HEADER IMMUNE SYSTEM 22-JUL-09 3IDY TITLE CRYSTAL STRUCTURE OF HIV-GP120 CORE IN COMPLEX WITH CD4-BINDING SITE TITLE 2 ANTIBODY B13, SPACE GROUP C2221 CAVEAT 3IDY NAG G 588 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HIV-1 HXBC2 GP120 CORE; COMPND 3 CHAIN: G, A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: FAB B13 HEAVY CHAIN; COMPND 8 CHAIN: H, B; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: FAB B13 LIGHT CHAIN; COMPND 12 CHAIN: L, C; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1; SOURCE 3 ORGANISM_TAXID: 11676; SOURCE 4 STRAIN: HXBC2; SOURCE 5 GENE: ENV; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293F; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PCDNA3.1(-); SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 17 EXPRESSION_SYSTEM_CELL_LINE: HEK293F; SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 19 EXPRESSION_SYSTEM_PLASMID: PCDNA3.1(-); SOURCE 20 MOL_ID: 3; SOURCE 21 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 22 ORGANISM_COMMON: HUMAN; SOURCE 23 ORGANISM_TAXID: 9606; SOURCE 24 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 25 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 26 EXPRESSION_SYSTEM_CELL_LINE: HEK293F; SOURCE 27 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 28 EXPRESSION_SYSTEM_PLASMID: PCDNA3.1(-) KEYWDS HIV-1, ANTIBODY, GP120, B13, ENVELOPE GLYCAN PROTEIN, CD4-BINDING KEYWDS 2 SITE, AIDS, APOPTOSIS, CELL MEMBRANE, CLEAVAGE ON PAIR OF BASIC KEYWDS 3 RESIDUES, DISULFIDE BOND, ENVELOPE PROTEIN, FUSION PROTEIN, HOST- KEYWDS 4 VIRUS INTERACTION, MEMBRANE, TRANSMEMBRANE, VIRAL IMMUNOEVASION, KEYWDS 5 VIRION, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR L.CHEN,Y.D.KWON,T.ZHOU,X.WU,S.O'DELL,L.CAVACINI,A.J.HESSELL, AUTHOR 2 M.PANCERA,M.TANG,L.XU,Z.Y.YANG,M.Y.ZHANG,J.ARTHOS,D.R.BURTON, AUTHOR 3 D.S.DIMITROV,G.J.NABEL,M.POSNER,J.SODROSKI,R.WYATT,J.R.MASCOLA, AUTHOR 4 P.D.KWONG REVDAT 8 20-NOV-24 3IDY 1 REMARK REVDAT 7 06-SEP-23 3IDY 1 SOURCE DBREF REVDAT 6 31-MAR-21 3IDY 1 SOURCE HETSYN REVDAT 5 29-JUL-20 3IDY 1 CAVEAT COMPND REMARK DBREF REVDAT 5 2 1 HETNAM LINK SITE REVDAT 4 13-JUL-11 3IDY 1 VERSN REVDAT 3 29-DEC-09 3IDY 1 JRNL REVDAT 2 22-DEC-09 3IDY 1 JRNL REVDAT 1 17-NOV-09 3IDY 0 JRNL AUTH L.CHEN,Y.DO KWON,T.ZHOU,X.WU,S.O'DELL,L.CAVACINI, JRNL AUTH 2 A.J.HESSELL,M.PANCERA,M.TANG,L.XU,Z.Y.YANG,M.Y.ZHANG, JRNL AUTH 3 J.ARTHOS,D.R.BURTON,D.S.DIMITROV,G.J.NABEL,M.R.POSNER, JRNL AUTH 4 J.SODROSKI,R.WYATT,J.R.MASCOLA,P.D.KWONG JRNL TITL STRUCTURAL BASIS OF IMMUNE EVASION AT THE SITE OF CD4 JRNL TITL 2 ATTACHMENT ON HIV-1 GP120. JRNL REF SCIENCE V. 326 1123 2009 JRNL REFN ISSN 0036-8075 JRNL PMID 19965434 JRNL DOI 10.1126/SCIENCE.1175868 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.20 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.890 REMARK 3 COMPLETENESS FOR RANGE (%) : 47.1 REMARK 3 NUMBER OF REFLECTIONS : 35358 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 1778 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.2083 - 7.5123 0.54 2963 178 0.2193 0.2331 REMARK 3 2 7.5123 - 5.9678 0.53 2931 145 0.2038 0.2498 REMARK 3 3 5.9678 - 5.2148 0.53 2873 153 0.1633 0.2326 REMARK 3 4 5.2148 - 4.7387 0.52 2875 153 0.1449 0.2066 REMARK 3 5 4.7387 - 4.3994 0.52 2841 153 0.1468 0.2054 REMARK 3 6 4.3994 - 4.1402 0.52 2886 134 0.1627 0.1814 REMARK 3 7 4.1402 - 3.9330 0.52 2795 158 0.1719 0.2130 REMARK 3 8 3.9330 - 3.7619 0.51 2822 155 0.1926 0.2264 REMARK 3 9 3.7619 - 3.6172 0.50 2732 139 0.2085 0.2749 REMARK 3 10 3.6172 - 3.4924 0.47 2565 135 0.2250 0.2812 REMARK 3 11 3.4924 - 3.3833 0.41 2233 124 0.2465 0.2930 REMARK 3 12 3.3833 - 3.2866 0.33 1815 92 0.2726 0.3040 REMARK 3 13 3.2866 - 3.2000 0.23 1249 59 0.2856 0.3897 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.29 REMARK 3 B_SOL : 97.97 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.000 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 12184 REMARK 3 ANGLE : 0.796 16518 REMARK 3 CHIRALITY : 0.051 1895 REMARK 3 PLANARITY : 0.004 2084 REMARK 3 DIHEDRAL : 15.911 4424 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN C AND RESID 110:214 REMARK 3 ORIGIN FOR THE GROUP (A): 75.6898 49.5791 21.0140 REMARK 3 T TENSOR REMARK 3 T11: 0.9186 T22: 1.0294 REMARK 3 T33: 1.0746 T12: 0.0863 REMARK 3 T13: 0.2481 T23: 0.0794 REMARK 3 L TENSOR REMARK 3 L11: 0.9692 L22: -0.7162 REMARK 3 L33: 2.9942 L12: 0.1442 REMARK 3 L13: -0.2274 L23: -0.2981 REMARK 3 S TENSOR REMARK 3 S11: -0.1795 S12: 0.2881 S13: -0.3859 REMARK 3 S21: -0.0066 S22: -0.1439 S23: 0.0043 REMARK 3 S31: 0.0873 S32: 0.2210 S33: 0.2681 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 3 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN G AND (RESSEQ 83:119 OR RESSEQ REMARK 3 205:299 OR RESSEQ 329:397 OR RESSEQ 410: REMARK 3 418 OR RESID 420:458 OR RESID 465:492 ) REMARK 3 AND (NOT ELEMENT H) REMARK 3 SELECTION : CHAIN A AND (RESSEQ 83:119 OR RESSEQ REMARK 3 205:299 OR RESSEQ 329:397 OR RESSEQ 410: REMARK 3 418 OR RESID 420:458 OR RESID 465:492 ) REMARK 3 AND (NOT ELEMENT H) REMARK 3 ATOM PAIRS NUMBER : 2166 REMARK 3 RMSD : 0.021 REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN H AND (RESSEQ 1:101 OR RESID REMARK 3 110:231 ) AND (NOT ELEMENT H) REMARK 3 SELECTION : CHAIN B AND (RESSEQ 1:101 OR RESID REMARK 3 110:231 ) AND (NOT ELEMENT H) REMARK 3 ATOM PAIRS NUMBER : 1662 REMARK 3 RMSD : 0.013 REMARK 3 NCS GROUP : 3 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN L AND (RESSEQ 1:29 OR RESSEQ 31:212 REMARK 3 ) AND (NOT ELEMENT H) REMARK 3 SELECTION : CHAIN C AND (RESSEQ 1:29 OR RESSEQ 31:212 REMARK 3 ) AND (NOT ELEMENT H) REMARK 3 ATOM PAIRS NUMBER : 1630 REMARK 3 RMSD : 0.015 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3IDY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-JUL-09. REMARK 100 THE DEPOSITION ID IS D_1000054291. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-OCT-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35856 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 86.5 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09900 REMARK 200 FOR THE DATA SET : 21.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.31 REMARK 200 COMPLETENESS FOR SHELL (%) : 34.0 REMARK 200 DATA REDUNDANCY IN SHELL : 1.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.45000 REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3IDX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 8 % PEG 8000, 6.5 % ISOPROPANOL, 200 REMARK 280 MM AMMONIUM SULFATE, 100 MM HEPES, PH 7.5, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 108.44300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 108.44300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 53.08400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 102.15800 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 53.08400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 102.15800 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 108.44300 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 53.08400 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 102.15800 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 108.44300 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 53.08400 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 102.15800 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS AN ANTIGEN-ANTIBODY COMPLEX THAT REMARK 300 CONTAINS CHAIN G IN COMPLEX WITH CHAIN H AND L OR CHAIN A IN REMARK 300 COMPLEX WITH CHAIN B AND C. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H, L, A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H, L, A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR G 399 REMARK 465 TRP G 400 REMARK 465 SER G 401 REMARK 465 THR G 402 REMARK 465 GLU G 403 REMARK 465 GLY G 404 REMARK 465 SER G 405 REMARK 465 ASN G 406 REMARK 465 ASN G 407 REMARK 465 THR G 408 REMARK 465 GLU G 409 REMARK 465 LYS H 129 REMARK 465 SER H 130 REMARK 465 CYS L 214 REMARK 465 GLY A 192 REMARK 465 ALA A 193 REMARK 465 GLY A 194 REMARK 465 THR A 399 REMARK 465 TRP A 400 REMARK 465 SER A 401 REMARK 465 THR A 402 REMARK 465 GLU A 403 REMARK 465 GLY A 404 REMARK 465 SER A 405 REMARK 465 ASN A 406 REMARK 465 ASN A 407 REMARK 465 THR A 408 REMARK 465 GLU A 409 REMARK 465 LYS B 129 REMARK 465 SER B 130 REMARK 465 CYS C 214 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN A 241 C2 NAG A 741 1.71 REMARK 500 ND2 ASN G 241 C2 NAG G 741 1.72 REMARK 500 ND2 ASN G 295 C2 NAG G 795 1.99 REMARK 500 ND2 ASN A 230 C2 NAG A 730 1.99 REMARK 500 CG ASN G 463 C1 NAG G 963 2.03 REMARK 500 ND2 ASN G 392 C2 NAG G 892 2.15 REMARK 500 ND2 ASN G 276 C2 NAG G 776 2.16 REMARK 500 ND2 ASN A 234 C2 NAG A 734 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN G 88 -12.47 69.61 REMARK 500 ASP G 107 -164.55 -77.76 REMARK 500 ILE G 108 113.71 75.66 REMARK 500 LEU G 111 119.79 66.45 REMARK 500 CYS G 205 53.04 81.59 REMARK 500 LYS G 207 116.23 -26.91 REMARK 500 PRO G 220 -179.43 -56.94 REMARK 500 ASN G 230 106.76 -56.01 REMARK 500 GLN G 258 -57.82 74.40 REMARK 500 GLU G 268 -96.52 -90.07 REMARK 500 ASN G 276 100.49 -178.76 REMARK 500 SER G 387 31.90 -85.73 REMARK 500 ASN G 392 67.15 -155.22 REMARK 500 SER G 440 -95.12 -175.34 REMARK 500 SER G 446 128.73 89.70 REMARK 500 SER G 447 -153.84 -146.78 REMARK 500 ASN G 460 -34.81 -35.60 REMARK 500 SER G 461 38.37 -75.99 REMARK 500 ASN G 463 -98.41 -121.68 REMARK 500 PHE H 27 136.87 -174.43 REMARK 500 THR H 28 98.55 -52.25 REMARK 500 ARG H 55 -86.51 -64.19 REMARK 500 VAL H 63 -11.80 -146.07 REMARK 500 LYS H 64 105.71 -48.75 REMARK 500 ASN H 73 1.65 -62.51 REMARK 500 TYR H 100C 1.00 -150.71 REMARK 500 ASP H 101 -53.93 -121.76 REMARK 500 PRO H 126 -153.01 -61.81 REMARK 500 ASP H 144 78.63 65.04 REMARK 500 PHE H 146 135.95 -178.07 REMARK 500 PRO H 147 -151.52 -94.89 REMARK 500 SER H 177 135.99 -173.00 REMARK 500 SER H 188 23.85 -143.08 REMARK 500 ASN H 199 83.93 -154.47 REMARK 500 LYS H 214 -146.55 -98.81 REMARK 500 SER H 215 64.78 69.56 REMARK 500 ARG L 30 -124.66 48.94 REMARK 500 ALA L 51 -59.11 66.91 REMARK 500 SER L 52 35.72 -140.99 REMARK 500 PRO L 59 157.93 -44.94 REMARK 500 SER L 114 108.25 -58.40 REMARK 500 ASN L 138 78.94 34.86 REMARK 500 ARG L 202 -31.65 -34.50 REMARK 500 PRO L 204 122.22 -38.86 REMARK 500 PHE L 209 -158.46 177.96 REMARK 500 ARG L 211 30.92 -79.80 REMARK 500 ASN A 88 -12.56 69.61 REMARK 500 ASP A 107 -164.37 -77.99 REMARK 500 ILE A 108 113.13 75.72 REMARK 500 LEU A 111 118.81 66.03 REMARK 500 REMARK 500 THIS ENTRY HAS 97 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3IDX RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HIV-GP120 CORE IN COMPLEX WITH CD4-BINDING REMARK 900 SITE ANTIBODY B13. IN SPACE GROUP C222 DBREF 3IDY G 83 492 PDB 3IDY 3IDY 83 492 DBREF 3IDY H 1 216 PDB 3IDY 3IDY 1 216 DBREF 3IDY L 1 214 PDB 3IDY 3IDY 1 214 DBREF 3IDY A 83 492 PDB 3IDY 3IDY 83 492 DBREF 3IDY B 1 216 PDB 3IDY 3IDY 1 216 DBREF 3IDY C 1 214 PDB 3IDY 3IDY 1 214 SEQRES 1 G 317 GLU VAL VAL LEU VAL ASN VAL THR GLU ASN PHE ASN TRP SEQRES 2 G 317 CYS LYS ASN ASP MET VAL GLU GLN MET HIS GLU ASP ILE SEQRES 3 G 317 CYS SER LEU TRP ASP GLN SER LEU LYS PRO CYS VAL LYS SEQRES 4 G 317 LEU THR PRO LEU CYS VAL GLY ALA GLY SER CYS ASN THR SEQRES 5 G 317 SER VAL ILE THR GLN ALA CYS PRO LYS VAL SER PHE GLU SEQRES 6 G 317 PRO ILE PRO ILE HIS TYR CYS ALA PRO ALA GLY PHE ALA SEQRES 7 G 317 ILE LEU LYS CYS ASN ASN LYS THR PHE ASN GLY THR GLY SEQRES 8 G 317 PRO CYS THR ASN VAL SER THR VAL GLN CYS THR HIS GLY SEQRES 9 G 317 ILE ARG PRO VAL VAL SER SER GLN LEU LEU LEU ASN GLY SEQRES 10 G 317 SER LEU ALA GLU GLU GLU VAL VAL ILE ARG SER CYS ASN SEQRES 11 G 317 PHE THR ASP ASN ALA LYS THR ILE ILE VAL GLN LEU ASN SEQRES 12 G 317 THR SER VAL GLU ILE ASN CYS THR GLY ALA GLY HIS CYS SEQRES 13 G 317 ASN ILE ALA ARG ALA LYS TRP ASN ASN THR LEU LYS GLN SEQRES 14 G 317 ILE ALA SER LYS LEU ARG GLU GLN PHE GLY ASN ASN LYS SEQRES 15 G 317 THR ILE ILE PHE LYS GLN SER SER GLY GLY ASP PRO GLU SEQRES 16 G 317 ILE VAL THR HIS TRP PHE ASN CYS GLY GLY GLU PHE PHE SEQRES 17 G 317 TYR CYS ASN SER THR GLN LEU PHE ASN SER THR TRP PHE SEQRES 18 G 317 ASN SER THR TRP SER THR GLU GLY SER ASN ASN THR GLU SEQRES 19 G 317 GLY SER ASP THR ILE THR LEU PRO CYS ARG ILE LYS GLN SEQRES 20 G 317 ILE ILE ASN MET TRP CYS LYS VAL GLY LYS MET MET TYR SEQRES 21 G 317 ALA PRO PRO ILE SER GLY GLN ILE ARG CYS SER SER ASN SEQRES 22 G 317 ILE THR GLY LEU LEU LEU THR ARG ASP GLY GLY ASN SER SEQRES 23 G 317 ASN ASN GLU SER GLU ILE PHE ARG PRO GLY GLY GLY ASP SEQRES 24 G 317 MET ARG ASP ASN TRP ARG SER GLU LEU TYR LYS TYR LYS SEQRES 25 G 317 VAL VAL LYS ILE GLU SEQRES 1 H 231 GLN VAL GLN LEU VAL GLU SER GLY GLY GLY VAL VAL GLN SEQRES 2 H 231 PRO GLY ARG SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 H 231 PHE THR PHE ARG ASN TYR ALA MET HIS TRP VAL ARG GLN SEQRES 4 H 231 ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA LEU ILE LYS SEQRES 5 H 231 TYR ASP GLY ARG ASN LYS TYR TYR ALA ASP SER VAL LYS SEQRES 6 H 231 GLY ARG PHE SER ILE SER ARG ASP ASN SER LYS ASN THR SEQRES 7 H 231 LEU TYR LEU GLU MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 H 231 ALA VAL TYR TYR CYS ALA ARG ASP ILE GLY LEU LYS GLY SEQRES 9 H 231 GLU HIS TYR ASP ILE LEU THR ALA TYR GLY PRO ASP TYR SEQRES 10 H 231 TRP GLY GLN GLY ALA LEU VAL THR VAL SER SER ALA SER SEQRES 11 H 231 THR LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SER SEQRES 12 H 231 LYS SER THR SER GLY GLY THR ALA ALA LEU GLY CYS LEU SEQRES 13 H 231 VAL LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER TRP SEQRES 14 H 231 ASN SER GLY ALA LEU THR SER GLY VAL HIS THR PHE PRO SEQRES 15 H 231 ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SER SEQRES 16 H 231 VAL VAL THR VAL PRO SER SER SER LEU GLY THR GLN THR SEQRES 17 H 231 TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR LYS SEQRES 18 H 231 VAL ASP LYS LYS ALA GLU PRO LYS SER CYS SEQRES 1 L 215 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 L 215 SER VAL GLY ASP ARG VAL THR ILE THR CYS GLN ALA SER SEQRES 3 L 215 GLN ASP ILE ARG ASN TYR LEU ASN TRP TYR GLN GLN LYS SEQRES 4 L 215 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR ASP ALA SER SEQRES 5 L 215 ASN SER GLU THR GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 215 GLY SER GLY ARG ASP PHE THR PHE THR ILE SER SER LEU SEQRES 7 L 215 GLN PRO GLU ASP VAL ALA THR TYR TYR CYS GLN GLN HIS SEQRES 8 L 215 GLN ASN VAL PRO LEU THR THR PHE GLY GLY GLY THR LYS SEQRES 9 L 215 VAL GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE SEQRES 10 L 215 ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR SEQRES 11 L 215 ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG SEQRES 12 L 215 GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SEQRES 13 L 215 SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER SEQRES 14 L 215 LYS ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SEQRES 15 L 215 SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS SEQRES 16 L 215 GLU VAL THR HIS GLN GLY LEU ARG SER PRO VAL THR LYS SEQRES 17 L 215 SER PHE ASN ARG GLY GLU CYS SEQRES 1 A 317 GLU VAL VAL LEU VAL ASN VAL THR GLU ASN PHE ASN TRP SEQRES 2 A 317 CYS LYS ASN ASP MET VAL GLU GLN MET HIS GLU ASP ILE SEQRES 3 A 317 CYS SER LEU TRP ASP GLN SER LEU LYS PRO CYS VAL LYS SEQRES 4 A 317 LEU THR PRO LEU CYS VAL GLY ALA GLY SER CYS ASN THR SEQRES 5 A 317 SER VAL ILE THR GLN ALA CYS PRO LYS VAL SER PHE GLU SEQRES 6 A 317 PRO ILE PRO ILE HIS TYR CYS ALA PRO ALA GLY PHE ALA SEQRES 7 A 317 ILE LEU LYS CYS ASN ASN LYS THR PHE ASN GLY THR GLY SEQRES 8 A 317 PRO CYS THR ASN VAL SER THR VAL GLN CYS THR HIS GLY SEQRES 9 A 317 ILE ARG PRO VAL VAL SER SER GLN LEU LEU LEU ASN GLY SEQRES 10 A 317 SER LEU ALA GLU GLU GLU VAL VAL ILE ARG SER CYS ASN SEQRES 11 A 317 PHE THR ASP ASN ALA LYS THR ILE ILE VAL GLN LEU ASN SEQRES 12 A 317 THR SER VAL GLU ILE ASN CYS THR GLY ALA GLY HIS CYS SEQRES 13 A 317 ASN ILE ALA ARG ALA LYS TRP ASN ASN THR LEU LYS GLN SEQRES 14 A 317 ILE ALA SER LYS LEU ARG GLU GLN PHE GLY ASN ASN LYS SEQRES 15 A 317 THR ILE ILE PHE LYS GLN SER SER GLY GLY ASP PRO GLU SEQRES 16 A 317 ILE VAL THR HIS TRP PHE ASN CYS GLY GLY GLU PHE PHE SEQRES 17 A 317 TYR CYS ASN SER THR GLN LEU PHE ASN SER THR TRP PHE SEQRES 18 A 317 ASN SER THR TRP SER THR GLU GLY SER ASN ASN THR GLU SEQRES 19 A 317 GLY SER ASP THR ILE THR LEU PRO CYS ARG ILE LYS GLN SEQRES 20 A 317 ILE ILE ASN MET TRP CYS LYS VAL GLY LYS MET MET TYR SEQRES 21 A 317 ALA PRO PRO ILE SER GLY GLN ILE ARG CYS SER SER ASN SEQRES 22 A 317 ILE THR GLY LEU LEU LEU THR ARG ASP GLY GLY ASN SER SEQRES 23 A 317 ASN ASN GLU SER GLU ILE PHE ARG PRO GLY GLY GLY ASP SEQRES 24 A 317 MET ARG ASP ASN TRP ARG SER GLU LEU TYR LYS TYR LYS SEQRES 25 A 317 VAL VAL LYS ILE GLU SEQRES 1 B 231 GLN VAL GLN LEU VAL GLU SER GLY GLY GLY VAL VAL GLN SEQRES 2 B 231 PRO GLY ARG SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 B 231 PHE THR PHE ARG ASN TYR ALA MET HIS TRP VAL ARG GLN SEQRES 4 B 231 ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA LEU ILE LYS SEQRES 5 B 231 TYR ASP GLY ARG ASN LYS TYR TYR ALA ASP SER VAL LYS SEQRES 6 B 231 GLY ARG PHE SER ILE SER ARG ASP ASN SER LYS ASN THR SEQRES 7 B 231 LEU TYR LEU GLU MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 B 231 ALA VAL TYR TYR CYS ALA ARG ASP ILE GLY LEU LYS GLY SEQRES 9 B 231 GLU HIS TYR ASP ILE LEU THR ALA TYR GLY PRO ASP TYR SEQRES 10 B 231 TRP GLY GLN GLY ALA LEU VAL THR VAL SER SER ALA SER SEQRES 11 B 231 THR LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SER SEQRES 12 B 231 LYS SER THR SER GLY GLY THR ALA ALA LEU GLY CYS LEU SEQRES 13 B 231 VAL LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER TRP SEQRES 14 B 231 ASN SER GLY ALA LEU THR SER GLY VAL HIS THR PHE PRO SEQRES 15 B 231 ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SER SEQRES 16 B 231 VAL VAL THR VAL PRO SER SER SER LEU GLY THR GLN THR SEQRES 17 B 231 TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR LYS SEQRES 18 B 231 VAL ASP LYS LYS ALA GLU PRO LYS SER CYS SEQRES 1 C 215 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 C 215 SER VAL GLY ASP ARG VAL THR ILE THR CYS GLN ALA SER SEQRES 3 C 215 GLN ASP ILE ARG ASN TYR LEU ASN TRP TYR GLN GLN LYS SEQRES 4 C 215 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR ASP ALA SER SEQRES 5 C 215 ASN SER GLU THR GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 C 215 GLY SER GLY ARG ASP PHE THR PHE THR ILE SER SER LEU SEQRES 7 C 215 GLN PRO GLU ASP VAL ALA THR TYR TYR CYS GLN GLN HIS SEQRES 8 C 215 GLN ASN VAL PRO LEU THR THR PHE GLY GLY GLY THR LYS SEQRES 9 C 215 VAL GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE SEQRES 10 C 215 ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR SEQRES 11 C 215 ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG SEQRES 12 C 215 GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SEQRES 13 C 215 SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER SEQRES 14 C 215 LYS ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SEQRES 15 C 215 SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS SEQRES 16 C 215 GLU VAL THR HIS GLN GLY LEU ARG SER PRO VAL THR LYS SEQRES 17 C 215 SER PHE ASN ARG GLY GLU CYS MODRES 3IDY ASN G 88 ASN GLYCOSYLATION SITE MODRES 3IDY ASN G 230 ASN GLYCOSYLATION SITE MODRES 3IDY ASN G 234 ASN GLYCOSYLATION SITE MODRES 3IDY ASN G 241 ASN GLYCOSYLATION SITE MODRES 3IDY ASN G 262 ASN GLYCOSYLATION SITE MODRES 3IDY ASN G 276 ASN GLYCOSYLATION SITE MODRES 3IDY ASN G 289 ASN GLYCOSYLATION SITE MODRES 3IDY ASN G 295 ASN GLYCOSYLATION SITE MODRES 3IDY ASN G 339 ASN GLYCOSYLATION SITE MODRES 3IDY ASN G 356 ASN GLYCOSYLATION SITE MODRES 3IDY ASN G 386 ASN GLYCOSYLATION SITE MODRES 3IDY ASN G 392 ASN GLYCOSYLATION SITE MODRES 3IDY ASN G 448 ASN GLYCOSYLATION SITE MODRES 3IDY ASN G 463 ASN GLYCOSYLATION SITE MODRES 3IDY ASN A 88 ASN GLYCOSYLATION SITE MODRES 3IDY ASN A 230 ASN GLYCOSYLATION SITE MODRES 3IDY ASN A 234 ASN GLYCOSYLATION SITE MODRES 3IDY ASN A 241 ASN GLYCOSYLATION SITE MODRES 3IDY ASN A 262 ASN GLYCOSYLATION SITE MODRES 3IDY ASN A 276 ASN GLYCOSYLATION SITE MODRES 3IDY ASN A 289 ASN GLYCOSYLATION SITE MODRES 3IDY ASN A 295 ASN GLYCOSYLATION SITE MODRES 3IDY ASN A 339 ASN GLYCOSYLATION SITE MODRES 3IDY ASN A 356 ASN GLYCOSYLATION SITE MODRES 3IDY ASN A 386 ASN GLYCOSYLATION SITE MODRES 3IDY ASN A 392 ASN GLYCOSYLATION SITE MODRES 3IDY ASN A 448 ASN GLYCOSYLATION SITE MODRES 3IDY ASN A 463 ASN GLYCOSYLATION SITE HET NAG G 588 14 HET NAG G 730 14 HET NAG G 734 14 HET NAG G 741 14 HET NAG G 762 14 HET NAG G 776 14 HET NAG G 789 14 HET NAG G 795 14 HET NAG G 839 14 HET NAG G 856 14 HET NAG G 886 14 HET NAG G 892 14 HET NAG G 948 14 HET NAG G 963 14 HET SO4 G1003 5 HET NAG A 588 14 HET NAG A 730 14 HET NAG A 734 14 HET NAG A 741 14 HET NAG A 762 14 HET NAG A 776 14 HET NAG A 789 14 HET NAG A 795 14 HET NAG A 839 14 HET NAG A 856 14 HET NAG A 886 14 HET NAG A 892 14 HET NAG A 948 14 HET NAG A 963 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM SO4 SULFATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 7 NAG 28(C8 H15 N O6) FORMUL 21 SO4 O4 S 2- FORMUL 36 HOH *152(H2 O) HELIX 1 1 ASN G 94 LYS G 97 5 4 HELIX 2 2 ASN G 98 ASP G 107 1 10 HELIX 3 3 ARG G 335 GLU G 351 1 17 HELIX 4 4 ASP G 368 THR G 373 1 6 HELIX 5 5 ILE G 424 TRP G 427 5 4 HELIX 6 6 ASP G 474 TYR G 484 1 11 HELIX 7 7 THR H 28 TYR H 32 5 5 HELIX 8 8 ARG H 83 THR H 87 5 5 HELIX 9 9 SER H 156 ALA H 158 5 3 HELIX 10 10 SER H 187 LEU H 189 5 3 HELIX 11 11 HIS H 200 ASN H 204 5 5 HELIX 12 12 GLN L 79 VAL L 83 5 5 HELIX 13 13 SER L 121 GLY L 128 1 8 HELIX 14 14 LYS L 183 HIS L 189 1 7 HELIX 15 15 ASN A 94 LYS A 97 5 4 HELIX 16 16 ASN A 98 ASP A 107 1 10 HELIX 17 17 ARG A 335 GLU A 351 1 17 HELIX 18 18 ASP A 368 THR A 373 1 6 HELIX 19 19 ILE A 424 TRP A 427 5 4 HELIX 20 20 ASP A 474 TYR A 484 1 11 HELIX 21 21 THR B 28 TYR B 32 5 5 HELIX 22 22 ARG B 83 THR B 87 5 5 HELIX 23 23 SER B 156 ALA B 158 5 3 HELIX 24 24 SER B 187 LEU B 189 5 3 HELIX 25 25 HIS B 200 ASN B 204 5 5 HELIX 26 26 GLN C 79 VAL C 83 5 5 HELIX 27 27 SER C 121 GLY C 128 1 8 HELIX 28 28 LYS C 183 HIS C 189 1 7 SHEET 1 A 4 VAL G 84 LEU G 86 0 SHEET 2 A 4 VAL G 242 VAL G 245 -1 O THR G 244 N VAL G 84 SHEET 3 A 4 PHE G 223 CYS G 228 -1 N LYS G 227 O SER G 243 SHEET 4 A 4 TYR G 486 LYS G 490 -1 O VAL G 489 N ALA G 224 SHEET 1 B 2 GLU G 91 PHE G 93 0 SHEET 2 B 2 GLY G 237 CYS G 239 -1 O GLY G 237 N PHE G 93 SHEET 1 C 2 TRP G 112 SER G 115 0 SHEET 2 C 2 SER G 209 PRO G 212 -1 O GLU G 211 N ASP G 113 SHEET 1 D 2 CYS G 119 LEU G 125 0 SHEET 2 D 2 THR G 198 ALA G 204 -1 O ALA G 204 N CYS G 119 SHEET 1 E 7 LEU G 259 LEU G 261 0 SHEET 2 E 7 SER G 447 ASP G 457 -1 O THR G 450 N LEU G 260 SHEET 3 E 7 ILE G 284 THR G 297 -1 N ILE G 284 O LEU G 454 SHEET 4 E 7 HIS G 330 ALA G 334 -1 O ASN G 332 N ASN G 295 SHEET 5 E 7 THR G 413 GLN G 422 -1 O LEU G 416 N CYS G 331 SHEET 6 E 7 GLU G 381 CYS G 385 -1 N PHE G 382 O LYS G 421 SHEET 7 E 7 HIS G 374 CYS G 378 -1 N HIS G 374 O CYS G 385 SHEET 1 F 6 VAL G 271 SER G 274 0 SHEET 2 F 6 ILE G 284 THR G 297 -1 O ILE G 285 N ARG G 273 SHEET 3 F 6 SER G 447 ASP G 457 -1 O LEU G 454 N ILE G 284 SHEET 4 F 6 SER G 465 PRO G 470 -1 O ILE G 467 N ASP G 457 SHEET 5 F 6 THR G 358 PHE G 361 1 N ILE G 360 O PHE G 468 SHEET 6 F 6 SER G 393 TRP G 395 -1 O SER G 393 N PHE G 361 SHEET 1 G 2 CYS G 428 VAL G 430 0 SHEET 2 G 2 MET G 433 TYR G 435 -1 O TYR G 435 N CYS G 428 SHEET 1 H 4 GLN H 3 SER H 7 0 SHEET 2 H 4 LEU H 18 SER H 25 -1 O SER H 21 N SER H 7 SHEET 3 H 4 THR H 77 MET H 82 -1 O MET H 82 N LEU H 18 SHEET 4 H 4 PHE H 67 ASP H 72 -1 N SER H 68 O GLU H 81 SHEET 1 I 6 GLY H 10 VAL H 11 0 SHEET 2 I 6 ALA H 107 THR H 110 1 O THR H 110 N GLY H 10 SHEET 3 I 6 ALA H 88 ASP H 95 -1 N ALA H 88 O VAL H 109 SHEET 4 I 6 MET H 34 GLN H 39 -1 N VAL H 37 O TYR H 91 SHEET 5 I 6 GLU H 46 ILE H 51 -1 O ALA H 49 N TRP H 36 SHEET 6 I 6 LYS H 57 TYR H 59 -1 O TYR H 58 N LEU H 50 SHEET 1 J 4 GLY H 10 VAL H 11 0 SHEET 2 J 4 ALA H 107 THR H 110 1 O THR H 110 N GLY H 10 SHEET 3 J 4 ALA H 88 ASP H 95 -1 N ALA H 88 O VAL H 109 SHEET 4 J 4 PRO H 100K TRP H 103 -1 O ASP H 101 N ARG H 94 SHEET 1 K 4 SER H 120 LEU H 124 0 SHEET 2 K 4 THR H 135 TYR H 145 -1 O GLY H 139 N LEU H 124 SHEET 3 K 4 TYR H 176 PRO H 185 -1 O VAL H 184 N ALA H 136 SHEET 4 K 4 HIS H 164 THR H 165 -1 N HIS H 164 O VAL H 181 SHEET 1 L 3 SER H 153 TRP H 154 0 SHEET 2 L 3 TYR H 194 ASN H 197 -1 O ASN H 197 N SER H 153 SHEET 3 L 3 ASP H 208 ALA H 211 -1 O LYS H 209 N CYS H 196 SHEET 1 M 4 MET L 4 SER L 7 0 SHEET 2 M 4 VAL L 19 ALA L 25 -1 O THR L 22 N SER L 7 SHEET 3 M 4 ASP L 70 ILE L 75 -1 O PHE L 71 N CYS L 23 SHEET 4 M 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 N 6 SER L 10 SER L 14 0 SHEET 2 N 6 THR L 102 LYS L 107 1 O GLU L 105 N LEU L 11 SHEET 3 N 6 THR L 85 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 N 6 LEU L 33 GLN L 38 -1 N TYR L 36 O TYR L 87 SHEET 5 N 6 LYS L 45 TYR L 49 -1 O ILE L 48 N TRP L 35 SHEET 6 N 6 ASN L 53 SER L 54 -1 O ASN L 53 N TYR L 49 SHEET 1 O 4 SER L 114 PHE L 118 0 SHEET 2 O 4 THR L 129 PHE L 139 -1 O LEU L 135 N PHE L 116 SHEET 3 O 4 TYR L 173 SER L 182 -1 O LEU L 179 N VAL L 132 SHEET 4 O 4 SER L 159 VAL L 163 -1 N GLN L 160 O THR L 178 SHEET 1 P 3 ALA L 144 VAL L 150 0 SHEET 2 P 3 TYR L 192 HIS L 198 -1 O ALA L 193 N LYS L 149 SHEET 3 P 3 VAL L 205 THR L 206 -1 O VAL L 205 N VAL L 196 SHEET 1 Q 4 VAL A 84 LEU A 86 0 SHEET 2 Q 4 VAL A 242 VAL A 245 -1 O THR A 244 N VAL A 84 SHEET 3 Q 4 PHE A 223 CYS A 228 -1 N LYS A 227 O SER A 243 SHEET 4 Q 4 TYR A 486 LYS A 490 -1 O LYS A 487 N LEU A 226 SHEET 1 R 2 GLU A 91 PHE A 93 0 SHEET 2 R 2 GLY A 237 CYS A 239 -1 O GLY A 237 N PHE A 93 SHEET 1 S 2 TRP A 112 LEU A 116 0 SHEET 2 S 2 VAL A 208 PRO A 212 -1 O GLU A 211 N ASP A 113 SHEET 1 T 2 VAL A 120 LEU A 125 0 SHEET 2 T 2 THR A 198 GLN A 203 -1 O THR A 202 N LYS A 121 SHEET 1 U 7 LEU A 259 LEU A 261 0 SHEET 2 U 7 SER A 447 ASP A 457 -1 O THR A 450 N LEU A 260 SHEET 3 U 7 ILE A 284 THR A 297 -1 N ILE A 284 O LEU A 454 SHEET 4 U 7 HIS A 330 ALA A 334 -1 O ASN A 332 N ASN A 295 SHEET 5 U 7 THR A 413 GLN A 422 -1 O LEU A 416 N CYS A 331 SHEET 6 U 7 GLU A 381 CYS A 385 -1 N PHE A 382 O LYS A 421 SHEET 7 U 7 HIS A 374 CYS A 378 -1 N HIS A 374 O CYS A 385 SHEET 1 V 6 VAL A 271 SER A 274 0 SHEET 2 V 6 ILE A 284 THR A 297 -1 O ILE A 285 N ARG A 273 SHEET 3 V 6 SER A 447 ASP A 457 -1 O LEU A 454 N ILE A 284 SHEET 4 V 6 SER A 465 PRO A 470 -1 O ILE A 467 N ASP A 457 SHEET 5 V 6 THR A 358 PHE A 361 1 N ILE A 360 O PHE A 468 SHEET 6 V 6 SER A 393 TRP A 395 -1 O SER A 393 N PHE A 361 SHEET 1 W 2 CYS A 428 VAL A 430 0 SHEET 2 W 2 MET A 433 TYR A 435 -1 O TYR A 435 N CYS A 428 SHEET 1 X 4 GLN B 3 SER B 7 0 SHEET 2 X 4 LEU B 18 SER B 25 -1 O SER B 25 N GLN B 3 SHEET 3 X 4 THR B 77 MET B 82 -1 O MET B 82 N LEU B 18 SHEET 4 X 4 PHE B 67 ASP B 72 -1 N SER B 68 O GLU B 81 SHEET 1 Y 6 GLY B 10 VAL B 11 0 SHEET 2 Y 6 LEU B 108 THR B 110 1 O THR B 110 N GLY B 10 SHEET 3 Y 6 ALA B 88 ASP B 95 -1 N ALA B 88 O VAL B 109 SHEET 4 Y 6 MET B 34 GLN B 39 -1 N VAL B 37 O TYR B 91 SHEET 5 Y 6 GLU B 46 ILE B 51 -1 O ALA B 49 N TRP B 36 SHEET 6 Y 6 LYS B 57 TYR B 59 -1 O TYR B 58 N LEU B 50 SHEET 1 Z 4 GLY B 10 VAL B 11 0 SHEET 2 Z 4 LEU B 108 THR B 110 1 O THR B 110 N GLY B 10 SHEET 3 Z 4 ALA B 88 ASP B 95 -1 N ALA B 88 O VAL B 109 SHEET 4 Z 4 PRO B 100K TRP B 103 -1 O TYR B 102 N ARG B 94 SHEET 1 AA 4 SER B 120 LEU B 124 0 SHEET 2 AA 4 THR B 135 TYR B 145 -1 O LYS B 143 N SER B 120 SHEET 3 AA 4 TYR B 176 PRO B 185 -1 O VAL B 184 N ALA B 136 SHEET 4 AA 4 HIS B 164 THR B 165 -1 N HIS B 164 O VAL B 181 SHEET 1 AB 3 SER B 153 TRP B 154 0 SHEET 2 AB 3 TYR B 194 ASN B 197 -1 O ASN B 197 N SER B 153 SHEET 3 AB 3 ASP B 208 ALA B 211 -1 O LYS B 209 N CYS B 196 SHEET 1 AC 4 MET C 4 SER C 7 0 SHEET 2 AC 4 VAL C 19 ALA C 25 -1 O THR C 22 N SER C 7 SHEET 3 AC 4 ASP C 70 ILE C 75 -1 O PHE C 71 N CYS C 23 SHEET 4 AC 4 PHE C 62 SER C 67 -1 N SER C 63 O THR C 74 SHEET 1 AD 6 SER C 10 SER C 14 0 SHEET 2 AD 6 THR C 102 LYS C 107 1 O GLU C 105 N LEU C 11 SHEET 3 AD 6 THR C 85 GLN C 90 -1 N TYR C 86 O THR C 102 SHEET 4 AD 6 LEU C 33 GLN C 38 -1 N TYR C 36 O TYR C 87 SHEET 5 AD 6 LYS C 45 TYR C 49 -1 O ILE C 48 N TRP C 35 SHEET 6 AD 6 ASN C 53 SER C 54 -1 O ASN C 53 N TYR C 49 SHEET 1 AE 4 SER C 114 PHE C 118 0 SHEET 2 AE 4 THR C 129 PHE C 139 -1 O LEU C 135 N PHE C 116 SHEET 3 AE 4 TYR C 173 SER C 182 -1 O LEU C 179 N VAL C 132 SHEET 4 AE 4 SER C 159 VAL C 163 -1 N GLN C 160 O THR C 178 SHEET 1 AF 3 ALA C 144 VAL C 150 0 SHEET 2 AF 3 TYR C 192 HIS C 198 -1 O ALA C 193 N LYS C 149 SHEET 3 AF 3 VAL C 205 THR C 206 -1 O VAL C 205 N VAL C 196 SSBOND 1 CYS G 96 CYS G 275 1555 1555 2.04 SSBOND 2 CYS G 109 CYS G 428 1555 1555 2.04 SSBOND 3 CYS G 119 CYS G 205 1555 1555 2.04 SSBOND 4 CYS G 126 CYS G 196 1555 1555 2.03 SSBOND 5 CYS G 218 CYS G 247 1555 1555 2.03 SSBOND 6 CYS G 228 CYS G 239 1555 1555 2.04 SSBOND 7 CYS G 296 CYS G 331 1555 1555 2.03 SSBOND 8 CYS G 378 CYS G 445 1555 1555 2.03 SSBOND 9 CYS G 385 CYS G 418 1555 1555 2.03 SSBOND 10 CYS H 22 CYS H 92 1555 1555 2.03 SSBOND 11 CYS H 140 CYS H 196 1555 1555 2.03 SSBOND 12 CYS L 23 CYS L 88 1555 1555 2.04 SSBOND 13 CYS L 134 CYS L 194 1555 1555 2.03 SSBOND 14 CYS A 96 CYS A 275 1555 1555 2.03 SSBOND 15 CYS A 109 CYS A 428 1555 1555 2.03 SSBOND 16 CYS A 119 CYS A 205 1555 1555 2.03 SSBOND 17 CYS A 126 CYS A 196 1555 1555 2.04 SSBOND 18 CYS A 218 CYS A 247 1555 1555 2.03 SSBOND 19 CYS A 228 CYS A 239 1555 1555 2.03 SSBOND 20 CYS A 296 CYS A 331 1555 1555 2.03 SSBOND 21 CYS A 378 CYS A 445 1555 1555 2.03 SSBOND 22 CYS A 385 CYS A 418 1555 1555 2.03 SSBOND 23 CYS B 22 CYS B 92 1555 1555 2.04 SSBOND 24 CYS B 140 CYS B 196 1555 1555 2.03 SSBOND 25 CYS C 23 CYS C 88 1555 1555 2.04 SSBOND 26 CYS C 134 CYS C 194 1555 1555 2.03 LINK ND2 ASN G 88 C1 NAG G 588 1555 1555 1.44 LINK ND2 ASN G 230 C1 NAG G 730 1555 1555 1.44 LINK ND2 ASN G 234 C1 NAG G 734 1555 1555 1.44 LINK ND2 ASN G 241 C1 NAG G 741 1555 1555 1.44 LINK ND2 ASN G 262 C1 NAG G 762 1555 1555 1.43 LINK ND2 ASN G 276 C1 NAG G 776 1555 1555 1.44 LINK ND2 ASN G 289 C1 NAG G 789 1555 1555 1.44 LINK ND2 ASN G 295 C1 NAG G 795 1555 1555 1.44 LINK ND2 ASN G 339 C1 NAG G 839 1555 1555 1.44 LINK ND2 ASN G 356 C1 NAG G 856 1555 1555 1.44 LINK ND2 ASN G 386 C1 NAG G 886 1555 1555 1.44 LINK ND2 ASN G 392 C1 NAG G 892 1555 1555 1.44 LINK ND2 ASN G 448 C1 NAG G 948 1555 1555 1.44 LINK ND2 ASN G 463 C1 NAG G 963 1555 1555 1.43 LINK ND2 ASN A 88 C1 NAG A 588 1555 1555 1.44 LINK ND2 ASN A 230 C1 NAG A 730 1555 1555 1.44 LINK ND2 ASN A 234 C1 NAG A 734 1555 1555 1.44 LINK ND2 ASN A 241 C1 NAG A 741 1555 1555 1.44 LINK ND2 ASN A 262 C1 NAG A 762 1555 1555 1.44 LINK ND2 ASN A 276 C1 NAG A 776 1555 1555 1.44 LINK ND2 ASN A 289 C1 NAG A 789 1555 1555 1.44 LINK ND2 ASN A 295 C1 NAG A 795 1555 1555 1.44 LINK ND2 ASN A 339 C1 NAG A 839 1555 1555 1.44 LINK ND2 ASN A 356 C1 NAG A 856 1555 1555 1.45 LINK ND2 ASN A 386 C1 NAG A 886 1555 1555 1.43 LINK ND2 ASN A 392 C1 NAG A 892 1555 1555 1.44 LINK ND2 ASN A 448 C1 NAG A 948 1555 1555 1.44 LINK ND2 ASN A 463 C1 NAG A 963 1555 1555 1.44 CISPEP 1 PHE H 146 PRO H 147 0 -5.51 CISPEP 2 GLU H 148 PRO H 149 0 -3.34 CISPEP 3 SER L 7 PRO L 8 0 1.84 CISPEP 4 VAL L 94 PRO L 95 0 5.55 CISPEP 5 TYR L 140 PRO L 141 0 2.04 CISPEP 6 PHE B 146 PRO B 147 0 -5.64 CISPEP 7 GLU B 148 PRO B 149 0 -3.58 CISPEP 8 SER C 7 PRO C 8 0 1.01 CISPEP 9 VAL C 94 PRO C 95 0 6.08 CISPEP 10 TYR C 140 PRO C 141 0 2.08 CRYST1 106.168 204.316 216.886 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009419 0.000000 0.000000 0.00000 SCALE2 0.000000 0.004894 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004611 0.00000