data_3IAB # _entry.id 3IAB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3IAB NDB NA0097 RCSB RCSB054162 WWPDB D_1000054162 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3IAB _pdbx_database_status.recvd_initial_deposition_date 2009-07-13 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Perederina, A.' 1 'Esakova, O.A.' 2 'Quan, C.' 3 'Khanova, E.' 4 'Krasilnikov, A.S.' 5 # _citation.id primary _citation.title 'Eukaryotic ribonucleases P/MRP: the crystal structure of the P3 domain' _citation.journal_abbrev 'Embo J.' _citation.journal_volume 29 _citation.page_first 761 _citation.page_last 769 _citation.year 2010 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20075859 _citation.pdbx_database_id_DOI 10.1038/emboj.2009.396 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Perederina, A.' 1 primary 'Esakova, O.' 2 primary 'Quan, C.' 3 primary 'Khanova, E.' 4 primary 'Krasilnikov, A.S.' 5 # _cell.entry_id 3IAB _cell.length_a 126.514 _cell.length_b 126.514 _cell.length_c 76.766 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3IAB _symmetry.space_group_name_H-M 'P 42 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 93 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ribonucleases P/MRP protein subunit POP6' 18440.576 1 3.1.26.5 L141M Pop6 ? 2 polymer man 'Ribonucleases P/MRP protein subunit POP7' 15984.972 1 3.1.26.5 none Pop7 ? 3 polymer syn 'P3 domain of the RNA component of RNase MRP' 14828.875 1 3.1.26.5 ;circular permutation; A49C, A50C, U59G, U60G (yeast sequence numbering). See important note regarging nucleotide numbering in the model. ; 'P3 domain' ? 4 non-polymer syn 'ZINC ION' 65.409 3 ? ? ? ? 5 water nat water 18.015 50 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'RNA-processing protein POP6, RNases P/MRP 18.2 kDa subunit' 2 'RNA-processing protein POP7, RNases P/MRP 15.8 kDa subunit' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes ;(MSE)INGVYYNEISRDLDISSSTQCLRFLKETVIPSLANNGNNSTSIQYHGISKNDNIKKSVNKLDKQIN(MSE)ADRS LGLQQVVCIFSYGPHIQK(MSE)LSILEIFKKGYIKNNKKIYQWNKLTSFDIKREGRNELQEERLKVPILVT(MSE)VSD SEIIDLNLHSFTKQ ; ;MINGVYYNEISRDLDISSSTQCLRFLKETVIPSLANNGNNSTSIQYHGISKNDNIKKSVNKLDKQINMADRSLGLQQVVC IFSYGPHIQKMLSILEIFKKGYIKNNKKIYQWNKLTSFDIKREGRNELQEERLKVPILVTMVSDSEIIDLNLHSFTKQ ; A ? 2 'polypeptide(L)' no yes ;(MSE)ALKKNTHNKSTKRVTKHPSLKTLTHKQIHTTIFVKSTTPYVSALKRINKFLDSVHKQGSSYVAVLG(MSE)GKAV EKTLALGCHFQDQKNKKIEVYTKTIEVLDEVITEGQADID(MSE)ESDVEDDDKETQLKKRAVSGVELRIYV ; ;MALKKNTHNKSTKRVTKHPSLKTLTHKQIHTTIFVKSTTPYVSALKRINKFLDSVHKQGSSYVAVLGMGKAVEKTLALGC HFQDQKNKKIEVYTKTIEVLDEVITEGQADIDMESDVEDDDKETQLKKRAVSGVELRIYV ; B ? 3 polyribonucleotide no no GGACUCAGUAAUAUGCUUUGGAAACGAAGCUUACAAAAUGGAGUCC GGACUCAGUAAUAUGCUUUGGAAACGAAGCUUACAAAAUGGAGUCC R ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 ILE n 1 3 ASN n 1 4 GLY n 1 5 VAL n 1 6 TYR n 1 7 TYR n 1 8 ASN n 1 9 GLU n 1 10 ILE n 1 11 SER n 1 12 ARG n 1 13 ASP n 1 14 LEU n 1 15 ASP n 1 16 ILE n 1 17 SER n 1 18 SER n 1 19 SER n 1 20 THR n 1 21 GLN n 1 22 CYS n 1 23 LEU n 1 24 ARG n 1 25 PHE n 1 26 LEU n 1 27 LYS n 1 28 GLU n 1 29 THR n 1 30 VAL n 1 31 ILE n 1 32 PRO n 1 33 SER n 1 34 LEU n 1 35 ALA n 1 36 ASN n 1 37 ASN n 1 38 GLY n 1 39 ASN n 1 40 ASN n 1 41 SER n 1 42 THR n 1 43 SER n 1 44 ILE n 1 45 GLN n 1 46 TYR n 1 47 HIS n 1 48 GLY n 1 49 ILE n 1 50 SER n 1 51 LYS n 1 52 ASN n 1 53 ASP n 1 54 ASN n 1 55 ILE n 1 56 LYS n 1 57 LYS n 1 58 SER n 1 59 VAL n 1 60 ASN n 1 61 LYS n 1 62 LEU n 1 63 ASP n 1 64 LYS n 1 65 GLN n 1 66 ILE n 1 67 ASN n 1 68 MSE n 1 69 ALA n 1 70 ASP n 1 71 ARG n 1 72 SER n 1 73 LEU n 1 74 GLY n 1 75 LEU n 1 76 GLN n 1 77 GLN n 1 78 VAL n 1 79 VAL n 1 80 CYS n 1 81 ILE n 1 82 PHE n 1 83 SER n 1 84 TYR n 1 85 GLY n 1 86 PRO n 1 87 HIS n 1 88 ILE n 1 89 GLN n 1 90 LYS n 1 91 MSE n 1 92 LEU n 1 93 SER n 1 94 ILE n 1 95 LEU n 1 96 GLU n 1 97 ILE n 1 98 PHE n 1 99 LYS n 1 100 LYS n 1 101 GLY n 1 102 TYR n 1 103 ILE n 1 104 LYS n 1 105 ASN n 1 106 ASN n 1 107 LYS n 1 108 LYS n 1 109 ILE n 1 110 TYR n 1 111 GLN n 1 112 TRP n 1 113 ASN n 1 114 LYS n 1 115 LEU n 1 116 THR n 1 117 SER n 1 118 PHE n 1 119 ASP n 1 120 ILE n 1 121 LYS n 1 122 ARG n 1 123 GLU n 1 124 GLY n 1 125 ARG n 1 126 ASN n 1 127 GLU n 1 128 LEU n 1 129 GLN n 1 130 GLU n 1 131 GLU n 1 132 ARG n 1 133 LEU n 1 134 LYS n 1 135 VAL n 1 136 PRO n 1 137 ILE n 1 138 LEU n 1 139 VAL n 1 140 THR n 1 141 MSE n 1 142 VAL n 1 143 SER n 1 144 ASP n 1 145 SER n 1 146 GLU n 1 147 ILE n 1 148 ILE n 1 149 ASP n 1 150 LEU n 1 151 ASN n 1 152 LEU n 1 153 HIS n 1 154 SER n 1 155 PHE n 1 156 THR n 1 157 LYS n 1 158 GLN n 2 1 MSE n 2 2 ALA n 2 3 LEU n 2 4 LYS n 2 5 LYS n 2 6 ASN n 2 7 THR n 2 8 HIS n 2 9 ASN n 2 10 LYS n 2 11 SER n 2 12 THR n 2 13 LYS n 2 14 ARG n 2 15 VAL n 2 16 THR n 2 17 LYS n 2 18 HIS n 2 19 PRO n 2 20 SER n 2 21 LEU n 2 22 LYS n 2 23 THR n 2 24 LEU n 2 25 THR n 2 26 HIS n 2 27 LYS n 2 28 GLN n 2 29 ILE n 2 30 HIS n 2 31 THR n 2 32 THR n 2 33 ILE n 2 34 PHE n 2 35 VAL n 2 36 LYS n 2 37 SER n 2 38 THR n 2 39 THR n 2 40 PRO n 2 41 TYR n 2 42 VAL n 2 43 SER n 2 44 ALA n 2 45 LEU n 2 46 LYS n 2 47 ARG n 2 48 ILE n 2 49 ASN n 2 50 LYS n 2 51 PHE n 2 52 LEU n 2 53 ASP n 2 54 SER n 2 55 VAL n 2 56 HIS n 2 57 LYS n 2 58 GLN n 2 59 GLY n 2 60 SER n 2 61 SER n 2 62 TYR n 2 63 VAL n 2 64 ALA n 2 65 VAL n 2 66 LEU n 2 67 GLY n 2 68 MSE n 2 69 GLY n 2 70 LYS n 2 71 ALA n 2 72 VAL n 2 73 GLU n 2 74 LYS n 2 75 THR n 2 76 LEU n 2 77 ALA n 2 78 LEU n 2 79 GLY n 2 80 CYS n 2 81 HIS n 2 82 PHE n 2 83 GLN n 2 84 ASP n 2 85 GLN n 2 86 LYS n 2 87 ASN n 2 88 LYS n 2 89 LYS n 2 90 ILE n 2 91 GLU n 2 92 VAL n 2 93 TYR n 2 94 THR n 2 95 LYS n 2 96 THR n 2 97 ILE n 2 98 GLU n 2 99 VAL n 2 100 LEU n 2 101 ASP n 2 102 GLU n 2 103 VAL n 2 104 ILE n 2 105 THR n 2 106 GLU n 2 107 GLY n 2 108 GLN n 2 109 ALA n 2 110 ASP n 2 111 ILE n 2 112 ASP n 2 113 MSE n 2 114 GLU n 2 115 SER n 2 116 ASP n 2 117 VAL n 2 118 GLU n 2 119 ASP n 2 120 ASP n 2 121 ASP n 2 122 LYS n 2 123 GLU n 2 124 THR n 2 125 GLN n 2 126 LEU n 2 127 LYS n 2 128 LYS n 2 129 ARG n 2 130 ALA n 2 131 VAL n 2 132 SER n 2 133 GLY n 2 134 VAL n 2 135 GLU n 2 136 LEU n 2 137 ARG n 2 138 ILE n 2 139 TYR n 2 140 VAL n 3 1 G n 3 2 G n 3 3 A n 3 4 C n 3 5 U n 3 6 C n 3 7 A n 3 8 G n 3 9 U n 3 10 A n 3 11 A n 3 12 U n 3 13 A n 3 14 U n 3 15 G n 3 16 C n 3 17 U n 3 18 U n 3 19 U n 3 20 G n 3 21 G n 3 22 A n 3 23 A n 3 24 A n 3 25 C n 3 26 G n 3 27 A n 3 28 A n 3 29 G n 3 30 C n 3 31 U n 3 32 U n 3 33 A n 3 34 C n 3 35 A n 3 36 A n 3 37 A n 3 38 A n 3 39 U n 3 40 G n 3 41 G n 3 42 A n 3 43 G n 3 44 U n 3 45 C n 3 46 C n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? yeast ? 'POP6, YGR030C' ? ? ? ? 'Co-expression with Pop7' ? 'Saccharomyces cerevisiae' 4932 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? BL-21 ? ? ? ? ? ? ? PLASMID ? ? ? 762 ? ? 2 1 sample ? ? ? yeast ? 'POP7, RPP2, YBR1219, YBR167C' ? ? ? ? 'Co-expression with Pop6' ? 'Saccharomyces cerevisiae' 4932 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? BL-21 ? ? ? ? ? ? ? PLASMID ? ? ? 762 ? ? # _pdbx_entity_src_syn.entity_id 3 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'In vitro transcription; circular permutation of naturally occurring sequence.' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP POP6_YEAST P53218 1 ;MINGVYYNEISRDLDISSSTQCLRFLKETVIPSLANNGNNSTSIQYHGISKNDNIKKSVNKLDKQINMADRSLGLQQVVC IFSYGPHIQKMLSILEIFKKGYIKNNKKIYQWNKLTSFDIKREGRNELQEERLKVPILVTLVSDSEIIDLNLHSFTKQ ; 1 ? 2 UNP POP7_YEAST P38291 2 ;MALKKNTHNKSTKRVTKHPSLKTLTHKQIHTTIFVKSTTPYVSALKRINKFLDSVHKQGSSYVAVLGMGKAVEKTLALGC HFQDQKNKKIEVYTKTIEVLDEVITEGQADIDMESDVEDDDKETQLKKRAVSGVELRIYV ; 1 ? 3 PDB 3IAB 3IAB 3 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3IAB A 1 ? 158 ? P53218 1 ? 158 ? 1 158 2 2 3IAB B 1 ? 140 ? P38291 1 ? 140 ? 1 140 3 3 3IAB R 1 ? 46 ? 3IAB 59 ? 104 ? 59 104 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3IAB _struct_ref_seq_dif.mon_id MSE _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 141 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P53218 _struct_ref_seq_dif.db_mon_id LEU _struct_ref_seq_dif.pdbx_seq_db_seq_num 141 _struct_ref_seq_dif.details CONFLICT _struct_ref_seq_dif.pdbx_auth_seq_num 141 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 3IAB _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.12 _exptl_crystal.density_percent_sol 60.55 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 292 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.8 _exptl_crystal_grow.pdbx_details ;2M Ammonium Sulfate, 200 mM Potassium Chloride, 2% PEG 400, 5% D-trehalose, 2 mM Zinc Chloride, 5 mM Magnesium Chloride, 100 mM HEPES-Na, pH 7.8, VAPOR DIFFUSION, SITTING DROP, temperature 292K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2009-03-28 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9791 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X29A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X29A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9791 # _reflns.entry_id 3IAB _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 30 _reflns.d_resolution_high 2.7 _reflns.number_obs 16350 _reflns.number_all 17601 _reflns.percent_possible_obs 92.9 _reflns.pdbx_Rmerge_I_obs 0.057 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 82.1 _reflns.pdbx_redundancy 5.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.70 _reflns_shell.d_res_low 2.76 _reflns_shell.percent_possible_all 93.3 _reflns_shell.Rmerge_I_obs 0.374 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.0 _reflns_shell.pdbx_redundancy 2.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 934 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3IAB _refine.ls_number_reflns_obs 16346 _refine.ls_number_reflns_all 17659 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30 _refine.ls_d_res_high 2.7 _refine.ls_percent_reflns_obs 92.6 _refine.ls_R_factor_obs 0.250 _refine.ls_R_factor_all 0.250 _refine.ls_R_factor_R_work 0.250 _refine.ls_R_factor_R_free 0.265 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 821 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 89.9 _refine.aniso_B[1][1] -10.219 _refine.aniso_B[2][2] -10.219 _refine.aniso_B[3][3] 20.437 _refine.aniso_B[1][2] 0 _refine.aniso_B[1][3] 0 _refine.aniso_B[2][3] 0 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'Residues 1-3, 122-128 in Pop6 (chain A) and residues 1-13, 105-124 in Pop7 (chain B) are disordered' _refine.pdbx_starting_model none _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model Isotropic _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3IAB _refine_analyze.Luzzati_coordinate_error_obs 0.680 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2049 _refine_hist.pdbx_number_atoms_nucleic_acid 985 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 50 _refine_hist.number_atoms_total 3087 _refine_hist.d_res_high 2.7 _refine_hist.d_res_low 30 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.054 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.14 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 2.70 _refine_ls_shell.d_res_low 2.774 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.355 _refine_ls_shell.percent_reflns_obs 92.7 _refine_ls_shell.R_factor_R_free 0.333 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 44 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 970 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3IAB _struct.title 'Crystal structure of RNase P /RNase MRP proteins Pop6, Pop7 in a complex with the P3 domain of RNase MRP RNA' _struct.pdbx_descriptor 'Ribonucleases P/MRP protein subunit POP6 (E.C.3.1.26.5), Ribonucleases P/MRP protein subunit POP7 (E.C.3.1.26.5)/RNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag Y _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3IAB _struct_keywords.pdbx_keywords HYDROLASE/RNA _struct_keywords.text ;RNase P, RNase MRP, Ribonuclease P, Ribonuclease MRP, Pop6, Pop6p, Pop7, Pop7p, P3, NME1, yeast, tRNA, pre-tRNA, rRNA, Ribozyme, PROTEIN-RNA COMPLEX, ALBA, heterodimer, Coiled coil, Hydrolase, Nucleus, rRNA processing, tRNA processing, Phosphoprotein, HYDROLASE-RNA COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 5 ? I N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 18 ? THR A 29 ? SER A 18 THR A 29 1 ? 12 HELX_P HELX_P2 2 ASN A 54 ? ASN A 67 ? ASN A 54 ASN A 67 1 ? 14 HELX_P HELX_P3 3 HIS A 87 ? LYS A 104 ? HIS A 87 LYS A 104 1 ? 18 HELX_P HELX_P4 4 THR B 25 ? HIS B 30 ? THR B 25 HIS B 30 1 ? 6 HELX_P HELX_P5 5 PRO B 40 ? GLY B 59 ? PRO B 40 GLY B 59 1 ? 20 HELX_P HELX_P6 6 ALA B 71 ? GLN B 85 ? ALA B 71 GLN B 85 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ASN 67 C ? ? ? 1_555 A MSE 68 N ? ? A ASN 67 A MSE 68 1_555 ? ? ? ? ? ? ? 1.334 ? covale2 covale ? ? A MSE 68 C ? ? ? 1_555 A ALA 69 N ? ? A MSE 68 A ALA 69 1_555 ? ? ? ? ? ? ? 1.332 ? covale3 covale ? ? A LYS 90 C ? ? ? 1_555 A MSE 91 N ? ? A LYS 90 A MSE 91 1_555 ? ? ? ? ? ? ? 1.331 ? covale4 covale ? ? A MSE 91 C ? ? ? 1_555 A LEU 92 N ? ? A MSE 91 A LEU 92 1_555 ? ? ? ? ? ? ? 1.333 ? covale5 covale ? ? A THR 140 C ? ? ? 1_555 A MSE 141 N ? ? A THR 140 A MSE 141 1_555 ? ? ? ? ? ? ? 1.331 ? covale6 covale ? ? A MSE 141 C ? ? ? 1_555 A VAL 142 N ? ? A MSE 141 A VAL 142 1_555 ? ? ? ? ? ? ? 1.328 ? covale7 covale ? ? B GLY 67 C ? ? ? 1_555 B MSE 68 N ? ? B GLY 67 B MSE 68 1_555 ? ? ? ? ? ? ? 1.330 ? covale8 covale ? ? B MSE 68 C ? ? ? 1_555 B GLY 69 N ? ? B MSE 68 B GLY 69 1_555 ? ? ? ? ? ? ? 1.332 ? metalc1 metalc ? ? B HIS 18 ND1 ? ? ? 1_555 D ZN . ZN ? ? B HIS 18 B ZN 141 1_555 ? ? ? ? ? ? ? 2.114 ? metalc2 metalc ? ? B HIS 26 NE2 ? ? ? 1_555 F ZN . ZN ? ? B HIS 26 B ZN 143 1_555 ? ? ? ? ? ? ? 2.328 ? metalc3 metalc ? ? B HIS 30 NE2 ? ? ? 1_555 F ZN . ZN ? ? B HIS 30 B ZN 143 1_555 ? ? ? ? ? ? ? 2.196 ? metalc4 metalc ? ? B HIS 30 NE2 ? ? ? 1_555 E ZN . ZN ? ? B HIS 30 B ZN 142 1_555 ? ? ? ? ? ? ? 2.396 ? hydrog1 hydrog ? ? C G 1 N1 ? ? ? 1_555 C C 46 N3 ? ? R G 59 R C 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog2 hydrog ? ? C G 1 N2 ? ? ? 1_555 C C 46 O2 ? ? R G 59 R C 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog3 hydrog ? ? C G 1 O6 ? ? ? 1_555 C C 46 N4 ? ? R G 59 R C 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog4 hydrog ? ? C G 2 N1 ? ? ? 1_555 C C 45 N3 ? ? R G 60 R C 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog5 hydrog ? ? C G 2 N2 ? ? ? 1_555 C C 45 O2 ? ? R G 60 R C 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog6 hydrog ? ? C G 2 O6 ? ? ? 1_555 C C 45 N4 ? ? R G 60 R C 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog7 hydrog ? ? C A 3 N1 ? ? ? 1_555 C U 44 N3 ? ? R A 61 R U 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog8 hydrog ? ? C A 3 N6 ? ? ? 1_555 C U 44 O4 ? ? R A 61 R U 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog9 hydrog ? ? C C 4 N3 ? ? ? 1_555 C G 43 N1 ? ? R C 62 R G 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog10 hydrog ? ? C C 4 N4 ? ? ? 1_555 C G 43 O6 ? ? R C 62 R G 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog11 hydrog ? ? C C 4 O2 ? ? ? 1_555 C G 43 N2 ? ? R C 62 R G 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog12 hydrog ? ? C U 5 N3 ? ? ? 1_555 C A 42 N1 ? ? R U 63 R A 100 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog13 hydrog ? ? C U 5 O4 ? ? ? 1_555 C A 42 N6 ? ? R U 63 R A 100 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog14 hydrog ? ? C C 6 N3 ? ? ? 1_555 C G 41 N1 ? ? R C 64 R G 99 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog15 hydrog ? ? C C 6 N4 ? ? ? 1_555 C G 41 O6 ? ? R C 64 R G 99 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog16 hydrog ? ? C C 6 O2 ? ? ? 1_555 C G 41 N2 ? ? R C 64 R G 99 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog17 hydrog ? ? C A 10 N1 ? ? ? 1_555 C A 13 N6 ? ? R A 68 R A 71 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? hydrog18 hydrog ? ? C G 15 N1 ? ? ? 1_555 C C 30 N3 ? ? R G 73 R C 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog19 hydrog ? ? C G 15 N2 ? ? ? 1_555 C C 30 O2 ? ? R G 73 R C 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog20 hydrog ? ? C G 15 O6 ? ? ? 1_555 C C 30 N4 ? ? R G 73 R C 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog21 hydrog ? ? C C 16 N3 ? ? ? 1_555 C G 29 N1 ? ? R C 74 R G 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog22 hydrog ? ? C C 16 N4 ? ? ? 1_555 C G 29 O6 ? ? R C 74 R G 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog23 hydrog ? ? C C 16 O2 ? ? ? 1_555 C G 29 N2 ? ? R C 74 R G 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog24 hydrog ? ? C U 17 N3 ? ? ? 1_555 C A 28 N1 ? ? R U 75 R A 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog25 hydrog ? ? C U 17 O4 ? ? ? 1_555 C A 28 N6 ? ? R U 75 R A 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog26 hydrog ? ? C U 18 N3 ? ? ? 1_555 C A 27 N1 ? ? R U 76 R A 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog27 hydrog ? ? C U 18 O4 ? ? ? 1_555 C A 27 N6 ? ? R U 76 R A 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog28 hydrog ? ? C U 19 N3 ? ? ? 1_555 C G 26 O6 ? ? R U 77 R G 84 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? hydrog29 hydrog ? ? C U 19 O2 ? ? ? 1_555 C G 26 N1 ? ? R U 77 R G 84 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? hydrog30 hydrog ? ? C G 20 N1 ? ? ? 1_555 C C 25 N3 ? ? R G 78 R C 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog31 hydrog ? ? C G 20 N2 ? ? ? 1_555 C C 25 O2 ? ? R G 78 R C 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog32 hydrog ? ? C G 20 O6 ? ? ? 1_555 C C 25 N4 ? ? R G 78 R C 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog33 hydrog ? ? C G 21 N2 ? ? ? 1_555 C A 24 N7 ? ? R G 79 R A 82 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 4 ? C ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 10 ? ARG A 12 ? ILE A 10 ARG A 12 A 2 VAL A 5 ? TYR A 7 ? VAL A 5 TYR A 7 A 3 TYR A 110 ? ILE A 120 ? TYR A 110 ILE A 120 A 4 LEU A 133 ? SER A 143 ? LEU A 133 SER A 143 A 5 GLN A 76 ? TYR A 84 ? GLN A 76 TYR A 84 A 6 THR A 42 ? GLY A 48 ? THR A 42 GLY A 48 B 1 ILE A 10 ? ARG A 12 ? ILE A 10 ARG A 12 B 2 VAL A 5 ? TYR A 7 ? VAL A 5 TYR A 7 B 3 TYR A 110 ? ILE A 120 ? TYR A 110 ILE A 120 B 4 THR A 156 ? LYS A 157 ? THR A 156 LYS A 157 C 1 THR B 16 ? LYS B 17 ? THR B 16 LYS B 17 C 2 ILE B 90 ? GLU B 102 ? ILE B 90 GLU B 102 C 3 LEU B 126 ? TYR B 139 ? LEU B 126 TYR B 139 C 4 TYR B 62 ? MSE B 68 ? TYR B 62 MSE B 68 C 5 THR B 32 ? PHE B 34 ? THR B 32 PHE B 34 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE A 10 ? O ILE A 10 N TYR A 7 ? N TYR A 7 A 2 3 N TYR A 6 ? N TYR A 6 O ASP A 119 ? O ASP A 119 A 3 4 N PHE A 118 ? N PHE A 118 O VAL A 135 ? O VAL A 135 A 4 5 O THR A 140 ? O THR A 140 N ILE A 81 ? N ILE A 81 A 5 6 O CYS A 80 ? O CYS A 80 N GLN A 45 ? N GLN A 45 B 1 2 O ILE A 10 ? O ILE A 10 N TYR A 7 ? N TYR A 7 B 2 3 N TYR A 6 ? N TYR A 6 O ASP A 119 ? O ASP A 119 B 3 4 N ASN A 113 ? N ASN A 113 O THR A 156 ? O THR A 156 C 1 2 N THR B 16 ? N THR B 16 O GLU B 102 ? O GLU B 102 C 2 3 N LYS B 95 ? N LYS B 95 O GLY B 133 ? O GLY B 133 C 3 4 O VAL B 134 ? O VAL B 134 N GLY B 67 ? N GLY B 67 C 4 5 O ALA B 64 ? O ALA B 64 N ILE B 33 ? N ILE B 33 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE ZN B 141' AC2 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE ZN B 142' AC3 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE ZN B 143' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 HIS B 18 ? HIS B 18 . ? 1_555 ? 2 AC1 2 HIS B 18 ? HIS B 18 . ? 7_556 ? 3 AC2 3 HIS B 26 ? HIS B 26 . ? 1_555 ? 4 AC2 3 HIS B 30 ? HIS B 30 . ? 1_555 ? 5 AC2 3 ZN F . ? ZN B 143 . ? 1_555 ? 6 AC3 3 HIS B 26 ? HIS B 26 . ? 1_555 ? 7 AC3 3 HIS B 30 ? HIS B 30 . ? 1_555 ? 8 AC3 3 ZN E . ? ZN B 142 . ? 1_555 ? # _database_PDB_matrix.entry_id 3IAB _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3IAB _atom_sites.fract_transf_matrix[1][1] 0.007904 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007904 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013027 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S SE ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 ? ? ? A . n A 1 2 ILE 2 2 ? ? ? A . n A 1 3 ASN 3 3 ? ? ? A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 TYR 6 6 6 TYR TYR A . n A 1 7 TYR 7 7 7 TYR TYR A . n A 1 8 ASN 8 8 8 ASN ASN A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 ILE 10 10 10 ILE ILE A . n A 1 11 SER 11 11 11 SER SER A . n A 1 12 ARG 12 12 12 ARG ARG A . n A 1 13 ASP 13 13 13 ASP ASP A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 ASP 15 15 15 ASP ASP A . n A 1 16 ILE 16 16 16 ILE ILE A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 SER 19 19 19 SER SER A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 GLN 21 21 21 GLN GLN A . n A 1 22 CYS 22 22 22 CYS CYS A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 PHE 25 25 25 PHE PHE A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 GLU 28 28 28 GLU GLU A . n A 1 29 THR 29 29 29 THR THR A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 ILE 31 31 31 ILE ILE A . n A 1 32 PRO 32 32 32 PRO PRO A . n A 1 33 SER 33 33 33 SER SER A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 ALA 35 35 35 ALA ALA A . n A 1 36 ASN 36 36 36 ASN ASN A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 ASN 39 39 39 ASN ASN A . n A 1 40 ASN 40 40 40 ASN ASN A . n A 1 41 SER 41 41 41 SER SER A . n A 1 42 THR 42 42 42 THR THR A . n A 1 43 SER 43 43 43 SER SER A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 GLN 45 45 45 GLN GLN A . n A 1 46 TYR 46 46 46 TYR TYR A . n A 1 47 HIS 47 47 47 HIS HIS A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 ILE 49 49 49 ILE ILE A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 LYS 51 51 51 LYS LYS A . n A 1 52 ASN 52 52 52 ASN ASN A . n A 1 53 ASP 53 53 53 ASP ASP A . n A 1 54 ASN 54 54 54 ASN ASN A . n A 1 55 ILE 55 55 55 ILE ILE A . n A 1 56 LYS 56 56 56 LYS LYS A . n A 1 57 LYS 57 57 57 LYS LYS A . n A 1 58 SER 58 58 58 SER SER A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 ASN 60 60 60 ASN ASN A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 ASP 63 63 63 ASP ASP A . n A 1 64 LYS 64 64 64 LYS LYS A . n A 1 65 GLN 65 65 65 GLN GLN A . n A 1 66 ILE 66 66 66 ILE ILE A . n A 1 67 ASN 67 67 67 ASN ASN A . n A 1 68 MSE 68 68 68 MSE MSE A . n A 1 69 ALA 69 69 69 ALA ALA A . n A 1 70 ASP 70 70 70 ASP ASP A . n A 1 71 ARG 71 71 71 ARG ARG A . n A 1 72 SER 72 72 72 SER SER A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 GLN 76 76 76 GLN GLN A . n A 1 77 GLN 77 77 77 GLN GLN A . n A 1 78 VAL 78 78 78 VAL VAL A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 CYS 80 80 80 CYS CYS A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 PHE 82 82 82 PHE PHE A . n A 1 83 SER 83 83 83 SER SER A . n A 1 84 TYR 84 84 84 TYR TYR A . n A 1 85 GLY 85 85 85 GLY GLY A . n A 1 86 PRO 86 86 86 PRO PRO A . n A 1 87 HIS 87 87 87 HIS HIS A . n A 1 88 ILE 88 88 88 ILE ILE A . n A 1 89 GLN 89 89 89 GLN GLN A . n A 1 90 LYS 90 90 90 LYS LYS A . n A 1 91 MSE 91 91 91 MSE MSE A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 SER 93 93 93 SER SER A . n A 1 94 ILE 94 94 94 ILE ILE A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 GLU 96 96 96 GLU GLU A . n A 1 97 ILE 97 97 97 ILE ILE A . n A 1 98 PHE 98 98 98 PHE PHE A . n A 1 99 LYS 99 99 99 LYS LYS A . n A 1 100 LYS 100 100 100 LYS LYS A . n A 1 101 GLY 101 101 101 GLY GLY A . n A 1 102 TYR 102 102 102 TYR TYR A . n A 1 103 ILE 103 103 103 ILE ILE A . n A 1 104 LYS 104 104 104 LYS LYS A . n A 1 105 ASN 105 105 105 ASN ASN A . n A 1 106 ASN 106 106 106 ASN ASN A . n A 1 107 LYS 107 107 107 LYS LYS A . n A 1 108 LYS 108 108 108 LYS LYS A . n A 1 109 ILE 109 109 109 ILE ILE A . n A 1 110 TYR 110 110 110 TYR TYR A . n A 1 111 GLN 111 111 111 GLN GLN A . n A 1 112 TRP 112 112 112 TRP TRP A . n A 1 113 ASN 113 113 113 ASN ASN A . n A 1 114 LYS 114 114 114 LYS LYS A . n A 1 115 LEU 115 115 115 LEU LEU A . n A 1 116 THR 116 116 116 THR THR A . n A 1 117 SER 117 117 117 SER SER A . n A 1 118 PHE 118 118 118 PHE PHE A . n A 1 119 ASP 119 119 119 ASP ASP A . n A 1 120 ILE 120 120 120 ILE ILE A . n A 1 121 LYS 121 121 121 LYS LYS A . n A 1 122 ARG 122 122 ? ? ? A . n A 1 123 GLU 123 123 ? ? ? A . n A 1 124 GLY 124 124 ? ? ? A . n A 1 125 ARG 125 125 ? ? ? A . n A 1 126 ASN 126 126 ? ? ? A . n A 1 127 GLU 127 127 ? ? ? A . n A 1 128 LEU 128 128 ? ? ? A . n A 1 129 GLN 129 129 129 GLN GLN A . n A 1 130 GLU 130 130 130 GLU GLU A . n A 1 131 GLU 131 131 131 GLU GLU A . n A 1 132 ARG 132 132 132 ARG ARG A . n A 1 133 LEU 133 133 133 LEU LEU A . n A 1 134 LYS 134 134 134 LYS LYS A . n A 1 135 VAL 135 135 135 VAL VAL A . n A 1 136 PRO 136 136 136 PRO PRO A . n A 1 137 ILE 137 137 137 ILE ILE A . n A 1 138 LEU 138 138 138 LEU LEU A . n A 1 139 VAL 139 139 139 VAL VAL A . n A 1 140 THR 140 140 140 THR THR A . n A 1 141 MSE 141 141 141 MSE MSE A . n A 1 142 VAL 142 142 142 VAL VAL A . n A 1 143 SER 143 143 143 SER SER A . n A 1 144 ASP 144 144 144 ASP ASP A . n A 1 145 SER 145 145 145 SER SER A . n A 1 146 GLU 146 146 146 GLU GLU A . n A 1 147 ILE 147 147 147 ILE ILE A . n A 1 148 ILE 148 148 148 ILE ILE A . n A 1 149 ASP 149 149 149 ASP ASP A . n A 1 150 LEU 150 150 150 LEU LEU A . n A 1 151 ASN 151 151 151 ASN ASN A . n A 1 152 LEU 152 152 152 LEU LEU A . n A 1 153 HIS 153 153 153 HIS HIS A . n A 1 154 SER 154 154 154 SER SER A . n A 1 155 PHE 155 155 155 PHE PHE A . n A 1 156 THR 156 156 156 THR THR A . n A 1 157 LYS 157 157 157 LYS LYS A . n A 1 158 GLN 158 158 158 GLN GLN A . n B 2 1 MSE 1 1 ? ? ? B . n B 2 2 ALA 2 2 ? ? ? B . n B 2 3 LEU 3 3 ? ? ? B . n B 2 4 LYS 4 4 ? ? ? B . n B 2 5 LYS 5 5 ? ? ? B . n B 2 6 ASN 6 6 ? ? ? B . n B 2 7 THR 7 7 ? ? ? B . n B 2 8 HIS 8 8 ? ? ? B . n B 2 9 ASN 9 9 ? ? ? B . n B 2 10 LYS 10 10 ? ? ? B . n B 2 11 SER 11 11 ? ? ? B . n B 2 12 THR 12 12 ? ? ? B . n B 2 13 LYS 13 13 ? ? ? B . n B 2 14 ARG 14 14 14 ARG ARG B . n B 2 15 VAL 15 15 15 VAL VAL B . n B 2 16 THR 16 16 16 THR THR B . n B 2 17 LYS 17 17 17 LYS LYS B . n B 2 18 HIS 18 18 18 HIS HIS B . n B 2 19 PRO 19 19 19 PRO PRO B . n B 2 20 SER 20 20 20 SER SER B . n B 2 21 LEU 21 21 21 LEU LEU B . n B 2 22 LYS 22 22 22 LYS LYS B . n B 2 23 THR 23 23 23 THR THR B . n B 2 24 LEU 24 24 24 LEU LEU B . n B 2 25 THR 25 25 25 THR THR B . n B 2 26 HIS 26 26 26 HIS HIS B . n B 2 27 LYS 27 27 27 LYS LYS B . n B 2 28 GLN 28 28 28 GLN GLN B . n B 2 29 ILE 29 29 29 ILE ILE B . n B 2 30 HIS 30 30 30 HIS HIS B . n B 2 31 THR 31 31 31 THR THR B . n B 2 32 THR 32 32 32 THR THR B . n B 2 33 ILE 33 33 33 ILE ILE B . n B 2 34 PHE 34 34 34 PHE PHE B . n B 2 35 VAL 35 35 35 VAL VAL B . n B 2 36 LYS 36 36 36 LYS LYS B . n B 2 37 SER 37 37 37 SER SER B . n B 2 38 THR 38 38 38 THR THR B . n B 2 39 THR 39 39 39 THR THR B . n B 2 40 PRO 40 40 40 PRO PRO B . n B 2 41 TYR 41 41 41 TYR TYR B . n B 2 42 VAL 42 42 42 VAL VAL B . n B 2 43 SER 43 43 43 SER SER B . n B 2 44 ALA 44 44 44 ALA ALA B . n B 2 45 LEU 45 45 45 LEU LEU B . n B 2 46 LYS 46 46 46 LYS LYS B . n B 2 47 ARG 47 47 47 ARG ARG B . n B 2 48 ILE 48 48 48 ILE ILE B . n B 2 49 ASN 49 49 49 ASN ASN B . n B 2 50 LYS 50 50 50 LYS LYS B . n B 2 51 PHE 51 51 51 PHE PHE B . n B 2 52 LEU 52 52 52 LEU LEU B . n B 2 53 ASP 53 53 53 ASP ASP B . n B 2 54 SER 54 54 54 SER SER B . n B 2 55 VAL 55 55 55 VAL VAL B . n B 2 56 HIS 56 56 56 HIS HIS B . n B 2 57 LYS 57 57 57 LYS LYS B . n B 2 58 GLN 58 58 58 GLN GLN B . n B 2 59 GLY 59 59 59 GLY GLY B . n B 2 60 SER 60 60 60 SER SER B . n B 2 61 SER 61 61 61 SER SER B . n B 2 62 TYR 62 62 62 TYR TYR B . n B 2 63 VAL 63 63 63 VAL VAL B . n B 2 64 ALA 64 64 64 ALA ALA B . n B 2 65 VAL 65 65 65 VAL VAL B . n B 2 66 LEU 66 66 66 LEU LEU B . n B 2 67 GLY 67 67 67 GLY GLY B . n B 2 68 MSE 68 68 68 MSE MSE B . n B 2 69 GLY 69 69 69 GLY GLY B . n B 2 70 LYS 70 70 70 LYS LYS B . n B 2 71 ALA 71 71 71 ALA ALA B . n B 2 72 VAL 72 72 72 VAL VAL B . n B 2 73 GLU 73 73 73 GLU GLU B . n B 2 74 LYS 74 74 74 LYS LYS B . n B 2 75 THR 75 75 75 THR THR B . n B 2 76 LEU 76 76 76 LEU LEU B . n B 2 77 ALA 77 77 77 ALA ALA B . n B 2 78 LEU 78 78 78 LEU LEU B . n B 2 79 GLY 79 79 79 GLY GLY B . n B 2 80 CYS 80 80 80 CYS CYS B . n B 2 81 HIS 81 81 81 HIS HIS B . n B 2 82 PHE 82 82 82 PHE PHE B . n B 2 83 GLN 83 83 83 GLN GLN B . n B 2 84 ASP 84 84 84 ASP ASP B . n B 2 85 GLN 85 85 85 GLN GLN B . n B 2 86 LYS 86 86 86 LYS LYS B . n B 2 87 ASN 87 87 87 ASN ASN B . n B 2 88 LYS 88 88 88 LYS LYS B . n B 2 89 LYS 89 89 89 LYS LYS B . n B 2 90 ILE 90 90 90 ILE ILE B . n B 2 91 GLU 91 91 91 GLU GLU B . n B 2 92 VAL 92 92 92 VAL VAL B . n B 2 93 TYR 93 93 93 TYR TYR B . n B 2 94 THR 94 94 94 THR THR B . n B 2 95 LYS 95 95 95 LYS LYS B . n B 2 96 THR 96 96 96 THR THR B . n B 2 97 ILE 97 97 97 ILE ILE B . n B 2 98 GLU 98 98 98 GLU GLU B . n B 2 99 VAL 99 99 99 VAL VAL B . n B 2 100 LEU 100 100 100 LEU LEU B . n B 2 101 ASP 101 101 101 ASP ASP B . n B 2 102 GLU 102 102 102 GLU GLU B . n B 2 103 VAL 103 103 103 VAL VAL B . n B 2 104 ILE 104 104 104 ILE ILE B . n B 2 105 THR 105 105 ? ? ? B . n B 2 106 GLU 106 106 ? ? ? B . n B 2 107 GLY 107 107 ? ? ? B . n B 2 108 GLN 108 108 ? ? ? B . n B 2 109 ALA 109 109 ? ? ? B . n B 2 110 ASP 110 110 ? ? ? B . n B 2 111 ILE 111 111 ? ? ? B . n B 2 112 ASP 112 112 ? ? ? B . n B 2 113 MSE 113 113 ? ? ? B . n B 2 114 GLU 114 114 ? ? ? B . n B 2 115 SER 115 115 ? ? ? B . n B 2 116 ASP 116 116 ? ? ? B . n B 2 117 VAL 117 117 ? ? ? B . n B 2 118 GLU 118 118 ? ? ? B . n B 2 119 ASP 119 119 ? ? ? B . n B 2 120 ASP 120 120 ? ? ? B . n B 2 121 ASP 121 121 ? ? ? B . n B 2 122 LYS 122 122 ? ? ? B . n B 2 123 GLU 123 123 ? ? ? B . n B 2 124 THR 124 124 ? ? ? B . n B 2 125 GLN 125 125 125 GLN GLN B . n B 2 126 LEU 126 126 126 LEU LEU B . n B 2 127 LYS 127 127 127 LYS LYS B . n B 2 128 LYS 128 128 128 LYS LYS B . n B 2 129 ARG 129 129 129 ARG ARG B . n B 2 130 ALA 130 130 130 ALA ALA B . n B 2 131 VAL 131 131 131 VAL VAL B . n B 2 132 SER 132 132 132 SER SER B . n B 2 133 GLY 133 133 133 GLY GLY B . n B 2 134 VAL 134 134 134 VAL VAL B . n B 2 135 GLU 135 135 135 GLU GLU B . n B 2 136 LEU 136 136 136 LEU LEU B . n B 2 137 ARG 137 137 137 ARG ARG B . n B 2 138 ILE 138 138 138 ILE ILE B . n B 2 139 TYR 139 139 139 TYR TYR B . n B 2 140 VAL 140 140 140 VAL VAL B . n C 3 1 G 1 59 59 G G R . n C 3 2 G 2 60 60 G G R . n C 3 3 A 3 61 61 A A R . n C 3 4 C 4 62 62 C C R . n C 3 5 U 5 63 63 U U R . n C 3 6 C 6 64 64 C C R . n C 3 7 A 7 65 65 A A R . n C 3 8 G 8 66 66 G G R . n C 3 9 U 9 67 67 U U R . n C 3 10 A 10 68 68 A A R . n C 3 11 A 11 69 69 A A R . n C 3 12 U 12 70 70 U U R . n C 3 13 A 13 71 71 A A R . n C 3 14 U 14 72 72 U U R . n C 3 15 G 15 73 73 G G R . n C 3 16 C 16 74 74 C C R . n C 3 17 U 17 75 75 U U R . n C 3 18 U 18 76 76 U U R . n C 3 19 U 19 77 77 U U R . n C 3 20 G 20 78 78 G G R . n C 3 21 G 21 79 79 G G R . n C 3 22 A 22 80 80 A A R . n C 3 23 A 23 81 81 A A R . n C 3 24 A 24 82 82 A A R . n C 3 25 C 25 83 83 C C R . n C 3 26 G 26 84 84 G G R . n C 3 27 A 27 85 85 A A R . n C 3 28 A 28 86 86 A A R . n C 3 29 G 29 87 87 G G R . n C 3 30 C 30 88 88 C C R . n C 3 31 U 31 89 89 U U R . n C 3 32 U 32 90 90 U U R . n C 3 33 A 33 91 91 A A R . n C 3 34 C 34 92 92 C C R . n C 3 35 A 35 93 93 A A R . n C 3 36 A 36 94 94 A A R . n C 3 37 A 37 95 95 A A R . n C 3 38 A 38 96 96 A A R . n C 3 39 U 39 97 97 U U R . n C 3 40 G 40 98 98 G G R . n C 3 41 G 41 99 99 G G R . n C 3 42 A 42 100 100 A A R . n C 3 43 G 43 101 101 G G R . n C 3 44 U 44 102 102 U U R . n C 3 45 C 45 103 103 C C R . n C 3 46 C 46 104 104 C C R . n # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 68 A MSE 68 ? MET SELENOMETHIONINE 2 A MSE 91 A MSE 91 ? MET SELENOMETHIONINE 3 A MSE 141 A MSE 141 ? MET SELENOMETHIONINE 4 B MSE 68 B MSE 68 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA trimeric 3 2 software_defined_assembly PISA hexameric 6 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H,I 2 1,2 A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7190 ? 1 MORE -107 ? 1 'SSA (A^2)' 19030 ? 2 'ABSA (A^2)' 17150 ? 2 MORE -283 ? 2 'SSA (A^2)' 35380 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_556 y,x,-z+3/2 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 115.1490000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id B _pdbx_struct_special_symmetry.auth_comp_id ZN _pdbx_struct_special_symmetry.auth_seq_id 141 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id ZN _pdbx_struct_special_symmetry.label_seq_id . # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id NE2 _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id B _pdbx_struct_conn_angle.ptnr1_label_comp_id HIS _pdbx_struct_conn_angle.ptnr1_label_seq_id 26 _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id B _pdbx_struct_conn_angle.ptnr1_auth_comp_id HIS _pdbx_struct_conn_angle.ptnr1_auth_seq_id 26 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id ZN _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id F _pdbx_struct_conn_angle.ptnr2_label_comp_id ZN _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id B _pdbx_struct_conn_angle.ptnr2_auth_comp_id ZN _pdbx_struct_conn_angle.ptnr2_auth_seq_id 143 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id NE2 _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id B _pdbx_struct_conn_angle.ptnr3_label_comp_id HIS _pdbx_struct_conn_angle.ptnr3_label_seq_id 30 _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id B _pdbx_struct_conn_angle.ptnr3_auth_comp_id HIS _pdbx_struct_conn_angle.ptnr3_auth_seq_id 30 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 101.3 _pdbx_struct_conn_angle.value_esd ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-01-26 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 SHARP phasing . ? 2 CNS refinement . ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _pdbx_entry_details.entry_id 3IAB _pdbx_entry_details.sequence_details ;THE MODEL INCLUDES NUCLEOTIDES 29-50 AND 59-79 OF THE ORIGINAL YEAST P3 DOMAIN. THE CRYSTALLIZED CONSTRUCT CONTAINS A GAAA LINKER CONNECTING G78 AND C29 (YEAST NUMBERING). IN THE MODEL, THE NUMBERING OF NUCLEOTIDES 59 TO 78 MATCHES THAT IN YEAST; THE MODEL NUCLEOTIDES 79-82 ARE THE LINKER; THE NUMBERING OF NUCLEOTIDES 83-104 IS SHIFTED RELATIVE TO THAT IN YEAST BY 54 (YEAST NUCLEOTIDE 29 IS CALLED 83 IN THE MODEL, ETC). ; _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 N A ILE 88 ? ? O A HOH 174 ? ? 2.05 2 1 OP2 R G 78 ? ? O R HOH 15 ? ? 2.11 3 1 "O2'" R A 93 ? ? OP2 R A 95 ? ? 2.15 4 1 O A TYR 84 ? ? O A HOH 174 ? ? 2.18 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "C2'" _pdbx_validate_rmsd_angle.auth_asym_id_1 R _pdbx_validate_rmsd_angle.auth_comp_id_1 A _pdbx_validate_rmsd_angle.auth_seq_id_1 94 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 "C3'" _pdbx_validate_rmsd_angle.auth_asym_id_2 R _pdbx_validate_rmsd_angle.auth_comp_id_2 A _pdbx_validate_rmsd_angle.auth_seq_id_2 94 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 "O3'" _pdbx_validate_rmsd_angle.auth_asym_id_3 R _pdbx_validate_rmsd_angle.auth_comp_id_3 A _pdbx_validate_rmsd_angle.auth_seq_id_3 94 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 125.30 _pdbx_validate_rmsd_angle.angle_target_value 113.70 _pdbx_validate_rmsd_angle.angle_deviation 11.60 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.60 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 9 ? ? 67.86 -0.48 2 1 THR A 29 ? ? -121.19 -56.15 3 1 LEU A 152 ? ? -119.37 60.26 4 1 ASP B 84 ? ? -96.24 -64.21 5 1 ASN B 87 ? ? 39.04 51.84 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 1 ? A MSE 1 2 1 Y 1 A ILE 2 ? A ILE 2 3 1 Y 1 A ASN 3 ? A ASN 3 4 1 Y 1 A ARG 122 ? A ARG 122 5 1 Y 1 A GLU 123 ? A GLU 123 6 1 Y 1 A GLY 124 ? A GLY 124 7 1 Y 1 A ARG 125 ? A ARG 125 8 1 Y 1 A ASN 126 ? A ASN 126 9 1 Y 1 A GLU 127 ? A GLU 127 10 1 Y 1 A LEU 128 ? A LEU 128 11 1 Y 1 B MSE 1 ? B MSE 1 12 1 Y 1 B ALA 2 ? B ALA 2 13 1 Y 1 B LEU 3 ? B LEU 3 14 1 Y 1 B LYS 4 ? B LYS 4 15 1 Y 1 B LYS 5 ? B LYS 5 16 1 Y 1 B ASN 6 ? B ASN 6 17 1 Y 1 B THR 7 ? B THR 7 18 1 Y 1 B HIS 8 ? B HIS 8 19 1 Y 1 B ASN 9 ? B ASN 9 20 1 Y 1 B LYS 10 ? B LYS 10 21 1 Y 1 B SER 11 ? B SER 11 22 1 Y 1 B THR 12 ? B THR 12 23 1 Y 1 B LYS 13 ? B LYS 13 24 1 Y 1 B THR 105 ? B THR 105 25 1 Y 1 B GLU 106 ? B GLU 106 26 1 Y 1 B GLY 107 ? B GLY 107 27 1 Y 1 B GLN 108 ? B GLN 108 28 1 Y 1 B ALA 109 ? B ALA 109 29 1 Y 1 B ASP 110 ? B ASP 110 30 1 Y 1 B ILE 111 ? B ILE 111 31 1 Y 1 B ASP 112 ? B ASP 112 32 1 Y 1 B MSE 113 ? B MSE 113 33 1 Y 1 B GLU 114 ? B GLU 114 34 1 Y 1 B SER 115 ? B SER 115 35 1 Y 1 B ASP 116 ? B ASP 116 36 1 Y 1 B VAL 117 ? B VAL 117 37 1 Y 1 B GLU 118 ? B GLU 118 38 1 Y 1 B ASP 119 ? B ASP 119 39 1 Y 1 B ASP 120 ? B ASP 120 40 1 Y 1 B ASP 121 ? B ASP 121 41 1 Y 1 B LYS 122 ? B LYS 122 42 1 Y 1 B GLU 123 ? B GLU 123 43 1 Y 1 B THR 124 ? B THR 124 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3IAB 'double helix' 3IAB 'a-form double helix' 3IAB tetraloop 3IAB 'mismatched base pair' 3IAB 'internal loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C G 1 1_555 C C 46 1_555 -0.216 -0.026 -0.032 -11.154 1.030 -0.381 1 R_G59:C104_R R 59 ? R 104 ? 19 1 1 C G 2 1_555 C C 45 1_555 -0.416 -0.115 0.197 -5.205 -9.395 3.199 2 R_G60:C103_R R 60 ? R 103 ? 19 1 1 C A 3 1_555 C U 44 1_555 0.027 -0.071 -0.017 -2.717 -10.058 4.777 3 R_A61:U102_R R 61 ? R 102 ? 20 1 1 C C 4 1_555 C G 43 1_555 0.064 -0.123 0.164 6.253 -11.108 -0.160 4 R_C62:G101_R R 62 ? R 101 ? 19 1 1 C U 5 1_555 C A 42 1_555 0.022 -0.217 0.036 0.920 -4.247 -0.362 5 R_U63:A100_R R 63 ? R 100 ? 20 1 1 C C 6 1_555 C G 41 1_555 0.278 -0.193 0.265 -1.381 -1.093 1.351 6 R_C64:G99_R R 64 ? R 99 ? 19 1 1 C A 10 1_555 C A 13 1_555 -2.948 2.375 1.704 23.647 -11.534 39.695 7 R_A68:A71_R R 68 ? R 71 ? ? ? 1 C G 15 1_555 C C 30 1_555 -0.355 -0.209 -0.001 -1.051 -10.081 -3.750 8 R_G73:C88_R R 73 ? R 88 ? 19 1 1 C C 16 1_555 C G 29 1_555 0.249 -0.291 -0.371 8.416 -16.326 2.368 9 R_C74:G87_R R 74 ? R 87 ? 19 1 1 C U 17 1_555 C A 28 1_555 0.093 -0.130 -0.346 11.443 -17.793 7.345 10 R_U75:A86_R R 75 ? R 86 ? 20 1 1 C U 18 1_555 C A 27 1_555 0.102 -0.147 -0.394 13.301 -17.858 7.109 11 R_U76:A85_R R 76 ? R 85 ? 20 1 1 C U 19 1_555 C G 26 1_555 3.234 -0.688 0.009 5.252 -14.336 13.300 12 R_U77:G84_R R 77 ? R 84 ? 28 ? 1 C G 20 1_555 C C 25 1_555 -0.354 -0.180 0.816 12.608 20.543 9.523 13 R_G78:C83_R R 78 ? R 83 ? 19 1 1 C G 21 1_555 C A 24 1_555 7.010 -5.762 0.340 35.543 19.154 -16.297 14 R_G79:A82_R R 79 ? R 82 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C G 1 1_555 C C 46 1_555 C G 2 1_555 C C 45 1_555 0.155 -2.053 3.049 0.499 7.615 30.561 -5.006 -0.206 2.480 14.172 -0.929 31.478 1 RR_G59G60:C103C104_RR R 59 ? R 104 ? R 60 ? R 103 ? 1 C G 2 1_555 C C 45 1_555 C A 3 1_555 C U 44 1_555 0.249 -1.616 3.133 2.970 6.298 34.663 -3.517 -0.007 2.817 10.441 -4.923 35.334 2 RR_G60A61:U102C103_RR R 60 ? R 103 ? R 61 ? R 102 ? 1 C A 3 1_555 C U 44 1_555 C C 4 1_555 C G 43 1_555 0.883 -2.617 3.071 2.233 -1.509 24.241 -5.734 -1.410 3.291 -3.578 -5.296 24.388 3 RR_A61C62:G101U102_RR R 61 ? R 102 ? R 62 ? R 101 ? 1 C C 4 1_555 C G 43 1_555 C U 5 1_555 C A 42 1_555 -0.943 -2.277 3.174 -3.430 10.793 32.554 -5.325 1.124 2.404 18.567 5.900 34.417 4 RR_C62U63:A100G101_RR R 62 ? R 101 ? R 63 ? R 100 ? 1 C U 5 1_555 C A 42 1_555 C C 6 1_555 C G 41 1_555 0.261 -1.878 3.275 -1.962 2.777 31.442 -3.948 -0.833 3.080 5.106 3.608 31.620 5 RR_U63C64:G99A100_RR R 63 ? R 100 ? R 64 ? R 99 ? 1 C G 15 1_555 C C 30 1_555 C C 16 1_555 C G 29 1_555 0.267 -1.435 3.116 2.572 0.112 35.822 -2.342 -0.082 3.123 0.181 -4.174 35.911 6 RR_G73C74:G87C88_RR R 73 ? R 88 ? R 74 ? R 87 ? 1 C C 16 1_555 C G 29 1_555 C U 17 1_555 C A 28 1_555 -0.512 -0.674 3.397 -0.750 5.399 29.586 -2.430 0.830 3.237 10.460 1.453 30.072 7 RR_C74U75:A86G87_RR R 74 ? R 87 ? R 75 ? R 86 ? 1 C U 17 1_555 C A 28 1_555 C U 18 1_555 C A 27 1_555 0.191 -0.864 3.255 -0.411 7.150 31.080 -2.832 -0.421 2.985 13.127 0.754 31.874 8 RR_U75U76:A85A86_RR R 75 ? R 86 ? R 76 ? R 85 ? 1 C U 18 1_555 C A 27 1_555 C U 19 1_555 C G 26 1_555 0.921 -1.490 3.494 3.657 5.250 46.151 -2.349 -0.841 3.374 6.660 -4.638 46.569 9 RR_U76U77:G84A85_RR R 76 ? R 85 ? R 77 ? R 84 ? 1 C U 19 1_555 C G 26 1_555 C G 20 1_555 C C 25 1_555 -0.736 -3.263 2.396 -6.575 9.648 10.956 -14.774 0.568 -0.017 38.808 26.449 15.997 10 RR_U77G78:C83G84_RR R 77 ? R 84 ? R 78 ? R 83 ? 1 C G 20 1_555 C C 25 1_555 C G 21 1_555 C A 24 1_555 -2.498 -0.739 2.712 5.813 1.272 56.066 -0.840 2.904 2.447 1.349 -6.165 56.355 11 RR_G78G79:A82C83_RR R 78 ? R 83 ? R 79 ? R 82 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'ZINC ION' ZN 5 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN 1 141 1 ZN ZN B . E 4 ZN 1 142 2 ZN ZN B . F 4 ZN 1 143 3 ZN ZN B . G 5 HOH 1 159 7 HOH HOH A . G 5 HOH 2 160 11 HOH HOH A . G 5 HOH 3 161 13 HOH HOH A . G 5 HOH 4 162 17 HOH HOH A . G 5 HOH 5 163 18 HOH HOH A . G 5 HOH 6 164 23 HOH HOH A . G 5 HOH 7 165 24 HOH HOH A . G 5 HOH 8 166 25 HOH HOH A . G 5 HOH 9 167 26 HOH HOH A . G 5 HOH 10 168 27 HOH HOH A . G 5 HOH 11 169 28 HOH HOH A . G 5 HOH 12 170 29 HOH HOH A . G 5 HOH 13 171 32 HOH HOH A . G 5 HOH 14 172 33 HOH HOH A . G 5 HOH 15 173 34 HOH HOH A . G 5 HOH 16 174 35 HOH HOH A . H 5 HOH 1 144 1 HOH HOH B . H 5 HOH 2 145 3 HOH HOH B . H 5 HOH 3 146 5 HOH HOH B . H 5 HOH 4 147 6 HOH HOH B . H 5 HOH 5 148 12 HOH HOH B . H 5 HOH 6 149 14 HOH HOH B . H 5 HOH 7 150 16 HOH HOH B . H 5 HOH 8 151 30 HOH HOH B . H 5 HOH 9 152 31 HOH HOH B . H 5 HOH 10 153 36 HOH HOH B . H 5 HOH 11 154 37 HOH HOH B . H 5 HOH 12 155 38 HOH HOH B . H 5 HOH 13 156 39 HOH HOH B . H 5 HOH 14 157 40 HOH HOH B . H 5 HOH 15 158 45 HOH HOH B . H 5 HOH 16 159 46 HOH HOH B . H 5 HOH 17 160 49 HOH HOH B . I 5 HOH 1 2 2 HOH HOH R . I 5 HOH 2 4 4 HOH HOH R . I 5 HOH 3 8 8 HOH HOH R . I 5 HOH 4 9 9 HOH HOH R . I 5 HOH 5 10 10 HOH HOH R . I 5 HOH 6 15 15 HOH HOH R . I 5 HOH 7 19 19 HOH HOH R . I 5 HOH 8 20 20 HOH HOH R . I 5 HOH 9 21 21 HOH HOH R . I 5 HOH 10 22 22 HOH HOH R . I 5 HOH 11 41 41 HOH HOH R . I 5 HOH 12 42 42 HOH HOH R . I 5 HOH 13 43 43 HOH HOH R . I 5 HOH 14 44 44 HOH HOH R . I 5 HOH 15 47 47 HOH HOH R . I 5 HOH 16 48 48 HOH HOH R . I 5 HOH 17 50 50 HOH HOH R . #