HEADER HYDROLASE 22-JUL-09 3IEH TITLE CRYSTAL STRUCTURE OF PUTATIVE METALLOPEPTIDASE (YP_001051774.1) FROM TITLE 2 SHEWANELLA BALTICA OS155 AT 2.45 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE METALLOPEPTIDASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SHEWANELLA BALTICA OS155; SOURCE 3 ORGANISM_TAXID: 325240; SOURCE 4 GENE: SBAL_3428, YP_001051774.1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS YP_001051774.1, PUTATIVE METALLOPEPTIDASE, STRUCTURAL GENOMICS, JOINT KEYWDS 2 CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, KEYWDS 3 PSI-2, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 5 01-FEB-23 3IEH 1 REMARK SEQADV REVDAT 4 24-JUL-19 3IEH 1 REMARK LINK REVDAT 3 25-OCT-17 3IEH 1 REMARK REVDAT 2 13-JUL-11 3IEH 1 VERSN REVDAT 1 04-AUG-09 3IEH 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF PUTATIVE METALLOPEPTIDASE JRNL TITL 2 (YP_001051774.1) FROM SHEWANELLA BALTICA OS155 AT 2.45 A JRNL TITL 3 RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0053 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.78 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 12072 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 578 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.45 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.51 REMARK 3 REFLECTION IN BIN (WORKING SET) : 841 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.77 REMARK 3 BIN R VALUE (WORKING SET) : 0.1780 REMARK 3 BIN FREE R VALUE SET COUNT : 41 REMARK 3 BIN FREE R VALUE : 0.2500 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2053 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 83 REMARK 3 SOLVENT ATOMS : 66 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 34.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.22 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.72000 REMARK 3 B22 (A**2) : -0.72000 REMARK 3 B33 (A**2) : 1.08000 REMARK 3 B12 (A**2) : -0.36000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.372 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.243 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.151 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.061 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.907 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2175 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1508 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2922 ; 1.494 ; 1.982 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3657 ; 0.894 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 269 ; 4.902 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 96 ;32.073 ;23.750 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 329 ;13.682 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;14.713 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 313 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2398 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 452 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1332 ; 1.648 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 545 ; 0.372 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2127 ; 3.001 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 843 ; 5.191 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 794 ; 7.179 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 271 REMARK 3 ORIGIN FOR THE GROUP (A): 17.9469 39.8202 6.1579 REMARK 3 T TENSOR REMARK 3 T11: 0.0191 T22: 0.0220 REMARK 3 T33: 0.0293 T12: 0.0145 REMARK 3 T13: 0.0193 T23: 0.0202 REMARK 3 L TENSOR REMARK 3 L11: 1.2437 L22: 1.0315 REMARK 3 L33: 0.7003 L12: 0.0104 REMARK 3 L13: -0.0714 L23: 0.0367 REMARK 3 S TENSOR REMARK 3 S11: -0.0683 S12: 0.0283 S13: -0.0551 REMARK 3 S21: -0.0437 S22: -0.0052 S23: -0.0159 REMARK 3 S31: 0.0117 S32: 0.0528 S33: 0.0735 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1.HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2.ATOM RECORDS CONTAIN RESIDUAL B FACTORS REMARK 3 ONLY. 3.A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE REMARK 3 ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED REMARK 3 SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4.ZINC (ZN) REMARK 3 THAT WAS USED IN CO-CRYSTALLIZATION HAS BEEN MODELED AT THE REMARK 3 PUTATIVE ACTIVE SITE BASED ON CLEAR ELECTRON DENSITY IN THE REMARK 3 ANOMALOUS DIFFERENCE FOURIER MAP. 5.AN UNIDENTIFIED LIGAND (UNL) REMARK 3 HAS BEEN MODELED AT THE PUTATIVE ACTIVE SITE. 6.GLYCEROL (GOL) REMARK 3 AND PEG FRAGMENTS (PEG AND PGE) FROM THE CRYSTALLIZATION REMARK 3 SOLUTION HAVE BEEN MODELED IN THE SOLVENT STRUCTURE. REMARK 4 REMARK 4 3IEH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-JUL-09. REMARK 100 THE DEPOSITION ID IS D_1000054310. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-APR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97845,0.97752,0.91837 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR (HORIZONTAL REMARK 200 FOCUSING) REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.5 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12080 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450 REMARK 200 RESOLUTION RANGE LOW (A) : 29.775 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.600 REMARK 200 R MERGE (I) : 0.16600 REMARK 200 R SYM (I) : 0.16600 REMARK 200 FOR THE DATA SET : 11.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.51 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 7.60 REMARK 200 R MERGE FOR SHELL (I) : 0.75700 REMARK 200 R SYM FOR SHELL (I) : 0.75700 REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10.0000% GLYCEROL, 5.0000% PEG-1000, REMARK 280 30.0000% PEG-600, 0.1M MES PH 6.0, ADDITIVE: 0.006 M ZINC REMARK 280 CHLORIDE, NANODROP', VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.62667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 29.31333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 43.97000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 14.65667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 73.28333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CRYSTAL PACKING ANALYSIS AND ANALYTICAL SIZE-EXCLUSION REMARK 300 CHROMATOGRAPHY COUPLED WITH STATIC LIGHT SCATTERING SUPPORT THE REMARK 300 ASSIGNMENT OF A MONOMER AS THE SIGNIFICANT OLIGOMERIC FORM IN REMARK 300 SOLUTION. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MSE A 1 REMARK 465 VAL A 2 REMARK 465 SER A 3 REMARK 465 PRO A 272 REMARK 465 LEU A 273 REMARK 465 CYS A 274 REMARK 465 ASP A 275 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 4 CB CG CD NE CZ NH1 NH2 REMARK 470 GLU A 32 CD OE1 OE2 REMARK 470 GLN A 33 CD OE1 NE2 REMARK 470 GLU A 47 CD OE1 OE2 REMARK 470 LYS A 52 CE NZ REMARK 470 ASP A 95 CG OD1 OD2 REMARK 470 LYS A 138 CD CE NZ REMARK 470 GLN A 155 CD OE1 NE2 REMARK 470 GLN A 186 CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 6 0.34 -68.60 REMARK 500 ASP A 23 76.48 -68.33 REMARK 500 LYS A 50 -6.50 81.75 REMARK 500 ALA A 60 61.97 62.91 REMARK 500 GLU A 78 57.43 -101.38 REMARK 500 ASP A 212 -142.95 67.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 276 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 75 ND1 REMARK 620 2 GLU A 78 OE1 103.8 REMARK 620 3 HOH A 354 O 128.9 125.4 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 276 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNL A 277 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 278 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 279 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 280 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 281 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 282 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 283 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 284 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 285 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 286 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 287 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 288 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 375157 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 3IEH A 1 275 UNP A3D842 A3D842_SHEB5 1 275 SEQADV 3IEH GLY A 0 UNP A3D842 EXPRESSION TAG SEQRES 1 A 276 GLY MSE VAL SER ARG SER PRO PHE GLU SER PHE GLN TRP SEQRES 2 A 276 LYS SER ASP ILE PHE ASN CYS GLU SER THR ASP ILE ASP SEQRES 3 A 276 ASN PHE TYR LEU LEU LEU GLU GLN GLU MSE THR ARG LEU SEQRES 4 A 276 GLY MSE VAL GLU LYS ASN LEU GLY GLU VAL GLY LYS TYR SEQRES 5 A 276 LYS VAL SER LEU TYR GLN SER PRO ALA ALA LYS SER GLY SEQRES 6 A 276 LEU PRO SER LEU LEU ILE SER ALA GLY PHE HIS GLY GLU SEQRES 7 A 276 GLU SER ALA GLY PRO TRP GLY LEU LEU HIS PHE LEU SER SEQRES 8 A 276 GLU ALA SER ALA ASP LEU PHE GLU ARG VAL ASN LEU SER SEQRES 9 A 276 LEU LEU PRO LEU VAL ASN PRO THR GLY PHE SER ARG GLY SEQRES 10 A 276 HIS ARG PHE ASN LYS TYR GLY GLU ASN PRO ASN ARG GLY SEQRES 11 A 276 PHE VAL PHE GLU ASN GLY LYS PRO LYS ALA ASN GLU HIS SEQRES 12 A 276 THR SER VAL GLU GLY LYS LEU LEU LEU ASP HIS ALA GLN SEQRES 13 A 276 LEU LEU ILE ALA ALA CYS ARG ASP GLY ILE LEU THR CYS SEQRES 14 A 276 HIS GLU ASP VAL LEU SER ARG GLU ALA TYR VAL TYR SER SEQRES 15 A 276 PHE GLU PRO SER GLN VAL PRO GLY ARG PHE SER LEU ASP SEQRES 16 A 276 LEU ARG ASP THR LEU GLY GLY TYR PHE PRO ILE ALA VAL SEQRES 17 A 276 ASP GLY GLU ILE ASP ALA CYS PRO VAL LYS ASP GLY LEU SEQRES 18 A 276 ILE PHE ASN HIS PHE ASP THR SER PHE GLU ALA CYS LEU SEQRES 19 A 276 VAL ARG SER GLY ALA ARG VAL GLY ALA CYS THR GLU THR SEQRES 20 A 276 PRO ALA LEU GLN ASN PHE ASP GLN ARG VAL LEU ALA ASN SEQRES 21 A 276 SER ALA ALA MSE THR HIS PHE LEU ALA LEU CYS ALA PRO SEQRES 22 A 276 LEU CYS ASP MODRES 3IEH MSE A 35 MET SELENOMETHIONINE MODRES 3IEH MSE A 40 MET SELENOMETHIONINE MODRES 3IEH MSE A 263 MET SELENOMETHIONINE HET MSE A 35 8 HET MSE A 40 8 HET MSE A 263 8 HET ZN A 276 1 HET UNL A 277 5 HET GOL A 278 6 HET GOL A 279 6 HET GOL A 280 6 HET GOL A 281 6 HET GOL A 282 6 HET GOL A 283 6 HET PEG A 284 7 HET PEG A 285 7 HET PEG A 286 7 HET PGE A 287 10 HET PGE A 288 10 HETNAM MSE SELENOMETHIONINE HETNAM ZN ZINC ION HETNAM UNL UNKNOWN LIGAND HETNAM GOL GLYCEROL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM PGE TRIETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 3(C5 H11 N O2 SE) FORMUL 2 ZN ZN 2+ FORMUL 4 GOL 6(C3 H8 O3) FORMUL 10 PEG 3(C4 H10 O3) FORMUL 13 PGE 2(C6 H14 O4) FORMUL 15 HOH *66(H2 O) HELIX 1 1 ASP A 23 GLY A 39 1 17 HELIX 2 2 SER A 79 GLU A 91 1 13 HELIX 3 3 SER A 93 ARG A 99 5 7 HELIX 4 4 ASN A 109 GLY A 116 1 8 HELIX 5 5 SER A 144 ASP A 152 1 9 HELIX 6 6 HIS A 153 ARG A 162 1 10 HELIX 7 7 GLY A 189 GLY A 201 1 13 HELIX 8 8 SER A 228 GLY A 237 1 10 HELIX 9 9 ASN A 251 ALA A 271 1 21 SHEET 1 A 2 LYS A 13 SER A 14 0 SHEET 2 A 2 CYS A 19 GLU A 20 -1 O CYS A 19 N SER A 14 SHEET 1 B 8 VAL A 41 VAL A 48 0 SHEET 2 B 8 TYR A 51 GLN A 57 -1 O GLN A 57 N VAL A 41 SHEET 3 B 8 ASN A 101 LEU A 105 -1 O LEU A 104 N TYR A 56 SHEET 4 B 8 SER A 67 ALA A 72 1 N LEU A 68 O SER A 103 SHEET 5 B 8 GLY A 164 ASP A 171 1 O LEU A 166 N LEU A 69 SHEET 6 B 8 GLY A 241 PRO A 247 1 O ALA A 242 N THR A 167 SHEET 7 B 8 TYR A 178 PHE A 182 -1 N TYR A 180 O CYS A 243 SHEET 8 B 8 LEU A 220 PHE A 222 1 O ILE A 221 N SER A 181 SHEET 1 C 2 VAL A 131 GLU A 133 0 SHEET 2 C 2 LYS A 136 LYS A 138 -1 O LYS A 138 N VAL A 131 SHEET 1 D 2 GLU A 210 ILE A 211 0 SHEET 2 D 2 CYS A 214 PRO A 215 -1 O CYS A 214 N ILE A 211 LINK C GLU A 34 N MSE A 35 1555 1555 1.33 LINK C MSE A 35 N THR A 36 1555 1555 1.34 LINK C GLY A 39 N MSE A 40 1555 1555 1.33 LINK C MSE A 40 N VAL A 41 1555 1555 1.32 LINK C ALA A 262 N MSE A 263 1555 1555 1.33 LINK C MSE A 263 N THR A 264 1555 1555 1.33 LINK ND1 HIS A 75 ZN ZN A 276 1555 1555 2.13 LINK OE1 GLU A 78 ZN ZN A 276 1555 1555 2.26 LINK ZN ZN A 276 O HOH A 354 1555 1555 2.31 SITE 1 AC1 4 HIS A 75 GLU A 78 HIS A 169 HOH A 354 SITE 1 AC2 6 HIS A 75 ASN A 127 TYR A 180 ASP A 226 SITE 2 AC2 6 SER A 228 GLU A 230 SITE 1 AC3 4 LYS A 121 TYR A 122 GLY A 209 GLU A 210 SITE 1 AC4 4 ASP A 152 HIS A 153 GLN A 155 LEU A 156 SITE 1 AC5 4 ASP A 194 THR A 198 HIS A 265 HOH A 315 SITE 1 AC6 5 GLU A 91 TYR A 202 LEU A 257 SER A 260 SITE 2 AC6 5 ALA A 261 SITE 1 AC7 5 GLU A 183 PRO A 184 VAL A 234 ALA A 238 SITE 2 AC7 5 ARG A 239 SITE 1 AC8 5 PHE A 130 PHE A 132 ASP A 226 CYS A 232 SITE 2 AC8 5 ARG A 235 SITE 1 AC9 2 LYS A 217 LEU A 220 SITE 1 BC1 4 LYS A 13 ASN A 18 CYS A 19 GLU A 20 SITE 1 BC2 5 SER A 9 GLN A 11 SER A 114 VAL A 207 SITE 2 BC2 5 ASP A 218 SITE 1 BC3 6 PHE A 10 GLN A 11 TRP A 12 ALA A 248 SITE 2 BC3 6 LEU A 249 GLN A 250 SITE 1 BC4 6 LYS A 62 GLU A 98 TYR A 122 ARG A 175 SITE 2 BC4 6 LEU A 249 GLN A 250 CRYST1 80.958 80.958 87.940 90.00 90.00 120.00 P 65 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012352 0.007131 0.000000 0.00000 SCALE2 0.000000 0.014263 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011371 0.00000