data_3IBP # _entry.id 3IBP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3IBP RCSB RCSB054212 WWPDB D_1000054212 # _pdbx_database_status.entry_id 3IBP _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-07-16 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Li, Y.' 1 'Schoeffler, A.J.' 2 'Berger, J.M.' 3 'Oakley, M.G.' 4 # _citation.id primary _citation.title 'The crystal structure of the hinge domain of the Escherichia coli structural maintenance of chromosomes protein MukB.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 395 _citation.page_first 11 _citation.page_last 19 _citation.year 2010 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19853611 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2009.10.040 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Li, Y.' 1 primary 'Schoeffler, A.J.' 2 primary 'Berger, J.M.' 3 primary 'Oakley, M.G.' 4 # _cell.length_a 56.270 _cell.length_b 56.270 _cell.length_c 342.600 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3IBP _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 43 2 2' _symmetry.entry_id 3IBP _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 95 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Chromosome partition protein mukB' 34642.629 1 ? ? 'Dimerization Domain(UNP residues 566-863)' ? 2 non-polymer syn 'AMMONIUM ION' 18.038 1 ? ? ? ? 3 water nat water 18.015 5 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Structural maintenance of chromosome-related protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GSH(MSE)IASLSDSVSNAREER(MSE)ALRQEQEQLQSRIQSL(MSE)QRAPVWLAAQNSLNQLSEQCGEEFTSSQDVT EYLQQLLEREREAIVERDEVGARKNAVDEEIERLSQPGGSEDQRLNALAERFGGVLLSEIYDDVSLEDAPYFSALYGPSR HAIVVPDLSQVTEHLEGLTDCPEDLYLIEGDPQSFDDSVFSVDELEKAVVVKIADRQWRYSRFPEVPLFGRAARESRIES LHAEREVLSERFATLSFDVQKTQRLHQAFSRFIGSHLAVAFESDPEAEIRQLNSRRVELERALSNHENDNQQQR ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMIASLSDSVSNAREERMALRQEQEQLQSRIQSLMQRAPVWLAAQNSLNQLSEQCGEEFTSSQDVTEYLQQLLERERE AIVERDEVGARKNAVDEEIERLSQPGGSEDQRLNALAERFGGVLLSEIYDDVSLEDAPYFSALYGPSRHAIVVPDLSQVT EHLEGLTDCPEDLYLIEGDPQSFDDSVFSVDELEKAVVVKIADRQWRYSRFPEVPLFGRAARESRIESLHAEREVLSERF ATLSFDVQKTQRLHQAFSRFIGSHLAVAFESDPEAEIRQLNSRRVELERALSNHENDNQQQR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MSE n 1 5 ILE n 1 6 ALA n 1 7 SER n 1 8 LEU n 1 9 SER n 1 10 ASP n 1 11 SER n 1 12 VAL n 1 13 SER n 1 14 ASN n 1 15 ALA n 1 16 ARG n 1 17 GLU n 1 18 GLU n 1 19 ARG n 1 20 MSE n 1 21 ALA n 1 22 LEU n 1 23 ARG n 1 24 GLN n 1 25 GLU n 1 26 GLN n 1 27 GLU n 1 28 GLN n 1 29 LEU n 1 30 GLN n 1 31 SER n 1 32 ARG n 1 33 ILE n 1 34 GLN n 1 35 SER n 1 36 LEU n 1 37 MSE n 1 38 GLN n 1 39 ARG n 1 40 ALA n 1 41 PRO n 1 42 VAL n 1 43 TRP n 1 44 LEU n 1 45 ALA n 1 46 ALA n 1 47 GLN n 1 48 ASN n 1 49 SER n 1 50 LEU n 1 51 ASN n 1 52 GLN n 1 53 LEU n 1 54 SER n 1 55 GLU n 1 56 GLN n 1 57 CYS n 1 58 GLY n 1 59 GLU n 1 60 GLU n 1 61 PHE n 1 62 THR n 1 63 SER n 1 64 SER n 1 65 GLN n 1 66 ASP n 1 67 VAL n 1 68 THR n 1 69 GLU n 1 70 TYR n 1 71 LEU n 1 72 GLN n 1 73 GLN n 1 74 LEU n 1 75 LEU n 1 76 GLU n 1 77 ARG n 1 78 GLU n 1 79 ARG n 1 80 GLU n 1 81 ALA n 1 82 ILE n 1 83 VAL n 1 84 GLU n 1 85 ARG n 1 86 ASP n 1 87 GLU n 1 88 VAL n 1 89 GLY n 1 90 ALA n 1 91 ARG n 1 92 LYS n 1 93 ASN n 1 94 ALA n 1 95 VAL n 1 96 ASP n 1 97 GLU n 1 98 GLU n 1 99 ILE n 1 100 GLU n 1 101 ARG n 1 102 LEU n 1 103 SER n 1 104 GLN n 1 105 PRO n 1 106 GLY n 1 107 GLY n 1 108 SER n 1 109 GLU n 1 110 ASP n 1 111 GLN n 1 112 ARG n 1 113 LEU n 1 114 ASN n 1 115 ALA n 1 116 LEU n 1 117 ALA n 1 118 GLU n 1 119 ARG n 1 120 PHE n 1 121 GLY n 1 122 GLY n 1 123 VAL n 1 124 LEU n 1 125 LEU n 1 126 SER n 1 127 GLU n 1 128 ILE n 1 129 TYR n 1 130 ASP n 1 131 ASP n 1 132 VAL n 1 133 SER n 1 134 LEU n 1 135 GLU n 1 136 ASP n 1 137 ALA n 1 138 PRO n 1 139 TYR n 1 140 PHE n 1 141 SER n 1 142 ALA n 1 143 LEU n 1 144 TYR n 1 145 GLY n 1 146 PRO n 1 147 SER n 1 148 ARG n 1 149 HIS n 1 150 ALA n 1 151 ILE n 1 152 VAL n 1 153 VAL n 1 154 PRO n 1 155 ASP n 1 156 LEU n 1 157 SER n 1 158 GLN n 1 159 VAL n 1 160 THR n 1 161 GLU n 1 162 HIS n 1 163 LEU n 1 164 GLU n 1 165 GLY n 1 166 LEU n 1 167 THR n 1 168 ASP n 1 169 CYS n 1 170 PRO n 1 171 GLU n 1 172 ASP n 1 173 LEU n 1 174 TYR n 1 175 LEU n 1 176 ILE n 1 177 GLU n 1 178 GLY n 1 179 ASP n 1 180 PRO n 1 181 GLN n 1 182 SER n 1 183 PHE n 1 184 ASP n 1 185 ASP n 1 186 SER n 1 187 VAL n 1 188 PHE n 1 189 SER n 1 190 VAL n 1 191 ASP n 1 192 GLU n 1 193 LEU n 1 194 GLU n 1 195 LYS n 1 196 ALA n 1 197 VAL n 1 198 VAL n 1 199 VAL n 1 200 LYS n 1 201 ILE n 1 202 ALA n 1 203 ASP n 1 204 ARG n 1 205 GLN n 1 206 TRP n 1 207 ARG n 1 208 TYR n 1 209 SER n 1 210 ARG n 1 211 PHE n 1 212 PRO n 1 213 GLU n 1 214 VAL n 1 215 PRO n 1 216 LEU n 1 217 PHE n 1 218 GLY n 1 219 ARG n 1 220 ALA n 1 221 ALA n 1 222 ARG n 1 223 GLU n 1 224 SER n 1 225 ARG n 1 226 ILE n 1 227 GLU n 1 228 SER n 1 229 LEU n 1 230 HIS n 1 231 ALA n 1 232 GLU n 1 233 ARG n 1 234 GLU n 1 235 VAL n 1 236 LEU n 1 237 SER n 1 238 GLU n 1 239 ARG n 1 240 PHE n 1 241 ALA n 1 242 THR n 1 243 LEU n 1 244 SER n 1 245 PHE n 1 246 ASP n 1 247 VAL n 1 248 GLN n 1 249 LYS n 1 250 THR n 1 251 GLN n 1 252 ARG n 1 253 LEU n 1 254 HIS n 1 255 GLN n 1 256 ALA n 1 257 PHE n 1 258 SER n 1 259 ARG n 1 260 PHE n 1 261 ILE n 1 262 GLY n 1 263 SER n 1 264 HIS n 1 265 LEU n 1 266 ALA n 1 267 VAL n 1 268 ALA n 1 269 PHE n 1 270 GLU n 1 271 SER n 1 272 ASP n 1 273 PRO n 1 274 GLU n 1 275 ALA n 1 276 GLU n 1 277 ILE n 1 278 ARG n 1 279 GLN n 1 280 LEU n 1 281 ASN n 1 282 SER n 1 283 ARG n 1 284 ARG n 1 285 VAL n 1 286 GLU n 1 287 LEU n 1 288 GLU n 1 289 ARG n 1 290 ALA n 1 291 LEU n 1 292 SER n 1 293 ASN n 1 294 HIS n 1 295 GLU n 1 296 ASN n 1 297 ASP n 1 298 ASN n 1 299 GLN n 1 300 GLN n 1 301 GLN n 1 302 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'b0924, JW0907, mukB' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain K-12 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83333 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MUKB_ECOLI _struct_ref.pdbx_db_accession P22523 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;IASLSDSVSNAREERMALRQEQEQLQSRIQSLMQRAPVWLAAQNSLNQLSEQCGEEFTSSQDVTEYLQQLLEREREAIVE RDEVGARKNAVDEEIERLSQPGGSEDQRLNALAERFGGVLLSEIYDDVSLEDAPYFSALYGPSRHAIVVPDLSQVTEHLE GLTDCPEDLYLIEGDPQSFDDSVFSVDELEKAVVVKIADRQWRYSRFPEVPLFGRAARESRIESLHAEREVLSERFATLS FDVQKTQRLHQAFSRFIGSHLAVAFESDPEAEIRQLNSRRVELERALSNHENDNQQQR ; _struct_ref.pdbx_align_begin 566 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3IBP _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 302 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P22523 _struct_ref_seq.db_align_beg 566 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 863 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 566 _struct_ref_seq.pdbx_auth_seq_align_end 863 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3IBP GLY A 1 ? UNP P22523 ? ? 'EXPRESSION TAG' 562 1 1 3IBP SER A 2 ? UNP P22523 ? ? 'EXPRESSION TAG' 563 2 1 3IBP HIS A 3 ? UNP P22523 ? ? 'EXPRESSION TAG' 564 3 1 3IBP MSE A 4 ? UNP P22523 ? ? 'EXPRESSION TAG' 565 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NH4 non-polymer . 'AMMONIUM ION' ? 'H4 N 1' 18.038 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3IBP _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 3.91 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 68.58 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '165 mM MOPS, 165 mM Ammonium Bromide, 13.5% PEG 20k, pH 6.5, hanging drop, temperature 277K, VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2008-07-27 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.monochromator 'Double flat crystal, Si(111)' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.971976 1.0 2 0.979795 1.0 3 0.979656 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.3.1' _diffrn_source.pdbx_wavelength_list '0.971976, 0.979795, 0.979656' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.3.1 # _reflns.entry_id 3IBP _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3.0 _reflns.d_resolution_high 3.099 _reflns.d_resolution_low 150.0 _reflns.number_all 10802 _reflns.number_obs 10802 _reflns.percent_possible_obs 98.5 _reflns.pdbx_Rmerge_I_obs .095 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 24.5 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 12.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 3.099 _reflns_shell.d_res_low 3.15 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 83.0 _reflns_shell.Rmerge_I_obs 0.619 _reflns_shell.meanI_over_sigI_obs 1.5 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 4.1 _reflns_shell.number_unique_all 794 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3IBP _refine.ls_d_res_high 3.099 _refine.ls_d_res_low 56.270 _refine.pdbx_ls_sigma_F 1.73 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 96.050 _refine.ls_number_reflns_obs 10494 _refine.ls_number_reflns_all 10494 _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.247 _refine.ls_R_factor_R_work 0.243 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.279 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 10.000 _refine.ls_number_reflns_R_free 1049 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 99.631 _refine.solvent_model_param_bsol 40.879 _refine.solvent_model_param_ksol 0.289 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.798 _refine.aniso_B[2][2] 0.798 _refine.aniso_B[3][3] -16.069 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] -0.000 _refine.aniso_B[2][3] -0.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.720 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.110 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.900 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values MLHL _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.796 _refine.B_iso_max 346.33 _refine.B_iso_min 24.55 _refine.occupancy_max 1.00 _refine.occupancy_min 0.44 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2276 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 5 _refine_hist.number_atoms_total 2282 _refine_hist.d_res_high 3.099 _refine_hist.d_res_low 56.270 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 2322 0.008 ? ? 'X-RAY DIFFRACTION' ? f_angle_d 3139 1.254 ? ? 'X-RAY DIFFRACTION' ? f_chiral_restr 341 0.065 ? ? 'X-RAY DIFFRACTION' ? f_plane_restr 429 0.008 ? ? 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 885 16.691 ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 3.099 3.263 7 78.000 1057 . 0.321 0.383 . 117 . 1174 . . 'X-RAY DIFFRACTION' 3.263 3.467 7 96.000 1314 . 0.323 0.357 . 147 . 1461 . . 'X-RAY DIFFRACTION' 3.467 3.735 7 99.000 1357 . 0.271 0.311 . 151 . 1508 . . 'X-RAY DIFFRACTION' 3.735 4.110 7 99.000 1358 . 0.257 0.293 . 150 . 1508 . . 'X-RAY DIFFRACTION' 4.110 4.705 7 99.000 1405 . 0.211 0.252 . 156 . 1561 . . 'X-RAY DIFFRACTION' 4.705 5.926 7 100.000 1403 . 0.223 0.294 . 156 . 1559 . . 'X-RAY DIFFRACTION' 5.926 56.279 7 99.000 1551 . 0.213 0.217 . 172 . 1723 . . 'X-RAY DIFFRACTION' # _struct.entry_id 3IBP _struct.title 'The Crystal Structure of the Dimerization Domain of Escherichia coli Structural Maintenance of Chromosomes Protein MukB' _struct.pdbx_descriptor 'Chromosome partition protein mukB' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3IBP _struct_keywords.text ;MukB, Structural Maintenance of Chromosomes, SMC, condensin, cohesin, chromosome segregation, hinge, dimerization domain, ATP-binding, Cell cycle, Cell division, Chromosome partition, DNA condensation, DNA-binding, Nucleotide-binding ; _struct_keywords.pdbx_keywords 'CELL CYCLE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 11 ? CYS A 57 ? SER A 572 CYS A 618 1 ? 47 HELX_P HELX_P2 2 SER A 63 ? GLN A 104 ? SER A 624 GLN A 665 1 ? 42 HELX_P HELX_P3 3 ASP A 110 ? PHE A 120 ? ASP A 671 PHE A 681 1 ? 11 HELX_P HELX_P4 4 LEU A 125 ? TYR A 129 ? LEU A 686 TYR A 690 1 ? 5 HELX_P HELX_P5 5 ASP A 136 ? TYR A 144 ? ASP A 697 TYR A 705 1 ? 9 HELX_P HELX_P6 6 GLY A 145 ? ARG A 148 ? GLY A 706 ARG A 709 5 ? 4 HELX_P HELX_P7 7 LEU A 156 ? GLU A 164 ? LEU A 717 GLU A 725 1 ? 9 HELX_P HELX_P8 8 GLY A 218 ? HIS A 264 ? GLY A 779 HIS A 825 1 ? 47 HELX_P HELX_P9 9 ASP A 272 ? ASN A 293 ? ASP A 833 ASN A 854 1 ? 22 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ARG 19 C ? ? ? 1_555 A MSE 20 N ? ? A ARG 580 A MSE 581 1_555 ? ? ? ? ? ? ? 1.331 ? covale2 covale ? ? A MSE 20 C ? ? ? 1_555 A ALA 21 N ? ? A MSE 581 A ALA 582 1_555 ? ? ? ? ? ? ? 1.331 ? covale3 covale ? ? A LEU 36 C ? ? ? 1_555 A MSE 37 N ? ? A LEU 597 A MSE 598 1_555 ? ? ? ? ? ? ? 1.326 ? covale4 covale ? ? A MSE 37 C ? ? ? 1_555 A GLN 38 N ? ? A MSE 598 A GLN 599 1_555 ? ? ? ? ? ? ? 1.335 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 106 A . ? GLY 667 A GLY 107 A ? GLY 668 A 1 -0.85 2 GLY 107 A . ? GLY 668 A SER 108 A ? SER 669 A 1 -6.19 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 123 ? LEU A 124 ? VAL A 684 LEU A 685 A 2 ALA A 150 ? VAL A 152 ? ALA A 711 VAL A 713 A 3 TYR A 174 ? ILE A 176 ? TYR A 735 ILE A 737 B 1 VAL A 190 ? LEU A 193 ? VAL A 751 LEU A 754 B 2 ALA A 196 ? ALA A 202 ? ALA A 757 ALA A 763 B 3 GLN A 205 ? ARG A 210 ? GLN A 766 ARG A 771 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 123 ? N VAL A 684 O VAL A 152 ? O VAL A 713 A 2 3 N ILE A 151 ? N ILE A 712 O ILE A 176 ? O ILE A 737 B 1 2 N LEU A 193 ? N LEU A 754 O ALA A 196 ? O ALA A 757 B 2 3 N VAL A 199 ? N VAL A 760 O ARG A 207 ? O ARG A 768 # _atom_sites.entry_id 3IBP _atom_sites.fract_transf_matrix[1][1] 0.017771 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017771 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.002919 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 562 ? ? ? A . n A 1 2 SER 2 563 ? ? ? A . n A 1 3 HIS 3 564 ? ? ? A . n A 1 4 MSE 4 565 ? ? ? A . n A 1 5 ILE 5 566 ? ? ? A . n A 1 6 ALA 6 567 ? ? ? A . n A 1 7 SER 7 568 ? ? ? A . n A 1 8 LEU 8 569 ? ? ? A . n A 1 9 SER 9 570 ? ? ? A . n A 1 10 ASP 10 571 ? ? ? A . n A 1 11 SER 11 572 572 SER SER A . n A 1 12 VAL 12 573 573 VAL VAL A . n A 1 13 SER 13 574 574 SER SER A . n A 1 14 ASN 14 575 575 ASN ASN A . n A 1 15 ALA 15 576 576 ALA ALA A . n A 1 16 ARG 16 577 577 ARG ARG A . n A 1 17 GLU 17 578 578 GLU GLU A . n A 1 18 GLU 18 579 579 GLU GLU A . n A 1 19 ARG 19 580 580 ARG ARG A . n A 1 20 MSE 20 581 581 MSE MSE A . n A 1 21 ALA 21 582 582 ALA ALA A . n A 1 22 LEU 22 583 583 LEU LEU A . n A 1 23 ARG 23 584 584 ARG ARG A . n A 1 24 GLN 24 585 585 GLN GLN A . n A 1 25 GLU 25 586 586 GLU GLU A . n A 1 26 GLN 26 587 587 GLN GLN A . n A 1 27 GLU 27 588 588 GLU GLU A . n A 1 28 GLN 28 589 589 GLN GLN A . n A 1 29 LEU 29 590 590 LEU LEU A . n A 1 30 GLN 30 591 591 GLN GLN A . n A 1 31 SER 31 592 592 SER SER A . n A 1 32 ARG 32 593 593 ARG ARG A . n A 1 33 ILE 33 594 594 ILE ILE A . n A 1 34 GLN 34 595 595 GLN GLN A . n A 1 35 SER 35 596 596 SER SER A . n A 1 36 LEU 36 597 597 LEU LEU A . n A 1 37 MSE 37 598 598 MSE MSE A . n A 1 38 GLN 38 599 599 GLN GLN A . n A 1 39 ARG 39 600 600 ARG ARG A . n A 1 40 ALA 40 601 601 ALA ALA A . n A 1 41 PRO 41 602 602 PRO PRO A . n A 1 42 VAL 42 603 603 VAL VAL A . n A 1 43 TRP 43 604 604 TRP TRP A . n A 1 44 LEU 44 605 605 LEU LEU A . n A 1 45 ALA 45 606 606 ALA ALA A . n A 1 46 ALA 46 607 607 ALA ALA A . n A 1 47 GLN 47 608 608 GLN GLN A . n A 1 48 ASN 48 609 609 ASN ASN A . n A 1 49 SER 49 610 610 SER SER A . n A 1 50 LEU 50 611 611 LEU LEU A . n A 1 51 ASN 51 612 612 ASN ASN A . n A 1 52 GLN 52 613 613 GLN GLN A . n A 1 53 LEU 53 614 614 LEU LEU A . n A 1 54 SER 54 615 615 SER SER A . n A 1 55 GLU 55 616 616 GLU GLU A . n A 1 56 GLN 56 617 617 GLN GLN A . n A 1 57 CYS 57 618 618 CYS CYS A . n A 1 58 GLY 58 619 619 GLY GLY A . n A 1 59 GLU 59 620 620 GLU GLU A . n A 1 60 GLU 60 621 621 GLU GLU A . n A 1 61 PHE 61 622 622 PHE PHE A . n A 1 62 THR 62 623 623 THR THR A . n A 1 63 SER 63 624 624 SER SER A . n A 1 64 SER 64 625 625 SER SER A . n A 1 65 GLN 65 626 626 GLN GLN A . n A 1 66 ASP 66 627 627 ASP ASP A . n A 1 67 VAL 67 628 628 VAL VAL A . n A 1 68 THR 68 629 629 THR THR A . n A 1 69 GLU 69 630 630 GLU GLU A . n A 1 70 TYR 70 631 631 TYR TYR A . n A 1 71 LEU 71 632 632 LEU LEU A . n A 1 72 GLN 72 633 633 GLN GLN A . n A 1 73 GLN 73 634 634 GLN GLN A . n A 1 74 LEU 74 635 635 LEU LEU A . n A 1 75 LEU 75 636 636 LEU LEU A . n A 1 76 GLU 76 637 637 GLU GLU A . n A 1 77 ARG 77 638 638 ARG ARG A . n A 1 78 GLU 78 639 639 GLU GLU A . n A 1 79 ARG 79 640 640 ARG ARG A . n A 1 80 GLU 80 641 641 GLU GLU A . n A 1 81 ALA 81 642 642 ALA ALA A . n A 1 82 ILE 82 643 643 ILE ILE A . n A 1 83 VAL 83 644 644 VAL VAL A . n A 1 84 GLU 84 645 645 GLU GLU A . n A 1 85 ARG 85 646 646 ARG ARG A . n A 1 86 ASP 86 647 647 ASP ASP A . n A 1 87 GLU 87 648 648 GLU GLU A . n A 1 88 VAL 88 649 649 VAL VAL A . n A 1 89 GLY 89 650 650 GLY GLY A . n A 1 90 ALA 90 651 651 ALA ALA A . n A 1 91 ARG 91 652 652 ARG ARG A . n A 1 92 LYS 92 653 653 LYS LYS A . n A 1 93 ASN 93 654 654 ASN ASN A . n A 1 94 ALA 94 655 655 ALA ALA A . n A 1 95 VAL 95 656 656 VAL VAL A . n A 1 96 ASP 96 657 657 ASP ASP A . n A 1 97 GLU 97 658 658 GLU GLU A . n A 1 98 GLU 98 659 659 GLU GLU A . n A 1 99 ILE 99 660 660 ILE ILE A . n A 1 100 GLU 100 661 661 GLU GLU A . n A 1 101 ARG 101 662 662 ARG ARG A . n A 1 102 LEU 102 663 663 LEU LEU A . n A 1 103 SER 103 664 664 SER SER A . n A 1 104 GLN 104 665 665 GLN GLN A . n A 1 105 PRO 105 666 666 PRO PRO A . n A 1 106 GLY 106 667 667 GLY GLY A . n A 1 107 GLY 107 668 668 GLY GLY A . n A 1 108 SER 108 669 669 SER SER A . n A 1 109 GLU 109 670 670 GLU GLU A . n A 1 110 ASP 110 671 671 ASP ASP A . n A 1 111 GLN 111 672 672 GLN GLN A . n A 1 112 ARG 112 673 673 ARG ARG A . n A 1 113 LEU 113 674 674 LEU LEU A . n A 1 114 ASN 114 675 675 ASN ASN A . n A 1 115 ALA 115 676 676 ALA ALA A . n A 1 116 LEU 116 677 677 LEU LEU A . n A 1 117 ALA 117 678 678 ALA ALA A . n A 1 118 GLU 118 679 679 GLU GLU A . n A 1 119 ARG 119 680 680 ARG ARG A . n A 1 120 PHE 120 681 681 PHE PHE A . n A 1 121 GLY 121 682 682 GLY GLY A . n A 1 122 GLY 122 683 683 GLY GLY A . n A 1 123 VAL 123 684 684 VAL VAL A . n A 1 124 LEU 124 685 685 LEU LEU A . n A 1 125 LEU 125 686 686 LEU LEU A . n A 1 126 SER 126 687 687 SER SER A . n A 1 127 GLU 127 688 688 GLU GLU A . n A 1 128 ILE 128 689 689 ILE ILE A . n A 1 129 TYR 129 690 690 TYR TYR A . n A 1 130 ASP 130 691 691 ASP ASP A . n A 1 131 ASP 131 692 692 ASP ASP A . n A 1 132 VAL 132 693 693 VAL VAL A . n A 1 133 SER 133 694 694 SER SER A . n A 1 134 LEU 134 695 695 LEU LEU A . n A 1 135 GLU 135 696 696 GLU GLU A . n A 1 136 ASP 136 697 697 ASP ASP A . n A 1 137 ALA 137 698 698 ALA ALA A . n A 1 138 PRO 138 699 699 PRO PRO A . n A 1 139 TYR 139 700 700 TYR TYR A . n A 1 140 PHE 140 701 701 PHE PHE A . n A 1 141 SER 141 702 702 SER SER A . n A 1 142 ALA 142 703 703 ALA ALA A . n A 1 143 LEU 143 704 704 LEU LEU A . n A 1 144 TYR 144 705 705 TYR TYR A . n A 1 145 GLY 145 706 706 GLY GLY A . n A 1 146 PRO 146 707 707 PRO PRO A . n A 1 147 SER 147 708 708 SER SER A . n A 1 148 ARG 148 709 709 ARG ARG A . n A 1 149 HIS 149 710 710 HIS HIS A . n A 1 150 ALA 150 711 711 ALA ALA A . n A 1 151 ILE 151 712 712 ILE ILE A . n A 1 152 VAL 152 713 713 VAL VAL A . n A 1 153 VAL 153 714 714 VAL VAL A . n A 1 154 PRO 154 715 715 PRO PRO A . n A 1 155 ASP 155 716 716 ASP ASP A . n A 1 156 LEU 156 717 717 LEU LEU A . n A 1 157 SER 157 718 718 SER SER A . n A 1 158 GLN 158 719 719 GLN GLN A . n A 1 159 VAL 159 720 720 VAL VAL A . n A 1 160 THR 160 721 721 THR THR A . n A 1 161 GLU 161 722 722 GLU GLU A . n A 1 162 HIS 162 723 723 HIS HIS A . n A 1 163 LEU 163 724 724 LEU LEU A . n A 1 164 GLU 164 725 725 GLU GLU A . n A 1 165 GLY 165 726 726 GLY GLY A . n A 1 166 LEU 166 727 727 LEU LEU A . n A 1 167 THR 167 728 728 THR THR A . n A 1 168 ASP 168 729 729 ASP ASP A . n A 1 169 CYS 169 730 730 CYS CYS A . n A 1 170 PRO 170 731 731 PRO PRO A . n A 1 171 GLU 171 732 732 GLU GLU A . n A 1 172 ASP 172 733 733 ASP ASP A . n A 1 173 LEU 173 734 734 LEU LEU A . n A 1 174 TYR 174 735 735 TYR TYR A . n A 1 175 LEU 175 736 736 LEU LEU A . n A 1 176 ILE 176 737 737 ILE ILE A . n A 1 177 GLU 177 738 738 GLU GLU A . n A 1 178 GLY 178 739 739 GLY GLY A . n A 1 179 ASP 179 740 740 ASP ASP A . n A 1 180 PRO 180 741 741 PRO PRO A . n A 1 181 GLN 181 742 742 GLN GLN A . n A 1 182 SER 182 743 743 SER SER A . n A 1 183 PHE 183 744 744 PHE PHE A . n A 1 184 ASP 184 745 745 ASP ASP A . n A 1 185 ASP 185 746 746 ASP ASP A . n A 1 186 SER 186 747 747 SER SER A . n A 1 187 VAL 187 748 748 VAL VAL A . n A 1 188 PHE 188 749 749 PHE PHE A . n A 1 189 SER 189 750 750 SER SER A . n A 1 190 VAL 190 751 751 VAL VAL A . n A 1 191 ASP 191 752 752 ASP ASP A . n A 1 192 GLU 192 753 753 GLU GLU A . n A 1 193 LEU 193 754 754 LEU LEU A . n A 1 194 GLU 194 755 755 GLU GLU A . n A 1 195 LYS 195 756 756 LYS LYS A . n A 1 196 ALA 196 757 757 ALA ALA A . n A 1 197 VAL 197 758 758 VAL VAL A . n A 1 198 VAL 198 759 759 VAL VAL A . n A 1 199 VAL 199 760 760 VAL VAL A . n A 1 200 LYS 200 761 761 LYS LYS A . n A 1 201 ILE 201 762 762 ILE ILE A . n A 1 202 ALA 202 763 763 ALA ALA A . n A 1 203 ASP 203 764 764 ASP ASP A . n A 1 204 ARG 204 765 765 ARG ARG A . n A 1 205 GLN 205 766 766 GLN GLN A . n A 1 206 TRP 206 767 767 TRP TRP A . n A 1 207 ARG 207 768 768 ARG ARG A . n A 1 208 TYR 208 769 769 TYR TYR A . n A 1 209 SER 209 770 770 SER SER A . n A 1 210 ARG 210 771 771 ARG ARG A . n A 1 211 PHE 211 772 772 PHE PHE A . n A 1 212 PRO 212 773 773 PRO PRO A . n A 1 213 GLU 213 774 774 GLU GLU A . n A 1 214 VAL 214 775 775 VAL VAL A . n A 1 215 PRO 215 776 776 PRO PRO A . n A 1 216 LEU 216 777 777 LEU LEU A . n A 1 217 PHE 217 778 778 PHE PHE A . n A 1 218 GLY 218 779 779 GLY GLY A . n A 1 219 ARG 219 780 780 ARG ARG A . n A 1 220 ALA 220 781 781 ALA ALA A . n A 1 221 ALA 221 782 782 ALA ALA A . n A 1 222 ARG 222 783 783 ARG ARG A . n A 1 223 GLU 223 784 784 GLU GLU A . n A 1 224 SER 224 785 785 SER SER A . n A 1 225 ARG 225 786 786 ARG ARG A . n A 1 226 ILE 226 787 787 ILE ILE A . n A 1 227 GLU 227 788 788 GLU GLU A . n A 1 228 SER 228 789 789 SER SER A . n A 1 229 LEU 229 790 790 LEU LEU A . n A 1 230 HIS 230 791 791 HIS HIS A . n A 1 231 ALA 231 792 792 ALA ALA A . n A 1 232 GLU 232 793 793 GLU GLU A . n A 1 233 ARG 233 794 794 ARG ARG A . n A 1 234 GLU 234 795 795 GLU GLU A . n A 1 235 VAL 235 796 796 VAL VAL A . n A 1 236 LEU 236 797 797 LEU LEU A . n A 1 237 SER 237 798 798 SER SER A . n A 1 238 GLU 238 799 799 GLU GLU A . n A 1 239 ARG 239 800 800 ARG ARG A . n A 1 240 PHE 240 801 801 PHE PHE A . n A 1 241 ALA 241 802 802 ALA ALA A . n A 1 242 THR 242 803 803 THR THR A . n A 1 243 LEU 243 804 804 LEU LEU A . n A 1 244 SER 244 805 805 SER SER A . n A 1 245 PHE 245 806 806 PHE PHE A . n A 1 246 ASP 246 807 807 ASP ASP A . n A 1 247 VAL 247 808 808 VAL VAL A . n A 1 248 GLN 248 809 809 GLN GLN A . n A 1 249 LYS 249 810 810 LYS LYS A . n A 1 250 THR 250 811 811 THR THR A . n A 1 251 GLN 251 812 812 GLN GLN A . n A 1 252 ARG 252 813 813 ARG ARG A . n A 1 253 LEU 253 814 814 LEU LEU A . n A 1 254 HIS 254 815 815 HIS HIS A . n A 1 255 GLN 255 816 816 GLN GLN A . n A 1 256 ALA 256 817 817 ALA ALA A . n A 1 257 PHE 257 818 818 PHE PHE A . n A 1 258 SER 258 819 819 SER SER A . n A 1 259 ARG 259 820 820 ARG ARG A . n A 1 260 PHE 260 821 821 PHE PHE A . n A 1 261 ILE 261 822 822 ILE ILE A . n A 1 262 GLY 262 823 823 GLY GLY A . n A 1 263 SER 263 824 824 SER SER A . n A 1 264 HIS 264 825 825 HIS HIS A . n A 1 265 LEU 265 826 826 LEU LEU A . n A 1 266 ALA 266 827 827 ALA ALA A . n A 1 267 VAL 267 828 828 VAL VAL A . n A 1 268 ALA 268 829 829 ALA ALA A . n A 1 269 PHE 269 830 830 PHE PHE A . n A 1 270 GLU 270 831 831 GLU GLU A . n A 1 271 SER 271 832 832 SER SER A . n A 1 272 ASP 272 833 833 ASP ASP A . n A 1 273 PRO 273 834 834 PRO PRO A . n A 1 274 GLU 274 835 835 GLU GLU A . n A 1 275 ALA 275 836 836 ALA ALA A . n A 1 276 GLU 276 837 837 GLU GLU A . n A 1 277 ILE 277 838 838 ILE ILE A . n A 1 278 ARG 278 839 839 ARG ARG A . n A 1 279 GLN 279 840 840 GLN GLN A . n A 1 280 LEU 280 841 841 LEU LEU A . n A 1 281 ASN 281 842 842 ASN ASN A . n A 1 282 SER 282 843 843 SER SER A . n A 1 283 ARG 283 844 844 ARG ARG A . n A 1 284 ARG 284 845 845 ARG ARG A . n A 1 285 VAL 285 846 846 VAL VAL A . n A 1 286 GLU 286 847 847 GLU GLU A . n A 1 287 LEU 287 848 848 LEU LEU A . n A 1 288 GLU 288 849 849 GLU GLU A . n A 1 289 ARG 289 850 850 ARG ARG A . n A 1 290 ALA 290 851 851 ALA ALA A . n A 1 291 LEU 291 852 852 LEU LEU A . n A 1 292 SER 292 853 853 SER SER A . n A 1 293 ASN 293 854 854 ASN ASN A . n A 1 294 HIS 294 855 ? ? ? A . n A 1 295 GLU 295 856 ? ? ? A . n A 1 296 ASN 296 857 ? ? ? A . n A 1 297 ASP 297 858 ? ? ? A . n A 1 298 ASN 298 859 ? ? ? A . n A 1 299 GLN 299 860 ? ? ? A . n A 1 300 GLN 300 861 ? ? ? A . n A 1 301 GLN 301 862 ? ? ? A . n A 1 302 ARG 302 863 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NH4 1 1 1 NH4 NH4 A . C 3 HOH 1 2 2 HOH HOH A . C 3 HOH 2 3 3 HOH HOH A . C 3 HOH 3 4 4 HOH HOH A . C 3 HOH 4 5 5 HOH HOH A . C 3 HOH 5 864 1 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 20 A MSE 581 ? MET SELENOMETHIONINE 2 A MSE 37 A MSE 598 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2 A,B,C 2 1,3 A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2940 ? 1 MORE -7 ? 1 'SSA (A^2)' 34720 ? 2 'ABSA (A^2)' 3220 ? 2 MORE -6 ? 2 'SSA (A^2)' 34430 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_376 y-2,x+2,-z+5/4 0.0000000000 1.0000000000 0.0000000000 -112.5400000000 1.0000000000 0.0000000000 0.0000000000 112.5400000000 0.0000000000 0.0000000000 -1.0000000000 428.2500000000 3 'crystal symmetry operation' 5_556 -x,y,-z+1 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 342.6000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-01-26 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Source and taxonomy' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 4.8801 38.7410 176.5580 0.2740 0.8159 0.4414 0.0300 -0.0144 0.0018 4.0414 0.2954 4.3095 0.4269 -3.6720 -0.3361 -0.2727 -0.0953 0.0000 -0.5741 -0.1514 -0.0833 -0.1351 0.1828 0.9317 'X-RAY DIFFRACTION' 2 ? refined -52.5667 47.8292 217.0006 0.1864 0.3368 0.3974 -0.0283 0.1291 -0.0210 9.3746 5.7419 8.3508 -2.1210 0.9616 1.1173 -0.2105 0.4973 0.0000 -0.8644 -0.1617 -0.1207 0.4189 -0.3528 0.4533 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 572 A 667 'Chain A and (resseq 572:667 or resseq 780:854)' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 1 A 780 A 854 'Chain A and (resseq 572:667 or resseq 780:854)' ? ? ? ? ? 'X-RAY DIFFRACTION' 3 2 A 668 A 779 'Chain A and resseq 668:779' ? ? ? ? ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 PHENIX 2009_02_15_2320_3 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 4 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 Blu-Ice . ? ? ? ? 'data collection' ? ? ? 6 SOLVE . ? ? ? ? phasing ? ? ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 562 ? A GLY 1 2 1 Y 1 A SER 563 ? A SER 2 3 1 Y 1 A HIS 564 ? A HIS 3 4 1 Y 1 A MSE 565 ? A MSE 4 5 1 Y 1 A ILE 566 ? A ILE 5 6 1 Y 1 A ALA 567 ? A ALA 6 7 1 Y 1 A SER 568 ? A SER 7 8 1 Y 1 A LEU 569 ? A LEU 8 9 1 Y 1 A SER 570 ? A SER 9 10 1 Y 1 A ASP 571 ? A ASP 10 11 1 Y 1 A HIS 855 ? A HIS 294 12 1 Y 1 A GLU 856 ? A GLU 295 13 1 Y 1 A ASN 857 ? A ASN 296 14 1 Y 1 A ASP 858 ? A ASP 297 15 1 Y 1 A ASN 859 ? A ASN 298 16 1 Y 1 A GLN 860 ? A GLN 299 17 1 Y 1 A GLN 861 ? A GLN 300 18 1 Y 1 A GLN 862 ? A GLN 301 19 1 Y 1 A ARG 863 ? A ARG 302 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'AMMONIUM ION' NH4 3 water HOH #