HEADER HYDROLASE 15-JUL-09 3IB7 TITLE CRYSTAL STRUCTURE OF FULL LENGTH RV0805 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ICC PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: RV0805 PHOSPHODIESTERASE PROTEIN; COMPND 5 EC: 3.1.4.17; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 STRAIN: H37RV; SOURCE 5 GENE: RV0805; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PPROEXHTC KEYWDS METALLOPHOSPHOESTERASE, ALPHA-BETA FOLD, SWAPPED-DIMER, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.PODOBNIK,U.DERMOL REVDAT 5 01-NOV-23 3IB7 1 REMARK SEQADV LINK REVDAT 4 01-NOV-17 3IB7 1 REMARK REVDAT 3 13-JUL-11 3IB7 1 VERSN REVDAT 2 08-DEC-09 3IB7 1 JRNL REVDAT 1 29-SEP-09 3IB7 0 JRNL AUTH M.PODOBNIK,R.TYAGI,N.MATANGE,U.DERMOL,A.K.GUPTA,R.MATTOO, JRNL AUTH 2 K.SESHADRI,S.S.VISWESWARIAH JRNL TITL A MYCOBACTERIAL CYCLIC AMP PHOSPHODIESTERASE THAT MOONLIGHTS JRNL TITL 2 AS A MODIFIER OF CELL WALL PERMEABILITY JRNL REF J.BIOL.CHEM. V. 284 32846 2009 JRNL REFN ISSN 0021-9258 JRNL PMID 19801656 JRNL DOI 10.1074/JBC.M109.049635 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.R.SHENOY,M.CAPUDER,P.DRASKOVIC,D.LAMBA,S.S.VISWESWARIAH, REMARK 1 AUTH 2 M.PODOBNIK REMARK 1 TITL STRUCTURAL AND BIOCHEMICAL ANALYSIS OF THE RV0805 CYCLIC REMARK 1 TITL 2 NUCLEOTIDE PHOSPHODIESTERASE FROM MYCOBACTERIUM TUBERCULOSIS REMARK 1 REF J.MOL.BIOL. V. 365 211 2007 REMARK 1 REFN ISSN 0022-2836 REMARK 1 PMID 17059828 REMARK 1 DOI 10.1016/J.JMB.2006.10.005 REMARK 1 REFERENCE 2 REMARK 1 AUTH A.R.SHENOY,N.SREENATH,M.PODOBNIK,M.KOVACEVIC, REMARK 1 AUTH 2 S.S.VISWESWARIAH REMARK 1 TITL THE RV0805 GENE FROM MYCOBACTERIUM TUBERCULOSIS ENCODES A REMARK 1 TITL 2 3',5'-CYCLIC NUCLEOTIDE PHOSPHODIESTERASE: BIOCHEMICAL AND REMARK 1 TITL 3 MUTATIONAL ANALYSIS REMARK 1 REF BIOCHEMISTRY V. 44 15695 2005 REMARK 1 REFN ISSN 0006-2960 REMARK 1 PMID 16313172 REMARK 1 DOI 10.1021/BI0512391 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 54293 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.161 REMARK 3 R VALUE (WORKING SET) : 0.159 REMARK 3 FREE R VALUE : 0.177 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.100 REMARK 3 FREE R VALUE TEST SET COUNT : 5463 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3505 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.11 REMARK 3 BIN R VALUE (WORKING SET) : 0.3110 REMARK 3 BIN FREE R VALUE SET COUNT : 412 REMARK 3 BIN FREE R VALUE : 0.3310 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2229 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 40 REMARK 3 SOLVENT ATOMS : 292 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 26.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.76000 REMARK 3 B22 (A**2) : -0.76000 REMARK 3 B33 (A**2) : 1.51000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.068 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.067 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.043 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.262 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.972 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.966 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2308 ; 0.008 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3141 ; 1.162 ; 1.984 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 294 ; 5.413 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 100 ;33.926 ;22.700 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 354 ;10.942 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ;10.823 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 360 ; 0.078 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1759 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1041 ; 0.193 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1597 ; 0.298 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 226 ; 0.096 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 76 ; 0.128 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 36 ; 0.082 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1508 ; 0.382 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2354 ; 0.629 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 875 ; 1.226 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 787 ; 2.012 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 20 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 27 REMARK 3 ORIGIN FOR THE GROUP (A): 33.6041 28.9384 12.0431 REMARK 3 T TENSOR REMARK 3 T11: -0.0989 T22: -0.1405 REMARK 3 T33: -0.1201 T12: -0.0003 REMARK 3 T13: 0.0207 T23: -0.0126 REMARK 3 L TENSOR REMARK 3 L11: 3.9195 L22: 0.4232 REMARK 3 L33: 1.4811 L12: 0.2358 REMARK 3 L13: -1.6648 L23: -0.1883 REMARK 3 S TENSOR REMARK 3 S11: 0.0901 S12: -0.1060 S13: 0.2638 REMARK 3 S21: 0.1188 S22: 0.0436 S23: 0.0467 REMARK 3 S31: -0.0970 S32: -0.0650 S33: -0.1337 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 28 A 32 REMARK 3 ORIGIN FOR THE GROUP (A): 59.8776 31.3109 -1.1155 REMARK 3 T TENSOR REMARK 3 T11: -0.1143 T22: -0.1128 REMARK 3 T33: -0.0259 T12: -0.0049 REMARK 3 T13: 0.0201 T23: -0.0478 REMARK 3 L TENSOR REMARK 3 L11: 17.9001 L22: 3.3938 REMARK 3 L33: 7.9814 L12: -0.0075 REMARK 3 L13: 6.1566 L23: -0.3743 REMARK 3 S TENSOR REMARK 3 S11: -0.1120 S12: -0.6468 S13: 0.7425 REMARK 3 S21: 0.1171 S22: 0.0441 S23: -0.3458 REMARK 3 S31: -0.4548 S32: 0.0419 S33: 0.0679 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 33 A 50 REMARK 3 ORIGIN FOR THE GROUP (A): 50.0651 35.2614 9.0086 REMARK 3 T TENSOR REMARK 3 T11: -0.1133 T22: -0.0723 REMARK 3 T33: -0.0588 T12: -0.0133 REMARK 3 T13: -0.0182 T23: -0.0438 REMARK 3 L TENSOR REMARK 3 L11: 10.9667 L22: 1.7209 REMARK 3 L33: 13.4978 L12: -1.9068 REMARK 3 L13: -12.0797 L23: 1.8337 REMARK 3 S TENSOR REMARK 3 S11: 0.1290 S12: -0.5574 S13: 0.4719 REMARK 3 S21: 0.1349 S22: 0.1966 S23: -0.2347 REMARK 3 S31: -0.2593 S32: 0.5795 S33: -0.3256 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 51 A 58 REMARK 3 ORIGIN FOR THE GROUP (A): 38.3069 28.6689 18.3917 REMARK 3 T TENSOR REMARK 3 T11: -0.0136 T22: -0.0323 REMARK 3 T33: -0.0733 T12: -0.0066 REMARK 3 T13: 0.0139 T23: -0.0276 REMARK 3 L TENSOR REMARK 3 L11: 2.4452 L22: 11.4587 REMARK 3 L33: 0.2112 L12: 5.0562 REMARK 3 L13: -0.5119 L23: -1.3816 REMARK 3 S TENSOR REMARK 3 S11: 0.1292 S12: -0.3711 S13: 0.4609 REMARK 3 S21: 0.7371 S22: -0.0882 S23: 0.2911 REMARK 3 S31: -0.1388 S32: 0.0874 S33: -0.0410 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 59 A 85 REMARK 3 ORIGIN FOR THE GROUP (A): 52.4302 22.6274 9.1290 REMARK 3 T TENSOR REMARK 3 T11: -0.1065 T22: -0.0719 REMARK 3 T33: -0.0987 T12: 0.0070 REMARK 3 T13: -0.0020 T23: -0.0102 REMARK 3 L TENSOR REMARK 3 L11: 2.7066 L22: 1.2770 REMARK 3 L33: 1.4506 L12: -0.6382 REMARK 3 L13: -0.9799 L23: 0.6813 REMARK 3 S TENSOR REMARK 3 S11: -0.0627 S12: -0.4728 S13: -0.0024 REMARK 3 S21: 0.1847 S22: 0.0904 S23: -0.1225 REMARK 3 S31: 0.0399 S32: 0.2611 S33: -0.0277 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 86 A 100 REMARK 3 ORIGIN FOR THE GROUP (A): 46.4239 19.9796 9.3215 REMARK 3 T TENSOR REMARK 3 T11: -0.1257 T22: -0.0877 REMARK 3 T33: -0.1006 T12: 0.0217 REMARK 3 T13: -0.0191 T23: -0.0113 REMARK 3 L TENSOR REMARK 3 L11: 3.0781 L22: 2.4688 REMARK 3 L33: 6.1383 L12: -0.9140 REMARK 3 L13: -2.5523 L23: 1.4295 REMARK 3 S TENSOR REMARK 3 S11: -0.0938 S12: -0.4150 S13: 0.1061 REMARK 3 S21: 0.2920 S22: 0.1101 S23: -0.1500 REMARK 3 S31: 0.0892 S32: 0.1974 S33: -0.0164 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 101 A 119 REMARK 3 ORIGIN FOR THE GROUP (A): 52.4911 10.1996 7.6499 REMARK 3 T TENSOR REMARK 3 T11: -0.0616 T22: -0.0630 REMARK 3 T33: -0.0031 T12: 0.0439 REMARK 3 T13: -0.0011 T23: 0.0434 REMARK 3 L TENSOR REMARK 3 L11: 7.7160 L22: 5.2440 REMARK 3 L33: 3.3781 L12: 1.3760 REMARK 3 L13: 3.6397 L23: 0.4245 REMARK 3 S TENSOR REMARK 3 S11: -0.1130 S12: -0.3297 S13: -0.1546 REMARK 3 S21: 0.3771 S22: -0.0732 S23: -0.5466 REMARK 3 S31: 0.1304 S32: 0.2151 S33: 0.1861 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 120 A 124 REMARK 3 ORIGIN FOR THE GROUP (A): 37.4869 11.8163 14.2615 REMARK 3 T TENSOR REMARK 3 T11: -0.0824 T22: -0.0346 REMARK 3 T33: -0.0330 T12: -0.0111 REMARK 3 T13: 0.0298 T23: 0.0008 REMARK 3 L TENSOR REMARK 3 L11: 11.1324 L22: 3.6670 REMARK 3 L33: 22.1574 L12: -6.3893 REMARK 3 L13: -15.7056 L23: 9.0140 REMARK 3 S TENSOR REMARK 3 S11: 0.2640 S12: -0.5273 S13: 0.5721 REMARK 3 S21: 0.0061 S22: 0.2457 S23: -0.3505 REMARK 3 S31: -0.1732 S32: 0.9403 S33: -0.5096 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 125 A 141 REMARK 3 ORIGIN FOR THE GROUP (A): 41.1098 13.0704 2.2173 REMARK 3 T TENSOR REMARK 3 T11: -0.1420 T22: -0.1427 REMARK 3 T33: -0.0868 T12: 0.0052 REMARK 3 T13: 0.0198 T23: -0.0190 REMARK 3 L TENSOR REMARK 3 L11: 3.5379 L22: 0.7329 REMARK 3 L33: 3.7606 L12: 0.8219 REMARK 3 L13: -3.3263 L23: -0.8014 REMARK 3 S TENSOR REMARK 3 S11: -0.0253 S12: 0.0358 S13: -0.0674 REMARK 3 S21: 0.0172 S22: 0.0405 S23: -0.0951 REMARK 3 S31: 0.0859 S32: 0.0767 S33: -0.0152 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 142 A 147 REMARK 3 ORIGIN FOR THE GROUP (A): 40.9103 6.1215 -4.5517 REMARK 3 T TENSOR REMARK 3 T11: -0.0425 T22: -0.1020 REMARK 3 T33: 0.0190 T12: -0.0343 REMARK 3 T13: 0.0383 T23: -0.0113 REMARK 3 L TENSOR REMARK 3 L11: 3.3633 L22: 30.9573 REMARK 3 L33: 10.6616 L12: 8.3559 REMARK 3 L13: -5.9116 L23: -16.3495 REMARK 3 S TENSOR REMARK 3 S11: -0.4149 S12: 0.1060 S13: -0.5809 REMARK 3 S21: -0.6110 S22: -0.2816 S23: -1.3285 REMARK 3 S31: 0.5509 S32: 0.4190 S33: 0.6965 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 148 A 158 REMARK 3 ORIGIN FOR THE GROUP (A): 32.9188 4.4663 4.7200 REMARK 3 T TENSOR REMARK 3 T11: -0.0903 T22: -0.1338 REMARK 3 T33: -0.0756 T12: -0.0059 REMARK 3 T13: 0.0232 T23: -0.0031 REMARK 3 L TENSOR REMARK 3 L11: 6.1541 L22: 0.5294 REMARK 3 L33: 6.4034 L12: -0.4350 REMARK 3 L13: -6.2416 L23: 0.6320 REMARK 3 S TENSOR REMARK 3 S11: -0.0892 S12: 0.0719 S13: -0.1280 REMARK 3 S21: 0.0183 S22: 0.0575 S23: -0.1181 REMARK 3 S31: 0.1592 S32: -0.0049 S33: 0.0316 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 159 A 177 REMARK 3 ORIGIN FOR THE GROUP (A): 33.7312 18.3867 0.8871 REMARK 3 T TENSOR REMARK 3 T11: -0.1329 T22: -0.1396 REMARK 3 T33: -0.1149 T12: -0.0004 REMARK 3 T13: 0.0242 T23: -0.0041 REMARK 3 L TENSOR REMARK 3 L11: 0.8265 L22: 0.7152 REMARK 3 L33: 0.7240 L12: 0.4471 REMARK 3 L13: -0.6702 L23: -0.2780 REMARK 3 S TENSOR REMARK 3 S11: 0.0568 S12: 0.0560 S13: 0.0025 REMARK 3 S21: 0.0611 S22: 0.0264 S23: 0.0599 REMARK 3 S31: -0.1149 S32: -0.0608 S33: -0.0832 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 178 A 191 REMARK 3 ORIGIN FOR THE GROUP (A): 38.4115 16.3084 -11.5535 REMARK 3 T TENSOR REMARK 3 T11: -0.1144 T22: -0.0809 REMARK 3 T33: -0.1130 T12: 0.0057 REMARK 3 T13: 0.0103 T23: -0.0246 REMARK 3 L TENSOR REMARK 3 L11: 4.8958 L22: 7.5605 REMARK 3 L33: 4.3956 L12: 4.5060 REMARK 3 L13: -3.9106 L23: -3.9928 REMARK 3 S TENSOR REMARK 3 S11: -0.0293 S12: 0.2071 S13: -0.2338 REMARK 3 S21: -0.3377 S22: -0.1186 S23: -0.1692 REMARK 3 S31: 0.2000 S32: 0.0470 S33: 0.1480 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 192 A 197 REMARK 3 ORIGIN FOR THE GROUP (A): 26.4691 8.8330 -2.8664 REMARK 3 T TENSOR REMARK 3 T11: -0.1007 T22: -0.0846 REMARK 3 T33: -0.0741 T12: -0.0321 REMARK 3 T13: 0.0273 T23: -0.0496 REMARK 3 L TENSOR REMARK 3 L11: 15.7986 L22: 6.8088 REMARK 3 L33: 21.7540 L12: 2.6764 REMARK 3 L13: -10.1001 L23: -1.6809 REMARK 3 S TENSOR REMARK 3 S11: -0.2365 S12: 0.9789 S13: -0.3864 REMARK 3 S21: -0.3630 S22: -0.0016 S23: 0.0553 REMARK 3 S31: 0.5212 S32: -1.0636 S33: 0.2382 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 198 A 239 REMARK 3 ORIGIN FOR THE GROUP (A): 36.1063 25.7129 -3.0993 REMARK 3 T TENSOR REMARK 3 T11: -0.1370 T22: -0.1344 REMARK 3 T33: -0.1379 T12: -0.0001 REMARK 3 T13: 0.0055 T23: -0.0081 REMARK 3 L TENSOR REMARK 3 L11: 1.6362 L22: 1.1829 REMARK 3 L33: 0.4090 L12: 0.3335 REMARK 3 L13: -0.2677 L23: 0.1109 REMARK 3 S TENSOR REMARK 3 S11: -0.0314 S12: 0.1330 S13: 0.0746 REMARK 3 S21: -0.0783 S22: 0.0265 S23: 0.0738 REMARK 3 S31: 0.0150 S32: -0.0123 S33: 0.0050 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 240 A 266 REMARK 3 ORIGIN FOR THE GROUP (A): 35.6298 31.5034 4.6151 REMARK 3 T TENSOR REMARK 3 T11: -0.1473 T22: -0.1540 REMARK 3 T33: -0.1367 T12: 0.0059 REMARK 3 T13: 0.0046 T23: -0.0077 REMARK 3 L TENSOR REMARK 3 L11: 3.5286 L22: 1.8761 REMARK 3 L33: 2.1777 L12: 1.3534 REMARK 3 L13: -2.1236 L23: -1.0611 REMARK 3 S TENSOR REMARK 3 S11: 0.0277 S12: -0.0478 S13: 0.1010 REMARK 3 S21: 0.0724 S22: 0.0157 S23: 0.0395 REMARK 3 S31: -0.0246 S32: -0.0037 S33: -0.0435 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 267 A 275 REMARK 3 ORIGIN FOR THE GROUP (A): 36.9512 50.5499 10.5767 REMARK 3 T TENSOR REMARK 3 T11: -0.0721 T22: -0.0447 REMARK 3 T33: -0.0503 T12: -0.0325 REMARK 3 T13: -0.0115 T23: -0.0859 REMARK 3 L TENSOR REMARK 3 L11: 5.8225 L22: 9.7712 REMARK 3 L33: 9.7725 L12: -3.6985 REMARK 3 L13: -1.8636 L23: -5.2821 REMARK 3 S TENSOR REMARK 3 S11: 0.0881 S12: -0.6948 S13: 0.4296 REMARK 3 S21: 0.4635 S22: 0.3308 S23: -0.3826 REMARK 3 S31: -0.4383 S32: 0.1506 S33: -0.4189 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 276 A 283 REMARK 3 ORIGIN FOR THE GROUP (A): 28.7299 46.7922 22.7916 REMARK 3 T TENSOR REMARK 3 T11: 0.0336 T22: 0.0232 REMARK 3 T33: -0.0598 T12: 0.0097 REMARK 3 T13: -0.0276 T23: -0.0764 REMARK 3 L TENSOR REMARK 3 L11: 27.8297 L22: 3.2496 REMARK 3 L33: 17.7555 L12: 6.1943 REMARK 3 L13: -10.5613 L23: -2.3382 REMARK 3 S TENSOR REMARK 3 S11: 0.3265 S12: -1.3494 S13: 0.8111 REMARK 3 S21: 0.4264 S22: -0.1718 S23: 0.0656 REMARK 3 S31: -0.3328 S32: 0.5896 S33: -0.1547 REMARK 3 REMARK 3 TLS GROUP : 19 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 284 A 289 REMARK 3 ORIGIN FOR THE GROUP (A): 19.8826 46.6661 21.9302 REMARK 3 T TENSOR REMARK 3 T11: 0.0081 T22: -0.0215 REMARK 3 T33: 0.0064 T12: 0.0272 REMARK 3 T13: 0.0396 T23: -0.0723 REMARK 3 L TENSOR REMARK 3 L11: 58.8057 L22: 7.3730 REMARK 3 L33: 3.5526 L12: 3.9911 REMARK 3 L13: -9.5079 L23: -1.1446 REMARK 3 S TENSOR REMARK 3 S11: 0.0285 S12: -1.0448 S13: 1.7358 REMARK 3 S21: 0.5524 S22: -0.0128 S23: 0.6790 REMARK 3 S31: -0.2536 S32: -0.0209 S33: -0.0157 REMARK 3 REMARK 3 TLS GROUP : 20 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 290 A 298 REMARK 3 ORIGIN FOR THE GROUP (A): 22.0207 30.1368 22.9115 REMARK 3 T TENSOR REMARK 3 T11: 0.2694 T22: 0.0407 REMARK 3 T33: -0.0588 T12: 0.0976 REMARK 3 T13: 0.1028 T23: 0.0266 REMARK 3 L TENSOR REMARK 3 L11: 16.5999 L22: 54.8300 REMARK 3 L33: 0.3455 L12: -28.2342 REMARK 3 L13: -0.9650 L23: 3.0449 REMARK 3 S TENSOR REMARK 3 S11: -0.8067 S12: -0.8089 S13: -0.3097 REMARK 3 S21: 2.0239 S22: 0.8986 S23: 0.4452 REMARK 3 S31: 0.4044 S32: -0.2218 S33: -0.0919 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3IB7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-JUL-09. REMARK 100 THE DEPOSITION ID IS D_1000054194. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-NOV-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : BW7A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.008 REMARK 200 MONOCHROMATOR : FIXED EXIT DOUBLE CRYSTAL (SI), REMARK 200 HORIZONTALLY FOCUSSING REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54354 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 9.400 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.52800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 1.3 REMARK 200 STARTING MODEL: PDB ENTRY 2HY1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.83 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: BIS-TRIS, AMM. ACETATE, MPD, PH 6.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.12400 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 50.08900 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 50.08900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 20.06200 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 50.08900 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 50.08900 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 60.18600 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 50.08900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 50.08900 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 20.06200 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 50.08900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 50.08900 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 60.18600 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 40.12400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -114.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -11 REMARK 465 ALA A -10 REMARK 465 MET A -9 REMARK 465 GLY A -8 REMARK 465 ILE A -7 REMARK 465 ARG A -6 REMARK 465 ASN A -5 REMARK 465 SER A -4 REMARK 465 LYS A -3 REMARK 465 ALA A -2 REMARK 465 TYR A -1 REMARK 465 VAL A 0 REMARK 465 GLU A 1 REMARK 465 HIS A 2 REMARK 465 ARG A 3 REMARK 465 SER A 299 REMARK 465 LEU A 300 REMARK 465 PHE A 301 REMARK 465 LYS A 302 REMARK 465 HIS A 303 REMARK 465 PRO A 304 REMARK 465 PRO A 305 REMARK 465 MET A 306 REMARK 465 VAL A 307 REMARK 465 LEU A 308 REMARK 465 THR A 309 REMARK 465 SER A 310 REMARK 465 SER A 311 REMARK 465 ALA A 312 REMARK 465 PRO A 313 REMARK 465 ARG A 314 REMARK 465 SER A 315 REMARK 465 PRO A 316 REMARK 465 VAL A 317 REMARK 465 ASP A 318 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 61 47.67 -85.55 REMARK 500 ASP A 125 -118.17 49.32 REMARK 500 HIS A 169 -62.39 -93.07 REMARK 500 HIS A 207 -38.53 77.04 REMARK 500 ALA A 214 -166.63 -161.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 444 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 21 OD1 REMARK 620 2 HIS A 23 NE2 106.6 REMARK 620 3 ASP A 63 OD2 89.5 91.8 REMARK 620 4 HIS A 209 NE2 87.9 94.1 174.0 REMARK 620 5 HOH A 470 O 87.4 164.4 81.2 93.2 REMARK 620 6 ACT A 666 O 165.6 86.5 83.9 97.3 78.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 555 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 63 OD2 REMARK 620 2 ASN A 97 OD1 99.5 REMARK 620 3 HOH A 470 O 77.5 168.9 REMARK 620 4 ACT A 666 OXT 87.1 90.8 78.4 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE A 444 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 555 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 666 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BTB A 777 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 778 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 779 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 1000 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2HY1 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RV0805 CATALYTIC CORE REMARK 900 RELATED ID: 2HYP RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RV0805 CATALYTIC CORE D66A MUTANT REMARK 900 RELATED ID: 2HYO RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RV0805 CATALYTIC CORE N97A MUTANT REMARK 900 RELATED ID: 3IB8 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF FULL LENGTH RV0805 IN COMPLEX WITH 5'-AMP DBREF 3IB7 A 2 318 UNP O06629 O06629_MYCTU 2 318 SEQADV 3IB7 GLY A -11 UNP O06629 EXPRESSION TAG SEQADV 3IB7 ALA A -10 UNP O06629 EXPRESSION TAG SEQADV 3IB7 MET A -9 UNP O06629 EXPRESSION TAG SEQADV 3IB7 GLY A -8 UNP O06629 EXPRESSION TAG SEQADV 3IB7 ILE A -7 UNP O06629 EXPRESSION TAG SEQADV 3IB7 ARG A -6 UNP O06629 EXPRESSION TAG SEQADV 3IB7 ASN A -5 UNP O06629 EXPRESSION TAG SEQADV 3IB7 SER A -4 UNP O06629 EXPRESSION TAG SEQADV 3IB7 LYS A -3 UNP O06629 EXPRESSION TAG SEQADV 3IB7 ALA A -2 UNP O06629 EXPRESSION TAG SEQADV 3IB7 TYR A -1 UNP O06629 EXPRESSION TAG SEQADV 3IB7 VAL A 0 UNP O06629 EXPRESSION TAG SEQADV 3IB7 GLU A 1 UNP O06629 EXPRESSION TAG SEQRES 1 A 330 GLY ALA MET GLY ILE ARG ASN SER LYS ALA TYR VAL GLU SEQRES 2 A 330 HIS ARG LEU ARG ALA ALA GLU HIS PRO ARG PRO ASP TYR SEQRES 3 A 330 VAL LEU LEU HIS ILE SER ASP THR HIS LEU ILE GLY GLY SEQRES 4 A 330 ASP ARG ARG LEU TYR GLY ALA VAL ASP ALA ASP ASP ARG SEQRES 5 A 330 LEU GLY GLU LEU LEU GLU GLN LEU ASN GLN SER GLY LEU SEQRES 6 A 330 ARG PRO ASP ALA ILE VAL PHE THR GLY ASP LEU ALA ASP SEQRES 7 A 330 LYS GLY GLU PRO ALA ALA TYR ARG LYS LEU ARG GLY LEU SEQRES 8 A 330 VAL GLU PRO PHE ALA ALA GLN LEU GLY ALA GLU LEU VAL SEQRES 9 A 330 TRP VAL MET GLY ASN HIS ASP ASP ARG ALA GLU LEU ARG SEQRES 10 A 330 LYS PHE LEU LEU ASP GLU ALA PRO SER MET ALA PRO LEU SEQRES 11 A 330 ASP ARG VAL CYS MET ILE ASP GLY LEU ARG ILE ILE VAL SEQRES 12 A 330 LEU ASP THR SER VAL PRO GLY HIS HIS HIS GLY GLU ILE SEQRES 13 A 330 ARG ALA SER GLN LEU GLY TRP LEU ALA GLU GLU LEU ALA SEQRES 14 A 330 THR PRO ALA PRO ASP GLY THR ILE LEU ALA LEU HIS HIS SEQRES 15 A 330 PRO PRO ILE PRO SER VAL LEU ASP MET ALA VAL THR VAL SEQRES 16 A 330 GLU LEU ARG ASP GLN ALA ALA LEU GLY ARG VAL LEU ARG SEQRES 17 A 330 GLY THR ASP VAL ARG ALA ILE LEU ALA GLY HIS LEU HIS SEQRES 18 A 330 TYR SER THR ASN ALA THR PHE VAL GLY ILE PRO VAL SER SEQRES 19 A 330 VAL ALA SER ALA THR CYS TYR THR GLN ASP LEU THR VAL SEQRES 20 A 330 ALA ALA GLY GLY THR ARG GLY ARG ASP GLY ALA GLN GLY SEQRES 21 A 330 CYS ASN LEU VAL HIS VAL TYR PRO ASP THR VAL VAL HIS SEQRES 22 A 330 SER VAL ILE PRO LEU GLY GLY GLY GLU THR VAL GLY THR SEQRES 23 A 330 PHE VAL SER PRO GLY GLN ALA ARG ARG LYS ILE ALA GLU SEQRES 24 A 330 SER GLY ILE PHE ILE GLU PRO SER ARG ARG ASP SER LEU SEQRES 25 A 330 PHE LYS HIS PRO PRO MET VAL LEU THR SER SER ALA PRO SEQRES 26 A 330 ARG SER PRO VAL ASP HET FE A 444 1 HET MN A 555 1 HET ACT A 666 4 HET BTB A 777 14 HET MPD A 778 8 HET MPD A 779 8 HET ACT A1000 4 HETNAM FE FE (III) ION HETNAM MN MANGANESE (II) ION HETNAM ACT ACETATE ION HETNAM BTB 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL- HETNAM 2 BTB PROPANE-1,3-DIOL HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETSYN BTB BIS-TRIS BUFFER FORMUL 2 FE FE 3+ FORMUL 3 MN MN 2+ FORMUL 4 ACT 2(C2 H3 O2 1-) FORMUL 5 BTB C8 H19 N O5 FORMUL 6 MPD 2(C6 H14 O2) FORMUL 9 HOH *292(H2 O) HELIX 1 1 ARG A 30 ALA A 34 5 5 HELIX 2 2 ASP A 36 GLY A 52 1 17 HELIX 3 3 GLU A 69 GLY A 88 1 20 HELIX 4 4 ASP A 100 ASP A 110 1 11 HELIX 5 5 ARG A 145 LEU A 156 1 12 HELIX 6 6 LEU A 177 GLU A 184 5 8 HELIX 7 7 ASP A 187 ARG A 196 1 10 HELIX 8 8 SER A 277 SER A 288 1 12 SHEET 1 A 2 ARG A 5 ALA A 6 0 SHEET 2 A 2 ILE A 290 PHE A 291 1 O PHE A 291 N ARG A 5 SHEET 1 B 5 GLU A 90 TRP A 93 0 SHEET 2 B 5 ALA A 57 PHE A 60 1 N ILE A 58 O VAL A 92 SHEET 3 B 5 TYR A 14 ILE A 19 1 N LEU A 17 O VAL A 59 SHEET 4 B 5 GLY A 248 VAL A 254 -1 O VAL A 252 N LEU A 16 SHEET 5 B 5 VAL A 259 PRO A 265 -1 O ILE A 264 N CYS A 249 SHEET 1 C 6 ARG A 120 ILE A 124 0 SHEET 2 C 6 LEU A 127 VAL A 131 -1 O VAL A 131 N ARG A 120 SHEET 3 C 6 THR A 164 ALA A 167 1 O ALA A 167 N ILE A 130 SHEET 4 C 6 VAL A 200 ALA A 205 1 O ARG A 201 N THR A 164 SHEET 5 C 6 ILE A 219 VAL A 223 1 O SER A 222 N ILE A 203 SHEET 6 C 6 THR A 212 PHE A 216 -1 N ALA A 214 O VAL A 221 SHEET 1 D 2 THR A 230 GLN A 231 0 SHEET 2 D 2 GLY A 242 ARG A 243 -1 O ARG A 243 N THR A 230 LINK OD1 ASP A 21 FE FE A 444 1555 1555 2.12 LINK NE2 HIS A 23 FE FE A 444 1555 1555 2.21 LINK OD2 ASP A 63 FE FE A 444 1555 1555 2.27 LINK OD2 ASP A 63 MN MN A 555 1555 1555 2.23 LINK OD1 ASN A 97 MN MN A 555 1555 1555 2.18 LINK NE2 HIS A 209 FE FE A 444 1555 1555 2.25 LINK FE FE A 444 O HOH A 470 1555 1555 2.01 LINK FE FE A 444 O ACT A 666 1555 1555 2.28 LINK O HOH A 470 MN MN A 555 1555 1555 2.22 LINK MN MN A 555 OXT ACT A 666 1555 1555 2.25 SITE 1 AC1 7 ASP A 21 HIS A 23 ASP A 63 HIS A 209 SITE 2 AC1 7 HOH A 470 MN A 555 ACT A 666 SITE 1 AC2 7 ASP A 63 ASN A 97 HIS A 169 HIS A 207 SITE 2 AC2 7 FE A 444 HOH A 470 ACT A 666 SITE 1 AC3 10 HIS A 23 ASP A 63 ASN A 97 HIS A 98 SITE 2 AC3 10 HIS A 207 HIS A 209 HOH A 354 FE A 444 SITE 3 AC3 10 HOH A 470 MN A 555 SITE 1 AC4 11 ASP A 66 LYS A 67 ASN A 97 HIS A 98 SITE 2 AC4 11 ASP A 99 PRO A 137 GLY A 138 HIS A 140 SITE 3 AC4 11 GLU A 155 HOH A 362 HOH A 390 SITE 1 AC5 5 PRO A 117 ASP A 119 GLN A 148 TRP A 151 SITE 2 AC5 5 HOH A 377 SITE 1 AC6 3 VAL A 92 TRP A 93 ARG A 120 SITE 1 AC7 2 ALA A 160 HOH A 461 CRYST1 100.178 100.178 80.248 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009982 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009982 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012461 0.00000