data_3I5W # _entry.id 3I5W # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3I5W pdb_00003i5w 10.2210/pdb3i5w/pdb RCSB RCSB054003 ? ? WWPDB D_1000054003 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1ZMP 'Crystal structure of human defensin 5' unspecified PDB 3GNY 'Crystal structure of human alpha-defensin 1' unspecified # _pdbx_database_status.entry_id 3I5W _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-07-06 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pazgier, M.' 1 'Lu, W.' 2 # _citation.id primary _citation.title 'Selective arginines are important for the antibacterial activity and host cell interaction of human alpha-defensin 5' _citation.journal_abbrev 'Febs Lett.' _citation.journal_volume 583 _citation.page_first 2507 _citation.page_last 2512 _citation.year 2009 _citation.journal_id_ASTM FEBLAL _citation.country NE _citation.journal_id_ISSN 0014-5793 _citation.journal_id_CSD 0165 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19589339 _citation.pdbx_database_id_DOI 10.1016/j.febslet.2009.06.051 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'de Leeuw, E.' 1 ? primary 'Rajabi, M.' 2 ? primary 'Zou, G.' 3 ? primary 'Pazgier, M.' 4 ? primary 'Lu, W.' 5 ? # _cell.length_a 48.018 _cell.length_b 49.754 _cell.length_c 62.355 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3I5W _cell.pdbx_unique_axis ? _cell.Z_PDB 16 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.entry_id 3I5W _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 23 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn Defensin-5 3575.181 2 ? R13H ? ? 2 non-polymer syn 'CITRATE ANION' 189.100 1 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 4 water nat water 18.015 65 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Defensin, alpha 5' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ATCYCRTGRCATHESLSGVCEISGRLYRLCCR _entity_poly.pdbx_seq_one_letter_code_can ATCYCRTGRCATHESLSGVCEISGRLYRLCCR _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 THR n 1 3 CYS n 1 4 TYR n 1 5 CYS n 1 6 ARG n 1 7 THR n 1 8 GLY n 1 9 ARG n 1 10 CYS n 1 11 ALA n 1 12 THR n 1 13 HIS n 1 14 GLU n 1 15 SER n 1 16 LEU n 1 17 SER n 1 18 GLY n 1 19 VAL n 1 20 CYS n 1 21 GLU n 1 22 ILE n 1 23 SER n 1 24 GLY n 1 25 ARG n 1 26 LEU n 1 27 TYR n 1 28 ARG n 1 29 LEU n 1 30 CYS n 1 31 CYS n 1 32 ARG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DEF5_HUMAN _struct_ref.pdbx_db_accession Q01523 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ATCYCRTGRCATRESLSGVCEISGRLYRLCCR _struct_ref.pdbx_align_begin 63 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3I5W A 1 ? 32 ? Q01523 63 ? 94 ? 1 32 2 1 3I5W B 1 ? 32 ? Q01523 63 ? 94 ? 1 32 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3I5W HIS A 13 ? UNP Q01523 ARG 75 'engineered mutation' 13 1 2 3I5W HIS B 13 ? UNP Q01523 ARG 75 'engineered mutation' 13 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FLC non-polymer . 'CITRATE ANION' ? 'C6 H5 O7 -3' 189.100 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3I5W _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.60 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 52.77 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.temp 273 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '20% PEG 4000, 20% 2-propanol, 0.1M Na citrate buffer, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 273K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2009-06-15 _diffrn_detector.details confocal # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54 _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 3I5W _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 1.630 _reflns.d_resolution_low 38.891 _reflns.number_all 9653 _reflns.number_obs 9433 _reflns.percent_possible_obs 97.7 _reflns.pdbx_Rmerge_I_obs 0.075 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 26.7 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.63 _reflns_shell.d_res_low 1.66 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 81.6 _reflns_shell.Rmerge_I_obs 0.512 _reflns_shell.meanI_over_sigI_obs 3.4 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 6.2 _reflns_shell.number_unique_all 399 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3I5W _refine.ls_d_res_high 1.630 _refine.ls_d_res_low 20.000 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 97.820 _refine.ls_number_reflns_obs 9429 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS, U VALUES: RESIDUAL ONLY' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.177 _refine.ls_R_factor_R_work 0.176 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.194 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.800 _refine.ls_number_reflns_R_free 456 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 28.288 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.020 _refine.aniso_B[2][2] -0.790 _refine.aniso_B[3][3] 0.810 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.967 _refine.correlation_coeff_Fo_to_Fc_free 0.957 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.086 _refine.pdbx_overall_ESU_R_Free 0.082 _refine.overall_SU_ML 0.050 _refine.overall_SU_B 3.092 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB entry 1ZMP' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 66.81 _refine.B_iso_min 18.27 _refine.occupancy_max 1.00 _refine.occupancy_min 0.50 _refine.pdbx_ls_sigma_I 2 _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 488 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 14 _refine_hist.number_atoms_solvent 65 _refine_hist.number_atoms_total 567 _refine_hist.d_res_high 1.630 _refine_hist.d_res_low 20.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 518 0.017 0.021 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 701 1.733 1.995 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 66 6.546 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 20 15.497 17.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 88 11.534 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 10 11.917 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 77 0.119 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 386 0.008 0.020 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 322 1.208 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 515 2.021 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 196 3.038 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 184 5.272 4.500 ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 'X-RAY DIFFRACTION' 1 1 'LOOSE POSITIONAL' A 238 0.620 5.000 1 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 1 1 'LOOSE THERMAL' A 238 3.350 10.000 2 ? ? ? ? ? ? # _refine_ls_shell.d_res_high 1.630 _refine_ls_shell.d_res_low 1.672 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 90.900 _refine_ls_shell.number_reflns_R_work 609 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.263 _refine_ls_shell.R_factor_R_free 0.198 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 30 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 639 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 A 1 2 B # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 1 A ALA 1 . A ARG 32 . A ALA 1 A ARG 32 6 ? 1 2 1 B ALA 1 . B ARG 32 . B ALA 1 B ARG 32 6 ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 3I5W _struct.title 'Crystal structure of human alpha-defensin 5 (mutant R13H)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3I5W _struct_keywords.pdbx_keywords 'ANTIMICROBIAL PROTEIN' _struct_keywords.text ;human alpha-defensin 5, HD5, antimicrobial peptide, Antibiotic, Antimicrobial, Defensin, Disulfide bond, Fungicide, Secreted, ANTIMICROBIAL PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 3 SG ? ? ? 1_555 A CYS 31 SG ? ? A CYS 3 A CYS 31 1_555 ? ? ? ? ? ? ? 2.067 ? ? disulf2 disulf ? ? A CYS 5 SG ? ? ? 1_555 A CYS 20 SG ? ? A CYS 5 A CYS 20 1_555 ? ? ? ? ? ? ? 2.046 ? ? disulf3 disulf ? ? A CYS 10 SG ? ? ? 1_555 A CYS 30 SG ? ? A CYS 10 A CYS 30 1_555 ? ? ? ? ? ? ? 2.016 ? ? disulf4 disulf ? ? B CYS 3 SG ? ? ? 1_555 B CYS 31 SG ? ? B CYS 3 B CYS 31 1_555 ? ? ? ? ? ? ? 2.088 ? ? disulf5 disulf ? ? B CYS 5 SG ? ? ? 1_555 B CYS 20 SG ? ? B CYS 5 B CYS 20 1_555 ? ? ? ? ? ? ? 2.010 ? ? disulf6 disulf ? ? B CYS 10 SG ? ? ? 1_555 B CYS 30 SG ? ? B CYS 10 B CYS 30 1_555 ? ? ? ? ? ? ? 2.040 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 7 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 CYS A 3 ? ARG A 6 ? CYS A 3 ARG A 6 A 2 ARG A 25 ? ARG A 32 ? ARG A 25 ARG A 32 A 3 SER A 15 ? ILE A 22 ? SER A 15 ILE A 22 A 4 SER B 15 ? ILE B 22 ? SER B 15 ILE B 22 A 5 ARG B 25 ? CYS B 31 ? ARG B 25 CYS B 31 A 6 THR B 2 ? ARG B 6 ? THR B 2 ARG B 6 A 7 CYS A 3 ? ARG A 6 ? CYS A 3 ARG A 6 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 4 ? N TYR A 4 O CYS A 30 ? O CYS A 30 A 2 3 O LEU A 29 ? O LEU A 29 N SER A 17 ? N SER A 17 A 3 4 N VAL A 19 ? N VAL A 19 O GLU B 21 ? O GLU B 21 A 4 5 N SER B 17 ? N SER B 17 O LEU B 29 ? O LEU B 29 A 5 6 O ARG B 28 ? O ARG B 28 N ARG B 6 ? N ARG B 6 A 6 7 O CYS B 3 ? O CYS B 3 N CYS A 3 ? N CYS A 3 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id FLC _struct_site.pdbx_auth_seq_id 33 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 14 _struct_site.details 'BINDING SITE FOR RESIDUE FLC A 33' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 14 TYR A 4 ? TYR A 4 . ? 1_555 ? 2 AC1 14 CYS A 5 ? CYS A 5 . ? 1_555 ? 3 AC1 14 ARG A 6 ? ARG A 6 . ? 1_555 ? 4 AC1 14 THR A 7 ? THR A 7 . ? 1_555 ? 5 AC1 14 HOH E . ? HOH A 34 . ? 1_555 ? 6 AC1 14 HOH E . ? HOH A 46 . ? 1_555 ? 7 AC1 14 HOH E . ? HOH A 50 . ? 1_555 ? 8 AC1 14 HOH E . ? HOH A 60 . ? 1_555 ? 9 AC1 14 HOH E . ? HOH A 62 . ? 1_555 ? 10 AC1 14 HOH E . ? HOH A 64 . ? 1_555 ? 11 AC1 14 ALA B 1 ? ALA B 1 . ? 1_555 ? 12 AC1 14 ARG B 28 ? ARG B 28 . ? 8_545 ? 13 AC1 14 HOH F . ? HOH B 50 . ? 8_545 ? 14 AC1 14 HOH F . ? HOH B 56 . ? 8_545 ? # _atom_sites.entry_id 3I5W _atom_sites.fract_transf_matrix[1][1] 0.020826 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020099 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016037 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 THR 2 2 2 THR THR A . n A 1 3 CYS 3 3 3 CYS CYS A . n A 1 4 TYR 4 4 4 TYR TYR A . n A 1 5 CYS 5 5 5 CYS CYS A . n A 1 6 ARG 6 6 6 ARG ARG A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 ARG 9 9 9 ARG ARG A . n A 1 10 CYS 10 10 10 CYS CYS A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 HIS 13 13 13 HIS HIS A . n A 1 14 GLU 14 14 14 GLU GLU A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 VAL 19 19 19 VAL VAL A . n A 1 20 CYS 20 20 20 CYS CYS A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 ILE 22 22 22 ILE ILE A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 ARG 25 25 25 ARG ARG A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 TYR 27 27 27 TYR TYR A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 CYS 30 30 30 CYS CYS A . n A 1 31 CYS 31 31 31 CYS CYS A . n A 1 32 ARG 32 32 32 ARG ARG A . n B 1 1 ALA 1 1 1 ALA ALA B . n B 1 2 THR 2 2 2 THR THR B . n B 1 3 CYS 3 3 3 CYS CYS B . n B 1 4 TYR 4 4 4 TYR TYR B . n B 1 5 CYS 5 5 5 CYS CYS B . n B 1 6 ARG 6 6 6 ARG ARG B . n B 1 7 THR 7 7 7 THR THR B . n B 1 8 GLY 8 8 8 GLY GLY B . n B 1 9 ARG 9 9 9 ARG ARG B . n B 1 10 CYS 10 10 10 CYS CYS B . n B 1 11 ALA 11 11 11 ALA ALA B . n B 1 12 THR 12 12 12 THR THR B . n B 1 13 HIS 13 13 13 HIS HIS B . n B 1 14 GLU 14 14 14 GLU GLU B . n B 1 15 SER 15 15 15 SER SER B . n B 1 16 LEU 16 16 16 LEU LEU B . n B 1 17 SER 17 17 17 SER SER B . n B 1 18 GLY 18 18 18 GLY GLY B . n B 1 19 VAL 19 19 19 VAL VAL B . n B 1 20 CYS 20 20 20 CYS CYS B . n B 1 21 GLU 21 21 21 GLU GLU B . n B 1 22 ILE 22 22 22 ILE ILE B . n B 1 23 SER 23 23 23 SER SER B . n B 1 24 GLY 24 24 24 GLY GLY B . n B 1 25 ARG 25 25 25 ARG ARG B . n B 1 26 LEU 26 26 26 LEU LEU B . n B 1 27 TYR 27 27 27 TYR TYR B . n B 1 28 ARG 28 28 28 ARG ARG B . n B 1 29 LEU 29 29 29 LEU LEU B . n B 1 30 CYS 30 30 30 CYS CYS B . n B 1 31 CYS 31 31 31 CYS CYS B . n B 1 32 ARG 32 32 32 ARG ARG B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FLC 1 33 1 FLC FLC A . D 3 CL 1 33 1 CL CL B . E 4 HOH 1 34 34 HOH HOH A . E 4 HOH 2 35 4 HOH HOH A . E 4 HOH 3 36 36 HOH HOH A . E 4 HOH 4 37 37 HOH HOH A . E 4 HOH 5 38 5 HOH HOH A . E 4 HOH 6 39 6 HOH HOH A . E 4 HOH 7 40 7 HOH HOH A . E 4 HOH 8 41 8 HOH HOH A . E 4 HOH 9 42 42 HOH HOH A . E 4 HOH 10 43 43 HOH HOH A . E 4 HOH 11 44 13 HOH HOH A . E 4 HOH 12 45 45 HOH HOH A . E 4 HOH 13 46 17 HOH HOH A . E 4 HOH 14 47 47 HOH HOH A . E 4 HOH 15 48 23 HOH HOH A . E 4 HOH 16 49 49 HOH HOH A . E 4 HOH 17 50 50 HOH HOH A . E 4 HOH 18 51 51 HOH HOH A . E 4 HOH 19 52 52 HOH HOH A . E 4 HOH 20 53 53 HOH HOH A . E 4 HOH 21 54 54 HOH HOH A . E 4 HOH 22 55 55 HOH HOH A . E 4 HOH 23 56 26 HOH HOH A . E 4 HOH 24 57 57 HOH HOH A . E 4 HOH 25 58 58 HOH HOH A . E 4 HOH 26 59 59 HOH HOH A . E 4 HOH 27 60 60 HOH HOH A . E 4 HOH 28 61 28 HOH HOH A . E 4 HOH 29 62 62 HOH HOH A . E 4 HOH 30 63 63 HOH HOH A . E 4 HOH 31 64 64 HOH HOH A . E 4 HOH 32 65 65 HOH HOH A . E 4 HOH 33 66 29 HOH HOH A . F 4 HOH 1 34 1 HOH HOH B . F 4 HOH 2 35 35 HOH HOH B . F 4 HOH 3 36 2 HOH HOH B . F 4 HOH 4 37 3 HOH HOH B . F 4 HOH 5 38 38 HOH HOH B . F 4 HOH 6 39 39 HOH HOH B . F 4 HOH 7 40 40 HOH HOH B . F 4 HOH 8 41 41 HOH HOH B . F 4 HOH 9 42 9 HOH HOH B . F 4 HOH 10 43 10 HOH HOH B . F 4 HOH 11 44 44 HOH HOH B . F 4 HOH 12 45 11 HOH HOH B . F 4 HOH 13 46 46 HOH HOH B . F 4 HOH 14 47 12 HOH HOH B . F 4 HOH 15 48 48 HOH HOH B . F 4 HOH 16 49 14 HOH HOH B . F 4 HOH 17 50 15 HOH HOH B . F 4 HOH 18 51 16 HOH HOH B . F 4 HOH 19 52 18 HOH HOH B . F 4 HOH 20 53 19 HOH HOH B . F 4 HOH 21 54 20 HOH HOH B . F 4 HOH 22 55 21 HOH HOH B . F 4 HOH 23 56 56 HOH HOH B . F 4 HOH 24 57 22 HOH HOH B . F 4 HOH 25 58 24 HOH HOH B . F 4 HOH 26 59 25 HOH HOH B . F 4 HOH 27 60 27 HOH HOH B . F 4 HOH 28 61 61 HOH HOH B . F 4 HOH 29 62 30 HOH HOH B . F 4 HOH 30 63 31 HOH HOH B . F 4 HOH 31 64 32 HOH HOH B . F 4 HOH 32 65 33 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 680 ? 1 MORE -5 ? 1 'SSA (A^2)' 4490 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id B _pdbx_struct_special_symmetry.auth_comp_id CL _pdbx_struct_special_symmetry.auth_seq_id 33 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id CL _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-07-28 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-04-11 4 'Structure model' 1 3 2021-10-13 5 'Structure model' 1 4 2021-10-27 6 'Structure model' 1 5 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Derived calculations' 3 2 'Structure model' 'Refinement description' 4 2 'Structure model' 'Version format compliance' 5 3 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Derived calculations' 8 5 'Structure model' 'Source and taxonomy' 9 6 'Structure model' 'Data collection' 10 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' struct_ref_seq_dif 3 4 'Structure model' struct_site 4 5 'Structure model' pdbx_entity_src_syn 5 6 'Structure model' chem_comp_atom 6 6 'Structure model' chem_comp_bond 7 6 'Structure model' pdbx_initial_refinement_model 8 6 'Structure model' struct_ncs_dom_lim # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' 7 5 'Structure model' '_pdbx_entity_src_syn.details' 8 5 'Structure model' '_pdbx_entity_src_syn.ncbi_taxonomy_id' 9 5 'Structure model' '_pdbx_entity_src_syn.organism_common_name' 10 5 'Structure model' '_pdbx_entity_src_syn.organism_scientific' 11 6 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 12 6 'Structure model' '_struct_ncs_dom_lim.beg_label_asym_id' 13 6 'Structure model' '_struct_ncs_dom_lim.beg_label_comp_id' 14 6 'Structure model' '_struct_ncs_dom_lim.beg_label_seq_id' 15 6 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' 16 6 'Structure model' '_struct_ncs_dom_lim.end_label_asym_id' 17 6 'Structure model' '_struct_ncs_dom_lim.end_label_comp_id' 18 6 'Structure model' '_struct_ncs_dom_lim.end_label_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 2.1180 -7.7780 11.0245 0.0456 0.0101 0.0252 0.0132 -0.0119 -0.0002 3.8502 2.2494 2.8170 0.0105 0.2900 0.2684 0.0475 0.0528 -0.1003 0.0320 -0.1955 -0.0662 0.0266 0.2191 0.1177 'X-RAY DIFFRACTION' 2 ? refined -10.1341 -13.3156 9.7572 0.0947 0.0801 0.0823 -0.0357 0.0029 0.0001 1.4502 3.9555 2.5411 1.8323 -1.8956 -2.1640 -0.1429 0.0958 0.0471 0.1125 -0.0472 -0.0158 -0.2778 0.1168 -0.1278 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 1 A 32 ? . . . . ? 'X-RAY DIFFRACTION' 2 1 A 33 A 33 ? . . . . ? 'X-RAY DIFFRACTION' 3 1 A 34 A 66 ? . . . . ? 'X-RAY DIFFRACTION' 4 2 B 1 B 32 ? . . . . ? 'X-RAY DIFFRACTION' 5 2 B 33 B 33 ? . . . . ? 'X-RAY DIFFRACTION' 6 2 B 34 B 65 ? . . . . ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 REFMAC 5.5.0070 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 2 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 HKL-2000 . ? ? ? ? 'data collection' ? ? ? 4 DENZO . ? ? ? ? 'data reduction' ? ? ? 5 SCALEPACK . ? ? ? ? 'data scaling' ? ? ? 6 PHASER . ? ? ? ? phasing ? ? ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 CL CL CL N N 41 CYS N N N N 42 CYS CA C N R 43 CYS C C N N 44 CYS O O N N 45 CYS CB C N N 46 CYS SG S N N 47 CYS OXT O N N 48 CYS H H N N 49 CYS H2 H N N 50 CYS HA H N N 51 CYS HB2 H N N 52 CYS HB3 H N N 53 CYS HG H N N 54 CYS HXT H N N 55 FLC CAC C N N 56 FLC CA C N N 57 FLC CB C N N 58 FLC CBC C N N 59 FLC CG C N N 60 FLC CGC C N N 61 FLC OA1 O N N 62 FLC OA2 O N N 63 FLC OB1 O N N 64 FLC OB2 O N N 65 FLC OG1 O N N 66 FLC OG2 O N N 67 FLC OHB O N N 68 FLC HA1 H N N 69 FLC HA2 H N N 70 FLC HG1 H N N 71 FLC HG2 H N N 72 FLC HOB H N N 73 GLU N N N N 74 GLU CA C N S 75 GLU C C N N 76 GLU O O N N 77 GLU CB C N N 78 GLU CG C N N 79 GLU CD C N N 80 GLU OE1 O N N 81 GLU OE2 O N N 82 GLU OXT O N N 83 GLU H H N N 84 GLU H2 H N N 85 GLU HA H N N 86 GLU HB2 H N N 87 GLU HB3 H N N 88 GLU HG2 H N N 89 GLU HG3 H N N 90 GLU HE2 H N N 91 GLU HXT H N N 92 GLY N N N N 93 GLY CA C N N 94 GLY C C N N 95 GLY O O N N 96 GLY OXT O N N 97 GLY H H N N 98 GLY H2 H N N 99 GLY HA2 H N N 100 GLY HA3 H N N 101 GLY HXT H N N 102 HIS N N N N 103 HIS CA C N S 104 HIS C C N N 105 HIS O O N N 106 HIS CB C N N 107 HIS CG C Y N 108 HIS ND1 N Y N 109 HIS CD2 C Y N 110 HIS CE1 C Y N 111 HIS NE2 N Y N 112 HIS OXT O N N 113 HIS H H N N 114 HIS H2 H N N 115 HIS HA H N N 116 HIS HB2 H N N 117 HIS HB3 H N N 118 HIS HD1 H N N 119 HIS HD2 H N N 120 HIS HE1 H N N 121 HIS HE2 H N N 122 HIS HXT H N N 123 HOH O O N N 124 HOH H1 H N N 125 HOH H2 H N N 126 ILE N N N N 127 ILE CA C N S 128 ILE C C N N 129 ILE O O N N 130 ILE CB C N S 131 ILE CG1 C N N 132 ILE CG2 C N N 133 ILE CD1 C N N 134 ILE OXT O N N 135 ILE H H N N 136 ILE H2 H N N 137 ILE HA H N N 138 ILE HB H N N 139 ILE HG12 H N N 140 ILE HG13 H N N 141 ILE HG21 H N N 142 ILE HG22 H N N 143 ILE HG23 H N N 144 ILE HD11 H N N 145 ILE HD12 H N N 146 ILE HD13 H N N 147 ILE HXT H N N 148 LEU N N N N 149 LEU CA C N S 150 LEU C C N N 151 LEU O O N N 152 LEU CB C N N 153 LEU CG C N N 154 LEU CD1 C N N 155 LEU CD2 C N N 156 LEU OXT O N N 157 LEU H H N N 158 LEU H2 H N N 159 LEU HA H N N 160 LEU HB2 H N N 161 LEU HB3 H N N 162 LEU HG H N N 163 LEU HD11 H N N 164 LEU HD12 H N N 165 LEU HD13 H N N 166 LEU HD21 H N N 167 LEU HD22 H N N 168 LEU HD23 H N N 169 LEU HXT H N N 170 SER N N N N 171 SER CA C N S 172 SER C C N N 173 SER O O N N 174 SER CB C N N 175 SER OG O N N 176 SER OXT O N N 177 SER H H N N 178 SER H2 H N N 179 SER HA H N N 180 SER HB2 H N N 181 SER HB3 H N N 182 SER HG H N N 183 SER HXT H N N 184 THR N N N N 185 THR CA C N S 186 THR C C N N 187 THR O O N N 188 THR CB C N R 189 THR OG1 O N N 190 THR CG2 C N N 191 THR OXT O N N 192 THR H H N N 193 THR H2 H N N 194 THR HA H N N 195 THR HB H N N 196 THR HG1 H N N 197 THR HG21 H N N 198 THR HG22 H N N 199 THR HG23 H N N 200 THR HXT H N N 201 TYR N N N N 202 TYR CA C N S 203 TYR C C N N 204 TYR O O N N 205 TYR CB C N N 206 TYR CG C Y N 207 TYR CD1 C Y N 208 TYR CD2 C Y N 209 TYR CE1 C Y N 210 TYR CE2 C Y N 211 TYR CZ C Y N 212 TYR OH O N N 213 TYR OXT O N N 214 TYR H H N N 215 TYR H2 H N N 216 TYR HA H N N 217 TYR HB2 H N N 218 TYR HB3 H N N 219 TYR HD1 H N N 220 TYR HD2 H N N 221 TYR HE1 H N N 222 TYR HE2 H N N 223 TYR HH H N N 224 TYR HXT H N N 225 VAL N N N N 226 VAL CA C N S 227 VAL C C N N 228 VAL O O N N 229 VAL CB C N N 230 VAL CG1 C N N 231 VAL CG2 C N N 232 VAL OXT O N N 233 VAL H H N N 234 VAL H2 H N N 235 VAL HA H N N 236 VAL HB H N N 237 VAL HG11 H N N 238 VAL HG12 H N N 239 VAL HG13 H N N 240 VAL HG21 H N N 241 VAL HG22 H N N 242 VAL HG23 H N N 243 VAL HXT H N N 244 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 CYS N CA sing N N 39 CYS N H sing N N 40 CYS N H2 sing N N 41 CYS CA C sing N N 42 CYS CA CB sing N N 43 CYS CA HA sing N N 44 CYS C O doub N N 45 CYS C OXT sing N N 46 CYS CB SG sing N N 47 CYS CB HB2 sing N N 48 CYS CB HB3 sing N N 49 CYS SG HG sing N N 50 CYS OXT HXT sing N N 51 FLC CAC CA sing N N 52 FLC CAC OA1 doub N N 53 FLC CAC OA2 sing N N 54 FLC CA CB sing N N 55 FLC CA HA1 sing N N 56 FLC CA HA2 sing N N 57 FLC CB CBC sing N N 58 FLC CB CG sing N N 59 FLC CB OHB sing N N 60 FLC CBC OB1 doub N N 61 FLC CBC OB2 sing N N 62 FLC CG CGC sing N N 63 FLC CG HG1 sing N N 64 FLC CG HG2 sing N N 65 FLC CGC OG1 doub N N 66 FLC CGC OG2 sing N N 67 FLC OHB HOB sing N N 68 GLU N CA sing N N 69 GLU N H sing N N 70 GLU N H2 sing N N 71 GLU CA C sing N N 72 GLU CA CB sing N N 73 GLU CA HA sing N N 74 GLU C O doub N N 75 GLU C OXT sing N N 76 GLU CB CG sing N N 77 GLU CB HB2 sing N N 78 GLU CB HB3 sing N N 79 GLU CG CD sing N N 80 GLU CG HG2 sing N N 81 GLU CG HG3 sing N N 82 GLU CD OE1 doub N N 83 GLU CD OE2 sing N N 84 GLU OE2 HE2 sing N N 85 GLU OXT HXT sing N N 86 GLY N CA sing N N 87 GLY N H sing N N 88 GLY N H2 sing N N 89 GLY CA C sing N N 90 GLY CA HA2 sing N N 91 GLY CA HA3 sing N N 92 GLY C O doub N N 93 GLY C OXT sing N N 94 GLY OXT HXT sing N N 95 HIS N CA sing N N 96 HIS N H sing N N 97 HIS N H2 sing N N 98 HIS CA C sing N N 99 HIS CA CB sing N N 100 HIS CA HA sing N N 101 HIS C O doub N N 102 HIS C OXT sing N N 103 HIS CB CG sing N N 104 HIS CB HB2 sing N N 105 HIS CB HB3 sing N N 106 HIS CG ND1 sing Y N 107 HIS CG CD2 doub Y N 108 HIS ND1 CE1 doub Y N 109 HIS ND1 HD1 sing N N 110 HIS CD2 NE2 sing Y N 111 HIS CD2 HD2 sing N N 112 HIS CE1 NE2 sing Y N 113 HIS CE1 HE1 sing N N 114 HIS NE2 HE2 sing N N 115 HIS OXT HXT sing N N 116 HOH O H1 sing N N 117 HOH O H2 sing N N 118 ILE N CA sing N N 119 ILE N H sing N N 120 ILE N H2 sing N N 121 ILE CA C sing N N 122 ILE CA CB sing N N 123 ILE CA HA sing N N 124 ILE C O doub N N 125 ILE C OXT sing N N 126 ILE CB CG1 sing N N 127 ILE CB CG2 sing N N 128 ILE CB HB sing N N 129 ILE CG1 CD1 sing N N 130 ILE CG1 HG12 sing N N 131 ILE CG1 HG13 sing N N 132 ILE CG2 HG21 sing N N 133 ILE CG2 HG22 sing N N 134 ILE CG2 HG23 sing N N 135 ILE CD1 HD11 sing N N 136 ILE CD1 HD12 sing N N 137 ILE CD1 HD13 sing N N 138 ILE OXT HXT sing N N 139 LEU N CA sing N N 140 LEU N H sing N N 141 LEU N H2 sing N N 142 LEU CA C sing N N 143 LEU CA CB sing N N 144 LEU CA HA sing N N 145 LEU C O doub N N 146 LEU C OXT sing N N 147 LEU CB CG sing N N 148 LEU CB HB2 sing N N 149 LEU CB HB3 sing N N 150 LEU CG CD1 sing N N 151 LEU CG CD2 sing N N 152 LEU CG HG sing N N 153 LEU CD1 HD11 sing N N 154 LEU CD1 HD12 sing N N 155 LEU CD1 HD13 sing N N 156 LEU CD2 HD21 sing N N 157 LEU CD2 HD22 sing N N 158 LEU CD2 HD23 sing N N 159 LEU OXT HXT sing N N 160 SER N CA sing N N 161 SER N H sing N N 162 SER N H2 sing N N 163 SER CA C sing N N 164 SER CA CB sing N N 165 SER CA HA sing N N 166 SER C O doub N N 167 SER C OXT sing N N 168 SER CB OG sing N N 169 SER CB HB2 sing N N 170 SER CB HB3 sing N N 171 SER OG HG sing N N 172 SER OXT HXT sing N N 173 THR N CA sing N N 174 THR N H sing N N 175 THR N H2 sing N N 176 THR CA C sing N N 177 THR CA CB sing N N 178 THR CA HA sing N N 179 THR C O doub N N 180 THR C OXT sing N N 181 THR CB OG1 sing N N 182 THR CB CG2 sing N N 183 THR CB HB sing N N 184 THR OG1 HG1 sing N N 185 THR CG2 HG21 sing N N 186 THR CG2 HG22 sing N N 187 THR CG2 HG23 sing N N 188 THR OXT HXT sing N N 189 TYR N CA sing N N 190 TYR N H sing N N 191 TYR N H2 sing N N 192 TYR CA C sing N N 193 TYR CA CB sing N N 194 TYR CA HA sing N N 195 TYR C O doub N N 196 TYR C OXT sing N N 197 TYR CB CG sing N N 198 TYR CB HB2 sing N N 199 TYR CB HB3 sing N N 200 TYR CG CD1 doub Y N 201 TYR CG CD2 sing Y N 202 TYR CD1 CE1 sing Y N 203 TYR CD1 HD1 sing N N 204 TYR CD2 CE2 doub Y N 205 TYR CD2 HD2 sing N N 206 TYR CE1 CZ doub Y N 207 TYR CE1 HE1 sing N N 208 TYR CE2 CZ sing Y N 209 TYR CE2 HE2 sing N N 210 TYR CZ OH sing N N 211 TYR OH HH sing N N 212 TYR OXT HXT sing N N 213 VAL N CA sing N N 214 VAL N H sing N N 215 VAL N H2 sing N N 216 VAL CA C sing N N 217 VAL CA CB sing N N 218 VAL CA HA sing N N 219 VAL C O doub N N 220 VAL C OXT sing N N 221 VAL CB CG1 sing N N 222 VAL CB CG2 sing N N 223 VAL CB HB sing N N 224 VAL CG1 HG11 sing N N 225 VAL CG1 HG12 sing N N 226 VAL CG1 HG13 sing N N 227 VAL CG2 HG21 sing N N 228 VAL CG2 HG22 sing N N 229 VAL CG2 HG23 sing N N 230 VAL OXT HXT sing N N 231 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CITRATE ANION' FLC 3 'CHLORIDE ION' CL 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1ZMP _pdbx_initial_refinement_model.details 'PDB entry 1ZMP' #