HEADER CELL CYCLE 25-JUN-09 3I0M TITLE STRUCTURE OF THE S. POMBE NBS1 FHA/BRCT-REPEAT DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA REPAIR AND TELOMERE MAINTENANCE PROTEIN NBS1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: N-TERMINAL FHA/BRCT-REPEAT DOMAIN, UNP RESIDUES 1-324; COMPND 5 SYNONYM: NBS1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SCHIZOSACCHAROMYCES POMBE; SOURCE 3 ORGANISM_COMMON: FISSION YEAST; SOURCE 4 ORGANISM_TAXID: 4896; SOURCE 5 GENE: NBS1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS FHA, BRCT-REPEAT, DNA-DAMAGE, CHROMOSOMAL PROTEIN, DNA DAMAGE, DNA KEYWDS 2 REPAIR, NUCLEUS, PHOSPHOPROTEIN, TELOMERE, GENE REGULATION, CELL KEYWDS 3 CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR J.A.CLAPPERTON,J.LLOYD,J.R.CHAPMAN,S.P.JACKSON,S.J.SMERDON REVDAT 4 16-OCT-24 3I0M 1 REMARK LINK REVDAT 3 02-MAY-12 3I0M 1 JRNL REVDAT 2 13-JUL-11 3I0M 1 VERSN REVDAT 1 13-OCT-09 3I0M 0 JRNL AUTH J.LLOYD,J.R.CHAPMAN,J.A.CLAPPERTON,L.F.HAIRE,E.HARTSUIKER, JRNL AUTH 2 J.LI,A.M.CARR,S.P.JACKSON,S.J.SMERDON JRNL TITL A SUPRAMODULAR FHA/BRCT-REPEAT ARCHITECTURE MEDIATES NBS1 JRNL TITL 2 ADAPTOR FUNCTION IN RESPONSE TO DNA DAMAGE JRNL REF CELL(CAMBRIDGE,MASS.) V. 139 100 2009 JRNL REFN ISSN 0092-8674 JRNL PMID 19804756 JRNL DOI 10.1016/J.CELL.2009.07.043 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0088 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 9883 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 488 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 692 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2640 REMARK 3 BIN FREE R VALUE SET COUNT : 38 REMARK 3 BIN FREE R VALUE : 0.3280 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2531 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 42 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.27 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.21000 REMARK 3 B22 (A**2) : 0.60000 REMARK 3 B33 (A**2) : -0.39000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.363 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.271 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 27.619 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.922 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2605 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3517 ; 1.198 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 324 ; 6.148 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 114 ;39.410 ;25.175 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 491 ;18.069 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;13.496 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 398 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1914 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1598 ; 0.426 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2601 ; 0.814 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1007 ; 1.253 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 914 ; 1.979 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 114 REMARK 3 ORIGIN FOR THE GROUP (A): 46.1880 18.1780 64.7790 REMARK 3 T TENSOR REMARK 3 T11: 0.2664 T22: 0.3897 REMARK 3 T33: 0.2582 T12: 0.1122 REMARK 3 T13: -0.0351 T23: -0.0023 REMARK 3 L TENSOR REMARK 3 L11: 2.3937 L22: 2.0795 REMARK 3 L33: 7.1992 L12: -0.0398 REMARK 3 L13: 0.2966 L23: -0.2419 REMARK 3 S TENSOR REMARK 3 S11: -0.2945 S12: -0.5316 S13: -0.0113 REMARK 3 S21: 0.2387 S22: 0.1822 S23: -0.1227 REMARK 3 S31: -0.2242 S32: -0.0006 S33: 0.1123 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 115 A 216 REMARK 3 ORIGIN FOR THE GROUP (A): 43.1430 11.0220 41.2410 REMARK 3 T TENSOR REMARK 3 T11: 0.2826 T22: 0.2482 REMARK 3 T33: 0.3672 T12: -0.0246 REMARK 3 T13: -0.0033 T23: -0.0114 REMARK 3 L TENSOR REMARK 3 L11: 0.9329 L22: 1.6199 REMARK 3 L33: 4.6277 L12: -0.1821 REMARK 3 L13: -0.3073 L23: -0.4892 REMARK 3 S TENSOR REMARK 3 S11: -0.0220 S12: 0.0009 S13: -0.1625 REMARK 3 S21: -0.0334 S22: -0.0173 S23: 0.0824 REMARK 3 S31: 0.0503 S32: 0.0648 S33: 0.0394 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 217 A 319 REMARK 3 ORIGIN FOR THE GROUP (A): 52.1840 15.9730 13.7960 REMARK 3 T TENSOR REMARK 3 T11: 0.2735 T22: 0.3983 REMARK 3 T33: 0.2289 T12: -0.0812 REMARK 3 T13: -0.0789 T23: 0.0436 REMARK 3 L TENSOR REMARK 3 L11: 4.6216 L22: 6.8303 REMARK 3 L33: 11.2549 L12: 0.7705 REMARK 3 L13: -1.0572 L23: -3.1987 REMARK 3 S TENSOR REMARK 3 S11: -0.2765 S12: 0.8007 S13: 0.1180 REMARK 3 S21: -0.4068 S22: -0.2000 S23: -0.1534 REMARK 3 S31: 0.2192 S32: 0.2901 S33: 0.4765 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3I0M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 29-JUN-09. REMARK 100 THE DEPOSITION ID IS D_1000053814. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-MAR-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9698 REMARK 200 MONOCHROMATOR : 0.97 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19822 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.60 REMARK 200 R MERGE (I) : 0.09700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 0.45000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 8% PEG6000, 0.1M MES, 0.1M MGCL2, REMARK 280 PH6.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 27.76150 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.19250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.76150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.19250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 320 REMARK 465 THR A 321 REMARK 465 ALA A 322 REMARK 465 SER A 323 REMARK 465 ASN A 324 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 7 40.17 -97.58 REMARK 500 SER A 30 -152.39 -98.99 REMARK 500 GLU A 83 -3.47 66.61 REMARK 500 GLN A 88 -120.87 56.74 REMARK 500 SER A 159 -169.26 -111.10 REMARK 500 LYS A 172 15.19 80.02 REMARK 500 ASN A 235 -89.13 62.33 REMARK 500 THR A 236 164.81 63.00 REMARK 500 LEU A 257 -23.44 80.21 REMARK 500 SER A 306 -62.65 -16.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 325 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3I0N RELATED DB: PDB DBREF 3I0M A 1 324 UNP O43070 NBS1_SCHPO 1 324 SEQRES 1 A 324 MSE TRP ILE ILE GLU ALA GLU GLY ASP ILE LEU LYS GLY SEQRES 2 A 324 LYS SER ARG ILE LEU PHE PRO GLY THR TYR ILE VAL GLY SEQRES 3 A 324 ARG ASN VAL SER ASP ASP SER SER HIS ILE GLN VAL ILE SEQRES 4 A 324 SER LYS SER ILE SER LYS ARG HIS ALA ARG PHE THR ILE SEQRES 5 A 324 LEU THR PRO SER GLU LYS ASP TYR PHE THR GLY GLY PRO SEQRES 6 A 324 CYS GLU PHE GLU VAL LYS ASP LEU ASP THR LYS PHE GLY SEQRES 7 A 324 THR LYS VAL ASN GLU LYS VAL VAL GLY GLN ASN GLY ASP SEQRES 8 A 324 SER TYR LYS GLU LYS ASP LEU LYS ILE GLN LEU GLY LYS SEQRES 9 A 324 CYS PRO PHE THR ILE ASN ALA TYR TRP ARG SER MSE CYS SEQRES 10 A 324 ILE GLN PHE ASP ASN PRO GLU MSE LEU SER GLN TRP ALA SEQRES 11 A 324 SER ASN LEU ASN LEU LEU GLY ILE PRO THR GLY LEU ARG SEQRES 12 A 324 ASP SER ASP ALA THR THR HIS PHE VAL MSE ASN ARG GLN SEQRES 13 A 324 ALA GLY SER SER ILE THR VAL GLY THR MSE TYR ALA PHE SEQRES 14 A 324 LEU LYS LYS THR VAL ILE ILE ASP ASP SER TYR LEU GLN SEQRES 15 A 324 TYR LEU SER THR VAL LYS GLU SER VAL ILE GLU ASP ALA SEQRES 16 A 324 SER LEU MSE PRO ASP ALA LEU GLU CYS PHE LYS ASN ILE SEQRES 17 A 324 ILE LYS ASN ASN ASP GLN PHE PRO SER SER PRO GLU ASP SEQRES 18 A 324 CYS ILE ASN SER LEU GLU GLY PHE SER CYS ALA MSE LEU SEQRES 19 A 324 ASN THR SER SER GLU SER HIS HIS LEU LEU GLU LEU LEU SEQRES 20 A 324 GLY LEU ARG ILE SER THR PHE MSE SER LEU GLY ASP ILE SEQRES 21 A 324 ASP LYS GLU LEU ILE SER LYS THR ASP PHE VAL VAL LEU SEQRES 22 A 324 ASN ASN ALA VAL TYR ASP SER GLU LYS ILE SER PHE PRO SEQRES 23 A 324 GLU GLY ILE PHE CYS LEU THR ILE GLU GLN LEU TRP LYS SEQRES 24 A 324 ILE ILE ILE GLU ARG ASN SER ARG GLU LEU ILE SER LYS SEQRES 25 A 324 GLU ILE GLU ARG LEU LYS TYR ALA THR ALA SER ASN MODRES 3I0M MSE A 1 MET SELENOMETHIONINE MODRES 3I0M MSE A 116 MET SELENOMETHIONINE MODRES 3I0M MSE A 125 MET SELENOMETHIONINE MODRES 3I0M MSE A 153 MET SELENOMETHIONINE MODRES 3I0M MSE A 166 MET SELENOMETHIONINE MODRES 3I0M MSE A 198 MET SELENOMETHIONINE MODRES 3I0M MSE A 233 MET SELENOMETHIONINE MODRES 3I0M MSE A 255 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 116 8 HET MSE A 125 16 HET MSE A 153 8 HET MSE A 166 8 HET MSE A 198 8 HET MSE A 233 8 HET MSE A 255 13 HET GOL A 325 6 HETNAM MSE SELENOMETHIONINE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 2 GOL C3 H8 O3 FORMUL 3 HOH *42(H2 O) HELIX 1 1 LYS A 58 GLY A 63 1 6 HELIX 2 2 ASN A 122 LEU A 136 1 15 HELIX 3 3 THR A 162 LYS A 171 1 10 HELIX 4 4 ASP A 177 VAL A 187 1 11 HELIX 5 5 VAL A 187 ASP A 194 1 8 HELIX 6 6 ALA A 195 MSE A 198 5 4 HELIX 7 7 ASP A 200 ASN A 212 1 13 HELIX 8 8 SER A 218 ILE A 223 1 6 HELIX 9 9 SER A 237 LEU A 247 1 11 HELIX 10 10 ASP A 261 THR A 268 1 8 HELIX 11 11 ASN A 274 GLU A 281 1 8 HELIX 12 12 ILE A 294 GLU A 303 1 10 HELIX 13 13 ASN A 305 GLU A 315 1 11 SHEET 1 A 6 ARG A 16 LEU A 18 0 SHEET 2 A 6 TRP A 2 ALA A 6 -1 N TRP A 2 O LEU A 18 SHEET 3 A 6 ILE A 109 TRP A 113 -1 O ASN A 110 N GLU A 5 SHEET 4 A 6 ASP A 97 LEU A 102 -1 N ILE A 100 O ILE A 109 SHEET 5 A 6 THR A 79 VAL A 81 -1 N LYS A 80 O GLN A 101 SHEET 6 A 6 LYS A 84 VAL A 86 -1 O LYS A 84 N VAL A 81 SHEET 1 B 5 HIS A 35 GLN A 37 0 SHEET 2 B 5 GLY A 21 GLY A 26 1 N ILE A 24 O ILE A 36 SHEET 3 B 5 ALA A 48 ILE A 52 -1 O PHE A 50 N TYR A 23 SHEET 4 B 5 PHE A 68 ASP A 72 -1 O GLU A 69 N THR A 51 SHEET 5 B 5 ASP A 91 TYR A 93 -1 O ASP A 91 N VAL A 70 SHEET 1 C 4 THR A 140 GLY A 141 0 SHEET 2 C 4 ILE A 118 PHE A 120 1 N PHE A 120 O GLY A 141 SHEET 3 C 4 HIS A 150 VAL A 152 1 O VAL A 152 N GLN A 119 SHEET 4 C 4 VAL A 174 ILE A 176 1 O ILE A 176 N PHE A 151 SHEET 1 D 4 ARG A 250 SER A 252 0 SHEET 2 D 4 SER A 230 MSE A 233 1 N CYS A 231 O ARG A 250 SHEET 3 D 4 PHE A 270 LEU A 273 1 O VAL A 272 N ALA A 232 SHEET 4 D 4 PHE A 290 THR A 293 1 O PHE A 290 N VAL A 271 LINK C MSE A 1 N TRP A 2 1555 1555 1.33 LINK C SER A 115 N MSE A 116 1555 1555 1.33 LINK C MSE A 116 N CYS A 117 1555 1555 1.33 LINK C GLU A 124 N AMSE A 125 1555 1555 1.33 LINK C GLU A 124 N BMSE A 125 1555 1555 1.33 LINK C AMSE A 125 N LEU A 126 1555 1555 1.33 LINK C BMSE A 125 N LEU A 126 1555 1555 1.33 LINK C VAL A 152 N MSE A 153 1555 1555 1.33 LINK C MSE A 153 N ASN A 154 1555 1555 1.33 LINK C THR A 165 N MSE A 166 1555 1555 1.33 LINK C MSE A 166 N TYR A 167 1555 1555 1.33 LINK C LEU A 197 N MSE A 198 1555 1555 1.33 LINK C MSE A 198 N PRO A 199 1555 1555 1.35 LINK C ALA A 232 N MSE A 233 1555 1555 1.33 LINK C MSE A 233 N LEU A 234 1555 1555 1.33 LINK C PHE A 254 N MSE A 255 1555 1555 1.33 LINK C MSE A 255 N SER A 256 1555 1555 1.33 SITE 1 AC1 5 MSE A 1 ARG A 114 SER A 115 HIS A 150 SITE 2 AC1 5 PRO A 199 CRYST1 55.523 62.385 93.352 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018011 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016029 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010712 0.00000 HETATM 1 N MSE A 1 46.164 16.341 52.821 1.00 30.30 N HETATM 2 CA MSE A 1 45.838 15.499 54.008 1.00 30.82 C HETATM 3 C MSE A 1 46.757 15.763 55.204 1.00 30.06 C HETATM 4 O MSE A 1 47.974 15.945 55.047 1.00 29.99 O HETATM 5 CB MSE A 1 45.914 14.025 53.644 1.00 31.29 C HETATM 6 CG MSE A 1 45.032 13.635 52.493 1.00 34.86 C HETATM 7 SE MSE A 1 45.352 11.783 52.010 1.00 44.38 SE HETATM 8 CE MSE A 1 47.267 11.938 51.544 1.00 39.68 C