HEADER OXIDOREDUCTASE 23-JUN-09 3HZL TITLE TYR258PHE MUTANT OF NIKD, AN UNUSUAL AMINO ACID OXIDASE ESSENTIAL FOR TITLE 2 NIKKOMYCIN BIOSYNTHESIS: OPEN FORM AT 1.55A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: NIKD PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES TENDAE; SOURCE 3 ORGANISM_TAXID: 1932; SOURCE 4 STRAIN: TU501; SOURCE 5 GENE: NIKD; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS FLAVOPROTEIN, ROSSMANN FOLD, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR F.S.MATHEWS,M.S.JORNS,C.J.CARRELL REVDAT 3 06-SEP-23 3HZL 1 REMARK REVDAT 2 13-OCT-21 3HZL 1 REMARK SEQADV LINK ATOM REVDAT 1 20-OCT-09 3HZL 0 JRNL AUTH P.R.KOMMOJU,R.C.BRUCKNER,P.FERREIRA,C.J.CARRELL,F.S.MATHEWS, JRNL AUTH 2 M.S.JORNS JRNL TITL FACTORS THAT AFFECT OXYGEN ACTIVATION AND COUPLING OF THE JRNL TITL 2 TWO REDOX CYCLES IN THE AROMATIZATION REACTION CATALYZED BY JRNL TITL 3 NIKD, AN UNUSUAL AMINO ACID OXIDASE. JRNL REF BIOCHEMISTRY V. 48 9542 2009 JRNL REFN ISSN 0006-2960 JRNL PMID 19702312 JRNL DOI 10.1021/BI901056A REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.89 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1505749.610 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 85842 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4308 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.65 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 13354 REMARK 3 BIN R VALUE (WORKING SET) : 0.3110 REMARK 3 BIN FREE R VALUE : 0.3380 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.80 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 679 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.013 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3088 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 86 REMARK 3 SOLVENT ATOMS : 416 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.72000 REMARK 3 B22 (A**2) : 0.44000 REMARK 3 B33 (A**2) : -2.16000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -3.29000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.22 REMARK 3 ESD FROM SIGMAA (A) : 0.22 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.24 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.23 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.786 REMARK 3 BOND ANGLES (DEGREES) : 5.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.480 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 49.30 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : FAD_XPLOR.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : BEZ_XPLOR.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : FAD_XPLOR.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : BEZ_XPLOR.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED REMARK 4 REMARK 4 3HZL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-JUN-09. REMARK 100 THE DEPOSITION ID IS D_1000053777. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JUN-08 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 7.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-BM-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : GE(111) CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 86058 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : 0.40100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 2OLO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4 ML OF THE TYR258PHE MUTANT PROTEIN REMARK 280 (AT 10 MG/ML) WAS MIXED WITH 4 ML 20-30% 2-METHYL-2,4- REMARK 280 PENTANEDIOL (MPD) IN 100 MM MES BUFFER (PH 5.7) AND EQUILIBRATED REMARK 280 AGAINST A RESERVOIR OF THE LATTER SOLUTION, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 298.0K, PH 7.6 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 44.19500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.26500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 44.19500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 45.26500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -85.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -88.39000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1059 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1114 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 HIS A 396 REMARK 465 HIS A 397 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 153 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 36 -130.53 -108.04 REMARK 500 PRO A 309 1.28 -67.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 398 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 6PC A 399 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2OLO RELATED DB: PDB REMARK 900 NIKD, AN UNUSUAL AMINO ACID OXIDASE ESSENTIAL FOR NIKKOMYCIN REMARK 900 BIOSYNTHESIS: OPEN FORM AT 1.9A RESOLUTION REMARK 900 RELATED ID: 2OLN RELATED DB: PDB REMARK 900 NIKD, AN UNUSUAL AMINO ACID OXIDASE ESSENTIAL FOR NIKKOMYCIN REMARK 900 BIOSYNTHESIS: CLOSED FORM AT 1.15 A RESOLUTION DBREF 3HZL A 1 389 UNP Q9X9P9 Q9X9P9_STRTE 1 389 SEQADV 3HZL PHE A 258 UNP Q9X9P9 TYR 258 ENGINEERED MUTATION SEQADV 3HZL LEU A 390 UNP Q9X9P9 EXPRESSION TAG SEQADV 3HZL GLU A 391 UNP Q9X9P9 EXPRESSION TAG SEQADV 3HZL HIS A 392 UNP Q9X9P9 EXPRESSION TAG SEQADV 3HZL HIS A 393 UNP Q9X9P9 EXPRESSION TAG SEQADV 3HZL HIS A 394 UNP Q9X9P9 EXPRESSION TAG SEQADV 3HZL HIS A 395 UNP Q9X9P9 EXPRESSION TAG SEQADV 3HZL HIS A 396 UNP Q9X9P9 EXPRESSION TAG SEQADV 3HZL HIS A 397 UNP Q9X9P9 EXPRESSION TAG SEQRES 1 A 397 MET THR GLU SER TYR ASP VAL VAL VAL VAL GLY GLY GLY SEQRES 2 A 397 PRO VAL GLY LEU ALA THR ALA TRP GLN VAL ALA GLU ARG SEQRES 3 A 397 GLY HIS ARG VAL LEU VAL LEU GLU ARG HIS THR PHE PHE SEQRES 4 A 397 ASN GLU ASN GLY GLY THR SER GLY ALA GLU ARG HIS TRP SEQRES 5 A 397 ARG LEU GLN TYR THR GLN GLU ASP LEU PHE ARG LEU THR SEQRES 6 A 397 LEU GLU THR LEU PRO LEU TRP ARG ALA LEU GLU SER ARG SEQRES 7 A 397 CYS GLU ARG ARG LEU ILE HIS GLU ILE GLY SER LEU TRP SEQRES 8 A 397 PHE GLY ASP THR ASP VAL VAL THR ASN GLU GLY GLN ILE SEQRES 9 A 397 SER GLY THR ALA ALA MET MET ASP LYS LEU SER VAL ARG SEQRES 10 A 397 TYR GLU TRP LEU LYS ALA THR ASP ILE GLU ARG ARG PHE SEQRES 11 A 397 GLY PHE ARG GLY LEU PRO ARG ASP TYR GLU GLY PHE LEU SEQRES 12 A 397 GLN PRO ASP GLY GLY THR ILE ASP VAL ARG GLY THR LEU SEQRES 13 A 397 ALA ALA LEU PHE THR LEU ALA GLN ALA ALA GLY ALA THR SEQRES 14 A 397 LEU ARG ALA GLY GLU THR VAL THR GLU LEU VAL PRO ASP SEQRES 15 A 397 ALA ASP GLY VAL SER VAL THR THR ASP ARG GLY THR TYR SEQRES 16 A 397 ARG ALA GLY LYS VAL VAL LEU ALA CYS GLY PRO TYR THR SEQRES 17 A 397 ASN ASP LEU LEU GLU PRO LEU GLY ALA ARG LEU ALA TYR SEQRES 18 A 397 SER VAL TYR GLU MET ALA ILE ALA ALA TYR ARG GLN ALA SEQRES 19 A 397 THR PRO VAL THR GLU ALA PRO PHE TRP PHE ALA PHE GLN SEQRES 20 A 397 GLN PRO THR PRO GLN ASP THR ASN LEU PHE PHE GLY PHE SEQRES 21 A 397 GLY HIS ASN PRO TRP ALA PRO GLY GLU PHE VAL ARG CYS SEQRES 22 A 397 GLY PRO ASP PHE GLU VAL ASP PRO LEU ASP HIS PRO SER SEQRES 23 A 397 ALA ALA THR GLY VAL ALA ASP ARG ARG GLN MET ASP ARG SEQRES 24 A 397 LEU SER GLY TRP LEU ARG ASP HIS LEU PRO THR VAL ASP SEQRES 25 A 397 PRO ASP PRO VAL ARG THR SER THR CYS LEU ALA VAL LEU SEQRES 26 A 397 PRO THR ASP PRO GLU ARG GLN PHE PHE LEU GLY THR ALA SEQRES 27 A 397 ARG ASP LEU MET THR HIS GLY GLU LYS LEU VAL VAL TYR SEQRES 28 A 397 GLY ALA GLY TRP ALA PHE LYS PHE VAL PRO LEU PHE GLY SEQRES 29 A 397 ARG ILE CYS ALA ASP LEU ALA VAL GLU ASP SER THR ALA SEQRES 30 A 397 TYR ASP ILE SER ARG LEU ALA PRO GLN SER ALA LEU LEU SEQRES 31 A 397 GLU HIS HIS HIS HIS HIS HIS HET FAD A 398 53 HET 6PC A 399 9 HET MPD A 400 8 HET MPD A 401 8 HET MPD A 402 8 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM 6PC PYRIDINE-2-CARBOXYLIC ACID HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETSYN 6PC PICOLINIC ACID FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 6PC C6 H5 N O2 FORMUL 4 MPD 3(C6 H14 O2) FORMUL 7 HOH *416(H2 O) HELIX 1 1 GLY A 13 ARG A 26 1 14 HELIX 2 2 GLN A 58 GLU A 80 1 23 HELIX 3 3 GLN A 103 SER A 115 1 13 HELIX 4 4 ALA A 123 GLY A 131 1 9 HELIX 5 5 VAL A 152 ALA A 166 1 15 HELIX 6 6 CYS A 204 PRO A 206 5 3 HELIX 7 7 TYR A 207 GLU A 213 1 7 HELIX 8 8 PRO A 214 GLY A 216 5 3 HELIX 9 9 HIS A 284 ALA A 288 5 5 HELIX 10 10 ASP A 293 LEU A 308 1 16 HELIX 11 11 HIS A 344 GLU A 346 5 3 HELIX 12 12 ALA A 356 LYS A 358 5 3 HELIX 13 13 PHE A 359 GLU A 373 1 15 HELIX 14 14 ILE A 380 ALA A 384 5 5 SHEET 1 A 6 THR A 169 ARG A 171 0 SHEET 2 A 6 VAL A 30 LEU A 33 1 N VAL A 32 O THR A 169 SHEET 3 A 6 GLU A 3 VAL A 10 1 N VAL A 9 O LEU A 31 SHEET 4 A 6 THR A 194 LEU A 202 1 O VAL A 201 N VAL A 10 SHEET 5 A 6 GLY A 185 THR A 190 -1 N VAL A 186 O ALA A 197 SHEET 6 A 6 VAL A 176 ASP A 182 -1 N GLU A 178 O THR A 189 SHEET 1 B 6 THR A 169 ARG A 171 0 SHEET 2 B 6 VAL A 30 LEU A 33 1 N VAL A 32 O THR A 169 SHEET 3 B 6 GLU A 3 VAL A 10 1 N VAL A 9 O LEU A 31 SHEET 4 B 6 THR A 194 LEU A 202 1 O VAL A 201 N VAL A 10 SHEET 5 B 6 LEU A 348 ALA A 353 1 O VAL A 349 N LEU A 202 SHEET 6 B 6 PHE A 334 THR A 337 -1 N GLY A 336 O VAL A 350 SHEET 1 C 3 GLU A 49 TRP A 52 0 SHEET 2 C 3 GLY A 148 ASP A 151 -1 O GLY A 148 N TRP A 52 SHEET 3 C 3 ILE A 84 GLU A 86 -1 N HIS A 85 O THR A 149 SHEET 1 D 8 GLU A 119 LYS A 122 0 SHEET 2 D 8 GLU A 140 GLN A 144 -1 O GLY A 141 N LEU A 121 SHEET 3 D 8 SER A 89 GLY A 93 -1 N SER A 89 O GLN A 144 SHEET 4 D 8 PHE A 242 PHE A 246 1 O PHE A 242 N LEU A 90 SHEET 5 D 8 PHE A 257 GLY A 259 -1 O PHE A 257 N ALA A 245 SHEET 6 D 8 PHE A 270 PRO A 275 -1 O GLY A 274 N PHE A 258 SHEET 7 D 8 TYR A 221 ARG A 232 -1 N ALA A 229 O CYS A 273 SHEET 8 D 8 ARG A 317 PRO A 326 -1 O LEU A 325 N SER A 222 LINK SG CYS A 321 C8M FAD A 398 1555 1555 1.73 SITE 1 AC1 36 GLY A 11 GLY A 13 PRO A 14 VAL A 15 SITE 2 AC1 36 LEU A 33 GLU A 34 ARG A 35 ASN A 40 SITE 3 AC1 36 GLY A 43 GLY A 44 THR A 45 ARG A 50 SITE 4 AC1 36 HIS A 51 GLU A 174 VAL A 176 ALA A 203 SITE 5 AC1 36 CYS A 204 GLY A 205 TYR A 207 PHE A 260 SITE 6 AC1 36 CYS A 321 LEU A 322 TYR A 351 GLY A 354 SITE 7 AC1 36 TRP A 355 ALA A 356 PHE A 357 LYS A 358 SITE 8 AC1 36 6PC A 399 HOH A1001 HOH A1006 HOH A1008 SITE 9 AC1 36 HOH A1014 HOH A1017 HOH A1021 HOH A1026 SITE 1 AC2 9 ARG A 53 GLU A 101 PHE A 258 TRP A 355 SITE 2 AC2 9 FAD A 398 MPD A 400 HOH A1035 HOH A1065 SITE 3 AC2 9 HOH A1233 SITE 1 AC3 7 ASN A 100 GLU A 101 ASP A 276 TRP A 355 SITE 2 AC3 7 6PC A 399 MPD A 401 HOH A1174 SITE 1 AC4 6 ASN A 100 TYR A 224 MPD A 400 HOH A1046 SITE 2 AC4 6 HOH A1176 HOH A1296 SITE 1 AC5 5 LEU A 69 ARG A 73 GLU A 86 ASP A 146 SITE 2 AC5 5 HOH A1408 CRYST1 88.390 90.530 85.970 90.00 118.36 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011313 0.000000 0.006107 0.00000 SCALE2 0.000000 0.011046 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013218 0.00000