HEADER HYDROLASE 09-JUL-09 3I80 TITLE PROTEIN TYROSINE PHOSPHATASE 1B - TRANSITION STATE ANALOG FOR THE TITLE 2 SECOND CATALYTIC STEP COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 1-321; COMPND 5 SYNONYM: PROTEIN-TYROSINE PHOSPHATASE 1B, PTP-1B; COMPND 6 EC: 3.1.3.48; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PTP1B, PTPN1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-19B KEYWDS HYDROLASE, P-LOOP, WPD-LOOP, PROTEIN PHOSPHATASE, VANADATE, KEYWDS 2 ACETYLATION, ENDOPLASMIC RETICULUM, MEMBRANE, OXIDATION, KEYWDS 3 PHOSPHOPROTEIN, POLYMORPHISM EXPDTA X-RAY DIFFRACTION AUTHOR T.A.S.BRANDAO,S.J.JOHNSON,A.C.HENGGE REVDAT 3 06-SEP-23 3I80 1 REMARK REVDAT 2 09-JUN-10 3I80 1 JRNL REVDAT 1 16-MAR-10 3I80 0 JRNL AUTH T.A.BRANDAO,A.C.HENGGE,S.J.JOHNSON JRNL TITL INSIGHTS INTO THE REACTION OF PROTEIN-TYROSINE PHOSPHATASE JRNL TITL 2 1B: CRYSTAL STRUCTURES FOR TRANSITION STATE ANALOGS OF BOTH JRNL TITL 3 CATALYTIC STEPS. JRNL REF J.BIOL.CHEM. V. 285 15874 2010 JRNL REFN ISSN 0021-9258 JRNL PMID 20236928 JRNL DOI 10.1074/JBC.M109.066951 REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.71 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.900 REMARK 3 COMPLETENESS FOR RANGE (%) : 52.8 REMARK 3 NUMBER OF REFLECTIONS : 22441 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.120 REMARK 3 FREE R VALUE TEST SET COUNT : 1149 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.7180 - 4.4970 0.55 2813 131 0.1830 0.2070 REMARK 3 2 4.4970 - 3.5710 0.53 2686 147 0.1340 0.1670 REMARK 3 3 3.5710 - 3.1200 0.53 2657 157 0.1750 0.2230 REMARK 3 4 3.1200 - 2.8350 0.52 2614 142 0.2120 0.2560 REMARK 3 5 2.8350 - 2.6320 0.52 2677 125 0.2200 0.2890 REMARK 3 6 2.6320 - 2.4770 0.52 2627 137 0.2250 0.2880 REMARK 3 7 2.4770 - 2.3520 0.52 2612 163 0.2510 0.2640 REMARK 3 8 2.3520 - 2.2500 0.52 2606 147 0.2900 0.3520 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.37 REMARK 3 B_SOL : 64.42 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 44.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.38 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.66900 REMARK 3 B22 (A**2) : -0.66900 REMARK 3 B33 (A**2) : 1.33900 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2522 REMARK 3 ANGLE : 0.939 3397 REMARK 3 CHIRALITY : 0.067 358 REMARK 3 PLANARITY : 0.004 436 REMARK 3 DIHEDRAL : 17.173 952 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 2:16) REMARK 3 ORIGIN FOR THE GROUP (A): 25.1276 -6.9295 -11.4432 REMARK 3 T TENSOR REMARK 3 T11: 0.5274 T22: 0.3974 REMARK 3 T33: 0.5560 T12: 0.1628 REMARK 3 T13: 0.0058 T23: -0.0364 REMARK 3 L TENSOR REMARK 3 L11: 0.2349 L22: -0.2526 REMARK 3 L33: 0.7558 L12: 0.1093 REMARK 3 L13: -0.0234 L23: -0.1601 REMARK 3 S TENSOR REMARK 3 S11: 0.1909 S12: -0.0037 S13: 0.1786 REMARK 3 S21: 0.1318 S22: -0.2408 S23: 0.3334 REMARK 3 S31: -0.7041 S32: -0.0309 S33: 0.0396 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 17:29) REMARK 3 ORIGIN FOR THE GROUP (A): 19.2224 -22.1096 -6.3151 REMARK 3 T TENSOR REMARK 3 T11: 0.4305 T22: 0.6007 REMARK 3 T33: 0.5660 T12: 0.0834 REMARK 3 T13: 0.0924 T23: -0.0421 REMARK 3 L TENSOR REMARK 3 L11: -0.2457 L22: 2.6210 REMARK 3 L33: 0.3885 L12: -0.2889 REMARK 3 L13: -0.5868 L23: -0.2988 REMARK 3 S TENSOR REMARK 3 S11: 0.0483 S12: -0.1692 S13: -0.2221 REMARK 3 S21: 0.1867 S22: -0.4079 S23: 0.7954 REMARK 3 S31: -0.0050 S32: -0.5035 S33: 0.3378 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 30:60) REMARK 3 ORIGIN FOR THE GROUP (A): 26.7305 -42.5679 -8.0040 REMARK 3 T TENSOR REMARK 3 T11: 0.1983 T22: 0.3878 REMARK 3 T33: 0.3567 T12: -0.0665 REMARK 3 T13: -0.0030 T23: 0.0495 REMARK 3 L TENSOR REMARK 3 L11: 0.0207 L22: 0.4098 REMARK 3 L33: 0.0774 L12: 0.0484 REMARK 3 L13: -0.0838 L23: -0.0928 REMARK 3 S TENSOR REMARK 3 S11: 0.0671 S12: -0.1220 S13: -0.3263 REMARK 3 S21: 0.0683 S22: 0.0350 S23: 0.1964 REMARK 3 S31: 0.0631 S32: -0.4486 S33: -0.1103 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 61:81) REMARK 3 ORIGIN FOR THE GROUP (A): 29.2915 -38.1389 -19.2086 REMARK 3 T TENSOR REMARK 3 T11: 0.2759 T22: 0.3343 REMARK 3 T33: 0.2884 T12: -0.0324 REMARK 3 T13: -0.0135 T23: 0.0117 REMARK 3 L TENSOR REMARK 3 L11: 0.7789 L22: 1.0644 REMARK 3 L33: 1.5685 L12: 0.2584 REMARK 3 L13: 1.1533 L23: -0.6162 REMARK 3 S TENSOR REMARK 3 S11: 0.0089 S12: 0.0947 S13: -0.2196 REMARK 3 S21: -0.2868 S22: 0.1533 S23: 0.1520 REMARK 3 S31: 0.3299 S32: -0.3832 S33: -0.1132 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 82:127) REMARK 3 ORIGIN FOR THE GROUP (A): 42.0129 -38.0890 -11.2922 REMARK 3 T TENSOR REMARK 3 T11: 0.2168 T22: 0.3426 REMARK 3 T33: 0.2620 T12: -0.0120 REMARK 3 T13: -0.0082 T23: -0.0136 REMARK 3 L TENSOR REMARK 3 L11: 0.4160 L22: -0.0160 REMARK 3 L33: 1.5341 L12: 0.1035 REMARK 3 L13: 0.1938 L23: -0.5147 REMARK 3 S TENSOR REMARK 3 S11: 0.0214 S12: -0.1528 S13: -0.2271 REMARK 3 S21: -0.0047 S22: 0.0199 S23: -0.0484 REMARK 3 S31: -0.1117 S32: 0.0133 S33: -0.0380 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 128:147) REMARK 3 ORIGIN FOR THE GROUP (A): 52.4409 -44.8889 -15.4805 REMARK 3 T TENSOR REMARK 3 T11: 0.2079 T22: 0.4055 REMARK 3 T33: 0.3243 T12: 0.0702 REMARK 3 T13: 0.0379 T23: 0.0290 REMARK 3 L TENSOR REMARK 3 L11: 0.7168 L22: 1.9425 REMARK 3 L33: 3.2758 L12: -1.9428 REMARK 3 L13: 0.1628 L23: -0.8580 REMARK 3 S TENSOR REMARK 3 S11: -0.0371 S12: -0.1132 S13: 0.4271 REMARK 3 S21: 0.0020 S22: -0.0487 S23: 0.5087 REMARK 3 S31: 0.4398 S32: 0.7692 S33: 0.0708 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 148:202) REMARK 3 ORIGIN FOR THE GROUP (A): 45.9846 -29.3333 -17.5036 REMARK 3 T TENSOR REMARK 3 T11: 0.2466 T22: 0.3713 REMARK 3 T33: 0.2946 T12: -0.0439 REMARK 3 T13: 0.0064 T23: -0.0065 REMARK 3 L TENSOR REMARK 3 L11: -0.1971 L22: 0.8917 REMARK 3 L33: 0.8096 L12: -0.0797 REMARK 3 L13: 0.3549 L23: -0.8489 REMARK 3 S TENSOR REMARK 3 S11: 0.1096 S12: -0.0026 S13: 0.0178 REMARK 3 S21: 0.0268 S22: -0.0983 S23: -0.1225 REMARK 3 S31: -0.1775 S32: 0.1421 S33: -0.0005 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 203:234) REMARK 3 ORIGIN FOR THE GROUP (A): 35.0571 -27.9198 -18.8289 REMARK 3 T TENSOR REMARK 3 T11: 0.2903 T22: 0.3575 REMARK 3 T33: 0.3239 T12: -0.0166 REMARK 3 T13: -0.0194 T23: -0.0072 REMARK 3 L TENSOR REMARK 3 L11: -0.1671 L22: 0.0978 REMARK 3 L33: 0.1068 L12: -0.1802 REMARK 3 L13: 0.3735 L23: 0.1221 REMARK 3 S TENSOR REMARK 3 S11: 0.1157 S12: -0.0362 S13: -0.0599 REMARK 3 S21: -0.0516 S22: 0.0954 S23: 0.2427 REMARK 3 S31: -0.0451 S32: 0.0923 S33: -0.2135 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN A AND RESID 235:248) REMARK 3 ORIGIN FOR THE GROUP (A): 25.5949 -15.4221 -25.2220 REMARK 3 T TENSOR REMARK 3 T11: 0.4367 T22: 0.4742 REMARK 3 T33: 0.3515 T12: 0.0631 REMARK 3 T13: -0.0252 T23: 0.0536 REMARK 3 L TENSOR REMARK 3 L11: -0.0935 L22: 1.6099 REMARK 3 L33: 0.1096 L12: 0.2086 REMARK 3 L13: 0.9435 L23: 0.3906 REMARK 3 S TENSOR REMARK 3 S11: 0.2341 S12: 0.0031 S13: -0.0295 REMARK 3 S21: -0.2162 S22: 0.2337 S23: 0.3162 REMARK 3 S31: -0.0912 S32: -0.1803 S33: -0.4748 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN A AND RESID 249:299) REMARK 3 ORIGIN FOR THE GROUP (A): 36.0390 -17.2693 -16.5829 REMARK 3 T TENSOR REMARK 3 T11: 0.3365 T22: 0.3352 REMARK 3 T33: 0.2792 T12: -0.0511 REMARK 3 T13: 0.0219 T23: -0.0304 REMARK 3 L TENSOR REMARK 3 L11: 1.1938 L22: 1.1818 REMARK 3 L33: 0.9506 L12: 0.1973 REMARK 3 L13: 0.0960 L23: -0.5527 REMARK 3 S TENSOR REMARK 3 S11: -0.1779 S12: -0.0333 S13: 0.0097 REMARK 3 S21: -0.0466 S22: 0.0585 S23: -0.0850 REMARK 3 S31: -0.3069 S32: 0.0732 S33: 0.1227 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3I80 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-JUL-09. REMARK 100 THE DEPOSITION ID IS D_1000054079. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-SEP-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : OSMIC BLUE OPTICS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK REMARK 200 DATA SCALING SOFTWARE : D*TREK 9.4SSI REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22453 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 38.040 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 4.010 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.04 REMARK 200 R MERGE FOR SHELL (I) : 0.47300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 1.3.3 REMARK 200 STARTING MODEL: PDB ENTRY 1SUG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: DROP: 2 UL OF PROTEIN SOLUTION, 0.5 UL REMARK 280 SUCROSE 30% (W/V) AND 3 UL OF PRECIPITANT SOLUTION (0.1 M HEPES REMARK 280 PH 7.5, 0.2 M MAGNESIUM ACETATE AND 18-20% POLYETHYLENE GLYCOL REMARK 280 8000). WELL: 500 UL OF PRECIPITANT SOLUTION. THE PROTEIN REMARK 280 SOLUTION WAS PREPARED AS FOLLOWS: 9 UL OF 50 MM OF NA3VO4 AND 1 REMARK 280 UL OF 50 MM OF DADEYL PEPTIDE (AT PH 8.5-9.0) WERE MIXED AND REMARK 280 ALLOWED TO REACT FOR 1-1.5 HOUR; THEN, 50 UL OF NATIVE PTP1B (12 REMARK 280 MG/ML IN 10 MM TRIS PH 7.5, 25 MM NACL, 0.2 MM EDTA AND 3 MM DTT) REMARK 280 WAS ADDED AND THE SOLUTION USED IMMEDIATELY FOR REMARK 280 CRYSTALLIZATION. VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 34.59667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 69.19333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 69.19333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 34.59667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 300 REMARK 465 PRO A 301 REMARK 465 PRO A 302 REMARK 465 PRO A 303 REMARK 465 GLU A 304 REMARK 465 HIS A 305 REMARK 465 ILE A 306 REMARK 465 PRO A 307 REMARK 465 PRO A 308 REMARK 465 PRO A 309 REMARK 465 PRO A 310 REMARK 465 ARG A 311 REMARK 465 PRO A 312 REMARK 465 PRO A 313 REMARK 465 LYS A 314 REMARK 465 ARG A 315 REMARK 465 ILE A 316 REMARK 465 LEU A 317 REMARK 465 GLU A 318 REMARK 465 PRO A 319 REMARK 465 HIS A 320 REMARK 465 ASN A 321 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 63 -74.40 -53.46 REMARK 500 LYS A 131 74.18 -119.18 REMARK 500 CYS A 215 -129.27 -125.54 REMARK 500 ILE A 261 109.76 71.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE VO4 A 322 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TRS A 323 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 324 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 325 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 326 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2CM2 RELATED DB: PDB REMARK 900 PROTEIN TYROSINE PHOSPHATASE 1B APO FORM REMARK 900 RELATED ID: 1PTU RELATED DB: PDB REMARK 900 PROTEIN TYROSINE PHOSPHATASE 1B COMPLEXED WITH PHOSPHOTYROSINE- REMARK 900 CONTAINING HEXA-PEPTIDE (DADEPYL-NH2) REMARK 900 RELATED ID: 1A5Y RELATED DB: PDB REMARK 900 PROTEIN TYROSINE PHOSPHATASE 1B CYSTEINYL-PHOSPHATE INTERMEDIATE REMARK 900 RELATED ID: 2HNQ RELATED DB: PDB REMARK 900 PROTEIN TYROSINE PHOSPHATASE 1B COMPLEXED WITH TUNGSTATE REMARK 900 RELATED ID: 3I7Z RELATED DB: PDB REMARK 900 PROTEIN TYROSINE PHOSPHATASE 1B - TRANSITION STATE ANALOG FOR THE REMARK 900 FIRST CATALYTIC STEP DBREF 3I80 A 1 321 UNP P18031 PTN1_HUMAN 1 321 SEQRES 1 A 321 MET GLU MET GLU LYS GLU PHE GLU GLN ILE ASP LYS SER SEQRES 2 A 321 GLY SER TRP ALA ALA ILE TYR GLN ASP ILE ARG HIS GLU SEQRES 3 A 321 ALA SER ASP PHE PRO CYS ARG VAL ALA LYS LEU PRO LYS SEQRES 4 A 321 ASN LYS ASN ARG ASN ARG TYR ARG ASP VAL SER PRO PHE SEQRES 5 A 321 ASP HIS SER ARG ILE LYS LEU HIS GLN GLU ASP ASN ASP SEQRES 6 A 321 TYR ILE ASN ALA SER LEU ILE LYS MET GLU GLU ALA GLN SEQRES 7 A 321 ARG SER TYR ILE LEU THR GLN GLY PRO LEU PRO ASN THR SEQRES 8 A 321 CYS GLY HIS PHE TRP GLU MET VAL TRP GLU GLN LYS SER SEQRES 9 A 321 ARG GLY VAL VAL MET LEU ASN ARG VAL MET GLU LYS GLY SEQRES 10 A 321 SER LEU LYS CYS ALA GLN TYR TRP PRO GLN LYS GLU GLU SEQRES 11 A 321 LYS GLU MET ILE PHE GLU ASP THR ASN LEU LYS LEU THR SEQRES 12 A 321 LEU ILE SER GLU ASP ILE LYS SER TYR TYR THR VAL ARG SEQRES 13 A 321 GLN LEU GLU LEU GLU ASN LEU THR THR GLN GLU THR ARG SEQRES 14 A 321 GLU ILE LEU HIS PHE HIS TYR THR THR TRP PRO ASP PHE SEQRES 15 A 321 GLY VAL PRO GLU SER PRO ALA SER PHE LEU ASN PHE LEU SEQRES 16 A 321 PHE LYS VAL ARG GLU SER GLY SER LEU SER PRO GLU HIS SEQRES 17 A 321 GLY PRO VAL VAL VAL HIS CYS SER ALA GLY ILE GLY ARG SEQRES 18 A 321 SER GLY THR PHE CYS LEU ALA ASP THR CYS LEU LEU LEU SEQRES 19 A 321 MET ASP LYS ARG LYS ASP PRO SER SER VAL ASP ILE LYS SEQRES 20 A 321 LYS VAL LEU LEU GLU MET ARG LYS PHE ARG MET GLY LEU SEQRES 21 A 321 ILE GLN THR ALA ASP GLN LEU ARG PHE SER TYR LEU ALA SEQRES 22 A 321 VAL ILE GLU GLY ALA LYS PHE ILE MET GLY ASP SER SER SEQRES 23 A 321 VAL GLN ASP GLN TRP LYS GLU LEU SER HIS GLU ASP LEU SEQRES 24 A 321 GLU PRO PRO PRO GLU HIS ILE PRO PRO PRO PRO ARG PRO SEQRES 25 A 321 PRO LYS ARG ILE LEU GLU PRO HIS ASN HET VO4 A 322 5 HET TRS A 323 8 HET GOL A 324 6 HET GOL A 325 6 HET GOL A 326 6 HETNAM VO4 VANADATE ION HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETNAM GOL GLYCEROL HETSYN TRS TRIS BUFFER HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 VO4 O4 V 3- FORMUL 3 TRS C4 H12 N O3 1+ FORMUL 4 GOL 3(C3 H8 O3) FORMUL 7 HOH *231(H2 O) HELIX 1 1 GLU A 2 GLY A 14 1 13 HELIX 2 2 SER A 15 ALA A 27 1 13 HELIX 3 3 LEU A 37 ASN A 44 5 8 HELIX 4 4 THR A 91 GLN A 102 1 12 HELIX 5 5 SER A 187 SER A 201 1 15 HELIX 6 6 GLY A 220 LYS A 239 1 20 HELIX 7 7 ASP A 240 VAL A 244 5 5 HELIX 8 8 ASP A 245 ARG A 254 1 10 HELIX 9 9 THR A 263 MET A 282 1 20 HELIX 10 10 SER A 286 HIS A 296 1 11 SHEET 1 A 8 ALA A 69 MET A 74 0 SHEET 2 A 8 ARG A 79 THR A 84 -1 O TYR A 81 N ILE A 72 SHEET 3 A 8 VAL A 211 HIS A 214 1 O VAL A 213 N ILE A 82 SHEET 4 A 8 GLY A 106 MET A 109 1 N VAL A 108 O VAL A 212 SHEET 5 A 8 THR A 168 TYR A 176 1 O PHE A 174 N VAL A 107 SHEET 6 A 8 TYR A 153 ASN A 162 -1 N LEU A 158 O ILE A 171 SHEET 7 A 8 LEU A 140 ILE A 149 -1 N LYS A 141 O GLU A 161 SHEET 8 A 8 MET A 133 PHE A 135 -1 N MET A 133 O LEU A 142 SHEET 1 B 2 MET A 114 GLU A 115 0 SHEET 2 B 2 SER A 118 LEU A 119 -1 O SER A 118 N GLU A 115 SITE 1 AC1 12 ASP A 181 CYS A 215 SER A 216 ALA A 217 SITE 2 AC1 12 GLY A 218 ILE A 219 GLY A 220 ARG A 221 SITE 3 AC1 12 GLN A 262 GOL A 326 HOH A 490 HOH A 497 SITE 1 AC2 5 HIS A 54 LYS A 128 GLU A 129 GLU A 130 SITE 2 AC2 5 HOH A 414 SITE 1 AC3 3 PRO A 89 HOH A 510 HOH A 526 SITE 1 AC4 6 SER A 146 GLU A 147 ASP A 148 VAL A 155 SITE 2 AC4 6 GLN A 157 HOH A 491 SITE 1 AC5 8 TYR A 46 ASP A 48 PHE A 182 ALA A 217 SITE 2 AC5 8 GLN A 262 SER A 285 VO4 A 322 HOH A 497 CRYST1 87.840 87.840 103.790 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011384 0.006573 0.000000 0.00000 SCALE2 0.000000 0.013145 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009635 0.00000