYSTAL STRUCTURE OF HUMAN CD1D-ALPHA-GALACTOSYLCERAMIDE IN COMPLEX TITLE 2 WITH SEMI-INVARIANT NKT CELL RECEPTOR CAVEAT 3HUJ NAG I 1 HAS WRONG CHIRALITY AT ATOM C1 NAG C 2000 HAS WRONG CAVEAT 2 3HUJ CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: T-CELL SURFACE GLYCOPROTEIN CD1D; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: UNP RESIDUES 21-295; COMPND 5 SYNONYM: R3G1; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: BETA-2-MICROGLOBULIN; COMPND 9 CHAIN: B, D; COMPND 10 SYNONYM: BETA-2-MICROGLOBULIN FORM PI 5.3; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: NKT15 T CELL RECEPTOR ALPHA-CHAIN; COMPND 14 CHAIN: E, G; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: NKT15 T CELL RECEPTOR BETA-CHAIN; COMPND 18 CHAIN: F, H; COMPND 19 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CD1D; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HIGH-FIVE CELLS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PFASTDAC DUAL; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 17 EXPRESSION_SYSTEM_CELL_LINE: HIGH-FIVE CELLS; SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 19 EXPRESSION_SYSTEM_VECTOR: PFASTDAC DUAL; SOURCE 20 MOL_ID: 3; SOURCE 21 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 22 ORGANISM_COMMON: HUMAN; SOURCE 23 ORGANISM_TAXID: 9606; SOURCE 24 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 25 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 26 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 27 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 28 EXPRESSION_SYSTEM_PLASMID: PET30; SOURCE 29 MOL_ID: 4; SOURCE 30 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 31 ORGANISM_COMMON: HUMAN; SOURCE 32 ORGANISM_TAXID: 9606; SOURCE 33 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 34 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 35 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 36 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 37 EXPRESSION_SYSTEM_PLASMID: PET30 KEYWDS CD1D, NKT T CELL RECEPTOR, ALPHA-GALACTOSYLCERAMIDE, PROTEIN RECEPTOR KEYWDS 2 COMPLEX, CELL MEMBRANE, DISULFIDE BOND, ENDOSOME, GLYCOPROTEIN, KEYWDS 3 HOST-VIRUS INTERACTION, IMMUNE RESPONSE, IMMUNOGLOBULIN DOMAIN, KEYWDS 4 INNATE IMMUNITY, LYSOSOME, MEMBRANE, TRANSMEMBRANE, DISEASE KEYWDS 5 MUTATION, GLYCATION, MHC I, PYRROLIDONE CARBOXYLIC ACID, SECRETED, KEYWDS 6 IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR S.S.PANG REVDAT 4 01-NOV-23 3HUJ 1 HETSYN REVDAT 3 29-JUL-20 3HUJ 1 CAVEAT COMPND REMARK SEQADV REVDAT 3 2 1 HETNAM LINK SITE ATOM REVDAT 2 13-JUL-11 3HUJ 1 VERSN REVDAT 1 28-JUL-09 3HUJ 0 JRNL AUTH D.G.PELLICCI,O.PATEL,L.KJER-NIELSEN,S.S.PANG,L.C.SULLIVAN, JRNL AUTH 2 K.KYPARISSOUDIS,A.G.BROOKS,H.H.REID,S.GRAS,I.S.LUCET,R.KOH, JRNL AUTH 3 M.J.SMYTH,T.MALLEVAEY,J.L.MATSUDA,L.GAPIN,J.MCCLUSKEY, JRNL AUTH 4 D.I.GODFREY,J.ROSSJOHN JRNL TITL DIFFERENTIAL RECOGNITION OF CD1D-ALPHA-GALACTOSYL CERAMIDE JRNL TITL 2 BY THE V BETA 8.2 AND V BETA 7 SEMI-INVARIANT NKT T CELL JRNL TITL 3 RECEPTORS JRNL REF IMMUNITY V. 31 47 2009 JRNL REFN ISSN 1074-7613 JRNL PMID 19592275 JRNL DOI 10.1016/J.IMMUNI.2009.04.018 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.28 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.5 REMARK 3 NUMBER OF REFLECTIONS : 62421 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.279 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3288 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 70.92 REMARK 3 BIN R VALUE (WORKING SET) : 0.2920 REMARK 3 BIN FREE R VALUE SET COUNT : 186 REMARK 3 BIN FREE R VALUE : 0.3900 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 12944 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 213 REMARK 3 SOLVENT ATOMS : 482 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.31000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : -0.67000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.92000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.762 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.344 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.248 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 21.082 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.929 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.876 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 13582 ; 0.007 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 18484 ; 1.119 ; 1.947 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1630 ; 5.646 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 634 ;36.044 ;24.022 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2124 ;17.474 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 77 ;18.084 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 2009 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 10347 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 5660 ; 0.189 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 8938 ; 0.300 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 804 ; 0.155 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 107 ; 0.209 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 22 ; 0.136 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 8388 ; 0.370 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 13216 ; 0.657 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 6027 ; 0.770 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 5268 ; 1.246 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3HUJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-JUN-09. REMARK 100 THE DEPOSITION ID IS D_1000053598. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-NOV-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97940 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66054 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.1 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : 0.08800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 74.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : 0.34400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: PDB ENTRY 2PO6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS-HCL, 0.2M MAGNESIUM REMARK 280 CHLORIDE, 12% PEG 10000, PH 9.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, G, H, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, E, F, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH H 268 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 0 REMARK 465 PRO A 1 REMARK 465 GLY A 2 REMARK 465 VAL A 3 REMARK 465 PRO A 4 REMARK 465 GLN A 5 REMARK 465 HIS A 281 REMARK 465 HIS A 282 REMARK 465 HIS A 283 REMARK 465 ASP B 98 REMARK 465 MET B 99 REMARK 465 SER C 0 REMARK 465 PRO C 1 REMARK 465 GLY C 2 REMARK 465 VAL C 3 REMARK 465 PRO C 4 REMARK 465 HIS C 279 REMARK 465 HIS C 280 REMARK 465 HIS C 281 REMARK 465 HIS C 282 REMARK 465 HIS C 283 REMARK 465 MET E -1 REMARK 465 LYS E 0 REMARK 465 LYS E 132 REMARK 465 SER E 133 REMARK 465 SER E 137 REMARK 465 LYS E 154 REMARK 465 PRO E 207 REMARK 465 GLU E 208 REMARK 465 SER E 209 REMARK 465 SER E 210 REMARK 465 MET F 0 REMARK 465 GLU F 1 REMARK 465 ARG F 100 REMARK 465 GLY F 101 REMARK 465 MET G -1 REMARK 465 LYS G 0 REMARK 465 LYS G 136 REMARK 465 PRO G 207 REMARK 465 GLU G 208 REMARK 465 SER G 209 REMARK 465 SER G 210 REMARK 465 MET H 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 6 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 136 CG CD OE1 OE2 REMARK 470 GLU A 224 CG CD OE1 OE2 REMARK 470 GLN A 225 CG CD OE1 NE2 REMARK 470 GLN A 228 CG CD OE1 NE2 REMARK 470 GLN A 231 CG CD OE1 NE2 REMARK 470 GLU A 255 CG CD OE1 OE2 REMARK 470 GLN A 271 CG CD OE1 NE2 REMARK 470 ILE B 1 CG1 CG2 CD1 REMARK 470 GLU B 77 CG CD OE1 OE2 REMARK 470 GLN C 5 CG CD OE1 NE2 REMARK 470 ASP C 45 CG OD1 OD2 REMARK 470 ASN C 108 CG OD1 ND2 REMARK 470 GLU C 136 CG CD OE1 OE2 REMARK 470 LYS C 178 CG CD CE NZ REMARK 470 ARG C 193 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 219 CG CD CE NZ REMARK 470 GLU C 224 CG CD OE1 OE2 REMARK 470 GLU C 226 CG CD OE1 OE2 REMARK 470 GLN C 227 CG CD OE1 NE2 REMARK 470 GLN C 228 CG CD OE1 NE2 REMARK 470 ASP C 250 CG OD1 OD2 REMARK 470 ARG C 262 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 264 CG CD CE NZ REMARK 470 ILE D 1 CG1 CG2 CD1 REMARK 470 LYS D 75 CG CD CE NZ REMARK 470 LEU F 102 CG CD1 CD2 REMARK 470 GLN F 183 CG CD OE1 NE2 REMARK 470 ASP F 247 CG OD1 OD2 REMARK 470 ARG G 129 CG CD NE CZ NH1 NH2 REMARK 470 LYS G 132 CG CD CE NZ REMARK 470 ASP G 135 CG OD1 OD2 REMARK 470 LYS G 154 CG CD CE NZ REMARK 470 ASN G 183 CG OD1 ND2 REMARK 470 ARG H 98 CG CD NE CZ NH1 NH2 REMARK 470 ASP H 247 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN C 42 C2 NAG J 1 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU E 32 CA - CB - CG ANGL. DEV. = 17.3 DEGREES REMARK 500 LEU G 32 CA - CB - CG ANGL. DEV. = 16.5 DEGREES REMARK 500 LEU G 166 CA - CB - CG ANGL. DEV. = 14.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 108 -51.24 -142.49 REMARK 500 ALA A 253 -143.71 65.45 REMARK 500 ALA A 257 91.84 61.93 REMARK 500 LEU A 268 63.93 86.87 REMARK 500 GLN B 2 -49.72 -134.95 REMARK 500 ARG C 6 -14.75 -160.40 REMARK 500 ARG C 89 52.29 39.23 REMARK 500 ASN C 108 46.92 -89.17 REMARK 500 ALA C 137 132.72 -14.68 REMARK 500 PRO C 195 112.42 -23.66 REMARK 500 ARG C 201 -134.90 -114.88 REMARK 500 LEU C 203 42.15 -149.65 REMARK 500 GLU C 226 93.85 -67.57 REMARK 500 GLU C 255 32.36 -95.95 REMARK 500 GLN C 271 88.25 -56.38 REMARK 500 TRP C 277 98.96 -51.18 REMARK 500 GLN D 2 -74.42 -56.04 REMARK 500 LYS D 48 79.10 -111.49 REMARK 500 TRP D 60 -10.33 75.77 REMARK 500 ARG D 97 -54.17 -28.47 REMARK 500 ALA E 79 72.81 55.83 REMARK 500 SER E 85 100.59 -59.52 REMARK 500 ASP E 130 -147.78 -95.00 REMARK 500 ASP E 135 28.75 -149.40 REMARK 500 PHE E 187 115.48 -7.23 REMARK 500 ASP E 201 31.40 -91.59 REMARK 500 PRO F 39 113.53 -31.40 REMARK 500 PHE F 75 66.76 -154.35 REMARK 500 SER F 88 -171.68 -175.77 REMARK 500 ARG F 98 -63.00 -95.11 REMARK 500 ASP F 188 71.81 -112.71 REMARK 500 PRO F 233 71.74 -69.46 REMARK 500 SER G 30 -60.86 -103.73 REMARK 500 LYS G 71 60.64 38.04 REMARK 500 SER H 88 -179.54 -178.20 REMARK 500 ARG H 98 -139.07 -139.55 REMARK 500 ARG H 100 -168.20 -124.09 REMARK 500 PRO H 184 2.12 -62.69 REMARK 500 ASP H 188 53.22 -101.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2PO6 RELATED DB: PDB REMARK 900 SAME PROTEIN AT A HIGHER RESOLUTION REMARK 999 REMARK 999 SEQUENCE REMARK 999 NO SUITABLE DATABASE REFERENCES WERE FOUND FOR CHAINS E, F, G AND REMARK 999 H.(KJER-NIELSEN, L., BORG, N.A., ET AL., J. EXP MED. 203(3) 661-673) REMARK 999 , 2006 DBREF 3HUJ A 3 277 UNP P15813 CD1D_HUMAN 21 295 DBREF 3HUJ B 1 99 UNP P61769 B2MG_HUMAN 21 119 DBREF 3HUJ C 3 277 UNP P15813 CD1D_HUMAN 21 295 DBREF 3HUJ D 1 99 UNP P61769 B2MG_HUMAN 21 119 DBREF 3HUJ E -1 210 PDB 3HUJ 3HUJ -1 210 DBREF 3HUJ G -1 210 PDB 3HUJ 3HUJ -1 210 DBREF 3HUJ F 0 247 PDB 3HUJ 3HUJ 0 247 DBREF 3HUJ H 0 247 PDB 3HUJ 3HUJ 0 247 SEQADV 3HUJ SER A 0 UNP P15813 EXPRESSION TAG SEQADV 3HUJ PRO A 1 UNP P15813 EXPRESSION TAG SEQADV 3HUJ GLY A 2 UNP P15813 EXPRESSION TAG SEQADV 3HUJ HIS A 278 UNP P15813 EXPRESSION TAG SEQADV 3HUJ HIS A 279 UNP P15813 EXPRESSION TAG SEQADV 3HUJ HIS A 280 UNP P15813 EXPRESSION TAG SEQADV 3HUJ HIS A 281 UNP P15813 EXPRESSION TAG SEQADV 3HUJ HIS A 282 UNP P15813 EXPRESSION TAG SEQADV 3HUJ HIS A 283 UNP P15813 EXPRESSION TAG SEQADV 3HUJ SER C 0 UNP P15813 EXPRESSION TAG SEQADV 3HUJ PRO C 1 UNP P15813 EXPRESSION TAG SEQADV 3HUJ GLY C 2 UNP P15813 EXPRESSION TAG SEQADV 3HUJ HIS C 278 UNP P15813 EXPRESSION TAG SEQADV 3HUJ HIS C 279 UNP P15813 EXPRESSION TAG SEQADV 3HUJ HIS C 280 UNP P15813 EXPRESSION TAG SEQADV 3HUJ HIS C 281 UNP P15813 EXPRESSION TAG SEQADV 3HUJ HIS C 282 UNP P15813 EXPRESSION TAG SEQADV 3HUJ HIS C 283 UNP P15813 EXPRESSION TAG SEQRES 1 A 284 SER PRO GLY VAL PRO GLN ARG LEU PHE PRO LEU ARG CYS SEQRES 2 A 284 LEU GLN ILE SER SER PHE ALA ASN SER SER TRP THR ARG SEQRES 3 A 284 THR ASP GLY LEU ALA TRP LEU GLY GLU LEU GLN THR HIS SEQRES 4 A 284 SER TRP SER ASN ASP SER ASP THR VAL ARG SER LEU LYS SEQRES 5 A 284 PRO TRP SER GLN GLY THR PHE SER ASP GLN GLN TRP GLU SEQRES 6 A 284 THR LEU GLN HIS ILE PHE ARG VAL TYR ARG SER SER PHE SEQRES 7 A 284 THR ARG ASP VAL LYS GLU PHE ALA LYS MET LEU ARG LEU SEQRES 8 A 284 SER TYR PRO LEU GLU LEU GLN VAL SER ALA GLY CYS GLU SEQRES 9 A 284 VAL HIS PRO GLY ASN ALA SER ASN ASN PHE PHE HIS VAL SEQRES 10 A 284 ALA PHE GLN GLY LYS ASP ILE LEU SER PHE GLN GLY THR SEQRES 11 A 284 SER TRP GLU PRO THR GLN GLU ALA PRO LEU TRP VAL ASN SEQRES 12 A 284 LEU ALA ILE GLN VAL LEU ASN GLN ASP LYS TRP THR ARG SEQRES 13 A 284 GLU THR VAL GLN TRP LEU LEU ASN GLY THR CYS PRO GLN SEQRES 14 A 284 PHE VAL SER GLY LEU LEU GLU SER GLY LYS SER GLU LEU SEQRES 15 A 284 LYS LYS GLN VAL LYS PRO LYS ALA TRP LEU SER ARG GLY SEQRES 16 A 284 PRO SER PRO GLY PRO GLY ARG LEU LEU LEU VAL CYS HIS SEQRES 17 A 284 VAL SER GLY PHE TYR PRO LYS PRO VAL TRP VAL LYS TRP SEQRES 18 A 284 MET ARG GLY GLU GLN GLU GLN GLN GLY THR GLN PRO GLY SEQRES 19 A 284 ASP ILE LEU PRO ASN ALA ASP GLU THR TRP TYR LEU ARG SEQRES 20 A 284 ALA THR LEU ASP VAL VAL ALA GLY GLU ALA ALA GLY LEU SEQRES 21 A 284 SER CYS ARG VAL LYS HIS SER SER LEU GLU GLY GLN ASP SEQRES 22 A 284 ILE VAL LEU TYR TRP HIS HIS HIS HIS HIS HIS SEQRES 1 B 99 ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER ARG HIS SEQRES 2 B 99 PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN CYS TYR SEQRES 3 B 99 VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL ASP LEU SEQRES 4 B 99 LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU HIS SER SEQRES 5 B 99 ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR LEU LEU SEQRES 6 B 99 TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP GLU TYR SEQRES 7 B 99 ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN PRO LYS SEQRES 8 B 99 ILE VAL LYS TRP ASP ARG ASP MET SEQRES 1 C 284 SER PRO GLY VAL PRO GLN ARG LEU PHE PRO LEU ARG CYS SEQRES 2 C 284 LEU GLN ILE SER SER PHE ALA ASN SER SER TRP THR ARG SEQRES 3 C 284 THR ASP GLY LEU ALA TRP LEU GLY GLU LEU GLN THR HIS SEQRES 4 C 284 SER TRP SER ASN ASP SER ASP THR VAL ARG SER LEU LYS SEQRES 5 C 284 PRO TRP SER GLN GLY THR PHE SER ASP GLN GLN TRP GLU SEQRES 6 C 284 THR LEU GLN HIS ILE PHE ARG VAL TYR ARG SER SER PHE SEQRES 7 C 284 THR ARG ASP VAL LYS GLU PHE ALA LYS MET LEU ARG LEU SEQRES 8 C 284 SER TYR PRO LEU GLU LEU GLN VAL SER ALA GLY CYS GLU SEQRES 9 C 284 VAL HIS PRO GLY ASN ALA SER ASN ASN PHE PHE HIS VAL SEQRES 10 C 284 ALA PHE GLN GLY LYS ASP ILE LEU SER PHE GLN GLY THR SEQRES 11 C 284 SER TRP GLU PRO THR GLN GLU ALA PRO LEU TRP VAL ASN SEQRES 12 C 284 LEU ALA ILE GLN VAL LEU ASN GLN ASP LYS TRP THR ARG SEQRES 13 C 284 GLU THR VAL GLN TRP LEU LEU ASN GLY THR CYS PRO GLN SEQRES 14 C 284 PHE VAL SER GLY LEU LEU GLU SER GLY LYS SER GLU LEU SEQRES 15 C 284 LYS LYS GLN VAL LYS PRO LYS ALA TRP LEU SER ARG GLY SEQRES 16 C 284 PRO SER PRO GLY PRO GLY ARG LEU LEU LEU VAL CYS HIS SEQRES 17 C 284 VAL SER GLY PHE TYR PRO LYS PRO VAL TRP VAL LYS TRP SEQRES 18 C 284 MET ARG GLY GLU GLN GLU GLN GLN GLY THR GLN PRO GLY SEQRES 19 C 284 ASP ILE LEU PRO ASN ALA ASP GLU THR TRP TYR LEU ARG SEQRES 20 C 284 ALA THR LEU ASP VAL VAL ALA GLY GLU ALA ALA GLY LEU SEQRES 21 C 284 SER CYS ARG VAL LYS HIS SER SER LEU GLU GLY GLN ASP SEQRES 22 C 284 ILE VAL LEU TYR TRP HIS HIS HIS HIS HIS HIS SEQRES 1 D 99 ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER ARG HIS SEQRES 2 D 99 PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN CYS TYR SEQRES 3 D 99 VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL ASP LEU SEQRES 4 D 99 LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU HIS SER SEQRES 5 D 99 ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR LEU LEU SEQRES 6 D 99 TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP GLU TYR SEQRES 7 D 99 ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN PRO LYS SEQRES 8 D 99 ILE VAL LYS TRP ASP ARG ASP MET SEQRES 1 E 209 MET LYS ASN GLN VAL GLU GLN SER PRO GLN SER LEU ILE SEQRES 2 E 209 ILE LEU GLU GLY LYS ASN CYS THR LEU GLN CYS ASN TYR SEQRES 3 E 209 THR VAL SER PRO PHE SER ASN LEU ARG TRP TYR LYS GLN SEQRES 4 E 209 ASP THR GLY ARG GLY PRO VAL SER LEU THR ILE MET THR SEQRES 5 E 209 PHE SER GLU ASN THR LYS SER ASN GLY ARG TYR THR ALA SEQRES 6 E 209 THR LEU ASP ALA ASP THR LYS GLN SER SER LEU HIS ILE SEQRES 7 E 209 THR ALA SER GLN LEU SER ASP SER ALA SER TYR ILE CYS SEQRES 8 E 209 VAL VAL SER ASP ARG GLY SER THR LEU GLY ARG LEU TYR SEQRES 9 E 209 PHE GLY ARG GLY THR GLN LEU THR VAL TRP PRO ASP ILE SEQRES 10 E 209 GLN ASN PRO ASP PRO ALA VAL TYR GLN LEU ARG ASP SER SEQRES 11 E 209 LYS SER SER ASP LYS SER VAL CYS LEU PHE THR ASP PHE SEQRES 12 E 209 ASP SER GLN THR ASN VAL SER GLN SER LYS ASP SER ASP SEQRES 13 E 209 VAL TYR ILE THR ASP LYS CYS VAL LEU ASP MET ARG SER SEQRES 14 E 209 MET ASP PHE LYS SER ASN SER ALA VAL ALA TRP SER ASN SEQRES 15 E 209 LYS SER ASP PHE ALA CYS ALA ASN ALA PHE ASN ASN SER SEQRES 16 E 209 ILE ILE PRO GLU ASP THR PHE PHE PRO SER PRO GLU SER SEQRES 17 E 209 SER SEQRES 1 F 246 MET GLU ALA ASP ILE TYR GLN THR PRO ARG TYR LEU VAL SEQRES 2 F 246 ILE GLY THR GLY LYS LYS ILE THR LEU GLU CYS SER GLN SEQRES 3 F 246 THR MET GLY HIS ASP LYS MET TYR TRP TYR GLN GLN ASP SEQRES 4 F 246 PRO GLY MET GLU LEU HIS LEU ILE HIS TYR SER TYR GLY SEQRES 5 F 246 VAL ASN SER THR GLU LYS GLY ASP LEU SER SER GLU SER SEQRES 6 F 246 THR VAL SER ARG ILE ARG THR GLU HIS PHE PRO LEU THR SEQRES 7 F 246 LEU GLU SER ALA ARG PRO SER HIS THR SER GLN TYR LEU SEQRES 8 F 246 CYS ALA SER SER GLY LEU ARG ASP ARG GLY LEU TYR GLU SEQRES 9 F 246 GLN TYR PHE GLY PRO GLY THR ARG LEU THR VAL THR GLU SEQRES 10 F 246 ASP LEU LYS ASN VAL PHE PRO PRO GLU VAL ALA VAL PHE SEQRES 11 F 246 GLU PRO SER GLU ALA GLU ILE SER HIS THR GLN LYS ALA SEQRES 12 F 246 THR LEU VAL CYS LEU ALA THR GLY PHE TYR PRO ASP HIS SEQRES 13 F 246 VAL GLU LEU SER TRP TRP VAL ASN GLY LYS GLU VAL HIS SEQRES 14 F 246 SER GLY VAL CYS THR ASP PRO GLN PRO LEU LYS GLU GLN SEQRES 15 F 246 PRO ALA LEU ASN ASP SER ARG TYR ALA LEU SER SER ARG SEQRES 16 F 246 LEU ARG VAL SER ALA THR PHE TRP GLN ASN PRO ARG ASN SEQRES 17 F 246 HIS PHE ARG CYS GLN VAL GLN PHE TYR GLY LEU SER GLU SEQRES 18 F 246 ASN ASP GLU TRP THR GLN ASP ARG ALA LYS PRO VAL THR SEQRES 19 F 246 GLN ILE VAL SER ALA GLU ALA TRP GLY ARG ALA ASP SEQRES 1 G 209 MET LYS ASN GLN VAL GLU GLN SER PRO GLN SER LEU ILE SEQRES 2 G 209 ILE LEU GLU GLY LYS ASN CYS THR LEU GLN CYS ASN TYR SEQRES 3 G 209 THR VAL SER PRO PHE SER ASN LEU ARG TRP TYR LYS GLN SEQRES 4 G 209 ASP THR GLY ARG GLY PRO VAL SER LEU THR ILE MET THR SEQRES 5 G 209 PHE SER GLU ASN THR LYS SER ASN GLY ARG TYR THR ALA SEQRES 6 G 209 THR LEU ASP ALA ASP THR LYS GLN SER SER LEU HIS ILE SEQRES 7 G 209 THR ALA SER GLN LEU SER ASP SER ALA SER TYR ILE CYS SEQRES 8 G 209 VAL VAL SER ASP ARG GLY SER THR LEU GLY ARG LEU TYR SEQRES 9 G 209 PHE GLY ARG GLY THR GLN LEU THR VAL TRP PRO ASP ILE SEQRES 10 G 209 GLN ASN PRO ASP PRO ALA VAL TYR GLN LEU ARG ASP SER SEQRES 11 G 209 LYS SER SER ASP LYS SER VAL CYS LEU PHE THR ASP PHE SEQRES 12 G 209 ASP SER GLN THR ASN VAL SER GLN SER LYS ASP SER ASP SEQRES 13 G 209 VAL TYR ILE THR ASP LYS CYS VAL LEU ASP MET ARG SER SEQRES 14 G 209 MET ASP PHE LYS SER ASN SER ALA VAL ALA TRP SER ASN SEQRES 15 G 209 LYS SER ASP PHE ALA CYS ALA ASN ALA PHE ASN ASN SER SEQRES 16 G 209 ILE ILE PRO GLU ASP THR PHE PHE PRO SER PRO GLU SER SEQRES 17 G 209 SER SEQRES 1 H 246 MET GLU ALA ASP ILE TYR GLN THR PRO ARG TYR LEU VAL SEQRES 2 H 246 ILE GLY THR GLY LYS LYS ILE THR LEU GLU CYS SER GLN SEQRES 3 H 246 THR MET GLY HIS ASP LYS MET TYR TRP TYR GLN GLN ASP SEQRES 4 H 246 PRO GLY MET GLU LEU HIS LEU ILE HIS TYR SER TYR GLY SEQRES 5 H 246 VAL ASN SER THR GLU LYS GLY ASP LEU SER SER GLU SER SEQRES 6 H 246 THR VAL SER ARG ILE ARG THR GLU HIS PHE PRO LEU THR SEQRES 7 H 246 LEU GLU SER ALA ARG PRO SER HIS THR SER GLN TYR LEU SEQRES 8 H 246 CYS ALA SER SER GLY LEU ARG ASP ARG GLY LEU TYR GLU SEQRES 9 H 246 GLN TYR PHE GLY PRO GLY THR ARG LEU THR VAL THR GLU SEQRES 10 H 246 ASP LEU LYS ASN VAL PHE PRO PRO GLU VAL ALA VAL PHE SEQRES 11 H 246 GLU PRO SER GLU ALA GLU ILE SER HIS THR GLN LYS ALA SEQRES 12 H 246 THR LEU VAL CYS LEU ALA THR GLY PHE TYR PRO ASP HIS SEQRES 13 H 246 VAL GLU LEU SER TRP TRP VAL ASN GLY LYS GLU VAL HIS SEQRES 14 H 246 SER GLY VAL CYS THR ASP PRO GLN PRO LEU LYS GLU GLN SEQRES 15 H 246 PRO ALA LEU ASN ASP SER ARG TYR ALA LEU SER SER ARG SEQRES 16 H 246 LEU ARG VAL SER ALA THR PHE TRP GLN ASN PRO ARG ASN SEQRES 17 H 246 HIS PHE ARG CYS GLN VAL GLN PHE TYR GLY LEU SER GLU SEQRES 18 H 246 ASN ASP GLU TRP THR GLN ASP ARG ALA LYS PRO VAL THR SEQRES 19 H 246 GLN ILE VAL SER ALA GLU ALA TRP GLY ARG ALA ASP MODRES 3HUJ ASN A 20 ASN GLYCOSYLATION SITE MODRES 3HUJ ASN C 42 ASN GLYCOSYLATION SITE MODRES 3HUJ ASN A 42 ASN GLYCOSYLATION SITE MODRES 3HUJ ASN C 20 ASN GLYCOSYLATION SITE HET NAG I 1 14 HET BMA I 2 11 HET NAG J 1 14 HET NDG J 2 14 HET BMA J 3 11 HET NAG A2000 14 HET AGH A3000 60 HET NAG C2000 14 HET AGH C3000 60 HET MG H1000 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM NDG 2-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE HETNAM AGH N-{(1S,2R,3S)-1-[(ALPHA-D-GALACTOPYRANOSYLOXY)METHYL]- HETNAM 2 AGH 2,3-DIHYDROXYHEPTADECYL}HEXACOSANAMIDE HETNAM MG MAGNESIUM ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN NDG N-ACETYL-ALPHA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY- HETSYN 2 NDG ALPHA-D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2- HETSYN 3 NDG ACETAMIDO-2-DEOXY-GLUCOSE; 2-(ACETYLAMINO)-2-DEOXY-A- HETSYN 4 NDG D-GLUCOPYRANOSE FORMUL 9 NAG 4(C8 H15 N O6) FORMUL 9 BMA 2(C6 H12 O6) FORMUL 10 NDG C8 H15 N O6 FORMUL 12 AGH 2(C50 H99 N O9) FORMUL 15 MG MG 2+ FORMUL 16 HOH *482(H2 O) HELIX 1 1 SER A 59 LEU A 88 1 30 HELIX 2 2 LEU A 139 ASN A 149 1 11 HELIX 3 3 ASP A 151 GLY A 164 1 14 HELIX 4 4 GLY A 164 GLY A 177 1 14 HELIX 5 5 GLY A 177 LYS A 182 1 6 HELIX 6 6 SER C 59 LEU C 88 1 30 HELIX 7 7 LEU C 139 ASN C 149 1 11 HELIX 8 8 ASP C 151 GLY C 164 1 14 HELIX 9 9 GLY C 164 GLY C 177 1 14 HELIX 10 10 GLY C 177 LYS C 182 1 6 HELIX 11 11 ALA E 68 THR E 70 5 3 HELIX 12 12 GLN E 81 SER E 85 5 5 HELIX 13 13 ARG F 83 THR F 87 5 5 HELIX 14 14 ASP F 119 VAL F 123 5 5 HELIX 15 15 SER F 134 GLN F 142 1 9 HELIX 16 16 ALA F 201 ASN F 206 1 6 HELIX 17 17 GLN G 81 SER G 85 5 5 HELIX 18 18 ARG H 83 THR H 87 5 5 HELIX 19 19 ASP H 119 VAL H 123 5 5 HELIX 20 20 SER H 134 GLN H 142 1 9 HELIX 21 21 ALA H 201 ASN H 206 1 6 SHEET 1 A 8 ARG A 48 SER A 49 0 SHEET 2 A 8 LEU A 35 TRP A 40 -1 N SER A 39 O ARG A 48 SHEET 3 A 8 TRP A 23 LEU A 32 -1 N ALA A 30 O THR A 37 SHEET 4 A 8 LEU A 10 ASN A 20 -1 N LEU A 13 O LEU A 29 SHEET 5 A 8 LEU A 94 VAL A 104 -1 O ALA A 100 N CYS A 12 SHEET 6 A 8 SER A 110 PHE A 118 -1 O HIS A 115 N SER A 99 SHEET 7 A 8 LYS A 121 GLN A 127 -1 O LYS A 121 N PHE A 118 SHEET 8 A 8 SER A 130 PRO A 133 -1 O GLU A 132 N SER A 125 SHEET 1 B 4 LYS A 188 ARG A 193 0 SHEET 2 B 4 ARG A 201 PHE A 211 -1 O HIS A 207 N TRP A 190 SHEET 3 B 4 TRP A 243 VAL A 252 -1 O VAL A 251 N LEU A 202 SHEET 4 B 4 LEU A 236 PRO A 237 -1 N LEU A 236 O TYR A 244 SHEET 1 C 4 GLN A 225 GLU A 226 0 SHEET 2 C 4 TRP A 217 ARG A 222 -1 N ARG A 222 O GLN A 225 SHEET 3 C 4 SER A 260 LYS A 264 -1 O SER A 260 N MET A 221 SHEET 4 C 4 ILE A 273 TYR A 276 -1 O LEU A 275 N CYS A 261 SHEET 1 D 4 LYS B 6 SER B 11 0 SHEET 2 D 4 ASN B 21 PHE B 30 -1 O SER B 28 N LYS B 6 SHEET 3 D 4 PHE B 62 PHE B 70 -1 O TYR B 66 N CYS B 25 SHEET 4 D 4 GLU B 50 HIS B 51 -1 N GLU B 50 O TYR B 67 SHEET 1 E 4 LYS B 6 SER B 11 0 SHEET 2 E 4 ASN B 21 PHE B 30 -1 O SER B 28 N LYS B 6 SHEET 3 E 4 PHE B 62 PHE B 70 -1 O TYR B 66 N CYS B 25 SHEET 4 E 4 SER B 55 PHE B 56 -1 N SER B 55 O TYR B 63 SHEET 1 F 4 GLU B 44 ARG B 45 0 SHEET 2 F 4 ILE B 35 LYS B 41 -1 N LYS B 41 O GLU B 44 SHEET 3 F 4 TYR B 78 HIS B 84 -1 O ARG B 81 N ASP B 38 SHEET 4 F 4 LYS B 91 LYS B 94 -1 O LYS B 91 N VAL B 82 SHEET 1 G 8 ARG C 48 SER C 49 0 SHEET 2 G 8 LEU C 35 TRP C 40 -1 N SER C 39 O ARG C 48 SHEET 3 G 8 TRP C 23 LEU C 32 -1 N GLY C 28 O TRP C 40 SHEET 4 G 8 LEU C 10 ASN C 20 -1 N ILE C 15 O ASP C 27 SHEET 5 G 8 LEU C 94 VAL C 104 -1 O LEU C 94 N PHE C 18 SHEET 6 G 8 SER C 110 PHE C 118 -1 O HIS C 115 N SER C 99 SHEET 7 G 8 LYS C 121 GLN C 127 -1 O LYS C 121 N PHE C 118 SHEET 8 G 8 SER C 130 PRO C 133 -1 O GLU C 132 N SER C 125 SHEET 1 H 4 LYS C 188 ARG C 193 0 SHEET 2 H 4 LEU C 204 PHE C 211 -1 O HIS C 207 N TRP C 190 SHEET 3 H 4 TRP C 243 LEU C 249 -1 O ALA C 247 N CYS C 206 SHEET 4 H 4 GLN C 231 PRO C 232 -1 N GLN C 231 O THR C 248 SHEET 1 I 4 LYS C 188 ARG C 193 0 SHEET 2 I 4 LEU C 204 PHE C 211 -1 O HIS C 207 N TRP C 190 SHEET 3 I 4 TRP C 243 LEU C 249 -1 O ALA C 247 N CYS C 206 SHEET 4 I 4 LEU C 236 PRO C 237 -1 N LEU C 236 O TYR C 244 SHEET 1 J 4 GLN C 225 GLU C 226 0 SHEET 2 J 4 TRP C 217 ARG C 222 -1 N ARG C 222 O GLN C 225 SHEET 3 J 4 SER C 260 LYS C 264 -1 O SER C 260 N MET C 221 SHEET 4 J 4 ILE C 273 TYR C 276 -1 O ILE C 273 N VAL C 263 SHEET 1 K 4 LYS D 6 SER D 11 0 SHEET 2 K 4 ASN D 21 PHE D 30 -1 O SER D 28 N LYS D 6 SHEET 3 K 4 PHE D 62 PHE D 70 -1 O PHE D 62 N PHE D 30 SHEET 4 K 4 GLU D 50 HIS D 51 -1 N GLU D 50 O TYR D 67 SHEET 1 L 4 LYS D 6 SER D 11 0 SHEET 2 L 4 ASN D 21 PHE D 30 -1 O SER D 28 N LYS D 6 SHEET 3 L 4 PHE D 62 PHE D 70 -1 O PHE D 62 N PHE D 30 SHEET 4 L 4 SER D 55 PHE D 56 -1 N SER D 55 O TYR D 63 SHEET 1 M 4 GLU D 44 ARG D 45 0 SHEET 2 M 4 GLU D 36 LYS D 41 -1 N LYS D 41 O GLU D 44 SHEET 3 M 4 TYR D 78 ASN D 83 -1 O ARG D 81 N ASP D 38 SHEET 4 M 4 LYS D 91 LYS D 94 -1 O LYS D 91 N VAL D 82 SHEET 1 N 5 VAL E 3 SER E 6 0 SHEET 2 N 5 CYS E 18 TYR E 24 -1 O ASN E 23 N GLU E 4 SHEET 3 N 5 GLN E 72 ILE E 77 -1 O SER E 73 N CYS E 22 SHEET 4 N 5 TYR E 62 ASP E 67 -1 N THR E 63 O HIS E 76 SHEET 5 N 5 THR E 55 ASN E 58 -1 N ASN E 58 O TYR E 62 SHEET 1 O 5 SER E 9 LEU E 13 0 SHEET 2 O 5 THR E 110 TRP E 115 1 O TRP E 115 N ILE E 12 SHEET 3 O 5 ALA E 86 SER E 93 -1 N ALA E 86 O LEU E 112 SHEET 4 O 5 ASN E 31 GLN E 37 -1 N ARG E 33 O VAL E 91 SHEET 5 O 5 VAL E 44 THR E 50 -1 O LEU E 46 N TRP E 34 SHEET 1 P 4 SER E 9 LEU E 13 0 SHEET 2 P 4 THR E 110 TRP E 115 1 O TRP E 115 N ILE E 12 SHEET 3 P 4 ALA E 86 SER E 93 -1 N ALA E 86 O LEU E 112 SHEET 4 P 4 LEU E 104 PHE E 106 -1 O TYR E 105 N VAL E 92 SHEET 1 Q 4 ALA E 124 GLN E 127 0 SHEET 2 Q 4 CYS E 139 THR E 142 -1 O THR E 142 N ALA E 124 SHEET 3 Q 4 PHE E 173 SER E 182 -1 O ALA E 180 N CYS E 139 SHEET 4 Q 4 VAL E 158 ILE E 160 -1 N TYR E 159 O TRP E 181 SHEET 1 R 4 ALA E 124 GLN E 127 0 SHEET 2 R 4 CYS E 139 THR E 142 -1 O THR E 142 N ALA E 124 SHEET 3 R 4 PHE E 173 SER E 182 -1 O ALA E 180 N CYS E 139 SHEET 4 R 4 CYS E 164 MET E 168 -1 N MET E 168 O PHE E 173 SHEET 1 S 4 ILE F 4 THR F 7 0 SHEET 2 S 4 ILE F 19 GLN F 25 -1 O SER F 24 N TYR F 5 SHEET 3 S 4 LEU F 77 LEU F 79 -1 O LEU F 79 N ILE F 19 SHEET 4 S 4 THR F 66 VAL F 67 -1 N THR F 66 O THR F 78 SHEET 1 T 6 TYR F 10 GLY F 14 0 SHEET 2 T 6 THR F 112 THR F 117 1 O THR F 115 N LEU F 11 SHEET 3 T 6 SER F 88 LEU F 97 -1 N SER F 88 O LEU F 114 SHEET 4 T 6 LYS F 31 GLN F 37 -1 N TYR F 35 O LEU F 91 SHEET 5 T 6 HIS F 44 SER F 49 -1 O HIS F 47 N TRP F 34 SHEET 6 T 6 GLU F 56 LYS F 57 -1 O GLU F 56 N TYR F 48 SHEET 1 U 4 TYR F 10 GLY F 14 0 SHEET 2 U 4 THR F 112 THR F 117 1 O THR F 115 N LEU F 11 SHEET 3 U 4 SER F 88 LEU F 97 -1 N SER F 88 O LEU F 114 SHEET 4 U 4 TYR F 103 PHE F 108 -1 O GLU F 105 N GLY F 96 SHEET 1 V 4 GLU F 127 PHE F 131 0 SHEET 2 V 4 LYS F 143 PHE F 153 -1 O THR F 151 N GLU F 127 SHEET 3 V 4 TYR F 191 SER F 200 -1 O LEU F 197 N LEU F 146 SHEET 4 V 4 VAL F 173 THR F 175 -1 N CYS F 174 O ARG F 196 SHEET 1 W 4 GLU F 127 PHE F 131 0 SHEET 2 W 4 LYS F 143 PHE F 153 -1 O THR F 151 N GLU F 127 SHEET 3 W 4 TYR F 191 SER F 200 -1 O LEU F 197 N LEU F 146 SHEET 4 W 4 LEU F 180 LYS F 181 -1 N LEU F 180 O ALA F 192 SHEET 1 X 4 LYS F 167 VAL F 169 0 SHEET 2 X 4 VAL F 158 VAL F 164 -1 N VAL F 164 O LYS F 167 SHEET 3 X 4 HIS F 210 PHE F 217 -1 O GLN F 216 N GLU F 159 SHEET 4 X 4 GLN F 236 TRP F 243 -1 O ALA F 240 N CYS F 213 SHEET 1 Y 5 VAL G 3 SER G 6 0 SHEET 2 Y 5 CYS G 18 TYR G 24 -1 O ASN G 23 N GLU G 4 SHEET 3 Y 5 GLN G 72 ILE G 77 -1 O ILE G 77 N CYS G 18 SHEET 4 Y 5 TYR G 62 ASP G 67 -1 N THR G 63 O HIS G 76 SHEET 5 Y 5 THR G 55 ASN G 58 -1 N LYS G 56 O ALA G 64 SHEET 1 Z 5 SER G 9 LEU G 13 0 SHEET 2 Z 5 THR G 110 TRP G 115 1 O TRP G 115 N ILE G 12 SHEET 3 Z 5 ALA G 86 SER G 93 -1 N TYR G 88 O THR G 110 SHEET 4 Z 5 ASN G 31 GLN G 37 -1 N TYR G 35 O ILE G 89 SHEET 5 Z 5 VAL G 44 THR G 50 -1 O LEU G 46 N TRP G 34 SHEET 1 AA 4 SER G 9 LEU G 13 0 SHEET 2 AA 4 THR G 110 TRP G 115 1 O TRP G 115 N ILE G 12 SHEET 3 AA 4 ALA G 86 SER G 93 -1 N TYR G 88 O THR G 110 SHEET 4 AA 4 LEU G 104 PHE G 106 -1 O TYR G 105 N VAL G 92 SHEET 1 AB 8 VAL G 158 ILE G 160 0 SHEET 2 AB 8 PHE G 173 SER G 182 -1 O TRP G 181 N TYR G 159 SHEET 3 AB 8 VAL G 138 THR G 142 -1 N CYS G 139 O ALA G 180 SHEET 4 AB 8 ALA G 124 ASP G 130 -1 N ALA G 124 O THR G 142 SHEET 5 AB 8 GLU H 127 GLU H 132 -1 O GLU H 132 N ARG G 129 SHEET 6 AB 8 LYS H 143 PHE H 153 -1 O VAL H 147 N PHE H 131 SHEET 7 AB 8 TYR H 191 SER H 200 -1 O LEU H 193 N ALA H 150 SHEET 8 AB 8 VAL H 173 THR H 175 -1 N CYS H 174 O ARG H 196 SHEET 1 AC 8 CYS G 164 MET G 168 0 SHEET 2 AC 8 PHE G 173 SER G 182 -1 O PHE G 173 N MET G 168 SHEET 3 AC 8 VAL G 138 THR G 142 -1 N CYS G 139 O ALA G 180 SHEET 4 AC 8 ALA G 124 ASP G 130 -1 N ALA G 124 O THR G 142 SHEET 5 AC 8 GLU H 127 GLU H 132 -1 O GLU H 132 N ARG G 129 SHEET 6 AC 8 LYS H 143 PHE H 153 -1 O VAL H 147 N PHE H 131 SHEET 7 AC 8 TYR H 191 SER H 200 -1 O LEU H 193 N ALA H 150 SHEET 8 AC 8 LEU H 180 LYS H 181 -1 N LEU H 180 O ALA H 192 SHEET 1 AD 4 ILE H 4 THR H 7 0 SHEET 2 AD 4 ILE H 19 GLN H 25 -1 O SER H 24 N TYR H 5 SHEET 3 AD 4 LEU H 77 LEU H 79 -1 O LEU H 77 N LEU H 21 SHEET 4 AD 4 THR H 66 VAL H 67 -1 N THR H 66 O THR H 78 SHEET 1 AE 6 TYR H 10 GLY H 14 0 SHEET 2 AE 6 THR H 112 THR H 117 1 O ARG H 113 N LEU H 11 SHEET 3 AE 6 SER H 88 LEU H 97 -1 N TYR H 90 O THR H 112 SHEET 4 AE 6 LYS H 31 GLN H 37 -1 N TYR H 35 O LEU H 91 SHEET 5 AE 6 HIS H 44 SER H 49 -1 O ILE H 46 N TRP H 34 SHEET 6 AE 6 GLU H 56 LYS H 57 -1 O GLU H 56 N TYR H 48 SHEET 1 AF 4 TYR H 10 GLY H 14 0 SHEET 2 AF 4 THR H 112 THR H 117 1 O ARG H 113 N LEU H 11 SHEET 3 AF 4 SER H 88 LEU H 97 -1 N TYR H 90 O THR H 112 SHEET 4 AF 4 TYR H 103 PHE H 108 -1 O GLU H 105 N GLY H 96 SHEET 1 AG 4 LYS H 167 VAL H 169 0 SHEET 2 AG 4 VAL H 158 VAL H 164 -1 N TRP H 162 O VAL H 169 SHEET 3 AG 4 HIS H 210 PHE H 217 -1 O GLN H 216 N GLU H 159 SHEET 4 AG 4 GLN H 236 TRP H 243 -1 O GLN H 236 N PHE H 217 SSBOND 1 CYS A 102 CYS A 166 1555 1555 2.05 SSBOND 2 CYS A 206 CYS A 261 1555 1555 2.03 SSBOND 3 CYS B 25 CYS B 80 1555 1555 2.03 SSBOND 4 CYS C 102 CYS C 166 1555 1555 2.05 SSBOND 5 CYS C 206 CYS C 261 1555 1555 2.03 SSBOND 6 CYS D 25 CYS D 80 1555 1555 2.03 SSBOND 7 CYS E 22 CYS E 90 1555 1555 2.03 SSBOND 8 CYS E 139 CYS E 189 1555 1555 2.04 SSBOND 9 CYS E 164 CYS F 174 1555 1555 2.03 SSBOND 10 CYS F 23 CYS F 92 1555 1555 2.02 SSBOND 11 CYS F 148 CYS F 213 1555 1555 2.02 SSBOND 12 CYS G 22 CYS G 90 1555 1555 2.04 SSBOND 13 CYS G 139 CYS G 189 1555 1555 2.04 SSBOND 14 CYS G 164 CYS H 174 1555 1555 2.04 SSBOND 15 CYS H 23 CYS H 92 1555 1555 2.01 SSBOND 16 CYS H 148 CYS H 213 1555 1555 2.03 LINK ND2 ASN A 20 C1 NAG A2000 1555 1555 1.45 LINK ND2 ASN A 42 C1 NAG I 1 1555 1555 1.44 LINK ND2 ASN C 20 C1 NAG C2000 1555 1555 1.45 LINK ND2 ASN C 42 C1 NAG J 1 1555 1555 1.45 LINK O4 NAG I 1 C1 BMA I 2 1555 1555 1.44 LINK O4 NAG J 1 C1 NDG J 2 1555 1555 1.45 LINK O3 NDG J 2 C1 BMA J 3 1555 1555 1.45 CISPEP 1 TYR A 92 PRO A 93 0 0.61 CISPEP 2 GLY A 198 PRO A 199 0 1.00 CISPEP 3 PRO A 199 GLY A 200 0 -1.82 CISPEP 4 TYR A 212 PRO A 213 0 4.56 CISPEP 5 ALA A 253 GLY A 254 0 2.47 CISPEP 6 GLU A 255 ALA A 256 0 1.84 CISPEP 7 ALA A 256 ALA A 257 0 -1.55 CISPEP 8 SER A 267 LEU A 268 0 16.89 CISPEP 9 TRP A 277 HIS A 278 0 -0.60 CISPEP 10 HIS B 31 PRO B 32 0 2.88 CISPEP 11 TYR C 92 PRO C 93 0 3.29 CISPEP 12 PRO C 197 GLY C 198 0 -1.74 CISPEP 13 GLY C 198 PRO C 199 0 -2.50 CISPEP 14 PRO C 199 GLY C 200 0 -3.01 CISPEP 15 TYR C 212 PRO C 213 0 5.36 CISPEP 16 HIS D 31 PRO D 32 0 4.21 CISPEP 17 SER E 6 PRO E 7 0 -10.21 CISPEP 18 SER E 27 PRO E 28 0 -7.37 CISPEP 19 THR F 7 PRO F 8 0 -6.52 CISPEP 20 ARG F 98 ASP F 99 0 -3.61 CISPEP 21 TYR F 154 PRO F 155 0 -6.18 CISPEP 22 SER G 6 PRO G 7 0 1.26 CISPEP 23 SER G 27 PRO G 28 0 1.46 CISPEP 24 SER G 134 ASP G 135 0 0.86 CISPEP 25 THR H 7 PRO H 8 0 -5.36 CISPEP 26 TYR H 154 PRO H 155 0 0.31 CRYST1 112.112 82.360 117.184 90.00 101.26 90.00 P 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008920 0.000000 0.001776 0.00000 SCALE2 0.000000 0.012142 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008701 0.00000