HEADER HYDROLASE 29-JUN-09 3I2J TITLE COCAINE ESTERASE, WILD TYPE, WITHOUT A LIGAND COMPND MOL_ID: 1; COMPND 2 MOLECULE: COCAINE ESTERASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.1.1.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODOCOCCUS SP. MB1 'BRESLER 1999'; SOURCE 3 ORGANISM_TAXID: 104109; SOURCE 4 STRAIN: MB1; SOURCE 5 GENE: COCE; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL-21 GOLD (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-22B(+) KEYWDS ALPHA/BETA HYDROLASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.J.G.TESMER,M.R.NANCE REVDAT 5 06-SEP-23 3I2J 1 REMARK SEQADV REVDAT 4 01-NOV-17 3I2J 1 REMARK REVDAT 3 13-JUL-11 3I2J 1 VERSN REVDAT 2 25-AUG-10 3I2J 1 JRNL REVDAT 1 16-JUN-10 3I2J 0 JRNL AUTH D.NARASIMHAN,M.R.NANCE,D.GAO,M.C.KO,J.MACDONALD,P.TAMBURI, JRNL AUTH 2 D.YOON,D.M.LANDRY,J.H.WOODS,C.G.ZHAN,J.J.TESMER,R.K.SUNAHARA JRNL TITL STRUCTURAL ANALYSIS OF THERMOSTABILIZING MUTATIONS OF JRNL TITL 2 COCAINE ESTERASE. JRNL REF PROTEIN ENG.DES.SEL. V. 23 537 2010 JRNL REFN ISSN 1741-0126 JRNL PMID 20436035 JRNL DOI 10.1093/PROTEIN/GZQ025 REMARK 2 REMARK 2 RESOLUTION. 2.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.01 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 49838 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.178 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2531 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.01 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.06 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3533 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.28 REMARK 3 BIN R VALUE (WORKING SET) : 0.1990 REMARK 3 BIN FREE R VALUE SET COUNT : 0 REMARK 3 BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4383 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 29 REMARK 3 SOLVENT ATOMS : 622 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.21000 REMARK 3 B22 (A**2) : -0.21000 REMARK 3 B33 (A**2) : 0.32000 REMARK 3 B12 (A**2) : -0.11000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.149 REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.071 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.491 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5003 ; 0.009 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6889 ; 1.146 ; 1.956 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 668 ; 6.032 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 228 ;33.740 ;23.684 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 758 ;11.975 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 40 ;12.812 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 758 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4007 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2225 ; 0.198 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3410 ; 0.300 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 560 ; 0.129 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 61 ; 0.175 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 45 ; 0.141 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3257 ; 0.511 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5164 ; 0.849 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2005 ; 1.212 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1724 ; 1.933 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 575 REMARK 3 RESIDUE RANGE : A 588 A 595 REMARK 3 RESIDUE RANGE : A 596 A 597 REMARK 3 ORIGIN FOR THE GROUP (A): 15.8080 64.8460 -0.2540 REMARK 3 T TENSOR REMARK 3 T11: -0.0260 T22: -0.0729 REMARK 3 T33: -0.0253 T12: 0.0147 REMARK 3 T13: 0.0257 T23: 0.0064 REMARK 3 L TENSOR REMARK 3 L11: 0.5470 L22: 0.4987 REMARK 3 L33: 0.5379 L12: 0.1752 REMARK 3 L13: 0.2184 L23: 0.0292 REMARK 3 S TENSOR REMARK 3 S11: 0.0399 S12: -0.0491 S13: 0.0150 REMARK 3 S21: 0.0444 S22: -0.0319 S23: 0.0782 REMARK 3 S31: 0.0611 S32: -0.0347 S33: -0.0079 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3I2J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JUL-09. REMARK 100 THE DEPOSITION ID IS D_1000053882. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-MAR-07 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49966 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 10.80 REMARK 200 R MERGE (I) : 0.12500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 11.00 REMARK 200 R MERGE FOR SHELL (I) : 0.58600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: DIFFERENCE FOURIER REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB: 1JU3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.83 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10MM TRIS PH 7.5, 25 MM NACL, 1.6 M REMARK 280 AMMONIUM SULFATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 148.15867 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 74.07933 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 111.11900 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 37.03967 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 185.19833 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 148.15867 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 74.07933 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 37.03967 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 111.11900 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 185.19833 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -106.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 -52.90050 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 91.62635 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -37.03967 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 808 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LEU A 576 REMARK 465 ALA A 577 REMARK 465 ALA A 578 REMARK 465 ALA A 579 REMARK 465 LEU A 580 REMARK 465 GLU A 581 REMARK 465 HIS A 582 REMARK 465 HIS A 583 REMARK 465 HIS A 584 REMARK 465 HIS A 585 REMARK 465 HIS A 586 REMARK 465 HIS A 587 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PRO A 354 O HOH A 740 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 45 105.42 76.52 REMARK 500 SER A 56 -85.96 -130.81 REMARK 500 SER A 56 -85.96 -136.92 REMARK 500 PHE A 78 -120.22 48.35 REMARK 500 HIS A 87 -39.84 74.64 REMARK 500 SER A 117 -115.46 59.08 REMARK 500 TYR A 152 -118.98 -118.40 REMARK 500 ASP A 198 66.75 -157.55 REMARK 500 GLN A 224 -61.08 -95.30 REMARK 500 ASP A 277 98.55 -67.63 REMARK 500 PRO A 284 41.07 -87.38 REMARK 500 ASP A 355 26.58 82.78 REMARK 500 THR A 371 163.58 71.69 REMARK 500 ASN A 413 51.52 -146.37 REMARK 500 HIS A 422 17.81 -67.45 REMARK 500 LEU A 476 -105.70 -104.08 REMARK 500 LEU A 508 -121.12 61.10 REMARK 500 SER A 525 -159.41 -155.66 REMARK 500 ASN A 528 82.50 -165.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 588 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 589 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 590 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 591 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 592 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 593 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 594 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 596 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 597 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1JU3 RELATED DB: PDB REMARK 900 WILD-TYPE PROTEIN, IN COMPLEX WITH TRANSITION STATE ANALOG. REMARK 900 RELATED ID: 1JU4 RELATED DB: PDB REMARK 900 WILD-TYPE PROTEIN, IN COMPLEX WITH PRODUCT. REMARK 900 RELATED ID: 1L7R RELATED DB: PDB REMARK 900 COCAINE ESTERASE, WITH MUTATION Y44F. REMARK 900 RELATED ID: 1L7Q RELATED DB: PDB REMARK 900 COCAINE ESTERASE, WITH MUTATION S117A. REMARK 900 RELATED ID: 3I2F RELATED DB: PDB REMARK 900 RELATED ID: 3I2G RELATED DB: PDB REMARK 900 RELATED ID: 3I2H RELATED DB: PDB REMARK 900 RELATED ID: 3I2I RELATED DB: PDB REMARK 900 RELATED ID: 3I2K RELATED DB: PDB DBREF 3I2J A 1 574 UNP Q9L9D7 COCE_RHOSM 1 574 SEQADV 3I2J LYS A 575 UNP Q9L9D7 EXPRESSION TAG SEQADV 3I2J LEU A 576 UNP Q9L9D7 EXPRESSION TAG SEQADV 3I2J ALA A 577 UNP Q9L9D7 EXPRESSION TAG SEQADV 3I2J ALA A 578 UNP Q9L9D7 EXPRESSION TAG SEQADV 3I2J ALA A 579 UNP Q9L9D7 EXPRESSION TAG SEQADV 3I2J LEU A 580 UNP Q9L9D7 EXPRESSION TAG SEQADV 3I2J GLU A 581 UNP Q9L9D7 EXPRESSION TAG SEQADV 3I2J HIS A 582 UNP Q9L9D7 EXPRESSION TAG SEQADV 3I2J HIS A 583 UNP Q9L9D7 EXPRESSION TAG SEQADV 3I2J HIS A 584 UNP Q9L9D7 EXPRESSION TAG SEQADV 3I2J HIS A 585 UNP Q9L9D7 EXPRESSION TAG SEQADV 3I2J HIS A 586 UNP Q9L9D7 EXPRESSION TAG SEQADV 3I2J HIS A 587 UNP Q9L9D7 EXPRESSION TAG SEQRES 1 A 587 MET VAL ASP GLY ASN TYR SER VAL ALA SER ASN VAL MET SEQRES 2 A 587 VAL PRO MET ARG ASP GLY VAL ARG LEU ALA VAL ASP LEU SEQRES 3 A 587 TYR ARG PRO ASP ALA ASP GLY PRO VAL PRO VAL LEU LEU SEQRES 4 A 587 VAL ARG ASN PRO TYR ASP LYS PHE ASP VAL PHE ALA TRP SEQRES 5 A 587 SER THR GLN SER THR ASN TRP LEU GLU PHE VAL ARG ASP SEQRES 6 A 587 GLY TYR ALA VAL VAL ILE GLN ASP THR ARG GLY LEU PHE SEQRES 7 A 587 ALA SER GLU GLY GLU PHE VAL PRO HIS VAL ASP ASP GLU SEQRES 8 A 587 ALA ASP ALA GLU ASP THR LEU SER TRP ILE LEU GLU GLN SEQRES 9 A 587 ALA TRP CYS ASP GLY ASN VAL GLY MET PHE GLY VAL SER SEQRES 10 A 587 TYR LEU GLY VAL THR GLN TRP GLN ALA ALA VAL SER GLY SEQRES 11 A 587 VAL GLY GLY LEU LYS ALA ILE ALA PRO SER MET ALA SER SEQRES 12 A 587 ALA ASP LEU TYR ARG ALA PRO TRP TYR GLY PRO GLY GLY SEQRES 13 A 587 ALA LEU SER VAL GLU ALA LEU LEU GLY TRP SER ALA LEU SEQRES 14 A 587 ILE GLY THR GLY LEU ILE THR SER ARG SER ASP ALA ARG SEQRES 15 A 587 PRO GLU ASP ALA ALA ASP PHE VAL GLN LEU ALA ALA ILE SEQRES 16 A 587 LEU ASN ASP VAL ALA GLY ALA ALA SER VAL THR PRO LEU SEQRES 17 A 587 ALA GLU GLN PRO LEU LEU GLY ARG LEU ILE PRO TRP VAL SEQRES 18 A 587 ILE ASP GLN VAL VAL ASP HIS PRO ASP ASN ASP GLU SER SEQRES 19 A 587 TRP GLN SER ILE SER LEU PHE GLU ARG LEU GLY GLY LEU SEQRES 20 A 587 ALA THR PRO ALA LEU ILE THR ALA GLY TRP TYR ASP GLY SEQRES 21 A 587 PHE VAL GLY GLU SER LEU ARG THR PHE VAL ALA VAL LYS SEQRES 22 A 587 ASP ASN ALA ASP ALA ARG LEU VAL VAL GLY PRO TRP SER SEQRES 23 A 587 HIS SER ASN LEU THR GLY ARG ASN ALA ASP ARG LYS PHE SEQRES 24 A 587 GLY ILE ALA ALA THR TYR PRO ILE GLN GLU ALA THR THR SEQRES 25 A 587 MET HIS LYS ALA PHE PHE ASP ARG HIS LEU ARG GLY GLU SEQRES 26 A 587 THR ASP ALA LEU ALA GLY VAL PRO LYS VAL ARG LEU PHE SEQRES 27 A 587 VAL MET GLY ILE ASP GLU TRP ARG ASP GLU THR ASP TRP SEQRES 28 A 587 PRO LEU PRO ASP THR ALA TYR THR PRO PHE TYR LEU GLY SEQRES 29 A 587 GLY SER GLY ALA ALA ASN THR SER THR GLY GLY GLY THR SEQRES 30 A 587 LEU SER THR SER ILE SER GLY THR GLU SER ALA ASP THR SEQRES 31 A 587 TYR LEU TYR ASP PRO ALA ASP PRO VAL PRO SER LEU GLY SEQRES 32 A 587 GLY THR LEU LEU PHE HIS ASN GLY ASP ASN GLY PRO ALA SEQRES 33 A 587 ASP GLN ARG PRO ILE HIS ASP ARG ASP ASP VAL LEU CYS SEQRES 34 A 587 TYR SER THR GLU VAL LEU THR ASP PRO VAL GLU VAL THR SEQRES 35 A 587 GLY THR VAL SER ALA ARG LEU PHE VAL SER SER SER ALA SEQRES 36 A 587 VAL ASP THR ASP PHE THR ALA LYS LEU VAL ASP VAL PHE SEQRES 37 A 587 PRO ASP GLY ARG ALA ILE ALA LEU CYS ASP GLY ILE VAL SEQRES 38 A 587 ARG MET ARG TYR ARG GLU THR LEU VAL ASN PRO THR LEU SEQRES 39 A 587 ILE GLU ALA GLY GLU ILE TYR GLU VAL ALA ILE ASP MET SEQRES 40 A 587 LEU ALA THR SER ASN VAL PHE LEU PRO GLY HIS ARG ILE SEQRES 41 A 587 MET VAL GLN VAL SER SER SER ASN PHE PRO LYS TYR ASP SEQRES 42 A 587 ARG ASN SER ASN THR GLY GLY VAL ILE ALA ARG GLU GLN SEQRES 43 A 587 LEU GLU GLU MET CYS THR ALA VAL ASN ARG ILE HIS ARG SEQRES 44 A 587 GLY PRO GLU HIS PRO SER HIS ILE VAL LEU PRO ILE ILE SEQRES 45 A 587 LYS ARG LYS LEU ALA ALA ALA LEU GLU HIS HIS HIS HIS SEQRES 46 A 587 HIS HIS HET CL A 588 1 HET CL A 589 1 HET GOL A 590 6 HET GOL A 591 6 HET GOL A 592 6 HET SO4 A 593 5 HET CL A 594 1 HET CL A 595 1 HET CL A 596 1 HET CL A 597 1 HETNAM CL CHLORIDE ION HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 CL 6(CL 1-) FORMUL 4 GOL 3(C3 H8 O3) FORMUL 7 SO4 O4 S 2- FORMUL 12 HOH *622(H2 O) HELIX 1 1 VAL A 49 THR A 54 1 6 HELIX 2 2 TRP A 59 ASP A 65 1 7 HELIX 3 3 ASP A 89 GLN A 104 1 16 HELIX 4 4 SER A 117 VAL A 128 1 12 HELIX 5 5 SER A 159 ARG A 178 1 20 HELIX 6 6 GLU A 184 ASN A 197 1 14 HELIX 7 7 ASP A 198 VAL A 205 1 8 HELIX 8 8 GLN A 211 ILE A 218 1 8 HELIX 9 9 PRO A 219 GLN A 224 1 6 HELIX 10 10 ASP A 232 SER A 237 1 6 HELIX 11 11 LEU A 240 GLY A 245 1 6 HELIX 12 12 PHE A 261 LYS A 273 1 13 HELIX 13 13 GLY A 300 THR A 304 5 5 HELIX 14 14 PRO A 306 ARG A 323 1 18 HELIX 15 15 GLN A 418 HIS A 422 5 5 HELIX 16 16 ARG A 484 ARG A 486 5 3 HELIX 17 17 VAL A 541 GLU A 545 5 5 HELIX 18 18 GLN A 546 MET A 550 5 5 SHEET 1 A 6 TYR A 6 PRO A 15 0 SHEET 2 A 6 ARG A 21 PRO A 29 -1 O LEU A 22 N VAL A 14 SHEET 3 A 6 ALA A 68 ASP A 73 -1 O VAL A 69 N TYR A 27 SHEET 4 A 6 VAL A 35 ASN A 42 1 N LEU A 38 O VAL A 70 SHEET 5 A 6 CYS A 107 MET A 113 1 O GLY A 112 N LEU A 39 SHEET 6 A 6 LEU A 134 ALA A 136 1 O LYS A 135 N VAL A 111 SHEET 1 B 2 GLY A 115 VAL A 116 0 SHEET 2 B 2 PRO A 139 SER A 140 1 O SER A 140 N GLY A 115 SHEET 1 C 4 ALA A 251 TYR A 258 0 SHEET 2 C 4 ALA A 278 SER A 286 1 O ARG A 279 N ILE A 253 SHEET 3 C 4 VAL A 335 VAL A 339 1 O PHE A 338 N VAL A 282 SHEET 4 C 4 GLU A 344 GLU A 348 -1 O GLU A 344 N VAL A 339 SHEET 1 D 2 ARG A 293 ASN A 294 0 SHEET 2 D 2 ARG A 297 LYS A 298 -1 O ARG A 297 N ASN A 294 SHEET 1 E 6 THR A 377 SER A 379 0 SHEET 2 E 6 ALA A 357 GLY A 364 -1 N TYR A 362 O SER A 379 SHEET 3 E 6 HIS A 566 ILE A 572 -1 O LEU A 569 N THR A 359 SHEET 4 E 6 VAL A 439 SER A 453 -1 N SER A 446 O VAL A 568 SHEET 5 E 6 ALA A 553 ARG A 559 -1 O HIS A 558 N PHE A 450 SHEET 6 E 6 SER A 387 TYR A 393 -1 N SER A 387 O ARG A 559 SHEET 1 F 5 THR A 377 SER A 379 0 SHEET 2 F 5 ALA A 357 GLY A 364 -1 N TYR A 362 O SER A 379 SHEET 3 F 5 HIS A 566 ILE A 572 -1 O LEU A 569 N THR A 359 SHEET 4 F 5 VAL A 439 SER A 453 -1 N SER A 446 O VAL A 568 SHEET 5 F 5 TYR A 501 PHE A 514 -1 O ASN A 512 N VAL A 441 SHEET 1 G 4 CYS A 429 SER A 431 0 SHEET 2 G 4 ARG A 519 SER A 525 -1 O VAL A 522 N TYR A 430 SHEET 3 G 4 ASP A 459 VAL A 467 -1 N VAL A 465 O MET A 521 SHEET 4 G 4 ALA A 473 ARG A 482 -1 O CYS A 477 N LEU A 464 CISPEP 1 ALA A 149 PRO A 150 0 7.16 CISPEP 2 THR A 206 PRO A 207 0 -1.40 CISPEP 3 TRP A 351 PRO A 352 0 -5.04 CISPEP 4 PHE A 529 PRO A 530 0 7.26 SITE 1 AC1 2 LYS A 298 ARG A 472 SITE 1 AC2 3 TRP A 345 HOH A 748 HOH A1218 SITE 1 AC3 6 LEU A 196 VAL A 199 ARG A 293 PHE A 408 SITE 2 AC3 6 HIS A 409 ASN A 410 SITE 1 AC4 5 ASP A 394 ALA A 396 LEU A 547 MET A 550 SITE 2 AC4 5 HOH A 769 SITE 1 AC5 7 GLU A 309 ALA A 310 ARG A 336 TRP A 345 SITE 2 AC5 7 HOH A 745 HOH A 820 HOH A1009 SITE 1 AC6 8 GLY A 365 SER A 383 GLY A 384 THR A 385 SITE 2 AC6 8 ARG A 559 HOH A 826 HOH A 896 HOH A1031 SITE 1 AC7 1 ARG A 556 SITE 1 AC8 1 HIS A 563 SITE 1 AC9 1 ARG A 28 CRYST1 105.801 105.801 222.238 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009452 0.005457 0.000000 0.00000 SCALE2 0.000000 0.010914 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004500 0.00000